debian/0000755000000000000000000000000011423036505007165 5ustar debian/source/0000755000000000000000000000000011421572554010474 5ustar debian/source/format0000644000000000000000000000001411421572554011702 0ustar 3.0 (quilt) debian/compat0000644000000000000000000000000211421572554010372 0ustar 7 debian/libgiftiio-dev.install0000644000000000000000000000004411421572554013457 0ustar usr/include/gifti usr/lib/*.{so,a} debian/copyright0000644000000000000000000000111411421572554011124 0ustar Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat Upstream-Name: gifticlib Upstream-Source: http://www.nitrc.org/projects/gifti Files: * Copyright: none License: other gifticlib was written by Richard Reynolds, SSCC, DIRP, NIMH, National Institutes of Health. Richard Reynold disclaims all copyright in gifticlib and places it in the public domain. Files: debian/* Copyright: Copyright 2010 Michael Hanke License: BSD On Debian systems the full text of the BSD License can be found in the `/usr/share/common-licenses/BSD' file. debian/control0000644000000000000000000000335111421573310010570 0ustar Source: gifticlib Priority: optional Maintainer: NeuroDebian Team Uploaders: Michael Hanke , Yaroslav Halchenko Build-Depends: debhelper (>= 7.0.50~), cmake, zlib1g-dev, libnifti-dev, libexpat1-dev | libexpat-dev Standards-Version: 3.9.0 Section: libs Homepage: http://www.nitrc.org/projects/gifti XS-DM-Upload-Allowed: yes Vcs-Browser: http://git.debian.org/?p=pkg-exppsy/gifticlib.git Vcs-Git: git://git.debian.org/git/pkg-exppsy/gifticlib.git Package: libgiftiio0 Section: libs Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends} Description: IO library for the GIFTI cortical surface data format GIFTI is an XML-based file format for cortical surface data. This reference IO implementation is developed by the Neuroimaging Informatics Technology Initiative (NIfTI). . This package contains the shared library. Package: libgiftiio-dev Section: libdevel Architecture: any Depends: libgiftiio0 (= ${binary:Version}), ${shlibs:Depends}, ${misc:Depends} Description: IO library for the GIFTI cortical surface data format GIFTI is an XML-based file format for cortical surface data. This reference IO implementation is developed by the Neuroimaging Informatics Technology Initiative (NIfTI). . This package provides the header files and static library. Package: gifti-bin Section: utils Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends} Description: tools shipped with the GIFTI library GIFTI is an XML-based file format for cortical surface data. This reference IO implementation is developed by the Neuroimaging Informatics Technology Initiative (NIfTI). . This package provides the tools that are shipped with the library (gifti_tool and gifti_test). debian/patches/0000755000000000000000000000000011421573310010612 5ustar debian/patches/no_itk0000644000000000000000000000175611421572554012042 0ustar --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -9,14 +9,14 @@ SET(GIFTI_INSTALL_LIB_DIR "${CMAKE_INSTALL_PREFIX}/lib") SET(GIFTI_INSTALL_INCLUDE_DIR "${CMAKE_INSTALL_PREFIX}/include/gifti") -FIND_PACKAGE(ITK) -IF(ITK_FOUND) +#FIND_PACKAGE(ITK) +#IF(ITK_FOUND) # ITK provides expat and zlib. - INCLUDE(${ITK_USE_FILE}) - SET(EXPAT_LIBRARIES ITKEXPAT) - SET(ZLIB_LIBRARIES ITKznz) - SET(NIFTI_LIBRARIES ITKniftiio) -ELSE(ITK_FOUND) +# INCLUDE(${ITK_USE_FILE}) +# SET(EXPAT_LIBRARIES