debian/0002755000000000000000000000000012140552510007163 5ustar debian/rules0000755000000000000000000000105112126762062010247 0ustar #!/usr/bin/make -f # -*- makefile -*- # debian/rules file for the Debian/GNU Linux r-cran-mcmcpack package DPKG_EXPORT_BUILDFLAGS = 1 include /usr/share/dpkg/buildflags.mk PKG_CFLAGS=$(CFLAGS) PKG_CXXFLAGS=$(CXXFLAGS) PKG_CPPFLAGS=$(CPPFLAGS) PKG_FFLAGS=$(FFLAGS) export PKG_CFLAGS PKG_CXXFLAGS PKG_CPPFLAGS PKG_FFLAGS makeFlags="LDFLAGS=$(LDFLAGS)" include /usr/share/R/debian/r-cran.mk ## Remove extra license file common-install-arch:: rm -vf debian/r-cran-mcmcpack/usr/lib/R/site-library/MCMCpack/LICENSE clean:: rm -vf src/Makevars debian/source/0002755000000000000000000000000011354520521010466 5ustar debian/source/format0000644000000000000000000000001411354520521011672 0ustar 3.0 (quilt) debian/compat0000644000000000000000000000000212126761216010370 0ustar 9 debian/copyright0000644000000000000000000000217711354520505011130 0ustar This package was debianized by Chris Lawrence on Sun, 30 Mar 2003 08:10:27 -0600. It was downloaded from http://mcmcpack.wustl.edu/ Upstream Authors: Andrew D. Martin , Kevin M. Quinn , and Daniel Pemstein. Copyright: © 2003 Andrew D. Martin, Kevin M. Quinn, and Daniel Pemstein. This package is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; version 2 dated June, 1991. This package is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA On Debian systems, the complete text of the GNU General Public License can be found in `/usr/share/common-licenses/GPL-2'. debian/docs0000644000000000000000000000002311354520505010034 0ustar README DESCRIPTION debian/watch0000644000000000000000000000010711612665021010215 0ustar version=2 http://cran.r-project.org/src/contrib/MCMCpack_(.*)\.tar\.gz debian/changelog0000644000000000000000000002260712140552430011043 0ustar mcmcpack (1.3-3-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Thu, 02 May 2013 17:05:27 -0400 mcmcpack (1.3-2-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Sun, 21 Apr 2013 22:48:07 -0400 mcmcpack (1.2-4.1-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Sat, 06 Apr 2013 20:00:04 -0400 mcmcpack (1.2-4-1) unstable; urgency=low * New upstream release. * Rebuild for R 3.0. -- Chris Lawrence Wed, 03 Apr 2013 04:01:40 -0400 mcmcpack (1.2-3-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Sun, 13 May 2012 22:20:11 -0400 mcmcpack (1.2-2-1.1) unstable; urgency=low * Non-maintainer upload. * Fix "ftbfs with GCC-4.7": add patch gcc-4.7.patch ("this->" qualifier). (Closes: #667272) -- gregor herrmann Tue, 08 May 2012 17:06:03 +0200 mcmcpack (1.2-2-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Thu, 22 Mar 2012 13:52:23 -0400 mcmcpack (1.1-5-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Tue, 25 Oct 2011 22:38:29 -0400 mcmcpack (1.1-4-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Sun, 09 Oct 2011 05:29:12 -0400 mcmcpack (1.1-1-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Sat, 23 Jul 2011 19:31:07 -0500 mcmcpack (1.0-11-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Fri, 06 May 2011 13:16:06 -0500 mcmcpack (1.0-10-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Sun, 06 Mar 2011 17:16:24 -0600 mcmcpack (1.0-9-2) unstable; urgency=low * Use simplified debian/rules. -- Chris Lawrence Sat, 05 Feb 2011 02:31:18 -0600 mcmcpack (1.0-9-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Sat, 05 Feb 2011 02:18:45 -0600 mcmcpack (1.0-8-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Sat, 15 Jan 2011 11:24:48 -0600 mcmcpack (1.0-7-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Wed, 07 Jul 2010 03:47:13 -0500 mcmcpack (1.0-6-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Thu, 13 May 2010 02:03:43 -0500 mcmcpack (1.0-5-2) unstable; urgency=low * Update dependencies for VR bundle split. -- Chris Lawrence Mon, 12 Apr 2010 23:44:47 -0500 mcmcpack (1.0-5-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Tue, 30 Mar 2010 20:11:33 -0500 mcmcpack (1.0-4-2) unstable; urgency=low * Rebuild for R >= 2.10.0. -- Chris Lawrence Mon, 26 Oct 2009 00:20:55 -0500 mcmcpack (1.0-4-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Thu, 10 Sep 2009 00:34:49 -0500 mcmcpack (1.0-3-1) unstable; urgency=low * New upstream release -- Chris Lawrence Thu, 30 Jul 2009 15:01:11 -0500 mcmcpack (1.0-2-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Sat, 25 Jul 2009 01:25:18 -0500 mcmcpack (1.0-1-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Wed, 01 Jul 2009 18:31:04 -0500 mcmcpack (0.9-6-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Mon, 16 Mar 2009 22:18:40 -0500 mcmcpack (0.9-4-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Tue, 04 Mar 2008 14:52:43 -0600 mcmcpack (0.9-3-1) unstable; urgency=low * New upstream release. * Fix FTBFS on amd64. (Closes: #417427) -- Chris Lawrence Sat, 01 Mar 2008 22:51:00 -0600 mcmcpack (0.9-2-1) unstable; urgency=low * New upstream release -- Chris Lawrence Sun, 07 Oct 2007 20:16:55 -0500 mcmcpack (0.9-1-1) unstable; urgency=low * New upstream release -- Chris Lawrence Mon, 03 Sep 2007 15:39:59 -0500 mcmcpack (0.8-2-1) unstable; urgency=low * New upstream release -- Chris Lawrence Tue, 10 Jul 2007 17:27:59 -0500 mcmcpack (0.8-1-1) unstable; urgency=low * New upstream release -- Chris Lawrence Sat, 20 Jan 2007 21:45:31 -0600 mcmcpack (0.7-4-2) unstable; urgency=low * Look for trunc() in -lm, to fix FTBFS on m68k (and possibly other platforms?). (Closes: #389400) -- Chris Lawrence Sun, 8 Oct 2006 18:21:07 -0500 mcmcpack (0.7-4-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Thu, 5 Oct 2006 02:12:06 -0500 mcmcpack (0.7-3-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Thu, 21 Sep 2006 21:30:32 -0500 mcmcpack (0.7-2-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Thu, 1 Jun 2006 16:10:06 -0400 mcmcpack (0.7-1-1) unstable; urgency=low * New upstream release. * Revise description to omit discussion of "upcoming" models that don't seem to be upcoming; add suggestions of bayesm, eco, and mnp to fill in some of the gaps. -- Chris Lawrence Sun, 29 Jan 2006 22:01:22 -0500 mcmcpack (0.6-6-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Thu, 8 Dec 2005 08:59:17 -0500 mcmcpack (0.6-5-2) unstable; urgency=low * Fix FTBFS with gcc 4.0.2-3 and later. (Closes: #336281) -- Chris Lawrence Sat, 29 Oct 2005 23:40:09 -0400 mcmcpack (0.6-5-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Thu, 30 Jun 2005 16:03:34 -0500 mcmcpack (0.6-4-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Sat, 2 Apr 2005 23:07:43 -0600 mcmcpack (0.6-1-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Thu, 3 Mar 2005 19:01:23 -0600 mcmcpack (0.5-2-4) unstable; urgency=low * Really fix FTBFS on autobuilders. -- Chris Lawrence Mon, 11 Oct 2004 10:56:34 -0500 mcmcpack (0.5-2-3) unstable; urgency=low * Fix FTBFS on autobuilders. -- Chris Lawrence Sat, 9 Oct 2004 21:25:59 -0500 mcmcpack (0.5-2-2) unstable; urgency=low * Rebuild for R 2.0.0. -- Chris Lawrence Fri, 8 Oct 2004 00:24:03 -0500 mcmcpack (0.5-2-1) unstable; urgency=low * New upstream release. Kudos to Andrew, Kevin, and Pierre L'Ecuyer for their quick response to license issues with 0.5-1. * Now require r-cran-coda (>> 0.8). * Include HISTORY file as upstream changelog. -- Chris Lawrence Tue, 17 Aug 2004 21:38:55 -0500 mcmcpack (0.4-8-2) unstable; urgency=low * Update dependencies for r-recommended package split. -- Chris Lawrence Mon, 3 May 2004 14:15:55 -0500 mcmcpack (0.4-8-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Tue, 