pax_global_header00006660000000000000000000000064131456547520014526gustar00rootroot0000000000000052 comment=e0d64fefaddcd5f244b0e599e06004e0e7abf97c mpgrafic-0.3.15/000077500000000000000000000000001314565475200134045ustar00rootroot00000000000000mpgrafic-0.3.15/AUTHORS000066400000000000000000000003241314565475200144530ustar00rootroot00000000000000Main authors (since 2008): Simon Prunet - prunet iap.fr Christophe Pichon - pichon iap.fr Other authors: - since 2016: Boud Roukema - boud cosmo.torun.pl Emails/affiliations are for identification only. mpgrafic-0.3.15/COPYING000066400000000000000000000432541314565475200144470ustar00rootroot00000000000000 GNU GENERAL PUBLIC LICENSE Version 2, June 1991 Copyright (C) 1989, 1991 Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA Everyone is permitted to copy and distribute verbatim copies of this license document, but changing it is not allowed. Preamble The licenses for most software are designed to take away your freedom to share and change it. By contrast, the GNU General Public License is intended to guarantee your freedom to share and change free software--to make sure the software is free for all its users. This General Public License applies to most of the Free Software Foundation's software and to any other program whose authors commit to using it. (Some other Free Software Foundation software is covered by the GNU Lesser General Public License instead.) You can apply it to your programs, too. When we speak of free software, we are referring to freedom, not price. Our General Public Licenses are designed to make sure that you have the freedom to distribute copies of free software (and charge for this service if you wish), that you receive source code or can get it if you want it, that you can change the software or use pieces of it in new free programs; and that you know you can do these things. To protect your rights, we need to make restrictions that forbid anyone to deny you these rights or to ask you to surrender the rights. These restrictions translate to certain responsibilities for you if you distribute copies of the software, or if you modify it. For example, if you distribute copies of such a program, whether gratis or for a fee, you must give the recipients all the rights that you have. You must make sure that they, too, receive or can get the source code. And you must show them these terms so they know their rights. We protect your rights with two steps: (1) copyright the software, and (2) offer you this license which gives you legal permission to copy, distribute and/or modify the software. Also, for each author's protection and ours, we want to make certain that everyone understands that there is no warranty for this free software. If the software is modified by someone else and passed on, we want its recipients to know that what they have is not the original, so that any problems introduced by others will not reflect on the original authors' reputations. Finally, any free program is threatened constantly by software patents. We wish to avoid the danger that redistributors of a free program will individually obtain patent licenses, in effect making the program proprietary. To prevent this, we have made it clear that any patent must be licensed for everyone's free use or not licensed at all. The precise terms and conditions for copying, distribution and modification follow. GNU GENERAL PUBLIC LICENSE TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION 0. This License applies to any program or other work which contains a notice placed by the copyright holder saying it may be distributed under the terms of this General Public License. The "Program", below, refers to any such program or work, and a "work based on the Program" means either the Program or any derivative work under copyright law: that is to say, a work containing the Program or a portion of it, either verbatim or with modifications and/or translated into another language. (Hereinafter, translation is included without limitation in the term "modification".) Each licensee is addressed as "you". Activities other than copying, distribution and modification are not covered by this License; they are outside its scope. The act of running the Program is not restricted, and the output from the Program is covered only if its contents constitute a work based on the Program (independent of having been made by running the Program). Whether that is true depends on what the Program does. 1. You may copy and distribute verbatim copies of the Program's source code as you receive it, in any medium, provided that you conspicuously and appropriately publish on each copy an appropriate copyright notice and disclaimer of warranty; keep intact all the notices that refer to this License and to the absence of any warranty; and give any other recipients of the Program a copy of this License along with the Program. You may charge a fee for the physical act of transferring a copy, and you may at your option offer warranty protection in exchange for a fee. 2. You may modify your copy or copies of the Program or any portion of it, thus forming a work based on the Program, and copy and distribute such modifications or work under the terms of Section 1 above, provided that you also meet all of these conditions: a) You must cause the modified files to carry prominent notices stating that you changed the files and the date of any change. b) You must cause any work that you distribute or publish, that in whole or in part contains or is derived from the Program or any part thereof, to be licensed as a whole at no charge to all third parties under the terms of this License. c) If the modified program normally reads commands interactively when run, you must cause it, when started running for such interactive use in the most ordinary way, to print or display an announcement including an appropriate copyright notice and a notice that there is no warranty (or else, saying that you provide a warranty) and that users may redistribute the program under these conditions, and telling the user how to view a copy of this License. (Exception: if the Program itself is interactive but does not normally print such an announcement, your work based on the Program is not required to print an announcement.) These requirements apply to the modified work as a whole. If identifiable sections of that work are not derived from the Program, and can be reasonably considered independent and separate works in themselves, then this License, and its terms, do not apply to those sections when you distribute them as separate works. But when you distribute the same sections as part of a whole which is a work based on the Program, the distribution of the whole must be on the terms of this License, whose permissions for other licensees extend to the entire whole, and thus to each and every part regardless of who wrote it. Thus, it is not the intent of this section to claim rights or contest your rights to work written entirely by you; rather, the intent is to exercise the right to control the distribution of derivative or collective works based on the Program. In addition, mere aggregation of another work not based on the Program with the Program (or with a work based on the Program) on a volume of a storage or distribution medium does not bring the other work under the scope of this License. 3. You may copy and distribute the Program (or a work based on it, under Section 2) in object code or executable form under the terms of Sections 1 and 2 above provided that you also do one of the following: a) Accompany it with the complete corresponding machine-readable source code, which must be distributed under the terms of Sections 1 and 2 above on a medium customarily used for software interchange; or, b) Accompany it with a written offer, valid for at least three years, to give any third party, for a charge no more than your cost of physically performing source distribution, a complete machine-readable copy of the corresponding source code, to be distributed under the terms of Sections 1 and 2 above on a medium customarily used for software interchange; or, c) Accompany it with the information you received as to the offer to distribute corresponding source code. (This alternative is allowed only for noncommercial distribution and only if you received the program in object code or executable form with such an offer, in accord with Subsection b above.) The source code for a work means the preferred form of the work for making modifications to it. For an executable work, complete source code means all the source code for all modules it contains, plus any associated interface definition files, plus the scripts used to control compilation and installation of the executable. However, as a special exception, the source code distributed need not include anything that is normally distributed (in either source or binary form) with the major components (compiler, kernel, and so on) of the operating system on which the executable runs, unless that component itself accompanies the executable. If distribution of executable or object code is made by offering access to copy from a designated place, then offering equivalent access to copy the source code from the same place counts as distribution of the source code, even though third parties are not compelled to copy the source along with the object code. 4. You may not copy, modify, sublicense, or distribute the Program except as expressly provided under this License. Any attempt otherwise to copy, modify, sublicense or distribute the Program is void, and will automatically terminate your rights under this License. However, parties who have received copies, or rights, from you under this License will not have their licenses terminated so long as such parties remain in full compliance. 5. You are not required to accept this License, since you have not signed it. However, nothing else grants you permission to modify or distribute the Program or its derivative works. These actions are prohibited by law if you do not accept this License. Therefore, by modifying or distributing the Program (or any work based on the Program), you indicate your acceptance of this License to do so, and all its terms and conditions for copying, distributing or modifying the Program or works based on it. 6. Each time you redistribute the Program (or any work based on the Program), the recipient automatically receives a license from the original licensor to copy, distribute or modify the Program subject to these terms and conditions. You may not impose any further restrictions on the recipients' exercise of the rights granted herein. You are not responsible for enforcing compliance by third parties to this License. 7. If, as a consequence of a court judgment or allegation of patent infringement or for any other reason (not limited to patent issues), conditions are imposed on you (whether by court order, agreement or otherwise) that contradict the conditions of this License, they do not excuse you from the conditions of this License. If you cannot distribute so as to satisfy simultaneously your obligations under this License and any other pertinent obligations, then as a consequence you may not distribute the Program at all. For example, if a patent license would not permit royalty-free redistribution of the Program by all those who receive copies directly or indirectly through you, then the only way you could satisfy both it and this License would be to refrain entirely from distribution of the Program. If any portion of this section is held invalid or unenforceable under any particular circumstance, the balance of the section is intended to apply and the section as a whole is intended to apply in other circumstances. It is not the purpose of this section to induce you to infringe any patents or other property right claims or to contest validity of any such claims; this section has the sole purpose of protecting the integrity of the free software distribution system, which is implemented by public license practices. Many people have made generous contributions to the wide range of software distributed through that system in reliance on consistent application of that system; it is up to the author/donor to decide if he or she is willing to distribute software through any other system and a licensee cannot impose that choice. This section is intended to make thoroughly clear what is believed to be a consequence of the rest of this License. 8. If the distribution and/or use of the Program is restricted in certain countries either by patents or by copyrighted interfaces, the original copyright holder who places the Program under this License may add an explicit geographical distribution limitation excluding those countries, so that distribution is permitted only in or among countries not thus excluded. In such case, this License incorporates the limitation as if written in the body of this License. 9. The Free Software Foundation may publish revised and/or new versions of the General Public License from time to time. Such new versions will be similar in spirit to the present version, but may differ in detail to address new problems or concerns. Each version is given a distinguishing version number. If the Program specifies a version number of this License which applies to it and "any later version", you have the option of following the terms and conditions either of that version or of any later version published by the Free Software Foundation. If the Program does not specify a version number of this License, you may choose any version ever published by the Free Software Foundation. 