debian/0000755000000000000000000000000012174426316007174 5ustar debian/source/0000755000000000000000000000000012174426316010474 5ustar debian/source/format0000755000000000000000000000001412174425124011701 0ustar 3.0 (quilt) debian/control0000644000000000000000000000220612174425774010606 0ustar Source: metastudent-data-2 Section: science Priority: optional Maintainer: Debian Med Packaging Team Uploaders: Tobias Hamp , Laszlo Kajan Build-Depends-Indep: debhelper (>=8~), rsync Standards-Version: 3.9.4 Homepage: https://rostlab.org/owiki/index.php/Metastudent Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/metastudent-data-2/trunk/ Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/metastudent-data-2/trunk/ Package: metastudent-data-2 Architecture: all Pre-Depends: dpkg (>= 1.15.6~) Depends: ${misc:Depends} Description: predictor of Gene Ontology terms from protein sequence - data #2 Often, only the sequence of a protein is known, but not its functions. Metastudent will try to predict missing functional annotations through homology searches (BLAST). . All predicted functions correspond to Gene Ontology (GO) terms from the Molecular Function Ontology (MFO) and the Biological Process Ontology (BPO) and are associated with a reliability score. . This package contains additional data files for metastudent. debian/README.source0000644000000000000000000000024612174425727011362 0ustar metastudent-data-2 for Debian ============================= This package provides additional architecture independent data files required by metastudent (>= 1.0.10). debian/copyright0000644000000000000000000000205412174425124011124 0ustar Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: metastudent-data-2 Upstream-Contact: Tobias Hamp Source: ftp://rostlab.org/metastudent/ Files: * Copyright: 2013, Tobias Hamp License: GPL-2+ License: GPL-2+ This package is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. . This package is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this package; if not, see . . On Debian systems, the complete text of the GNU General Public License version 2 can be found in `/usr/share/common-licenses/GPL-2' debian/changelog0000644000000000000000000000021712174426215011044 0ustar metastudent-data-2 (1.0.0-1) unstable; urgency=low * Initial release. -- Tobias Hamp Sat, 08 Jun 2013 17:43:57 +0200 debian/watch0000644000000000000000000000015312174425124010220 0ustar version=3 opts=pasv ftp://rostlab.org/metastudent/metastudent-data-2-([0-9.]+)\.tar\.[bgx]z debian uupdate debian/rules0000755000000000000000000000053012174425124010246 0ustar #!/usr/bin/make -f # Uncomment this to turn on verbose mode. #export DH_VERBOSE=1 %: dh $@ --parallel DEB_COMPRESS_TYPE ?= xz #DEB_COMPRESS_LEVEL ?= -z0v override_dh_builddeb: dh_builddeb -- -Z$(DEB_COMPRESS_TYPE) $(DEB_COMPRESS_LEVEL) .PHONY: get-orig-source: mkdir -p ../tarballs uscan --verbose --force-download --destdir=../tarballs debian/upstream0000644000000000000000000000146212174425124010756 0ustar Name: metastudent-data-2 Contact: Tobias Hamp Homepage: https://rostlab.org/owiki/index.php/Metastudent Reference: - Author: Tobias Hamp and Rebecca Kassner and Stefan Seemayer and Esmeralda Vicedo and Christian Schaefer and Dominik Achten and Florian Auer and Ariane Boehm and Tatjana Braun and Maximilian Hecht and Mark Heron and Peter Hönigschmid and Thomas A. Hopf and Stefanie Kaufmann and Michael Kiening and Denis Krompass and Cedric Landerer and Yannick Mahlich and Manfred Roos and Burkhard Rost Title: 'Homology-based inference sets the bar high for protein function prediction.' Journal: BMC Bioinformatics Year: 2013 Volume: 14 Number: 'Suppl 3' Pages: S7 DOI: 10.1186/1471-2105-14-S3-S7 PMID: 23514582 URL: http://www.biomedcentral.com/1471-2105/14/S3/S7/ debian/compat0000644000000000000000000000000212174425124010366 0ustar 8