17 Feb 2004 23:35:33 -0600 mcmcpack (0.4-7-1) unstable; urgency=low * New upstream release. * Update control file description for new upstream URL. -- Chris Lawrence Thu, 5 Feb 2004 16:50:13 -0600 mcmcpack (0.4-6-1) unstable; urgency=low * New upstream release + Fixed a bug in rnoncenhypergeom() -- Chris Lawrence Fri, 5 Dec 2003 10:33:51 -0600 mcmcpack (0.4-5-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Mon, 17 Nov 2003 13:17:39 -0600 mcmcpack (0.4-3-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Mon, 13 Oct 2003 08:19:13 -0500 mcmcpack (0.4-2-1) unstable; urgency=low * New upstream release. * Revised packaging to be more compatible with new upstream versions. -- Chris Lawrence Sat, 9 Aug 2003 22:44:39 -0500 mcmcpack (0.4-1-1) unstable; urgency=low * The "my days of being ABD are close to being over" release. * New upstream release. * New features: + Metric and ordinal factor analysis models. + k-dimensional item response theory model. + A few new density and random draw functions. * Install package to /usr/lib/R/site-library. * Updated to standards-version 3.5.10; no substantive changes. * Add Daniel Pemstein to upstream authors. -- Chris Lawrence Tue, 10 Jun 2003 14:11:07 -0500 mcmcpack (0.3-11-3) unstable; urgency=low * Remove build hack now that R 1.7.0 has been released incorporating the needed fix. * Depend on r-recommended and r-base-core; remove r-base dependency. -- Chris Lawrence Mon, 21 Apr 2003 11:33:45 -0500 mcmcpack (0.3-11-2) unstable; urgency=medium * Depend on r-cran-coda. (Closes: #187071) * Note in the description that other samplers are used, in addition to Gibbs sampling. -- Chris Lawrence Sat, 5 Apr 2003 22:29:25 -0600 mcmcpack (0.3-11-1) unstable; urgency=low * Initial Release. (Closes: #169717) -- Chris Lawrence Sun, 30 Mar 2003 08:10:27 -0600 debian/control0000644000000000000000000000355212126762004010576 0ustar Source: mcmcpack Section: gnu-r Priority: optional Maintainer: Chris Lawrence Build-Depends: debhelper (>> 9), r-base-dev (>= 3.0), r-cran-coda (>= 0.16), r-cran-mass, cdbs, dpkg-dev (>= 1.16.1~) Standards-Version: 3.9.3 Homepage: http://mcmcpack.wustl.edu/ Package: r-cran-mcmcpack Architecture: any Depends: ${shlibs:Depends}, r-cran-coda (>= 0.16), r-cran-mass, ${misc:Depends}, ${R:Depends} Suggests: r-cran-bayesm, r-cran-eco, r-cran-mnp Description: R routines for Markov chain Monte Carlo model estimation This is a set of routines for GNU R that implement various statistical and econometric models using Markov chain Monte Carlo (MCMC) estimation, which allows "solving" models that would otherwise be intractable with traditional techniques, particularly problems in Bayesian statistics (where one or more "priors" are used as part of the estimation procedure, instead of an assumption of ignorance about the "true" point estimates), although MCMC can also be used to solve frequentist statistical problems with uninformative priors. MCMC techniques are also preferable over direct estimation in the presence of missing data. . Currently implemented are a number of ecological inference (EI) routines (for estimating individual-level attributes or behavior from aggregate data, such as electoral returns or census results), as well as models for traditional linear panel and cross-sectional data, some visualization routines for EI diagnostics, two item-response theory (or ideal-point estimation) models, metric, ordinal, and mixed-response factor analysis, and models for Gaussian (linear) and Poisson regression, logistic regression (or logit), and binary and ordinal-response probit models. . The suggested packages (r-cran-bayesm, -eco, and -mnp) contain additional models that may also be useful for those interested in this package.