10. If you wish to incorporate parts of the Program into other free programs whose distribution conditions are different, write to the author to ask for permission. For software which is copyrighted by the Free Software Foundation, write to the Free Software Foundation; we sometimes make exceptions for this. Our decision will be guided by the two goals of preserving the free status of all derivatives of our free software and of promoting the sharing and reuse of software generally. NO WARRANTY 11. BECAUSE THE PROGRAM IS LICENSED FREE OF CHARGE, THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW. EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING, REPAIR OR CORRECTION. 12. IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MAY MODIFY AND/OR REDISTRIBUTE THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGES. END OF TERMS AND CONDITIONS How to Apply These Terms to Your New Programs If you develop a new program, and you want it to be of the greatest possible use to the public, the best way to achieve this is to make it free software which everyone can redistribute and change under these terms. To do so, attach the following notices to the program. It is safest to attach them to the start of each source file to most effectively convey the exclusion of warranty; and each file should have at least the "copyright" line and a pointer to where the full notice is found. Copyright (C) This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. Also add information on how to contact you by electronic and paper mail. If the program is interactive, make it output a short notice like this when it starts in an interactive mode: Gnomovision version 69, Copyright (C) year name of author Gnomovision comes with ABSOLUTELY NO WARRANTY; for details type `show w'. This is free software, and you are welcome to redistribute it under certain conditions; type `show c' for details. The hypothetical commands `show w' and `show c' should show the appropriate parts of the General Public License. Of course, the commands you use may be called something other than `show w' and `show c'; they could even be mouse-clicks or menu items--whatever suits your program. You should also get your employer (if you work as a programmer) or your school, if any, to sign a "copyright disclaimer" for the program, if necessary. Here is a sample; alter the names: Yoyodyne, Inc., hereby disclaims all copyright interest in the program `Gnomovision' (which makes passes at compilers) written by James Hacker. , 1 April 1989 Ty Coon, President of Vice This General Public License does not permit incorporating your program into proprietary programs. If your program is a subroutine library, you may consider it more useful to permit linking proprietary applications with the library. If this is what you want to do, use the GNU Lesser General Public License instead of this License. mpgrafic-0.3.15/ChangeLog000066400000000000000000000116011314565475200151550ustar00rootroot000000000000002017-08-18 boud * v0.3.15 - src/wrap_rfftw3d_mod.f90 - use mpi type only if use mpi_f08 is enabled * v0.3.14 - grafic_io.f90: length now declared as C type (c_size_t) since size_t can be 32-bit even on 64-bit machines; mpi_f08 preprocessor macro test added for "use mpi_f08" in .f90 files, with fallback to "include 'mpif.h'" * v0.3.13 - regression-test-0.3.7.9.sh: use MPI_ALLOW_RUN_AS_ROOT for the openmpi option --allow-run-as-root if this is needed for automated testing. 2017-08-14 boud * v0.3.12 - parallel_io.c: bug fix: do not write null to unallocated location (fortran vs C string conversion); update regression-test-0.3.7.9.sh so that the MCA plm_rsh_agent is /bin/false. Upgrading mpif.h to "use mpi_f08" in multlipe files, along with int64_t replacing C long and downgrading MaxRandNumStreams to int32_t. 2017-07-30 boud * v0.3.11 - LFS: AC_SYS_LARGEFILE added to configure.ac, but int64_t retained in parallel_io.c rather than replacing it by off_t, because ISO C binding (c_off_t) does not seem to be standard; minor tidying in response to some compiler warnings; --enable-devmode option during ./configure. 2017-01-28 boud * v0.3.10 - portability: bypass fortran->C communicator types Debian bug #851918 on the s390x architecture, by adding and using two wrapper files: src/rfftw3d_mpi_create_plan_c_wrap.c, src/wrap_rfftw3d_mod.f90 2017-01-22 boud * v0.3.8 - portability: reproducible lower precision printed floats; iso_C_binding; avoid implementation-dependent integer sizes; avoid implementation-dependent fortran kind values * v0.3.9 - portability: lower precision printed float mppower.f90; partial code tidying based on strict compiler warnings; iseed, seeds -> c_long -> up to 4e9 cores can run with different seeds 2017-01-20 boud * v0.3.7.7 - regression test 0.3.7.7 - reduce required precision; avoid implementation-dependent assumption on `kind' parameter value * v0.3.7.8 - as for 0.3.7.7 but includes regression-test-0.3.7.8.sh * v0.3.7.9 - regression test 0.3.7.9 - reduce required precision 2017-01-19 boud * v0.3.7.6 - regression test - remove deprecated openmpi/orte option 2017-01-16 boud * v0.3.7.2 - make check - avoid running as root if possible * v0.3.7.3 - MPI_ALLOW_RUN_AS_ROOT - allow running make check as root * v0.3.7.4 - --allow-run-as-root is specific to openmpi * v0.3.7.5 revert allow-run-as-root related changes - see thread: https://lists.debian.org/debian-mentors/2017/01/msg00322.html; remove top Makefile.am `foreign' and `1.4' options 2017-01-15 boud * v0.3.6.4 - Regression test edit descriptors for reproducible floats * v0.3.7 - rename 0.3.6.4 since it passes standard tests * v0.3.7.1 - configure.ac: prioritise mpifort over deprecated (jessie or earlier) mpif90 2017-01-14 boud * v0.3.6.2 - System and mpi-implementation dependence of code regression test * v0.3.6.3 - regression test: s/return/exit/g 2017-01-13 boud * v0.3.6 - Simpler src/Makefile.am, .in, rm superfluous ltmain.sh * v0.3.6.1 - Avoid regression test dependence on mktemp 2017-01-12 boud * v0.3.5 - Regression test - fast full run should match output for version 0.3.4 2017-01-05 boud * v0.3.4 - replace pause statements - obsolete since f90; whitespace changes * v0.3.3 - minor changes motivated by debianisation 2016-12-27 boud * v0.3.2.1 - first debianisable version (tag v0.3.2 wrongly pushed) * particle resolution: allow user to avoid recompiling for simple usage * +minimal man page mpgrafic.1 * minimal GNU-style long and short options; hardwired in mpgrafic.f90 * autotools updates following: autoreconf -i -f * add examples: Input.stdin, Output.stdout; for portability: compile * tidying for debian version; rm kdevelop files obsolete, not essential * +config.h.in - configure will not work without this 2016-12-25 boud * v0.3.1 - first version on bitbucket 2016-12-24 boud + simon + christophe * configure.ac: handle both fftw and [sd]fftw library names of fftw2 * parts of v0.3: +templates/gdl * parts of v0.3: +gdl/idl routines, including licence GPLv2 * AUTHORS, README, insert GPLv2 licence in src/* * c_gsl_wrap.c - without including gsl_randist.h, results are nonsense * use GSL gaussian ziggurat directly - simpler random solution * mpgrafic.f90: clarify that ramses comment is for very old ramses only * parts of v0.3: Simon changes + s/non-free-rng/gsl_rng/g * parts of v0.3: overflow correction nx*ny*nz; random num generator; not yet compilable 2016-11-12 boud * v0.2.1.1 +grafic1.inc in EXTRA_DIST * v0.2.1 - minor changes - may not work for everyone * mv configure.in configure.ac * 1D number of particles: FCFLAGS=-DMPGRAFIC=32 ./configure * configure.ac for debian/jessie; autoconf && ./configure && make 2008-05-01 simon prunet + christophe pichon * v0.2 * md2sum333e8eff20312a8a8227b0692dd547bc mpgrafic-0.2.tar.gz * URL: ftp://ftp.iap.fr/pub/from_users/prunet/mpgrafic-0.2.tar.gz mpgrafic-0.3.15/INSTALL000066400000000000000000000366101314565475200144430ustar00rootroot00000000000000Installation Instructions ************************* Copyright (C) 1994-1996, 1999-2002, 2004-2013 Free Software Foundation, Inc. Copying and distribution of this file, with or without modification, are permitted in any medium without royalty provided the copyright notice and this notice are preserved. This file is offered as-is, without warranty of any kind. Basic Installation ================== Briefly, the shell command `./configure && make && make install' should configure, build, and install this package. The following more-detailed instructions are generic; see the `README' file for instructions specific to this package. Some packages provide this `INSTALL' file but do not implement all of the features documented below. The lack of an optional feature in a given package is not necessarily a bug. More recommendations for GNU packages can be found in *note Makefile Conventions: (standards)Makefile Conventions. The `configure' shell script attempts to guess correct values for various system-dependent variables used during compilation. 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On MacOS X 10.5 and later systems, you can create libraries and executables that work on multiple system types--known as "fat" or "universal" binaries--by specifying multiple `-arch' options to the compiler but only a single `-arch' option to the preprocessor. Like this: ./configure CC="gcc -arch i386 -arch x86_64 -arch ppc -arch ppc64" \ CXX="g++ -arch i386 -arch x86_64 -arch ppc -arch ppc64" \ CPP="gcc -E" CXXCPP="g++ -E" This is not guaranteed to produce working output in all cases, you may have to build one architecture at a time and combine the results using the `lipo' tool if you have problems. Installation Names ================== By default, `make install' installs the package's commands under `/usr/local/bin', include files under `/usr/local/include', etc. You can specify an installation prefix other than `/usr/local' by giving `configure' the option `--prefix=PREFIX', where PREFIX must be an absolute file name. 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Particular systems ================== On HP-UX, the default C compiler is not ANSI C compatible. If GNU CC is not installed, it is recommended to use the following options in order to use an ANSI C compiler: ./configure CC="cc -Ae -D_XOPEN_SOURCE=500" and if that doesn't work, install pre-built binaries of GCC for HP-UX. HP-UX `make' updates targets which have the same time stamps as their prerequisites, which makes it generally unusable when shipped generated files such as `configure' are involved. Use GNU `make' instead. On OSF/1 a.k.a. Tru64, some versions of the default C compiler cannot parse its `' header file. The option `-nodtk' can be used as a workaround. If GNU CC is not installed, it is therefore recommended to try ./configure CC="cc" and if that doesn't work, try ./configure CC="cc -nodtk" On Solaris, don't put `/usr/ucb' early in your `PATH'. This directory contains several dysfunctional programs; working variants of these programs are available in `/usr/bin'. So, if you need `/usr/ucb' in your `PATH', put it _after_ `/usr/bin'. On Haiku, software installed for all users goes in `/boot/common', not `/usr/local'. It is recommended to use the following options: ./configure --prefix=/boot/common Specifying the System Type ========================== There may be some features `configure' cannot figure out automatically, but needs to determine by the type of machine the package will run on. Usually, assuming the package is built to be run on the _same_ architectures, `configure' can figure that out, but if it prints a message saying it cannot guess the machine type, give it the `--build=TYPE' option. TYPE can either be a short name for the system type, such as `sun4', or a canonical name which has the form: CPU-COMPANY-SYSTEM where SYSTEM can have one of these forms: OS KERNEL-OS See the file `config.sub' for the possible values of each field. 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Integer bit-length consistency: grafic_io.f90: length now declared as C type (c_size_t) since size_t can be 32-bit even on 64-bit machines. The openmpi option --allow-run-as-root for automated testing using regression-test-0.3.7.9.sh is now set directly as an option rather than as an environment variable, since it appears to be ignored by mpirun in the latter case. * Main changes in release 0.3.12 (2017-08-14) [alpha] Bug fix in parallel_io.c: do not write null to unallocated location (fortran vs C string conversion; bug present since v0.2). The test script regression-test-0.3.7.9.sh has been updated to set the MCA plm_rsh_agent to /bin/false, since testing mpi over ssh has never been desired. The header mpif.h has been upgraded to "use mpi_f08" as per MPI recommendations (see 17.1.1 of the MPI 3.0 standard - http://mpi-forum.org/docs/mpi-3.0/mpi30-report.pdf) in multiple files, with downgrading of MaxRandNumStreams to int32_t, and hardcoding to (c_|)int64_t. * Main changes in release 0.3.11 (2017-07-30) [alpha] LFS: AC_SYS_LARGEFILE added to configure.ac, but int64_t retained in parallel_io.c rather than replacing it by off_t, because ISO C binding (c_off_t) does not seem to be standard; minor tidying in response to some compiler warnings; added --enable-devmode option for ./configure for developers. * Main changes in release 0.3.10 (2017-01-28) [alpha] Debian bug #851918 for (at least) the s390x architecture https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=851918 appears to be a problem between fftw2 and openmpi, related to the preprocessor macros MPI_COMM_F2C and FFTW_MPI_COMM_F2C, which are intended to provide implementation-independent conversion from fortran to C for MPI and fftw/MPI purposes. On s390x (at least), this has the bug indicated above - mpgrafic fails with MPI_Comm_dup reporting a fatal error. Since mpgrafic does not require a general fftw2/openmpi bux fix - it is a small program with only a few calls to fftw2 - a wrapper to `rfftw3d_mpi_create_plan', the only function subject to this bug and needed by mpgrafic, appears to solve this bug from mpgrafic's point of view. The two wrapper files are src/rfftw3d_mpi_create_plan_c_wrap.c and