ITKEXPAT) +# SET(ZLIB_LIBRARIES ITKznz) +# SET(NIFTI_LIBRARIES ITKniftiio) +#ELSE(ITK_FOUND) # Otherwise, get it from elsewhere. FIND_PACKAGE(EXPAT) FIND_PACKAGE(ZLIB) @@ -27,7 +27,7 @@ GET_FILENAME_COMPONENT(GIFTI_LINK_DIRECTORIES ${NIFTI_LIBRARY} PATH) LINK_DIRECTORIES(${GIFTI_LINK_DIRECTORIES}) INCLUDE_DIRECTORIES(${NIFTI_INCLUDE_DIR}) -ENDIF(ITK_FOUND) +#ENDIF(ITK_FOUND) # shared library API versioning -- NOT the same as the release version SET(GIFTI_SHAREDLIB_VERSION "0.0.0") debian/patches/series0000644000000000000000000000000711421573310012024 0ustar no_itk debian/gifti-bin.install0000644000000000000000000000001211421572554012425 0ustar usr/bin/* debian/changelog0000644000000000000000000000106211421573310011034 0ustar gifticlib (1.0.9-1) unstable; urgency=low * New upstream release. Merged cmake patch. * Adjust build-dependency on libnifti-dev (no versioned -dev package anymore). * Bump Standards-version to 3.9.0, no changes necessary. -- Michael Hanke Wed, 21 Jul 2010 09:30:12 -0400 gifticlib (1.0.8-1) unstable; urgency=low * Initial Debian packaging based on debhelper's "dh" and using the new source package format 3.0 (quilt). Closes: #587047. -- Michael Hanke Sun, 25 Apr 2010 12:47:51 -0400 debian/gifti-bin.manpages0000644000000000000000000000002411421572554012555 0ustar debian/gifti_test.1 debian/libgiftiio0.install0000644000000000000000000000001711421572554012763 0ustar usr/lib/*.so.* debian/gifti_test.10000644000000000000000000000275611421572554011431 0ustar .TH GIFTI_TEST "1" "June 2010" "gifti_test" "User Commands" .SH NAME gifti_test \- test reading/writing a GIFTI dataset .SH SYNOPSIS .B gifti_test [\fI...\fR] .SH OPTIONS .TP \fB\-help\fR Show usage help. .TP \fB\-gifti_hist\fR Show giftilib history. .TP \fB\-gifti_ver\fR Show giftilib version. .TP \fB\-encoding\fR TYPE Set the data encoding for any output file. .IP TYPE = ASCII : ASCII encoding .IP TYPE = BASE64 : base64 binary .IP TYPE = BASE64GZIP : base64 compressed binary .TP \fB\-gfile\fR OUTPUT Write out dataset as gifti image. .TP \fB\-infile\fR INPUT Specify INPUT as the GIFTI dataset to read. .TP \fB\-no_data\fR Do not write out data. .TP \fB\-show\fR Show final gifti image. .TP \fB\-slist\fR LEN s0... Restrict output to list of length LEN. .TP \fB\-verb\fR VERB Set verbose level. .SH EXAMPLES .TP 1. read in a GIFTI dataset (verbose, show output?) .IP gifti_test -infile dset.gii .IP gifti_test -infile dset.gii -verb 3 .IP gifti_test -infile dset.gii -show .TP 2. copy a GIFTI dataset (check differences?) .IP gifti_test -infile dset.gii -gfile copy.gii .IP diff dset.gii copy.gii .TP 3. copy a GIFTI data, but write out only 3 surf indices: 0,4,5 .IP gifti_test -infile time_series.gii -gfile ts3.gii -slist 3 0 4 5 .SH SEE ALSO Website: .I http://www.nitrc.org/projects/gifti .SH AUTHOR Richard Reynolds \- SSCC, DIRP, NIMH, National Institutes of Health .PP This manual page was written by Michael Hanke , for the Debian project (but may be used by others). debian/watch0000644000000000000000000000011411421572554010221 0ustar version=3 http://www.nitrc.org/frs/?group_id=75 .*/gifticlib-([\d\.]+)\.tgz debian/rules0000755000000000000000000000021211421572554010247 0ustar #!/usr/bin/make -f # -*- makefile -*- export LDFLAGS = -Wl,--no-undefined # one ring to rule them all ... %: dh $@ --buildsystem=cmake