debian/0000755000000000000000000000000012145626247007177 5ustar debian/source/0000755000000000000000000000000012145626247010477 5ustar debian/source/format0000755000000000000000000000001412142447264011705 0ustar 3.0 (quilt) debian/control0000644000000000000000000000222412145625144010575 0ustar Source: metastudent-data Section: science Priority: optional Maintainer: Debian Med Packaging Team Uploaders: Tobias Hamp , Laszlo Kajan Build-Depends-Indep: blast2, debhelper (>=8~), rsync Standards-Version: 3.9.4 Homepage: https://rostlab.org/owiki/index.php/Metastudent Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/metastudent-data/trunk/ Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/metastudent-data/trunk/ Package: metastudent-data Architecture: all Homepage: http://www.rostlab.org Pre-Depends: dpkg (>= 1.15.6~) Depends: ${misc:Depends} Description: predictor of Gene Ontology terms from protein sequence - data files Often, only the sequence of a protein is known, but not its functions. Metastudent will try to predict missing functional annotations through homology searches (BLAST). . All predicted functions correspond to Gene Ontology (GO) terms from the Molecular Function Ontology (MFO) and the Biological Process Ontology (BPO) and are associated with a reliability score. . This package contains data files for metastudent. debian/README.source0000644000000000000000000000042412142447265011354 0ustar metastudent-data for Debian =========================== This package provides large (>100MB uncompressed) BLAST databases required by metastudent. The databases are in binary format, and are multi-platform. For this reason they are installed into /usr/share/metastudent-data. debian/copyright0000644000000000000000000000205712142447265011134 0ustar Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: metastudent-data Upstream-Contact: Tobias Hamp Source: ftp://rostlab.org/metastudent/ Files: * Copyright: 2011-2013, Tobias Hamp License: GPL-2+ License: GPL-2+ This package is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. . This package is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this package; if not, see . . On Debian systems, the complete text of the GNU General Public License version 2 can be found in `/usr/share/common-licenses/GPL-2' debian/changelog0000644000000000000000000000052412145625376011054 0ustar metastudent-data (1.0.1-2) unstable; urgency=low * Added missing build dependency rsync (Closes: #708715) -- Laszlo Kajan Wed, 08 May 2013 17:42:14 +0200 metastudent-data (1.0.1-1) unstable; urgency=low * Initial release (Closes: #705537) -- Tobias Hamp Fri, 26 Apr 2013 07:43:57 +0200 debian/watch0000644000000000000000000000015112142447264010222 0ustar version=3 opts=pasv ftp://rostlab.org/metastudent/metastudent-data-([0-9.]+)\.tar\.[bgx]z debian uupdate debian/rules0000755000000000000000000000036012142453076010251 0ustar #!/usr/bin/make -f # Uncomment this to turn on verbose mode. #export DH_VERBOSE=1 %: dh $@ --parallel DEB_COMPRESS_TYPE ?= xz #DEB_COMPRESS_LEVEL ?= -z0v override_dh_builddeb: dh_builddeb -- -Z$(DEB_COMPRESS_TYPE) $(DEB_COMPRESS_LEVEL) debian/upstream0000644000000000000000000000146012142447264010760 0ustar Name: metastudent-data Contact: Tobias Hamp Homepage: https://rostlab.org/owiki/index.php/Metastudent Reference: - Author: Tobias Hamp and Rebecca Kassner and Stefan Seemayer and Esmeralda Vicedo and Christian Schaefer and Dominik Achten and Florian Auer and Ariane Boehm and Tatjana Braun and Maximilian Hecht and Mark Heron and Peter Hönigschmid and Thomas A. Hopf and Stefanie Kaufmann and Michael Kiening and Denis Krompass and Cedric Landerer and Yannick Mahlich and Manfred Roos and Burkhard Rost Title: 'Homology-based inference sets the bar high for protein function prediction.' Journal: BMC Bioinformatics Year: 2013 Volume: 14 Number: 'Suppl 3' Pages: S7 DOI: 10.1186/1471-2105-14-S3-S7 PMID: 23514582 URL: http://www.biomedcentral.com/1471-2105/14/S3/S7/ debian/compat0000644000000000000000000000000212142447264010372 0ustar 8