src/wrap_rfftw3d_mod.f90. ISO_C_binding is used to reduce the chance of future portability errors. * Main changes in release 0.3.9 (2017-01-22) [alpha] Previous versions stored the input `iseed' and the array `seeds' (generated by GSL using MT19937) as fortran `integer', which typically can be 16-bit, and on some machines might be 8-bit. That allowed at most 65536 distinct `seeds', so on a 10,000-core system, repeat elements of `seeds' would be extremely likely. In 0.3.9, the C long type is used, giving about 4e9 possible seeds. MaxRandNumStreams .eq. MaxParallelism in random.f90 limits the stored number of seeds. One minor reduction in printed float precision should enable the regression test (updated) to succeed on an i386 machine. * Main changes in release 0.3.8 (2017-01-22) [alpha] Portability: reproducible lower precision printed floats; iso_C_binding; avoid implementation-dependent integer sizes; avoid implementation-dependent fortran `kind' values. The portability improvements in 0.3.8 are only intended to cover some of the most likely sources of portability errors, and are unlikley to be complete. * Main changes in release 0.3.7 (2017-01-12) [alpha] A code regression test was added. Running this on future versions with `make check' should detect whether code changes have caused scientifically significant changes in the calculations. * Main changes in release 0.3.4 (2017-01-05) [alpha] Debianisation - a debian directory for preparing debian packets is available in the debian downstream version 0.3.4-1 at https://anonscm.debian.org/cgit/debian-astro/packages/mpgrafic.git/ mpgrafic-0.3.15/Output.stdout000066400000000000000000000153101314565475200161500ustar00rootroot00000000000000 Will generate initial conditions on grid of size 256 256 256 Select type of initial power spectrum (matter transfer function): 1 for T(k) from linger.dat 2 for T(k) from approx. analytical fit (BBKS) 3 for T(k)=1 (scale-free) 4 for T(k) from approx. analytical fit (E&Hu) Enter case (1,2,3 or 4) now: 4 Enter Omega_m, Omega_v, H0 (km/s/Mpc, set H0=1 for scale-free case) 0.300000012 0.699999988 70.0000000 Enter Omega_b 5.00000007E-02 Initializing power spectrum for Omega_m, Omega_v, H0= 0.300000012 0.699999988 70.0000000 Enter long-wave spectral index n (scale-invariant is n=1) 1.00000000 Enter desired normalization at a=1: Qrms-ps/micro-K (if > 0) or -sigma_8 (if < 0) = ? Computing Delta_2(k) using Sachs-Wolfe approxmation This may take several minutes. Qrms-ps/micro-K= 20.5477428 I can write the power spectrum of delta_rho/rho to disk (power.dat). If you would like this, please enter kmin and kmax (1/Mpc) Enter 0,0 if you don't want the power spectrum written to a file 9.99999978E-03 100.000000 Enter dx (initial particle spacing in Mpc, not Mpc/h) or enter -boxlength in Mpc/h i.e. dx in Mpc if > 0, or -boxlength in Mpc/h if < 0 -50.0000000 dx= 0.279017866 Mpc Enter 1 if these initial conditions will not be refined, otherwise enter the ultimate refinement factor for the smallest grid spacing (This is used only to set astart.) 1 Scaling initial conditions to starting a= 3.00068725E-02 when sigma(delta) at ultimate refinement scale= 0.200000003 vfact= 221.333496 Enter 0 for final output or 1 for further refinement 0 Setting output grid to 256 256 256 Enter to skip output grid size Enter to skip output grid offset Enter to skip final grid size Enter to skip final grid offset Will produce output files ic_deltab, ic_velb[xyz], ic_velc[xyz] Subgrid white noise: Choose irand (1 or 2) from the following list: irand=1 to generate new noise and save to file irand=2 to read noise from existing file Enter irand 1 Enter random number seed (9-digit integer, ignored if irand=2) 1234 Enter filename of white noise file (or if irand=0) white-outfile.dat Enter 1 if padding of large scales is required, 0 otherwise 0 Enter padding file name (white noise format, ignored if ipad=0) noisefile_dummy.dat Warning: Generating new random numbers in mpic4! myid,seeds: 0 822569775 Normalizing rms, subtracting average Mean value of the white noise box = -2.3314084748130102E-004 Will be removed Standard deviation of the white noise box = 0.99985838683469952 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 16777216.0 16777215 2.44140610E-04 Statistics of ic4 for idim, itide= 0 0 Mean sigma, sampled sigma, maximum= 0.243928477 0.243429005 1.40875602 Reading random numbers used in ic4 from white-outfile.dat Random numbers generated with iseed= 1234 Normalizing rms, subtracting average Mean value of the white noise box = -2.3314085176806781E-004 Will be removed Standard deviation of the white noise box = 0.99985838683251660 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 16777216.0 16777215 2.44141935E-04 Statistics of ic4 for idim, itide= 1 0 Mean sigma, sampled sigma, maximum= 0.219509587 0.218785495 0.914245963 Reading random numbers used in ic4 from white-outfile.dat Random numbers generated with iseed= 1234 Normalizing rms, subtracting average Mean value of the white noise box = -2.3314085176806781E-004 Will be removed Standard deviation of the white noise box = 0.99985838683251660 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 16777216.0 16777215 2.44141935E-04 Statistics of ic4 for idim, itide= 2 0 Mean sigma, sampled sigma, maximum= 0.219509587 0.204993233 0.792325854 Reading random numbers used in ic4 from white-outfile.dat Random numbers generated with iseed= 1234 Normalizing rms, subtracting average Mean value of the white noise box = -2.3314085176806781E-004 Will be removed Standard deviation of the white noise box = 0.99985838683251660 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 16777216.0 16777215 2.44141935E-04 Statistics of ic4 for idim, itide= 3 0 Mean sigma, sampled sigma, maximum= 0.219509587 0.175664037 0.743286073 Reading random numbers used in ic4 from white-outfile.dat Random numbers generated with iseed= 1234 Normalizing rms, subtracting average Mean value of the white noise box = -2.3314085176806781E-004 Will be removed Standard deviation of the white noise box = 0.99985838683251660 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 16777216.0 16777215 2.44141935E-04 Statistics of ic4 for idim, itide= 1 0 Mean sigma, sampled sigma, maximum= 0.219509587 0.218785346 0.922476888 Reading random numbers used in ic4 from white-outfile.dat Random numbers generated with iseed= 1234 Normalizing rms, subtracting average Mean value of the white noise box = -2.3314085176806781E-004 Will be removed Standard deviation of the white noise box = 0.99985838683251660 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 16777216.0 16777215 2.44141935E-04 Statistics of ic4 for idim, itide= 2 0 Mean sigma, sampled sigma, maximum= 0.219509587 0.204993084 0.794799328 Reading random numbers used in ic4 from white-outfile.dat Random numbers generated with iseed= 1234 Normalizing rms, subtracting average Mean value of the white noise box = -2.3314085176806781E-004 Will be removed Standard deviation of the white noise box = 0.99985838683251660 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 16777216.0 16777215 2.44141935E-04 Statistics of ic4 for idim, itide= 3 0 Mean sigma, sampled sigma, maximum= 0.219509587 0.175663874 0.748545229 mpgrafic-0.3.15/Output.stdout.np32000066400000000000000000000145731314565475200167430ustar00rootroot00000000000000 Will generate initial conditions on grid of size 32 32 32 Select type of initial power spectrum (matter transfer function): 1 for T(k) from linger.dat 2 for T(k) from approx. analytical fit (BBKS) 3 for T(k)=1 (scale-free) 4 for T(k) from approx. analytical fit (E&Hu) Enter case (1,2,3 or 4) now: 4 Enter Omega_m, Omega_v, H0 (km/s/Mpc, set H0=1 for scale-free case) 0.30000 0.70000 70.00000 Enter Omega_b 0.05000 Initializing power spectrum for Omega_m, Omega_v, H0= 0.30000 0.70000 70.00000 Enter long-wave spectral index n (scale-invariant is n=1) 1.00000 Enter desired normalization at a=1: Qrms-ps/micro-K (if > 0) or -sigma_8 (if < 0) = ? Computing Delta_2(k) using Sachs-Wolfe approxmation This may take several minutes. Qrms-ps/micro-K= 20.5477 I can write the power spectrum of delta_rho/rho to disk (power.dat). If you would like this, please enter kmin and kmax (1/Mpc) Enter 0,0 if you don't want the power spectrum written to a file 1.00000E-02 1.00000E+02 Enter dx (initial particle spacing in Mpc, not Mpc/h) or enter -boxlength in Mpc/h i.e. dx in Mpc if > 0, or -boxlength in Mpc/h if < 0 -50.00000 dx= 2.23214 Mpc Enter 1 if these initial conditions will not be refined, otherwise enter the ultimate refinement factor for the smallest grid spacing (This is used only to set astart.) 1 Scaling initial conditions to starting a= 6.50320E-02 when sigma(delta) at ultimate refinement scale= 2.00000E-01 vfact= 1.50343E+02 Enter 0 for final output or 1 for further refinement 0 Setting output grid to 32 32 32 Enter to skip output grid size Enter to skip output grid offset Enter to skip final grid size Enter to skip final grid offset Will produce output files ic_deltab, ic_velb[xyz], ic_velc[xyz] Subgrid white noise: Choose irand (1 or 2) from the following list: irand=1 to generate new noise and save to file irand=2 to read noise from existing file Enter irand 1 Enter random number seed (9-digit integer, ignored if irand=2) 1234 Enter filename of white noise file (or if irand=0) white-outfile.dat Enter 1 if padding of large scales is required, 0 otherwise 0 Enter padding file name (white noise format, ignored if ipad=0) noisefile_dummy.dat Warning: Generating new random numbers in mpic4! myid,seeds: 0 822569775 Normalizing rms, subtracting average Mean value of the white noise box = -2.25014E-03 Will be removed Standard deviation of the white noise box = 1.00099 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 32768.00000 32767 5.52436E-03 Statistics of ic4 for idim, itide= 0 0 Mean sigma, sampled sigma, maximum= 0.26532 0.26629 1.06960 Reading random numbers used in ic4 from white-outfile.dat Random numbers generated with iseed= 1234 Normalizing rms, subtracting average Mean value of the white noise box = -2.25014E-03 Will be removed Standard deviation of the white noise box = 1.00099 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 32768.00000 32767 5.52436E-03 Statistics of ic4 for idim, itide= 1 0 Mean sigma, sampled sigma, maximum= 0.47112 0.39021 1.45201 Reading random numbers used in ic4 from white-outfile.dat Random numbers generated with iseed= 1234 Normalizing rms, subtracting average Mean value of the white noise box = -2.25014E-03 Will be removed Standard deviation of the white noise box = 1.00099 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 32768.00000 32767 5.52436E-03 Statistics of ic4 for idim, itide= 2 0 Mean sigma, sampled sigma, maximum= 0.47112 0.47917 1.99431 Reading random numbers used in ic4 from white-outfile.dat Random numbers generated with iseed= 1234 Normalizing rms, subtracting average Mean value of the white noise box = -2.25014E-03 Will be removed Standard deviation of the white noise box = 1.00099 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 32768.00000 32767 5.52436E-03 Statistics of ic4 for idim, itide= 3 0 Mean sigma, sampled sigma, maximum= 0.47112 0.54009 2.22725 Reading random numbers used in ic4 from white-outfile.dat Random numbers generated with iseed= 1234 Normalizing rms, subtracting average Mean value of the white noise box = -2.25014E-03 Will be removed Standard deviation of the white noise box = 1.00099 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 32768.00000 32767 5.52436E-03 Statistics of ic4 for idim, itide= 1 0 Mean sigma, sampled sigma, maximum= 0.47112 0.39014 1.45445 Reading random numbers used in ic4 from white-outfile.dat Random numbers generated with iseed= 1234 Normalizing rms, subtracting average Mean value of the white noise box = -2.25014E-03 Will be removed Standard deviation of the white noise box = 1.00099 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 32768.00000 32767 5.52436E-03 Statistics of ic4 for idim, itide= 2 0 Mean sigma, sampled sigma, maximum= 0.47112 0.47911 1.94102 Reading random numbers used in ic4 from white-outfile.dat Random numbers generated with iseed= 1234 Normalizing rms, subtracting average Mean value of the white noise box = -2.25014E-03 Will be removed Standard deviation of the white noise box = 1.00099 Will be factored out so that input stdev=1 ic4 white noise: chisq, dof, nu= 32768.00000 32767 5.52436E-03 Statistics of ic4 for idim, itide= 3 0 Mean sigma, sampled sigma, maximum= 0.47112 0.54004 2.20535 mpgrafic-0.3.15/README000066400000000000000000000024661314565475200142740ustar00rootroot00000000000000mpgrafic - MPI version of Ed Bertschinger initial conditions grafic package Copyright (C) 2008-2017 by Simon Prunet, Christophe Pichon, Boud Roukema prunet iap.fr This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. You should be able to compile with ./configure && make and you will then find the executable src/mpgrafic See Input.input as an example input file, otherwise run mpgrafic interactively. If ./configure fails, then autotools should work. Try instead: autoconf && ./configure && make or autoreconf && ./configure && make See http://www2.iap.fr/users/pichon/mpgrafic.html for documentation. A git development version will soon be available at http://bitbucket.org/broukema/mpgrafic . mpgrafic-0.3.15/TODO000066400000000000000000000023731314565475200141010ustar00rootroot00000000000000* TODO items for mpgrafic development As of v0.3.7 these remain to be done. Tasks done: see NEWS. ** Update to fftw3 [priority: high] update from fftw2 dependence to fftw3 dependence: - help: http://www.fftw.org/doc/Upgrading-from-FFTW-version-2.html - in principle straightforward, but the upgrade has to be done for the mpi, fortran90 version of fftw3 ** Portable modern fortran - kind [priority: medium] replace declarations such as "real(kind=n)", where n is an integer, by more portable values; - https://gcc.gnu.org/onlinedocs/gcc-3.4.6/g77/Kind-Notation.html - https://gcc.gnu.org/onlinedocs/gfortran/KIND-Type-Parameters.html - one line in src/mpnorm.f90, many lines in random.f90 ** Portable fortran-C interfaces - replace number of underscores (ADD0US, ADD1US, ADD2US) in preprocessor defines by ISO_C methods ** Licence GPL-2+ ? [priority: medium] debate/decide: update from GPLv2+ to GPLv3+ ? Why: https://www.gnu.org/licenses/quick-guide-gplv3.html ** Doxygenise [priority: medium] doxygen documentation extractable from source code ** Keep or remove random.f90? [priority: low] debate/decide: retain random.f90 for users unable/unwilling to install GSL? or remove it? ** Yorick scripts [priority: low] mpgrafic-0.3.15/aclocal.m4000066400000000000000000001410501314565475200152450ustar00rootroot00000000000000# generated automatically by aclocal 1.15 -*- Autoconf -*- # Copyright (C) 1996-2014 Free Software Foundation, Inc. # This file is free software; the Free Software Foundation # gives unlimited permission to copy and/or distribute it, # with or without modifications, as long as this notice is preserved. # This program is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY, to the extent permitted by law; without # even the implied warranty of MERCHANTABILITY or FITNESS FOR A # PARTICULAR PURPOSE. m4_ifndef([AC_CONFIG_MACRO_DIRS], [m4_defun([_AM_CONFIG_MACRO_DIRS], [])m4_defun([AC_CONFIG_MACRO_DIRS], [_AM_CONFIG_MACRO_DIRS($@)])]) m4_ifndef([AC_AUTOCONF_VERSION], [m4_copy([m4_PACKAGE_VERSION], [AC_AUTOCONF_VERSION])])dnl m4_if(m4_defn([AC_AUTOCONF_VERSION]), [2.69],, [m4_warning([this file was generated for autoconf 2.69. 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Cummings # # This program is free software: you can redistribute it and/or modify it # under the terms of the GNU General Public License as published by the # Free Software Foundation, either version 3 of the License, or (at your # option) any later version. # # This program is distributed in the hope that it will be useful, but # WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General # Public License for more details. # # You should have received a copy of the GNU General Public License along # with this program. If not, see . # # As a special exception, the respective Autoconf Macro's copyright owner # gives unlimited permission to copy, distribute and modify the configure # scripts that are the output of Autoconf when processing the Macro. You # need not follow the terms of the GNU General Public License when using # or distributing such scripts, even though portions of the text of the # Macro appear in them. The GNU General Public License (GPL) does govern # all other use of the material that constitutes the Autoconf Macro. # # This special exception to the GPL applies to versions of the Autoconf # Macro released by the Autoconf Archive. When you make and distribute a # modified version of the Autoconf Macro, you may extend this special # exception to the GPL to apply to your modified version as well. #serial 8 AU_ALIAS([ACX_MPI], [AX_MPI]) AC_DEFUN([AX_MPI], [ AC_PREREQ(2.50) dnl for AC_LANG_CASE AC_LANG_CASE([C], [ AC_REQUIRE([AC_PROG_CC]) AC_ARG_VAR(MPICC,[MPI C compiler command]) AC_CHECK_PROGS(MPICC, mpicc hcc mpxlc_r mpxlc mpcc cmpicc, $CC) ax_mpi_save_CC="$CC" CC="$MPICC" AC_SUBST(MPICC) ], [C++], [ AC_REQUIRE([AC_PROG_CXX]) AC_ARG_VAR(MPICXX,[MPI C++ compiler command]) AC_CHECK_PROGS(MPICXX, mpic++ mpicxx mpiCC hcp mpxlC_r mpxlC mpCC cmpic++, $CXX) ax_mpi_save_CXX="$CXX" CXX="$MPICXX" AC_SUBST(MPICXX) ], [Fortran 77], [ AC_REQUIRE([AC_PROG_F77]) AC_ARG_VAR(MPIF77,[MPI Fortran 77 compiler command]) AC_CHECK_PROGS(MPIF77, mpif77 hf77 mpxlf_r mpxlf mpf77 cmpifc, $F77) ax_mpi_save_F77="$F77" F77="$MPIF77" AC_SUBST(MPIF77) ], [Fortran], [ AC_REQUIRE([AC_PROG_FC]) AC_ARG_VAR(MPIFC,[MPI Fortran compiler command]) AC_CHECK_PROGS(MPIFC, mpif90 mpxlf95_r mpxlf90_r mpxlf95 mpxlf90 mpf90 cmpif90c, $FC) ax_mpi_save_FC="$FC" FC="$MPIFC" AC_SUBST(MPIFC) ]) if test x = x"$MPILIBS"; then AC_LANG_CASE([C], [AC_CHECK_FUNC(MPI_Init, [MPILIBS=" "])], [C++], [AC_CHECK_FUNC(MPI_Init, [MPILIBS=" "])], [Fortran 77], [AC_MSG_CHECKING([for MPI_Init]) AC_LINK_IFELSE([AC_LANG_PROGRAM([],[ call MPI_Init])],[MPILIBS=" " AC_MSG_RESULT(yes)], [AC_MSG_RESULT(no)])], [Fortran], [AC_MSG_CHECKING([for MPI_Init]) AC_LINK_IFELSE([AC_LANG_PROGRAM([],[ call MPI_Init])],[MPILIBS=" " AC_MSG_RESULT(yes)], [AC_MSG_RESULT(no)])]) fi AC_LANG_CASE([Fortran 77], [ if test x = x"$MPILIBS"; then AC_CHECK_LIB(fmpi, MPI_Init, [MPILIBS="-lfmpi"]) fi if test x = x"$MPILIBS"; then AC_CHECK_LIB(fmpich, MPI_Init, [MPILIBS="-lfmpich"]) fi ], [Fortran], [ if test x = x"$MPILIBS"; then AC_CHECK_LIB(fmpi, MPI_Init, [MPILIBS="-lfmpi"]) fi if test x = x"$MPILIBS"; then AC_CHECK_LIB(mpichf90, MPI_Init, [MPILIBS="-lmpichf90"]) fi ]) if test x = x"$MPILIBS"; then AC_CHECK_LIB(mpi, MPI_Init, [MPILIBS="-lmpi"]) fi if test x = x"$MPILIBS"; then AC_CHECK_LIB(mpich, MPI_Init, [MPILIBS="-lmpich"]) fi dnl We have to use AC_TRY_COMPILE and not AC_CHECK_HEADER because the dnl latter uses $CPP, not $CC (which may be mpicc). 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ALPHA_CPU_TYPE=`/usr/sbin/psrinfo -v | sed -n -e 's/^ The alpha \(.*\) processor.*$/\1/p' | head -n 1` case "$ALPHA_CPU_TYPE" in "EV4 (21064)") UNAME_MACHINE="alpha" ;; "EV4.5 (21064)") UNAME_MACHINE="alpha" ;; "LCA4 (21066/21068)") UNAME_MACHINE="alpha" ;; "EV5 (21164)") UNAME_MACHINE="alphaev5" ;; "EV5.6 (21164A)") UNAME_MACHINE="alphaev56" ;; "EV5.6 (21164PC)") UNAME_MACHINE="alphapca56" ;; "EV5.7 (21164PC)") UNAME_MACHINE="alphapca57" ;; "EV6 (21264)") UNAME_MACHINE="alphaev6" ;; "EV6.7 (21264A)") UNAME_MACHINE="alphaev67" ;; "EV6.8CB (21264C)") UNAME_MACHINE="alphaev68" ;; "EV6.8AL (21264B)") UNAME_MACHINE="alphaev68" ;; "EV6.8CX (21264D)") UNAME_MACHINE="alphaev68" ;; "EV6.9A (21264/EV69A)") UNAME_MACHINE="alphaev69" ;; "EV7 (21364)") UNAME_MACHINE="alphaev7" ;; "EV7.9 (21364A)") UNAME_MACHINE="alphaev79" ;; esac # A Pn.n version is a patched version. # A Vn.n version is a released version. # A Tn.n version is a released field test version. # A Xn.n version is an unreleased experimental baselevel. # 1.2 uses "1.2" for uname -r. echo ${UNAME_MACHINE}-dec-osf`echo ${UNAME_RELEASE} | sed -e 's/^[PVTX]//' | tr 'ABCDEFGHIJKLMNOPQRSTUVWXYZ' 'abcdefghijklmnopqrstuvwxyz'` # Reset EXIT trap before exiting to avoid spurious non-zero exit code. exitcode=$? trap '' 0 exit $exitcode ;; Alpha\ *:Windows_NT*:*) # How do we know it's Interix rather than the generic POSIX subsystem? # Should we change UNAME_MACHINE based on the output of uname instead # of the specific Alpha model? echo alpha-pc-interix exit ;; 21064:Windows_NT:50:3) echo alpha-dec-winnt3.5 exit ;; Amiga*:UNIX_System_V:4.0:*) echo m68k-unknown-sysv4 exit ;; *:[Aa]miga[Oo][Ss]:*:*) echo ${UNAME_MACHINE}-unknown-amigaos exit ;; *:[Mm]orph[Oo][Ss]:*:*) echo ${UNAME_MACHINE}-unknown-morphos exit ;; *:OS/390:*:*) echo i370-ibm-openedition exit ;; *:z/VM:*:*) echo s390-ibm-zvmoe exit ;; *:OS400:*:*) echo powerpc-ibm-os400 exit ;; arm:RISC*:1.[012]*:*|arm:riscix:1.[012]*:*) echo arm-acorn-riscix${UNAME_RELEASE} exit ;; arm*:riscos:*:*|arm*:RISCOS:*:*) echo arm-unknown-riscos exit ;; SR2?01:HI-UX/MPP:*:* | SR8000:HI-UX/MPP:*:*) echo hppa1.1-hitachi-hiuxmpp exit ;; Pyramid*:OSx*:*:* | MIS*:OSx*:*:* | MIS*:SMP_DC-OSx*:*:*) # akee@wpdis03.wpafb.af.mil (Earle F. Ake) contributed MIS and NILE. if test "`(/bin/universe) 2>/dev/null`" = att ; then echo pyramid-pyramid-sysv3 else echo pyramid-pyramid-bsd fi exit ;; NILE*:*:*:dcosx) echo pyramid-pyramid-svr4 exit ;; DRS?6000:unix:4.0:6*) echo sparc-icl-nx6 exit ;; DRS?6000:UNIX_SV:4.2*:7* | DRS?6000:isis:4.2*:7*) case `/usr/bin/uname -p` in sparc) echo sparc-icl-nx7; exit ;; esac ;; s390x:SunOS:*:*) echo ${UNAME_MACHINE}-ibm-solaris2`echo ${UNAME_RELEASE}|sed -e 's/[^.]*//'` exit ;; sun4H:SunOS:5.*:*) echo sparc-hal-solaris2`echo ${UNAME_RELEASE}|sed -e 's/[^.]*//'` exit ;; sun4*:SunOS:5.*:* | tadpole*:SunOS:5.*:*) echo sparc-sun-solaris2`echo ${UNAME_RELEASE}|sed -e 's/[^.]*//'` exit ;; i86pc:AuroraUX:5.*:* | i86xen:AuroraUX:5.*:*) echo i386-pc-auroraux${UNAME_RELEASE} exit ;; i86pc:SunOS:5.*:* | i86xen:SunOS:5.*:*) eval $set_cc_for_build SUN_ARCH="i386" # If there is a compiler, see if it is configured for 64-bit objects. # Note that the Sun cc does not turn __LP64__ into 1 like gcc does. # This test works for both compilers. if [ "$CC_FOR_BUILD" != 'no_compiler_found' ]; then if (echo '#ifdef __amd64'; echo IS_64BIT_ARCH; echo '#endif') | \ (CCOPTS= $CC_FOR_BUILD -E - 2>/dev/null) | \ grep IS_64BIT_ARCH >/dev/null then SUN_ARCH="x86_64" fi fi echo ${SUN_ARCH}-pc-solaris2`echo ${UNAME_RELEASE}|sed -e 's/[^.]*//'` exit ;; sun4*:SunOS:6*:*) # According to config.sub, this is the proper way to canonicalize # SunOS6. Hard to guess exactly what SunOS6 will be like, but # it's likely to be more like Solaris than SunOS4. echo sparc-sun-solaris3`echo ${UNAME_RELEASE}|sed -e 's/[^.]*//'` exit ;; sun4*:SunOS:*:*) case "`/usr/bin/arch -k`" in Series*|S4*) UNAME_RELEASE=`uname -v` ;; esac # Japanese Language versions have a version number like `4.1.3-JL'. echo sparc-sun-sunos`echo ${UNAME_RELEASE}|sed -e 's/-/_/'` exit ;; sun3*:SunOS:*:*) echo m68k-sun-sunos${UNAME_RELEASE} exit ;; sun*:*:4.2BSD:*) UNAME_RELEASE=`(sed 1q /etc/motd | awk '{print substr($5,1,3)}') 2>/dev/null` test "x${UNAME_RELEASE}" = "x" && UNAME_RELEASE=3 case "`/bin/arch`" in sun3) echo m68k-sun-sunos${UNAME_RELEASE} ;; sun4) echo sparc-sun-sunos${UNAME_RELEASE} ;; esac exit ;; aushp:SunOS:*:*) echo sparc-auspex-sunos${UNAME_RELEASE} exit ;; # The situation for MiNT is a little confusing. The machine name # can be virtually everything (everything which is not # "atarist" or "atariste" at least should have a processor # > m68000). The system name ranges from "MiNT" over "FreeMiNT" # to the lowercase version "mint" (or "freemint"). Finally # the system name "TOS" denotes a system which is actually not # MiNT. But MiNT is downward compatible to TOS, so this should # be no problem. atarist[e]:*MiNT:*:* | atarist[e]:*mint:*:* | atarist[e]:*TOS:*:*) echo m68k-atari-mint${UNAME_RELEASE} exit ;; atari*:*MiNT:*:* | atari*:*mint:*:* | atarist[e]:*TOS:*:*) echo m68k-atari-mint${UNAME_RELEASE} exit ;; *falcon*:*MiNT:*:* | *falcon*:*mint:*:* | *falcon*:*TOS:*:*) echo m68k-atari-mint${UNAME_RELEASE} exit ;; milan*:*MiNT:*:* | milan*:*mint:*:* | *milan*:*TOS:*:*) echo m68k-milan-mint${UNAME_RELEASE} exit ;; hades*:*MiNT:*:* | hades*:*mint:*:* | *hades*:*TOS:*:*) echo m68k-hades-mint${UNAME_RELEASE} exit ;; *:*MiNT:*:* | *:*mint:*:* | *:*TOS:*:*) echo m68k-unknown-mint${UNAME_RELEASE} exit ;; m68k:machten:*:*) echo m68k-apple-machten${UNAME_RELEASE} exit ;; powerpc:machten:*:*) echo powerpc-apple-machten${UNAME_RELEASE} exit ;; RISC*:Mach:*:*) echo mips-dec-mach_bsd4.3 exit ;; RISC*:ULTRIX:*:*) echo mips-dec-ultrix${UNAME_RELEASE} exit ;; VAX*:ULTRIX*:*:*) echo vax-dec-ultrix${UNAME_RELEASE} exit ;; 2020:CLIX:*:* | 2430:CLIX:*:*) echo clipper-intergraph-clix${UNAME_RELEASE} exit ;; mips:*:*:UMIPS | mips:*:*:RISCos) eval $set_cc_for_build sed 's/^ //' << EOF >$dummy.c #ifdef __cplusplus #include /* for printf() prototype */ int main (int argc, char *argv[]) { #else int main (argc, argv) int argc; char *argv[]; { #endif #if defined (host_mips) && defined (MIPSEB) #if defined (SYSTYPE_SYSV) printf ("mips-mips-riscos%ssysv\n", argv[1]); exit (0); #endif #if defined (SYSTYPE_SVR4) printf ("mips-mips-riscos%ssvr4\n", argv[1]); exit (0); #endif #if defined (SYSTYPE_BSD43) || defined(SYSTYPE_BSD) printf ("mips-mips-riscos%sbsd\n", argv[1]); exit (0); #endif #endif exit (-1); } EOF $CC_FOR_BUILD -o $dummy $dummy.c && dummyarg=`echo "${UNAME_RELEASE}" | sed -n 's/\([0-9]*\).*/\1/p'` && SYSTEM_NAME=`$dummy $dummyarg` && { echo "$SYSTEM_NAME"; exit; } echo mips-mips-riscos${UNAME_RELEASE} exit ;; Motorola:PowerMAX_OS:*:*) echo powerpc-motorola-powermax exit ;; Motorola:*:4.3:PL8-*) echo powerpc-harris-powermax exit ;; Night_Hawk:*:*:PowerMAX_OS | Synergy:PowerMAX_OS:*:*) echo powerpc-harris-powermax exit ;; Night_Hawk:Power_UNIX:*:*) echo powerpc-harris-powerunix exit ;; m88k:CX/UX:7*:*) echo m88k-harris-cxux7 exit ;; m88k:*:4*:R4*) echo m88k-motorola-sysv4 exit ;; m88k:*:3*:R3*) echo m88k-motorola-sysv3 exit ;; AViiON:dgux:*:*) # DG/UX returns AViiON for all architectures UNAME_PROCESSOR=`/usr/bin/uname -p` if [ $UNAME_PROCESSOR = mc88100 ] || [ $UNAME_PROCESSOR = mc88110 ] then if [ ${TARGET_BINARY_INTERFACE}x = m88kdguxelfx ] || \ [ ${TARGET_BINARY_INTERFACE}x = x ] then echo m88k-dg-dgux${UNAME_RELEASE} else echo m88k-dg-dguxbcs${UNAME_RELEASE} fi else echo i586-dg-dgux${UNAME_RELEASE} fi exit ;; M88*:DolphinOS:*:*) # DolphinOS (SVR3) echo m88k-dolphin-sysv3 exit ;; M88*:*:R3*:*) # Delta 88k system running SVR3 echo m88k-motorola-sysv3 exit ;; XD88*:*:*:*) # Tektronix XD88 system running UTekV (SVR3) echo m88k-tektronix-sysv3 exit ;; Tek43[0-9][0-9]:UTek:*:*) # Tektronix 4300 system running UTek (BSD) echo m68k-tektronix-bsd exit ;; *:IRIX*:*:*) echo mips-sgi-irix`echo ${UNAME_RELEASE}|sed -e 's/-/_/g'` exit ;; ????????:AIX?:[12].1:2) # AIX 2.2.1 or AIX 2.1.1 is RT/PC AIX. echo romp-ibm-aix # uname -m gives an 8 hex-code CPU id exit ;; # Note that: echo "'`uname -s`'" gives 'AIX ' i*86:AIX:*:*) echo i386-ibm-aix exit ;; ia64:AIX:*:*) if [ -x /usr/bin/oslevel ] ; then IBM_REV=`/usr/bin/oslevel` else IBM_REV=${UNAME_VERSION}.${UNAME_RELEASE} fi echo ${UNAME_MACHINE}-ibm-aix${IBM_REV} exit ;; *:AIX:2:3) if grep bos325 /usr/include/stdio.h >/dev/null 2>&1; then eval $set_cc_for_build sed 's/^ //' << EOF >$dummy.c #include main() { if (!__power_pc()) exit(1); puts("powerpc-ibm-aix3.2.5"); exit(0); } EOF if $CC_FOR_BUILD -o $dummy $dummy.c && SYSTEM_NAME=`$dummy` then echo "$SYSTEM_NAME" else echo rs6000-ibm-aix3.2.5 fi elif grep bos324 /usr/include/stdio.h >/dev/null 2>&1; then echo rs6000-ibm-aix3.2.4 else echo rs6000-ibm-aix3.2 fi exit ;; *:AIX:*:[4567]) IBM_CPU_ID=`/usr/sbin/lsdev -C -c processor -S available | sed 1q | awk '{ print $1 }'` if /usr/sbin/lsattr -El ${IBM_CPU_ID} | grep ' POWER' >/dev/null 2>&1; then IBM_ARCH=rs6000 else IBM_ARCH=powerpc fi if [ -x /usr/bin/oslevel ] ; then IBM_REV=`/usr/bin/oslevel` else IBM_REV=${UNAME_VERSION}.${UNAME_RELEASE} fi echo ${IBM_ARCH}-ibm-aix${IBM_REV} exit ;; *:AIX:*:*) echo rs6000-ibm-aix exit ;; ibmrt:4.4BSD:*|romp-ibm:BSD:*) echo romp-ibm-bsd4.4 exit ;; ibmrt:*BSD:*|romp-ibm:BSD:*) # covers RT/PC BSD and echo romp-ibm-bsd${UNAME_RELEASE} # 4.3 with uname added to exit ;; # report: romp-ibm BSD 4.3 *:BOSX:*:*) echo rs6000-bull-bosx exit ;; DPX/2?00:B.O.S.:*:*) echo m68k-bull-sysv3 exit ;; 9000/[34]??:4.3bsd:1.*:*) echo m68k-hp-bsd exit ;; hp300:4.4BSD:*:* | 9000/[34]??:4.3bsd:2.*:*) echo m68k-hp-bsd4.4 exit ;; 9000/[34678]??:HP-UX:*:*) HPUX_REV=`echo ${UNAME_RELEASE}|sed -e 's/[^.]*.[0B]*//'` case "${UNAME_MACHINE}" in 9000/31? ) HP_ARCH=m68000 ;; 9000/[34]?? ) HP_ARCH=m68k ;; 9000/[678][0-9][0-9]) if [ -x /usr/bin/getconf ]; then sc_cpu_version=`/usr/bin/getconf SC_CPU_VERSION 2>/dev/null` sc_kernel_bits=`/usr/bin/getconf SC_KERNEL_BITS 2>/dev/null` case "${sc_cpu_version}" in 523) HP_ARCH="hppa1.0" ;; # CPU_PA_RISC1_0 528) HP_ARCH="hppa1.1" ;; # CPU_PA_RISC1_1 532) # CPU_PA_RISC2_0 case "${sc_kernel_bits}" in 32) HP_ARCH="hppa2.0n" ;; 64) HP_ARCH="hppa2.0w" ;; '') HP_ARCH="hppa2.0" ;; # HP-UX 10.20 esac ;; esac fi if [ "${HP_ARCH}" = "" ]; then eval $set_cc_for_build sed 's/^ //' << EOF >$dummy.c #define _HPUX_SOURCE #include #include int main () { #if defined(_SC_KERNEL_BITS) long bits = sysconf(_SC_KERNEL_BITS); #endif long cpu = sysconf (_SC_CPU_VERSION); switch (cpu) { case CPU_PA_RISC1_0: puts ("hppa1.0"); break; case CPU_PA_RISC1_1: puts ("hppa1.1"); break; case CPU_PA_RISC2_0: #if defined(_SC_KERNEL_BITS) switch (bits) { case 64: puts ("hppa2.0w"); break; case 32: puts ("hppa2.0n"); break; default: puts ("hppa2.0"); break; } break; #else /* !defined(_SC_KERNEL_BITS) */ puts ("hppa2.0"); break; #endif default: puts ("hppa1.0"); break; } exit (0); } EOF (CCOPTS= $CC_FOR_BUILD -o $dummy $dummy.c 2>/dev/null) && HP_ARCH=`$dummy` test -z "$HP_ARCH" && HP_ARCH=hppa fi ;; esac if [ ${HP_ARCH} = "hppa2.0w" ] then eval $set_cc_for_build # hppa2.0w-hp-hpux* has a 64-bit kernel and a compiler generating # 32-bit code. hppa64-hp-hpux* has the same kernel and a compiler # generating 64-bit code. GNU and HP use different nomenclature: # # $ CC_FOR_BUILD=cc ./config.guess # => hppa2.0w-hp-hpux11.23 # $ CC_FOR_BUILD="cc +DA2.0w" ./config.guess # => hppa64-hp-hpux11.23 if echo __LP64__ | (CCOPTS= $CC_FOR_BUILD -E - 2>/dev/null) | grep -q __LP64__ then HP_ARCH="hppa2.0w" else HP_ARCH="hppa64" fi fi echo ${HP_ARCH}-hp-hpux${HPUX_REV} exit ;; ia64:HP-UX:*:*) HPUX_REV=`echo ${UNAME_RELEASE}|sed -e 's/[^.]*.[0B]*//'` echo ia64-hp-hpux${HPUX_REV} exit ;; 3050*:HI-UX:*:*) eval $set_cc_for_build sed 's/^ //' << EOF >$dummy.c #include int main () { long cpu = sysconf (_SC_CPU_VERSION); /* The order matters, because CPU_IS_HP_MC68K erroneously returns true for CPU_PA_RISC1_0. CPU_IS_PA_RISC returns correct results, however. */ if (CPU_IS_PA_RISC (cpu)) { switch (cpu) { case CPU_PA_RISC1_0: puts ("hppa1.0-hitachi-hiuxwe2"); break; case CPU_PA_RISC1_1: puts ("hppa1.1-hitachi-hiuxwe2"); break; case CPU_PA_RISC2_0: puts ("hppa2.0-hitachi-hiuxwe2"); break; default: puts ("hppa-hitachi-hiuxwe2"); break; } } else if (CPU_IS_HP_MC68K (cpu)) puts ("m68k-hitachi-hiuxwe2"); else puts ("unknown-hitachi-hiuxwe2"); exit (0); } EOF $CC_FOR_BUILD -o $dummy $dummy.c && SYSTEM_NAME=`$dummy` && { echo "$SYSTEM_NAME"; exit; } echo unknown-hitachi-hiuxwe2 exit ;; 9000/7??:4.3bsd:*:* | 9000/8?[79]:4.3bsd:*:* ) echo hppa1.1-hp-bsd exit ;; 9000/8??:4.3bsd:*:*) echo hppa1.0-hp-bsd exit ;; *9??*:MPE/iX:*:* | *3000*:MPE/iX:*:*) echo hppa1.0-hp-mpeix exit ;; hp7??:OSF1:*:* | hp8?[79]:OSF1:*:* ) echo hppa1.1-hp-osf exit ;; hp8??:OSF1:*:*) echo hppa1.0-hp-osf exit ;; i*86:OSF1:*:*) if [ -x /usr/sbin/sysversion ] ; then echo ${UNAME_MACHINE}-unknown-osf1mk else echo ${UNAME_MACHINE}-unknown-osf1 fi exit ;; parisc*:Lites*:*:*) echo hppa1.1-hp-lites exit ;; C1*:ConvexOS:*:* | convex:ConvexOS:C1*:*) echo c1-convex-bsd exit ;; C2*:ConvexOS:*:* | convex:ConvexOS:C2*:*) if getsysinfo -f scalar_acc then echo c32-convex-bsd else echo c2-convex-bsd fi exit ;; C34*:ConvexOS:*:* | convex:ConvexOS:C34*:*) echo c34-convex-bsd exit ;; C38*:ConvexOS:*:* | convex:ConvexOS:C38*:*) echo c38-convex-bsd exit ;; C4*:ConvexOS:*:* | convex:ConvexOS:C4*:*) echo c4-convex-bsd exit ;; CRAY*Y-MP:*:*:*) echo ymp-cray-unicos${UNAME_RELEASE} | sed -e 's/\.[^.]*$/.X/' exit ;; CRAY*[A-Z]90:*:*:*) echo ${UNAME_MACHINE}-cray-unicos${UNAME_RELEASE} \ | sed -e 's/CRAY.*\([A-Z]90\)/\1/' \ -e y/ABCDEFGHIJKLMNOPQRSTUVWXYZ/abcdefghijklmnopqrstuvwxyz/ \ -e 's/\.[^.]*$/.X/' exit ;; CRAY*TS:*:*:*) echo t90-cray-unicos${UNAME_RELEASE} | sed -e 's/\.[^.]*$/.X/' exit ;; CRAY*T3E:*:*:*) echo alphaev5-cray-unicosmk${UNAME_RELEASE} | sed -e 's/\.[^.]*$/.X/' exit ;; CRAY*SV1:*:*:*) echo sv1-cray-unicos${UNAME_RELEASE} | sed -e 's/\.[^.]*$/.X/' exit ;; *:UNICOS/mp:*:*) echo craynv-cray-unicosmp${UNAME_RELEASE} | sed -e 's/\.[^.]*$/.X/' exit ;; F30[01]:UNIX_System_V:*:* | F700:UNIX_System_V:*:*) FUJITSU_PROC=`uname -m | tr 'ABCDEFGHIJKLMNOPQRSTUVWXYZ' 'abcdefghijklmnopqrstuvwxyz'` FUJITSU_SYS=`uname -p | tr 'ABCDEFGHIJKLMNOPQRSTUVWXYZ' 'abcdefghijklmnopqrstuvwxyz' | sed -e 's/\///'` FUJITSU_REL=`echo ${UNAME_RELEASE} | sed -e 's/ /_/'` echo "${FUJITSU_PROC}-fujitsu-${FUJITSU_SYS}${FUJITSU_REL}" exit ;; 5000:UNIX_System_V:4.*:*) FUJITSU_SYS=`uname -p | tr 'ABCDEFGHIJKLMNOPQRSTUVWXYZ' 'abcdefghijklmnopqrstuvwxyz' | sed -e 's/\///'` FUJITSU_REL=`echo ${UNAME_RELEASE} | tr 'ABCDEFGHIJKLMNOPQRSTUVWXYZ' 'abcdefghijklmnopqrstuvwxyz' | sed -e 's/ /_/'` echo "sparc-fujitsu-${FUJITSU_SYS}${FUJITSU_REL}" exit ;; i*86:BSD/386:*:* | i*86:BSD/OS:*:* | *:Ascend\ Embedded/OS:*:*) echo ${UNAME_MACHINE}-pc-bsdi${UNAME_RELEASE} exit ;; sparc*:BSD/OS:*:*) echo sparc-unknown-bsdi${UNAME_RELEASE} exit ;; *:BSD/OS:*:*) echo ${UNAME_MACHINE}-unknown-bsdi${UNAME_RELEASE} exit ;; *:FreeBSD:*:*) UNAME_PROCESSOR=`/usr/bin/uname -p` case ${UNAME_PROCESSOR} in amd64) echo x86_64-unknown-freebsd`echo ${UNAME_RELEASE}|sed -e 's/[-(].*//'` ;; *) echo ${UNAME_PROCESSOR}-unknown-freebsd`echo ${UNAME_RELEASE}|sed -e 's/[-(].*//'` ;; esac exit ;; i*:CYGWIN*:*) echo ${UNAME_MACHINE}-pc-cygwin exit ;; *:MINGW64*:*) echo ${UNAME_MACHINE}-pc-mingw64 exit ;; *:MINGW*:*) echo ${UNAME_MACHINE}-pc-mingw32 exit ;; *:MSYS*:*) echo ${UNAME_MACHINE}-pc-msys exit ;; i*:windows32*:*) # uname -m includes "-pc" on this system. echo ${UNAME_MACHINE}-mingw32 exit ;; i*:PW*:*) echo ${UNAME_MACHINE}-pc-pw32 exit ;; *:Interix*:*) case ${UNAME_MACHINE} in x86) echo i586-pc-interix${UNAME_RELEASE} exit ;; authenticamd | genuineintel | EM64T) echo x86_64-unknown-interix${UNAME_RELEASE} exit ;; IA64) echo ia64-unknown-interix${UNAME_RELEASE} exit ;; esac ;; [345]86:Windows_95:* | [345]86:Windows_98:* | [345]86:Windows_NT:*) echo i${UNAME_MACHINE}-pc-mks exit ;; 8664:Windows_NT:*) echo x86_64-pc-mks exit ;; i*:Windows_NT*:* | Pentium*:Windows_NT*:*) # How do we know it's Interix rather than the generic POSIX subsystem? # It also conflicts with pre-2.0 versions of AT&T UWIN. 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EV56) UNAME_MACHINE=alphaev56 ;; PCA56) UNAME_MACHINE=alphapca56 ;; PCA57) UNAME_MACHINE=alphapca56 ;; EV6) UNAME_MACHINE=alphaev6 ;; EV67) UNAME_MACHINE=alphaev67 ;; EV68*) UNAME_MACHINE=alphaev68 ;; esac objdump --private-headers /bin/sh | grep -q ld.so.1 if test "$?" = 0 ; then LIBC="gnulibc1" ; fi echo ${UNAME_MACHINE}-unknown-linux-${LIBC} exit ;; arc:Linux:*:* | arceb:Linux:*:*) echo ${UNAME_MACHINE}-unknown-linux-${LIBC} exit ;; arm*:Linux:*:*) eval $set_cc_for_build if echo __ARM_EABI__ | $CC_FOR_BUILD -E - 2>/dev/null \ | grep -q __ARM_EABI__ then echo ${UNAME_MACHINE}-unknown-linux-${LIBC} else if echo __ARM_PCS_VFP | $CC_FOR_BUILD -E - 2>/dev/null \ | grep -q __ARM_PCS_VFP then echo ${UNAME_MACHINE}-unknown-linux-${LIBC}eabi else echo ${UNAME_MACHINE}-unknown-linux-${LIBC}eabihf fi fi exit ;; avr32*:Linux:*:*) echo ${UNAME_MACHINE}-unknown-linux-${LIBC} exit ;; cris:Linux:*:*) echo ${UNAME_MACHINE}-axis-linux-${LIBC} exit ;; crisv32:Linux:*:*) echo ${UNAME_MACHINE}-axis-linux-${LIBC} exit ;; 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i*86:LynxOS:2.*:* | i*86:LynxOS:3.[01]*:* | i*86:LynxOS:4.[02]*:*) echo i386-unknown-lynxos${UNAME_RELEASE} exit ;; i*86:*DOS:*:*) echo ${UNAME_MACHINE}-pc-msdosdjgpp exit ;; i*86:*:4.*:* | i*86:SYSTEM_V:4.*:*) UNAME_REL=`echo ${UNAME_RELEASE} | sed 's/\/MP$//'` if grep Novell /usr/include/link.h >/dev/null 2>/dev/null; then echo ${UNAME_MACHINE}-univel-sysv${UNAME_REL} else echo ${UNAME_MACHINE}-pc-sysv${UNAME_REL} fi exit ;; i*86:*:5:[678]*) # UnixWare 7.x, OpenUNIX and OpenServer 6. case `/bin/uname -X | grep "^Machine"` in *486*) UNAME_MACHINE=i486 ;; *Pentium) UNAME_MACHINE=i586 ;; *Pent*|*Celeron) UNAME_MACHINE=i686 ;; esac echo ${UNAME_MACHINE}-unknown-sysv${UNAME_RELEASE}${UNAME_SYSTEM}${UNAME_VERSION} exit ;; i*86:*:3.2:*) if test -f /usr/options/cb.name; then UNAME_REL=`sed -n 's/.*Version //p' /dev/null >/dev/null ; then UNAME_REL=`(/bin/uname -X|grep Release|sed -e 's/.*= //')` (/bin/uname -X|grep i80486 >/dev/null) && UNAME_MACHINE=i486 (/bin/uname -X|grep '^Machine.*Pentium' >/dev/null) \ && UNAME_MACHINE=i586 (/bin/uname -X|grep '^Machine.*Pent *II' >/dev/null) \ && UNAME_MACHINE=i686 (/bin/uname -X|grep '^Machine.*Pentium Pro' >/dev/null) \ && UNAME_MACHINE=i686 echo ${UNAME_MACHINE}-pc-sco$UNAME_REL else echo ${UNAME_MACHINE}-pc-sysv32 fi exit ;; pc:*:*:*) # Left here for compatibility: # uname -m prints for DJGPP always 'pc', but it prints nothing about # the processor, so we play safe by assuming i586. # Note: whatever this is, it MUST be the same as what config.sub # prints for the "djgpp" host, or else GDB configury will decide that # this is a cross-build. echo i586-pc-msdosdjgpp exit ;; Intel:Mach:3*:*) echo i386-pc-mach3 exit ;; paragon:*:*:*) echo i860-intel-osf1 exit ;; i860:*:4.*:*) # i860-SVR4 if grep Stardent /usr/include/sys/uadmin.h >/dev/null 2>&1 ; then echo i860-stardent-sysv${UNAME_RELEASE} # Stardent Vistra i860-SVR4 else # Add other i860-SVR4 vendors below as they are discovered. echo i860-unknown-sysv${UNAME_RELEASE} # Unknown i860-SVR4 fi exit ;; mini*:CTIX:SYS*5:*) # "miniframe" echo m68010-convergent-sysv exit ;; mc68k:UNIX:SYSTEM5:3.51m) echo m68k-convergent-sysv exit ;; M680?0:D-NIX:5.3:*) echo m68k-diab-dnix exit ;; M68*:*:R3V[5678]*:*) test -r /sysV68 && { echo 'm68k-motorola-sysv'; exit; } ;; 3[345]??:*:4.0:3.0 | 3[34]??A:*:4.0:3.0 | 3[34]??,*:*:4.0:3.0 | 3[34]??/*:*:4.0:3.0 | 4400:*:4.0:3.0 | 4850:*:4.0:3.0 | SKA40:*:4.0:3.0 | SDS2:*:4.0:3.0 | SHG2:*:4.0:3.0 | S7501*:*:4.0:3.0) OS_REL='' test -r /etc/.relid \ && OS_REL=.`sed -n 's/[^ ]* [^ ]* \([0-9][0-9]\).*/\1/p' < /etc/.relid` /bin/uname -p 2>/dev/null | grep 86 >/dev/null \ && { echo i486-ncr-sysv4.3${OS_REL}; exit; } /bin/uname -p 2>/dev/null | /bin/grep entium >/dev/null \ && { echo i586-ncr-sysv4.3${OS_REL}; exit; } ;; 3[34]??:*:4.0:* | 3[34]??,*:*:4.0:*) /bin/uname -p 2>/dev/null | grep 86 >/dev/null \ && { echo i486-ncr-sysv4; exit; } ;; NCR*:*:4.2:* | MPRAS*:*:4.2:*) OS_REL='.3' test -r /etc/.relid \ && OS_REL=.`sed -n 's/[^ ]* [^ ]* \([0-9][0-9]\).*/\1/p' < /etc/.relid` /bin/uname -p 2>/dev/null | grep 86 >/dev/null \ && { echo i486-ncr-sysv4.3${OS_REL}; exit; } /bin/uname -p 2>/dev/null | /bin/grep entium >/dev/null \ && { echo i586-ncr-sysv4.3${OS_REL}; exit; } /bin/uname -p 2>/dev/null | /bin/grep pteron >/dev/null \ && { echo i586-ncr-sysv4.3${OS_REL}; exit; } ;; m68*:LynxOS:2.*:* | m68*:LynxOS:3.0*:*) echo m68k-unknown-lynxos${UNAME_RELEASE} exit ;; mc68030:UNIX_System_V:4.*:*) echo m68k-atari-sysv4 exit ;; TSUNAMI:LynxOS:2.*:*) echo sparc-unknown-lynxos${UNAME_RELEASE} exit ;; rs6000:LynxOS:2.*:*) echo rs6000-unknown-lynxos${UNAME_RELEASE} exit ;; PowerPC:LynxOS:2.*:* | PowerPC:LynxOS:3.[01]*:* | PowerPC:LynxOS:4.[02]*:*) echo powerpc-unknown-lynxos${UNAME_RELEASE} exit ;; SM[BE]S:UNIX_SV:*:*) echo mips-dde-sysv${UNAME_RELEASE} exit ;; RM*:ReliantUNIX-*:*:*) echo mips-sni-sysv4 exit ;; RM*:SINIX-*:*:*) echo mips-sni-sysv4 exit ;; *:SINIX-*:*:*) if uname -p 2>/dev/null >/dev/null ; then UNAME_MACHINE=`(uname -p) 2>/dev/null` echo ${UNAME_MACHINE}-sni-sysv4 else echo ns32k-sni-sysv fi exit ;; PENTIUM:*:4.0*:*) # Unisys `ClearPath HMP IX 4000' SVR4/MP effort # says echo i586-unisys-sysv4 exit ;; *:UNIX_System_V:4*:FTX*) # From Gerald Hewes . # How about differentiating between stratus architectures? -djm echo hppa1.1-stratus-sysv4 exit ;; *:*:*:FTX*) # From seanf@swdc.stratus.com. echo i860-stratus-sysv4 exit ;; i*86:VOS:*:*) # From Paul.Green@stratus.com. echo ${UNAME_MACHINE}-stratus-vos exit ;; *:VOS:*:*) # From Paul.Green@stratus.com. echo hppa1.1-stratus-vos exit ;; mc68*:A/UX:*:*) echo m68k-apple-aux${UNAME_RELEASE} exit ;; news*:NEWS-OS:6*:*) echo mips-sony-newsos6 exit ;; R[34]000:*System_V*:*:* | R4000:UNIX_SYSV:*:* | R*000:UNIX_SV:*:*) if [ -d /usr/nec ]; then echo mips-nec-sysv${UNAME_RELEASE} else echo mips-unknown-sysv${UNAME_RELEASE} fi exit ;; BeBox:BeOS:*:*) # BeOS running on hardware made by Be, PPC only. echo powerpc-be-beos exit ;; BeMac:BeOS:*:*) # BeOS running on Mac or Mac clone, PPC only. echo powerpc-apple-beos exit ;; BePC:BeOS:*:*) # BeOS running on Intel PC compatible. echo i586-pc-beos exit ;; BePC:Haiku:*:*) # Haiku running on Intel PC compatible. echo i586-pc-haiku exit ;; x86_64:Haiku:*:*) echo x86_64-unknown-haiku exit ;; SX-4:SUPER-UX:*:*) echo sx4-nec-superux${UNAME_RELEASE} exit ;; SX-5:SUPER-UX:*:*) echo sx5-nec-superux${UNAME_RELEASE} exit ;; SX-6:SUPER-UX:*:*) echo sx6-nec-superux${UNAME_RELEASE} exit ;; SX-7:SUPER-UX:*:*) echo sx7-nec-superux${UNAME_RELEASE} exit ;; SX-8:SUPER-UX:*:*) echo sx8-nec-superux${UNAME_RELEASE} exit ;; SX-8R:SUPER-UX:*:*) echo sx8r-nec-superux${UNAME_RELEASE} exit ;; Power*:Rhapsody:*:*) echo powerpc-apple-rhapsody${UNAME_RELEASE} exit ;; *:Rhapsody:*:*) echo ${UNAME_MACHINE}-apple-rhapsody${UNAME_RELEASE} exit ;; *:Darwin:*:*) UNAME_PROCESSOR=`uname -p` || UNAME_PROCESSOR=unknown eval $set_cc_for_build if test "$UNAME_PROCESSOR" = unknown ; then UNAME_PROCESSOR=powerpc fi if test `echo "$UNAME_RELEASE" | sed -e 's/\..*//'` -le 10 ; then if [ "$CC_FOR_BUILD" != 'no_compiler_found' ]; then if (echo '#ifdef __LP64__'; echo IS_64BIT_ARCH; echo '#endif') | \ (CCOPTS= $CC_FOR_BUILD -E - 2>/dev/null) | \ grep IS_64BIT_ARCH >/dev/null then case $UNAME_PROCESSOR in i386) UNAME_PROCESSOR=x86_64 ;; powerpc) UNAME_PROCESSOR=powerpc64 ;; esac fi fi elif test "$UNAME_PROCESSOR" = i386 ; then # Avoid executing cc on OS X 10.9, as it ships with a stub # that puts up a graphical alert prompting to install # developer tools. Any system running Mac OS X 10.7 or # later (Darwin 11 and later) is required to have a 64-bit # processor. This is not true of the ARM version of Darwin # that Apple uses in portable devices. UNAME_PROCESSOR=x86_64 fi echo ${UNAME_PROCESSOR}-apple-darwin${UNAME_RELEASE} exit ;; *:procnto*:*:* | *:QNX:[0123456789]*:*) UNAME_PROCESSOR=`uname -p` if test "$UNAME_PROCESSOR" = "x86"; then UNAME_PROCESSOR=i386 UNAME_MACHINE=pc fi echo ${UNAME_PROCESSOR}-${UNAME_MACHINE}-nto-qnx${UNAME_RELEASE} exit ;; *:QNX:*:4*) echo i386-pc-qnx exit ;; NEO-?:NONSTOP_KERNEL:*:*) echo neo-tandem-nsk${UNAME_RELEASE} exit ;; NSE-*:NONSTOP_KERNEL:*:*) echo nse-tandem-nsk${UNAME_RELEASE} exit ;; NSR-?:NONSTOP_KERNEL:*:*) echo nsr-tandem-nsk${UNAME_RELEASE} exit ;; *:NonStop-UX:*:*) echo mips-compaq-nonstopux exit ;; BS2000:POSIX*:*:*) echo bs2000-siemens-sysv exit ;; DS/*:UNIX_System_V:*:*) echo ${UNAME_MACHINE}-${UNAME_SYSTEM}-${UNAME_RELEASE} exit ;; *:Plan9:*:*) # "uname -m" is not consistent, so use $cputype instead. 386 # is converted to i386 for consistency with other x86 # operating systems. if test "$cputype" = "386"; then UNAME_MACHINE=i386 else UNAME_MACHINE="$cputype" fi echo ${UNAME_MACHINE}-unknown-plan9 exit ;; *:TOPS-10:*:*) echo pdp10-unknown-tops10 exit ;; *:TENEX:*:*) echo pdp10-unknown-tenex exit ;; KS10:TOPS-20:*:* | KL10:TOPS-20:*:* | TYPE4:TOPS-20:*:*) echo pdp10-dec-tops20 exit ;; XKL-1:TOPS-20:*:* | TYPE5:TOPS-20:*:*) echo pdp10-xkl-tops20 exit ;; *:TOPS-20:*:*) echo pdp10-unknown-tops20 exit ;; *:ITS:*:*) echo pdp10-unknown-its exit ;; SEI:*:*:SEIUX) echo mips-sei-seiux${UNAME_RELEASE} exit ;; *:DragonFly:*:*) echo ${UNAME_MACHINE}-unknown-dragonfly`echo ${UNAME_RELEASE}|sed -e 's/[-(].*//'` exit ;; *:*VMS:*:*) UNAME_MACHINE=`(uname -p) 2>/dev/null` case "${UNAME_MACHINE}" in A*) echo alpha-dec-vms ; exit ;; I*) echo ia64-dec-vms ; exit ;; V*) echo vax-dec-vms ; exit ;; esac ;; *:XENIX:*:SysV) echo i386-pc-xenix exit ;; i*86:skyos:*:*) echo ${UNAME_MACHINE}-pc-skyos`echo ${UNAME_RELEASE}` | sed -e 's/ .*$//' exit ;; i*86:rdos:*:*) echo ${UNAME_MACHINE}-pc-rdos exit ;; i*86:AROS:*:*) echo ${UNAME_MACHINE}-pc-aros exit ;; x86_64:VMkernel:*:*) echo ${UNAME_MACHINE}-unknown-esx exit ;; esac cat >&2 < in order to provide the needed information to handle your system. config.guess timestamp = $timestamp uname -m = `(uname -m) 2>/dev/null || echo unknown` uname -r = `(uname -r) 2>/dev/null || echo unknown` uname -s = `(uname -s) 2>/dev/null || echo unknown` uname -v = `(uname -v) 2>/dev/null || echo unknown` /usr/bin/uname -p = `(/usr/bin/uname -p) 2>/dev/null` /bin/uname -X = `(/bin/uname -X) 2>/dev/null` hostinfo = `(hostinfo) 2>/dev/null` /bin/universe = `(/bin/universe) 2>/dev/null` /usr/bin/arch -k = `(/usr/bin/arch -k) 2>/dev/null` /bin/arch = `(/bin/arch) 2>/dev/null` /usr/bin/oslevel = `(/usr/bin/oslevel) 2>/dev/null` /usr/convex/getsysinfo = `(/usr/convex/getsysinfo) 2>/dev/null` UNAME_MACHINE = ${UNAME_MACHINE} UNAME_RELEASE = ${UNAME_RELEASE} UNAME_SYSTEM = ${UNAME_SYSTEM} UNAME_VERSION = ${UNAME_VERSION} EOF exit 1 # Local variables: # eval: (add-hook 'write-file-hooks 'time-stamp) # time-stamp-start: "timestamp='" # time-stamp-format: "%:y-%02m-%02d" # time-stamp-end: "'" # End: mpgrafic-0.3.15/config.h.in000066400000000000000000000023141314565475200154270ustar00rootroot00000000000000/* config.h.in. Generated from configure.ac by autoheader. */ /* Define to 1 if you have the `gcc' library (-lgcc). */ #undef HAVE_LIBGCC /* Define to 1 if you have the `gsl' library (-lgsl). */ #undef HAVE_LIBGSL /* Define to 1 if you have the `gslcblas' library (-lgslcblas). */ #undef HAVE_LIBGSLCBLAS /* Define if you have the MPI library. */ #undef HAVE_MPI /* Name of package */ #undef PACKAGE /* Define to the address where bug reports for this package should be sent. */ #undef PACKAGE_BUGREPORT /* Define to the full name of this package. */ #undef PACKAGE_NAME /* Define to the full name and version of this package. */ #undef PACKAGE_STRING /* Define to the one symbol short name of this package. */ #undef PACKAGE_TARNAME /* Define to the home page for this package. */ #undef PACKAGE_URL /* Define to the version of this package. */ #undef PACKAGE_VERSION /* Version number of package */ #undef VERSION /* Enable large inode numbers on Mac OS X 10.5. */ #ifndef _DARWIN_USE_64_BIT_INODE # define _DARWIN_USE_64_BIT_INODE 1 #endif /* Number of bits in a file offset, on hosts where this is settable. */ #undef _FILE_OFFSET_BITS /* Define for large files, on AIX-style hosts. */ #undef _LARGE_FILES mpgrafic-0.3.15/config.sub000077500000000000000000001057751314565475200154060ustar00rootroot00000000000000#! /bin/sh # Configuration validation subroutine script. # Copyright 1992-2014 Free Software Foundation, Inc. timestamp='2014-09-11' # This file is free software; you can redistribute it and/or modify it # under the terms of the GNU General Public License as published by # the Free Software Foundation; either version 3 of the License, or # (at your option) any later version. # # This program is distributed in the hope that it will be useful, but # WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU # General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program; if not, see . # # As a special exception to the GNU General Public License, if you # distribute this file as part of a program that contains a # configuration script generated by Autoconf, you may include it under # the same distribution terms that you use for the rest of that # program. This Exception is an additional permission under section 7 # of the GNU General Public License, version 3 ("GPLv3"). # Please send patches with a ChangeLog entry to config-patches@gnu.org. # # Configuration subroutine to validate and canonicalize a configuration type. # Supply the specified configuration type as an argument. # If it is invalid, we print an error message on stderr and exit with code 1. # Otherwise, we print the canonical config type on stdout and succeed. # You can get the latest version of this script from: # http://git.savannah.gnu.org/gitweb/?p=config.git;a=blob_plain;f=config.sub;hb=HEAD # This file is supposed to be the same for all GNU packages # and recognize all the CPU types, system types and aliases # that are meaningful with *any* GNU software. # Each package is responsible for reporting which valid configurations # it does not support. The user should be able to distinguish # a failure to support a valid configuration from a meaningless # configuration. # The goal of this file is to map all the various variations of a given # machine specification into a single specification in the form: # CPU_TYPE-MANUFACTURER-OPERATING_SYSTEM # or in some cases, the newer four-part form: # CPU_TYPE-MANUFACTURER-KERNEL-OPERATING_SYSTEM # It is wrong to echo any other type of specification. me=`echo "$0" | sed -e 's,.*/,,'` usage="\ Usage: $0 [OPTION] CPU-MFR-OPSYS $0 [OPTION] ALIAS Canonicalize a configuration name. Operation modes: -h, --help print this help, then exit -t, --time-stamp print date of last modification, then exit -v, --version print version number, then exit Report bugs and patches to ." version="\ GNU config.sub ($timestamp) Copyright 1992-2014 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE." help=" Try \`$me --help' for more information." # Parse command line while test $# -gt 0 ; do case $1 in --time-stamp | --time* | -t ) echo "$timestamp" ; exit ;; --version | -v ) echo "$version" ; exit ;; --help | --h* | -h ) echo "$usage"; exit ;; -- ) # Stop option processing shift; break ;; - ) # Use stdin as input. break ;; -* ) echo "$me: invalid option $1$help" exit 1 ;; *local*) # First pass through any local machine types. echo $1 exit ;; * ) break ;; esac done case $# in 0) echo "$me: missing argument$help" >&2 exit 1;; 1) ;; *) echo "$me: too many arguments$help" >&2 exit 1;; esac # Separate what the user gave into CPU-COMPANY and OS or KERNEL-OS (if any). # Here we must recognize all the valid KERNEL-OS combinations. maybe_os=`echo $1 | sed 's/^\(.*\)-\([^-]*-[^-]*\)$/\2/'` case $maybe_os in nto-qnx* | linux-gnu* | linux-android* | linux-dietlibc | linux-newlib* | \ linux-musl* | linux-uclibc* | uclinux-uclibc* | uclinux-gnu* | kfreebsd*-gnu* | \ knetbsd*-gnu* | netbsd*-gnu* | \ kopensolaris*-gnu* | \ storm-chaos* | os2-emx* | rtmk-nova*) os=-$maybe_os basic_machine=`echo $1 | sed 's/^\(.*\)-\([^-]*-[^-]*\)$/\1/'` ;; android-linux) os=-linux-android basic_machine=`echo $1 | sed 's/^\(.*\)-\([^-]*-[^-]*\)$/\1/'`-unknown ;; *) basic_machine=`echo $1 | sed 's/-[^-]*$//'` if [ $basic_machine != $1 ] then os=`echo $1 | sed 's/.*-/-/'` else os=; fi ;; esac ### Let's recognize common machines as not being operating systems so ### that things like config.sub decstation-3100 work. We also ### recognize some manufacturers as not being operating systems, so we ### can provide default operating systems below. case $os in -sun*os*) # Prevent following clause from handling this invalid input. ;; -dec* | -mips* | -sequent* | -encore* | -pc532* | -sgi* | -sony* | \ -att* | -7300* | -3300* | -delta* | -motorola* | -sun[234]* | \ -unicom* | -ibm* | -next | -hp | -isi* | -apollo | -altos* | \ -convergent* | -ncr* | -news | -32* | -3600* | -3100* | -hitachi* |\ -c[123]* | -convex* | -sun | -crds | -omron* | -dg | -ultra | -tti* | \ -harris | -dolphin | -highlevel | -gould | -cbm | -ns | -masscomp | \ -apple | -axis | -knuth | -cray | -microblaze*) os= basic_machine=$1 ;; -bluegene*) os=-cnk ;; -sim | -cisco | -oki | -wec | -winbond) os= basic_machine=$1 ;; -scout) ;; -wrs) os=-vxworks basic_machine=$1 ;; -chorusos*) os=-chorusos basic_machine=$1 ;; -chorusrdb) os=-chorusrdb basic_machine=$1 ;; -hiux*) os=-hiuxwe2 ;; -sco6) os=-sco5v6 basic_machine=`echo $1 | sed -e 's/86-.*/86-pc/'` ;; -sco5) os=-sco3.2v5 basic_machine=`echo $1 | sed -e 's/86-.*/86-pc/'` ;; -sco4) os=-sco3.2v4 basic_machine=`echo $1 | sed -e 's/86-.*/86-pc/'` ;; -sco3.2.[4-9]*) os=`echo $os | sed -e 's/sco3.2./sco3.2v/'` basic_machine=`echo $1 | sed -e 's/86-.*/86-pc/'` ;; -sco3.2v[4-9]*) # Don't forget version if it is 3.2v4 or newer. basic_machine=`echo $1 | sed -e 's/86-.*/86-pc/'` ;; -sco5v6*) # Don't forget version if it is 3.2v4 or newer. basic_machine=`echo $1 | sed -e 's/86-.*/86-pc/'` ;; -sco*) os=-sco3.2v2 basic_machine=`echo $1 | sed -e 's/86-.*/86-pc/'` ;; -udk*) basic_machine=`echo $1 | sed -e 's/86-.*/86-pc/'` ;; -isc) os=-isc2.2 basic_machine=`echo $1 | sed -e 's/86-.*/86-pc/'` ;; -clix*) basic_machine=clipper-intergraph ;; -isc*) basic_machine=`echo $1 | sed -e 's/86-.*/86-pc/'` ;; -lynx*178) os=-lynxos178 ;; -lynx*5) os=-lynxos5 ;; -lynx*) os=-lynxos ;; -ptx*) basic_machine=`echo $1 | sed -e 's/86-.*/86-sequent/'` ;; -windowsnt*) os=`echo $os | sed -e 's/windowsnt/winnt/'` ;; -psos*) os=-psos ;; -mint | -mint[0-9]*) basic_machine=m68k-atari os=-mint ;; esac # Decode aliases for certain CPU-COMPANY combinations. case $basic_machine in # Recognize the basic CPU types without company name. # Some are omitted here because they have special meanings below. 1750a | 580 \ | a29k \ | aarch64 | aarch64_be \ | alpha | alphaev[4-8] | alphaev56 | alphaev6[78] | alphapca5[67] \ | alpha64 | alpha64ev[4-8] | alpha64ev56 | alpha64ev6[78] | alpha64pca5[67] \ | am33_2.0 \ | arc | arceb \ | arm | arm[bl]e | arme[lb] | armv[2-8] | armv[3-8][lb] | armv7[arm] \ | avr | avr32 \ | be32 | be64 \ | bfin \ | c4x | c8051 | clipper \ | d10v | d30v | dlx | dsp16xx \ | epiphany \ | fido | fr30 | frv \ | h8300 | h8500 | hppa | hppa1.[01] | hppa2.0 | hppa2.0[nw] | hppa64 \ | hexagon \ | i370 | i860 | i960 | ia64 \ | ip2k | iq2000 \ | k1om \ | le32 | le64 \ | lm32 \ | m32c | m32r | m32rle | m68000 | m68k | m88k \ | maxq | mb | microblaze | microblazeel | mcore | mep | metag \ | mips | mipsbe | mipseb | mipsel | mipsle \ | mips16 \ | mips64 | mips64el \ | mips64octeon | mips64octeonel \ | mips64orion | mips64orionel \ | mips64r5900 | mips64r5900el \ | mips64vr | mips64vrel \ | mips64vr4100 | mips64vr4100el \ | mips64vr4300 | mips64vr4300el \ | mips64vr5000 | mips64vr5000el \ | mips64vr5900 | mips64vr5900el \ | mipsisa32 | mipsisa32el \ | mipsisa32r2 | mipsisa32r2el \ | mipsisa32r6 | mipsisa32r6el \ | mipsisa64 | mipsisa64el \ | mipsisa64r2 | mipsisa64r2el \ | mipsisa64r6 | mipsisa64r6el \ | mipsisa64sb1 | mipsisa64sb1el \ | mipsisa64sr71k | mipsisa64sr71kel \ | mipsr5900 | mipsr5900el \ | mipstx39 | mipstx39el \ | mn10200 | mn10300 \ | moxie \ | mt \ | msp430 \ | nds32 | nds32le | nds32be \ | nios | nios2 | nios2eb | nios2el \ | ns16k | ns32k \ | open8 | or1k | or1knd | or32 \ | pdp10 | pdp11 | pj | pjl \ | powerpc | powerpc64 | powerpc64le | powerpcle \ | pyramid \ | riscv32 | riscv64 \ | rl78 | rx \ | score \ | sh | sh[1234] | sh[24]a | sh[24]aeb | sh[23]e | sh[34]eb | sheb | shbe | shle | sh[1234]le | sh3ele \ | sh64 | sh64le \ | sparc | sparc64 | sparc64b | sparc64v | sparc86x | sparclet | sparclite \ | sparcv8 | sparcv9 | sparcv9b | sparcv9v \ | spu \ | tahoe | tic4x | tic54x | tic55x | tic6x | tic80 | tron \ | ubicom32 \ | v850 | v850e | v850e1 | v850e2 | v850es | v850e2v3 \ | we32k \ | x86 | xc16x | xstormy16 | xtensa \ | z8k | z80) basic_machine=$basic_machine-unknown ;; c54x) basic_machine=tic54x-unknown ;; c55x) basic_machine=tic55x-unknown ;; c6x) basic_machine=tic6x-unknown ;; m6811 | m68hc11 | m6812 | m68hc12 | m68hcs12x | nvptx | picochip) basic_machine=$basic_machine-unknown os=-none ;; m88110 | m680[12346]0 | m683?2 | m68360 | m5200 | v70 | w65 | z8k) ;; ms1) basic_machine=mt-unknown ;; strongarm | thumb | xscale) basic_machine=arm-unknown ;; xgate) basic_machine=$basic_machine-unknown os=-none ;; xscaleeb) basic_machine=armeb-unknown ;; xscaleel) basic_machine=armel-unknown ;; # We use `pc' rather than `unknown' # because (1) that's what they normally are, and # (2) the word "unknown" tends to confuse beginning users. i*86 | x86_64) basic_machine=$basic_machine-pc ;; # Object if more than one company name word. *-*-*) echo Invalid configuration \`$1\': machine \`$basic_machine\' not recognized 1>&2 exit 1 ;; # Recognize the basic CPU types with company name. 580-* \ | a29k-* \ | aarch64-* | aarch64_be-* \ | alpha-* | alphaev[4-8]-* | alphaev56-* | alphaev6[78]-* \ | alpha64-* | alpha64ev[4-8]-* | alpha64ev56-* | alpha64ev6[78]-* \ | alphapca5[67]-* | alpha64pca5[67]-* | arc-* | arceb-* \ | arm-* | armbe-* | armle-* | armeb-* | armv*-* \ | avr-* | avr32-* \ | be32-* | be64-* \ | bfin-* | bs2000-* \ | c[123]* | c30-* | [cjt]90-* | c4x-* \ | c8051-* | clipper-* | craynv-* | cydra-* \ | d10v-* | d30v-* | dlx-* \ | elxsi-* \ | f30[01]-* | f700-* | fido-* | fr30-* | frv-* | fx80-* \ | h8300-* | h8500-* \ | hppa-* | hppa1.[01]-* | hppa2.0-* | hppa2.0[nw]-* | hppa64-* \ | hexagon-* \ | i*86-* | i860-* | i960-* | ia64-* \ | ip2k-* | iq2000-* \ | k1om-* \ | le32-* | le64-* \ | lm32-* \ | m32c-* | m32r-* | m32rle-* \ | m68000-* | m680[012346]0-* | m68360-* | m683?2-* | m68k-* \ | m88110-* | m88k-* | maxq-* | mcore-* | metag-* \ | microblaze-* | microblazeel-* \ | mips-* | mipsbe-* | mipseb-* | mipsel-* | mipsle-* \ | mips16-* \ | mips64-* | mips64el-* \ | mips64octeon-* | mips64octeonel-* \ | mips64orion-* | mips64orionel-* \ | mips64r5900-* | mips64r5900el-* \ | mips64vr-* | mips64vrel-* \ | mips64vr4100-* | mips64vr4100el-* \ | mips64vr4300-* | mips64vr4300el-* \ | mips64vr5000-* | mips64vr5000el-* \ | mips64vr5900-* | mips64vr5900el-* \ | mipsisa32-* | mipsisa32el-* \ | mipsisa32r2-* | mipsisa32r2el-* \ | mipsisa32r6-* | mipsisa32r6el-* \ | mipsisa64-* | mipsisa64el-* \ | mipsisa64r2-* | mipsisa64r2el-* \ | mipsisa64r6-* | mipsisa64r6el-* \ | mipsisa64sb1-* | mipsisa64sb1el-* \ | mipsisa64sr71k-* | mipsisa64sr71kel-* \ | mipsr5900-* | mipsr5900el-* \ | mipstx39-* | mipstx39el-* \ | mmix-* \ | mt-* \ | msp430-* \ | nds32-* | nds32le-* | nds32be-* \ | nios-* | nios2-* | nios2eb-* | nios2el-* \ | none-* | np1-* | ns16k-* | ns32k-* \ | open8-* \ | or1k*-* \ | orion-* \ | pdp10-* | pdp11-* | pj-* | pjl-* | pn-* | power-* \ | powerpc-* | powerpc64-* | powerpc64le-* | powerpcle-* \ | pyramid-* \ | rl78-* | romp-* | rs6000-* | rx-* \ | sh-* | sh[1234]-* | sh[24]a-* | sh[24]aeb-* | sh[23]e-* | sh[34]eb-* | sheb-* | shbe-* \ | shle-* | sh[1234]le-* | sh3ele-* | sh64-* | sh64le-* \ | sparc-* | sparc64-* | sparc64b-* | sparc64v-* | sparc86x-* | sparclet-* \ | sparclite-* \ | sparcv8-* | sparcv9-* | sparcv9b-* | sparcv9v-* | sv1-* | sx?-* \ | tahoe-* \ | tic30-* | tic4x-* | tic54x-* | tic55x-* | tic6x-* | tic80-* \ | tile*-* \ | tron-* \ | ubicom32-* \ | v850-* | v850e-* | v850e1-* | v850es-* | v850e2-* | v850e2v3-* \ | vax-* \ | we32k-* \ | x86-* | x86_64-* | xc16x-* | xps100-* \ | xstormy16-* | xtensa*-* \ | ymp-* \ | z8k-* | z80-*) ;; # Recognize the basic CPU types without company name, with glob match. xtensa*) basic_machine=$basic_machine-unknown ;; # Recognize the various machine names and aliases which stand # for a CPU type and a company and sometimes even an OS. 386bsd) basic_machine=i386-unknown os=-bsd ;; 3b1 | 7300 | 7300-att | att-7300 | pc7300 | safari | unixpc) basic_machine=m68000-att ;; 3b*) basic_machine=we32k-att ;; a29khif) basic_machine=a29k-amd os=-udi ;; abacus) basic_machine=abacus-unknown ;; adobe68k) basic_machine=m68010-adobe os=-scout ;; alliant | fx80) basic_machine=fx80-alliant ;; altos | altos3068) basic_machine=m68k-altos ;; am29k) basic_machine=a29k-none os=-bsd ;; amd64) basic_machine=x86_64-pc ;; amd64-*) basic_machine=x86_64-`echo $basic_machine | sed 's/^[^-]*-//'` ;; amdahl) basic_machine=580-amdahl os=-sysv ;; amiga | amiga-*) basic_machine=m68k-unknown ;; amigaos | amigados) basic_machine=m68k-unknown os=-amigaos ;; amigaunix | amix) basic_machine=m68k-unknown os=-sysv4 ;; apollo68) basic_machine=m68k-apollo os=-sysv ;; apollo68bsd) basic_machine=m68k-apollo os=-bsd ;; aros) basic_machine=i386-pc os=-aros ;; aux) basic_machine=m68k-apple os=-aux ;; balance) basic_machine=ns32k-sequent os=-dynix ;; blackfin) basic_machine=bfin-unknown os=-linux ;; blackfin-*) basic_machine=bfin-`echo $basic_machine | sed 's/^[^-]*-//'` os=-linux ;; bluegene*) basic_machine=powerpc-ibm os=-cnk ;; c54x-*) basic_machine=tic54x-`echo $basic_machine | sed 's/^[^-]*-//'` ;; c55x-*) basic_machine=tic55x-`echo $basic_machine | sed 's/^[^-]*-//'` ;; c6x-*) basic_machine=tic6x-`echo $basic_machine | sed 's/^[^-]*-//'` ;; c90) basic_machine=c90-cray os=-unicos ;; cegcc) basic_machine=arm-unknown os=-cegcc ;; convex-c1) basic_machine=c1-convex os=-bsd ;; convex-c2) basic_machine=c2-convex os=-bsd ;; convex-c32) basic_machine=c32-convex os=-bsd ;; convex-c34) basic_machine=c34-convex os=-bsd ;; convex-c38) basic_machine=c38-convex os=-bsd ;; cray | j90) basic_machine=j90-cray os=-unicos ;; craynv) basic_machine=craynv-cray os=-unicosmp ;; cr16 | cr16-*) basic_machine=cr16-unknown os=-elf ;; crds | unos) basic_machine=m68k-crds ;; crisv32 | crisv32-* | etraxfs*) basic_machine=crisv32-axis ;; cris | cris-* | etrax*) basic_machine=cris-axis ;; crx) basic_machine=crx-unknown os=-elf ;; da30 | da30-*) basic_machine=m68k-da30 ;; decstation | decstation-3100 | pmax | pmax-* | pmin | dec3100 | decstatn) basic_machine=mips-dec ;; decsystem10* | dec10*) basic_machine=pdp10-dec os=-tops10 ;; decsystem20* | dec20*) basic_machine=pdp10-dec os=-tops20 ;; delta | 3300 | motorola-3300 | motorola-delta \ | 3300-motorola | delta-motorola) basic_machine=m68k-motorola ;; delta88) basic_machine=m88k-motorola os=-sysv3 ;; dicos) basic_machine=i686-pc os=-dicos ;; djgpp) basic_machine=i586-pc os=-msdosdjgpp ;; dpx20 | dpx20-*) basic_machine=rs6000-bull os=-bosx ;; dpx2* | dpx2*-bull) basic_machine=m68k-bull os=-sysv3 ;; ebmon29k) basic_machine=a29k-amd os=-ebmon ;; elxsi) basic_machine=elxsi-elxsi os=-bsd ;; encore | umax | mmax) basic_machine=ns32k-encore ;; es1800 | OSE68k | ose68k | ose | OSE) basic_machine=m68k-ericsson os=-ose ;; fx2800) basic_machine=i860-alliant ;; genix) basic_machine=ns32k-ns ;; gmicro) basic_machine=tron-gmicro os=-sysv ;; go32) basic_machine=i386-pc os=-go32 ;; h3050r* | hiux*) basic_machine=hppa1.1-hitachi os=-hiuxwe2 ;; h8300hms) basic_machine=h8300-hitachi os=-hms ;; h8300xray) basic_machine=h8300-hitachi os=-xray ;; h8500hms) basic_machine=h8500-hitachi os=-hms ;; harris) basic_machine=m88k-harris os=-sysv3 ;; hp300-*) basic_machine=m68k-hp ;; hp300bsd) basic_machine=m68k-hp os=-bsd ;; hp300hpux) basic_machine=m68k-hp os=-hpux ;; hp3k9[0-9][0-9] | hp9[0-9][0-9]) basic_machine=hppa1.0-hp ;; hp9k2[0-9][0-9] | hp9k31[0-9]) basic_machine=m68000-hp ;; hp9k3[2-9][0-9]) basic_machine=m68k-hp ;; hp9k6[0-9][0-9] | hp6[0-9][0-9]) basic_machine=hppa1.0-hp ;; hp9k7[0-79][0-9] | hp7[0-79][0-9]) basic_machine=hppa1.1-hp ;; hp9k78[0-9] | hp78[0-9]) # FIXME: really hppa2.0-hp basic_machine=hppa1.1-hp ;; hp9k8[67]1 | hp8[67]1 | hp9k80[24] | hp80[24] | hp9k8[78]9 | hp8[78]9 | hp9k893 | hp893) # FIXME: really hppa2.0-hp basic_machine=hppa1.1-hp ;; hp9k8[0-9][13679] | hp8[0-9][13679]) basic_machine=hppa1.1-hp ;; hp9k8[0-9][0-9] | hp8[0-9][0-9]) basic_machine=hppa1.0-hp ;; hppa-next) os=-nextstep3 ;; hppaosf) basic_machine=hppa1.1-hp os=-osf ;; hppro) basic_machine=hppa1.1-hp os=-proelf ;; i370-ibm* | ibm*) basic_machine=i370-ibm ;; i*86v32) basic_machine=`echo $1 | sed -e 's/86.*/86-pc/'` os=-sysv32 ;; i*86v4*) basic_machine=`echo $1 | sed -e 's/86.*/86-pc/'` os=-sysv4 ;; i*86v) basic_machine=`echo $1 | sed -e 's/86.*/86-pc/'` os=-sysv ;; i*86sol2) basic_machine=`echo $1 | sed -e 's/86.*/86-pc/'` os=-solaris2 ;; i386mach) basic_machine=i386-mach os=-mach ;; i386-vsta | vsta) basic_machine=i386-unknown os=-vsta ;; iris | iris4d) basic_machine=mips-sgi case $os in -irix*) ;; *) os=-irix4 ;; esac ;; isi68 | isi) basic_machine=m68k-isi os=-sysv ;; m68knommu) basic_machine=m68k-unknown os=-linux ;; m68knommu-*) basic_machine=m68k-`echo $basic_machine | sed 's/^[^-]*-//'` os=-linux ;; m88k-omron*) basic_machine=m88k-omron ;; magnum | m3230) basic_machine=mips-mips os=-sysv ;; merlin) basic_machine=ns32k-utek os=-sysv ;; microblaze*) basic_machine=microblaze-xilinx ;; mingw64) basic_machine=x86_64-pc os=-mingw64 ;; mingw32) basic_machine=i686-pc os=-mingw32 ;; mingw32ce) basic_machine=arm-unknown os=-mingw32ce ;; miniframe) basic_machine=m68000-convergent ;; *mint | -mint[0-9]* | *MiNT | *MiNT[0-9]*) basic_machine=m68k-atari os=-mint ;; mips3*-*) basic_machine=`echo $basic_machine | sed -e 's/mips3/mips64/'` ;; mips3*) basic_machine=`echo $basic_machine | sed -e 's/mips3/mips64/'`-unknown ;; monitor) basic_machine=m68k-rom68k os=-coff ;; morphos) basic_machine=powerpc-unknown os=-morphos ;; moxiebox) basic_machine=moxie-unknown os=-moxiebox ;; msdos) basic_machine=i386-pc os=-msdos ;; ms1-*) basic_machine=`echo $basic_machine | sed -e 's/ms1-/mt-/'` ;; msys) basic_machine=i686-pc os=-msys ;; mvs) basic_machine=i370-ibm os=-mvs ;; nacl) basic_machine=le32-unknown os=-nacl ;; ncr3000) basic_machine=i486-ncr os=-sysv4 ;; netbsd386) basic_machine=i386-unknown os=-netbsd ;; netwinder) basic_machine=armv4l-rebel os=-linux ;; news | news700 | news800 | news900) basic_machine=m68k-sony os=-newsos ;; news1000) basic_machine=m68030-sony os=-newsos ;; news-3600 | risc-news) basic_machine=mips-sony os=-newsos ;; necv70) basic_machine=v70-nec os=-sysv ;; next | m*-next ) basic_machine=m68k-next case $os in -nextstep* ) ;; -ns2*) os=-nextstep2 ;; *) os=-nextstep3 ;; esac ;; nh3000) basic_machine=m68k-harris os=-cxux ;; nh[45]000) basic_machine=m88k-harris os=-cxux ;; nindy960) basic_machine=i960-intel os=-nindy ;; mon960) basic_machine=i960-intel os=-mon960 ;; nonstopux) basic_machine=mips-compaq os=-nonstopux ;; np1) basic_machine=np1-gould ;; neo-tandem) basic_machine=neo-tandem ;; nse-tandem) basic_machine=nse-tandem ;; nsr-tandem) basic_machine=nsr-tandem ;; op50n-* | op60c-*) basic_machine=hppa1.1-oki os=-proelf ;; openrisc | openrisc-*) basic_machine=or32-unknown ;; os400) basic_machine=powerpc-ibm os=-os400 ;; OSE68000 | ose68000) basic_machine=m68000-ericsson os=-ose ;; 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" >&6; } if ${ac_cv_lib_sfftw_fftw3d_f77_create_plan+:} false; then : $as_echo_n "(cached) " >&6 else ac_check_lib_save_LIBS=$LIBS LIBS="-lsfftw $LIBS" cat > conftest.$ac_ext <<_ACEOF program main call fftw3d_f77_create_plan end _ACEOF if ac_fn_f77_try_link "$LINENO"; then : ac_cv_lib_sfftw_fftw3d_f77_create_plan=yes else ac_cv_lib_sfftw_fftw3d_f77_create_plan=no fi rm -f core conftest.err conftest.$ac_objext \ conftest$ac_exeext conftest.$ac_ext LIBS=$ac_check_lib_save_LIBS fi { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_sfftw_fftw3d_f77_create_plan" >&5 $as_echo "$ac_cv_lib_sfftw_fftw3d_f77_create_plan" >&6; } if test "x$ac_cv_lib_sfftw_fftw3d_f77_create_plan" = xyes; then : FFTWPREC=s PRECISION=DOUB else { $as_echo "$as_me:${as_lineno-$LINENO}: checking for fftw3d_f77_create_plan in -lfftw" >&5 $as_echo_n "checking for fftw3d_f77_create_plan in -lfftw... 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You need to have the (double precision) fftw library." exit -1 fi fi fi ac_ext=c ac_cpp='$CPP $CPPFLAGS' ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5' ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5' ac_compiler_gnu=$ac_cv_c_compiler_gnu ac_ext=c ac_cpp='$CPP $CPPFLAGS' ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5' ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5' ac_compiler_gnu=$ac_cv_c_compiler_gnu if test -n "$ac_tool_prefix"; then # Extract the first word of "${ac_tool_prefix}gcc", so it can be a program name with args. set dummy ${ac_tool_prefix}gcc; ac_word=$2 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5 $as_echo_n "checking for $ac_word... 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" >&6; } if ${ac_cv_prog_CC+:} false; then : $as_echo_n "(cached) " >&6 else if test -n "$CC"; then ac_cv_prog_CC="$CC" # Let the user override the test. else as_save_IFS=$IFS; IFS=$PATH_SEPARATOR for as_dir in $PATH do IFS=$as_save_IFS test -z "$as_dir" && as_dir=. for ac_exec_ext in '' $ac_executable_extensions; do if as_fn_executable_p "$as_dir/$ac_word$ac_exec_ext"; then ac_cv_prog_CC="${ac_tool_prefix}cc" $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5 break 2 fi done done IFS=$as_save_IFS fi fi CC=$ac_cv_prog_CC if test -n "$CC"; then { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5 $as_echo "$CC" >&6; } else { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5 $as_echo "no" >&6; } fi fi fi if test -z "$CC"; then # Extract the first word of "cc", so it can be a program name with args. set dummy cc; ac_word=$2 { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5 $as_echo_n "checking for $ac_word... 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You need to have the (single precision) fftw library." exit -1 ]) ]) else AC_CHECK_LIB(dfftw,fftw3d_f77_create_plan,[ FFTWPREC=d PRECISION=DOUB ],[ AC_CHECK_LIB(fftw,fftw3d_f77_create_plan,[ FFTWPREC= PRECISION=DOUB ],[ echo "Error! You need to have the (double precision) fftw library." exit -1 ]) ]) fi AC_SUBST(FFTWPREC) AC_SUBST(PRECISION) AC_LANG_C AC_PROG_CC AC_CHECK_LIB(gcc,main,, [AC_MSG_WARN(Could not find libgcc) ]) AC_CHECK_LIB(gslcblas,cblas_dgemv) AC_CHECK_LIB(gsl,gsl_spline_init,, [AC_MSG_ERROR(Could not find gsl. Hint (1) find /usr -name "*gsl*" -print Hint (2) install gsl*.a e.g. from http://www.gnu.org/software/gsl/ and put it in /usr/local/lib/ or set environment variable LDFLAGS to be -L/my/directory/lib/ with the library and CFLAGS to be -I/my/directory/include for the include files.) ]) # needed for rfftw3d_mpi_create_plan_c_wrap.c AX_MPI CC="$MPICC" AC_SUBST(MPICC) AC_CONFIG_FILES([Makefile src/Makefile]) AC_OUTPUT mpgrafic-0.3.15/copyright000066400000000000000000000041341314565475200153410ustar00rootroot00000000000000Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: mpgrafic Upstream-Contact: Boud Roukema (boud cosmo.torun.pl) Source: https://broukema@bitbucket.org/broukema/mpgrafic.git Files: * Copyright: 2008-2016, Simon Prunet (prunet iap.fr) 2008-2016, Christophe Pichon 2016-2017, Boud Roukema License: GPL-v2+ This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. . This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this package; if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA . On Debian systems, the full text of the GNU General Public License version 2 can be found in the file `/usr/share/common-licenses/GPL-2'. Files: debian/* Copyright: 2016-2017, Boud Roukema (boud-debian cosmo.torun.pl) License: GPL-v2+ This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. . This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this package; if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA . On Debian systems, the full text of the GNU General Public License version 2 can be found in the file `/usr/share/common-licenses/GPL-2'. mpgrafic-0.3.15/depcomp000077500000000000000000000560161314565475200147710ustar00rootroot00000000000000#! /bin/sh # depcomp - compile a program generating dependencies as side-effects scriptversion=2013-05-30.07; # UTC # Copyright (C) 1999-2013 Free Software Foundation, Inc. # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation; either version 2, or (at your option) # any later version. # This program is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # You should have received a copy of the GNU General Public License # along with this program. If not, see . # As a special exception to the GNU General Public License, if you # distribute this file as part of a program that contains a # configuration script generated by Autoconf, you may include it under # the same distribution terms that you use for the rest of that program. # Originally written by Alexandre Oliva . case $1 in '') echo "$0: No command. Try '$0 --help' for more information." 1>&2 exit 1; ;; -h | --h*) cat <<\EOF Usage: depcomp [--help] [--version] PROGRAM [ARGS] Run PROGRAMS ARGS to compile a file, generating dependencies as side-effects. Environment variables: depmode Dependency tracking mode. source Source file read by 'PROGRAMS ARGS'. object Object file output by 'PROGRAMS ARGS'. DEPDIR directory where to store dependencies. depfile Dependency file to output. tmpdepfile Temporary file to use when outputting dependencies. libtool Whether libtool is used (yes/no). Report bugs to . EOF exit $? ;; -v | --v*) echo "depcomp $scriptversion" exit $? ;; esac # Get the directory component of the given path, and save it in the # global variables '$dir'. Note that this directory component will # be either empty or ending with a '/' character. This is deliberate. set_dir_from () { case $1 in */*) dir=`echo "$1" | sed -e 's|/[^/]*$|/|'`;; *) dir=;; esac } # Get the suffix-stripped basename of the given path, and save it the # global variable '$base'. set_base_from () { base=`echo "$1" | sed -e 's|^.*/||' -e 's/\.[^.]*$//'` } # If no dependency file was actually created by the compiler invocation, # we still have to create a dummy depfile, to avoid errors with the # Makefile "include basename.Plo" scheme. make_dummy_depfile () { echo "#dummy" > "$depfile" } # Factor out some common post-processing of the generated depfile. # Requires the auxiliary global variable '$tmpdepfile' to be set. aix_post_process_depfile () { # If the compiler actually managed to produce a dependency file, # post-process it. if test -f "$tmpdepfile"; then # Each line is of the form 'foo.o: dependency.h'. # Do two passes, one to just change these to # $object: dependency.h # and one to simply output # dependency.h: # which is needed to avoid the deleted-header problem. { sed -e "s,^.*\.[$lower]*:,$object:," < "$tmpdepfile" sed -e "s,^.*\.[$lower]*:[$tab ]*,," -e 's,$,:,' < "$tmpdepfile" } > "$depfile" rm -f "$tmpdepfile" else make_dummy_depfile fi } # A tabulation character. tab=' ' # A newline character. nl=' ' # Character ranges might be problematic outside the C locale. # These definitions help. upper=ABCDEFGHIJKLMNOPQRSTUVWXYZ lower=abcdefghijklmnopqrstuvwxyz digits=0123456789 alpha=${upper}${lower} if test -z "$depmode" || test -z "$source" || test -z "$object"; then echo "depcomp: Variables source, object and depmode must be set" 1>&2 exit 1 fi # Dependencies for sub/bar.o or sub/bar.obj go into sub/.deps/bar.Po. depfile=${depfile-`echo "$object" | sed 's|[^\\/]*$|'${DEPDIR-.deps}'/&|;s|\.\([^.]*\)$|.P\1|;s|Pobj$|Po|'`} tmpdepfile=${tmpdepfile-`echo "$depfile" | sed 's/\.\([^.]*\)$/.T\1/'`} rm -f "$tmpdepfile" # Avoid interferences from the environment. gccflag= dashmflag= # Some modes work just like other modes, but use different flags. We # parameterize here, but still list the modes in the big case below, # to make depend.m4 easier to write. Note that we *cannot* use a case # here, because this file can only contain one case statement. if test "$depmode" = hp; then # HP compiler uses -M and no extra arg. gccflag=-M depmode=gcc fi if test "$depmode" = dashXmstdout; then # This is just like dashmstdout with a different argument. dashmflag=-xM depmode=dashmstdout fi cygpath_u="cygpath -u -f -" if test "$depmode" = msvcmsys; then # This is just like msvisualcpp but w/o cygpath translation. # Just convert the backslash-escaped backslashes to single forward # slashes to satisfy depend.m4 cygpath_u='sed s,\\\\,/,g' depmode=msvisualcpp fi if test "$depmode" = msvc7msys; then # This is just like msvc7 but w/o cygpath translation. # Just convert the backslash-escaped backslashes to single forward # slashes to satisfy depend.m4 cygpath_u='sed s,\\\\,/,g' depmode=msvc7 fi if test "$depmode" = xlc; then # IBM C/C++ Compilers xlc/xlC can output gcc-like dependency information. gccflag=-qmakedep=gcc,-MF depmode=gcc fi case "$depmode" in gcc3) ## gcc 3 implements dependency tracking that does exactly what ## we want. Yay! Note: for some reason libtool 1.4 doesn't like ## it if -MD -MP comes after the -MF stuff. Hmm. ## Unfortunately, FreeBSD c89 acceptance of flags depends upon ## the command line argument order; so add the flags where they ## appear in depend2.am. Note that the slowdown incurred here ## affects only configure: in makefiles, %FASTDEP% shortcuts this. for arg do case $arg in -c) set fnord "$@" -MT "$object" -MD -MP -MF "$tmpdepfile" "$arg" ;; *) set fnord "$@" "$arg" ;; esac shift # fnord shift # $arg done "$@" stat=$? if test $stat -ne 0; then rm -f "$tmpdepfile" exit $stat fi mv "$tmpdepfile" "$depfile" ;; gcc) ## Note that this doesn't just cater to obsosete pre-3.x GCC compilers. ## but also to in-use compilers like IMB xlc/xlC and the HP C compiler. ## (see the conditional assignment to $gccflag above). ## There are various ways to get dependency output from gcc. Here's ## why we pick this rather obscure method: ## - Don't want to use -MD because we'd like the dependencies to end ## up in a subdir. Having to rename by hand is ugly. ## (We might end up doing this anyway to support other compilers.) ## - The DEPENDENCIES_OUTPUT environment variable makes gcc act like ## -MM, not -M (despite what the docs say). Also, it might not be ## supported by the other compilers which use the 'gcc' depmode. ## - Using -M directly means running the compiler twice (even worse ## than renaming). if test -z "$gccflag"; then gccflag=-MD, fi "$@" -Wp,"$gccflag$tmpdepfile" stat=$? if test $stat -ne 0; then rm -f "$tmpdepfile" exit $stat fi rm -f "$depfile" echo "$object : \\" > "$depfile" # The second -e expression handles DOS-style file names with drive # letters. sed -e 's/^[^:]*: / /' \ -e 's/^['$alpha']:\/[^:]*: / /' < "$tmpdepfile" >> "$depfile" ## This next piece of magic avoids the "deleted header file" problem. ## The problem is that when a header file which appears in a .P file ## is deleted, the dependency causes make to die (because there is ## typically no way to rebuild the header). We avoid this by adding ## dummy dependencies for each header file. Too bad gcc doesn't do ## this for us directly. ## Some versions of gcc put a space before the ':'. On the theory ## that the space means something, we add a space to the output as ## well. hp depmode also adds that space, but also prefixes the VPATH ## to the object. Take care to not repeat it in the output. ## Some versions of the HPUX 10.20 sed can't process this invocation ## correctly. Breaking it into two sed invocations is a workaround. tr ' ' "$nl" < "$tmpdepfile" \ | sed -e 's/^\\$//' -e '/^$/d' -e "s|.*$object$||" -e '/:$/d' \ | sed -e 's/$/ :/' >> "$depfile" rm -f "$tmpdepfile" ;; hp) # This case exists only to let depend.m4 do its work. It works by # looking at the text of this script. This case will never be run, # since it is checked for above. exit 1 ;; sgi) if test "$libtool" = yes; then "$@" "-Wp,-MDupdate,$tmpdepfile" else "$@" -MDupdate "$tmpdepfile" fi stat=$? if test $stat -ne 0; then rm -f "$tmpdepfile" exit $stat fi rm -f "$depfile" if test -f "$tmpdepfile"; then # yes, the sourcefile depend on other files echo "$object : \\" > "$depfile" # Clip off the initial element (the dependent). Don't try to be # clever and replace this with sed code, as IRIX sed won't handle # lines with more than a fixed number of characters (4096 in # IRIX 6.2 sed, 8192 in IRIX 6.5). We also remove comment lines; # the IRIX cc adds comments like '#:fec' to the end of the # dependency line. tr ' ' "$nl" < "$tmpdepfile" \ | sed -e 's/^.*\.o://' -e 's/#.*$//' -e '/^$/ d' \ | tr "$nl" ' ' >> "$depfile" echo >> "$depfile" # The second pass generates a dummy entry for each header file. tr ' ' "$nl" < "$tmpdepfile" \ | sed -e 's/^.*\.o://' -e 's/#.*$//' -e '/^$/ d' -e 's/$/:/' \ >> "$depfile" else make_dummy_depfile fi rm -f "$tmpdepfile" ;; xlc) # This case exists only to let depend.m4 do its work. It works by # looking at the text of this script. This case will never be run, # since it is checked for above. exit 1 ;; aix) # The C for AIX Compiler uses -M and outputs the dependencies # in a .u file. In older versions, this file always lives in the # current directory. Also, the AIX compiler puts '$object:' at the # start of each line; $object doesn't have directory information. # Version 6 uses the directory in both cases. set_dir_from "$object" set_base_from "$object" if test "$libtool" = yes; then tmpdepfile1=$dir$base.u tmpdepfile2=$base.u tmpdepfile3=$dir.libs/$base.u "$@" -Wc,-M else tmpdepfile1=$dir$base.u tmpdepfile2=$dir$base.u tmpdepfile3=$dir$base.u "$@" -M fi stat=$? if test $stat -ne 0; then rm -f "$tmpdepfile1" "$tmpdepfile2" "$tmpdepfile3" exit $stat fi for tmpdepfile in "$tmpdepfile1" "$tmpdepfile2" "$tmpdepfile3" do test -f "$tmpdepfile" && break done aix_post_process_depfile ;; tcc) # tcc (Tiny C Compiler) understand '-MD -MF file' since version 0.9.26 # FIXME: That version still under development at the moment of writing. # Make that this statement remains true also for stable, released # versions. # It will wrap lines (doesn't matter whether long or short) with a # trailing '\', as in: # # foo.o : \ # foo.c \ # foo.h \ # # It will put a trailing '\' even on the last line, and will use leading # spaces rather than leading tabs (at least since its commit 0394caf7 # "Emit spaces for -MD"). "$@" -MD -MF "$tmpdepfile" stat=$? if test $stat -ne 0; then rm -f "$tmpdepfile" exit $stat fi rm -f "$depfile" # Each non-empty line is of the form 'foo.o : \' or ' dep.h \'. # We have to change lines of the first kind to '$object: \'. sed -e "s|.*:|$object :|" < "$tmpdepfile" > "$depfile" # And for each line of the second kind, we have to emit a 'dep.h:' # dummy dependency, to avoid the deleted-header problem. sed -n -e 's|^ *\(.*\) *\\$|\1:|p' < "$tmpdepfile" >> "$depfile" rm -f "$tmpdepfile" ;; ## The order of this option in the case statement is important, since the ## shell code in configure will try each of these formats in the order ## listed in this file. A plain '-MD' option would be understood by many ## compilers, so we must ensure this comes after the gcc and icc options. pgcc) # Portland's C compiler understands '-MD'. # Will always output deps to 'file.d' where file is the root name of the # source file under compilation, even if file resides in a subdirectory. # The object file name does not affect the name of the '.d' file. # pgcc 10.2 will output # foo.o: sub/foo.c sub/foo.h # and will wrap long lines using '\' : # foo.o: sub/foo.c ... \ # sub/foo.h ... \ # ... set_dir_from "$object" # Use the source, not the object, to determine the base name, since # that's sadly what pgcc will do too. set_base_from "$source" tmpdepfile=$base.d # For projects that build the same source file twice into different object # files, the pgcc approach of using the *source* file root name can cause # problems in parallel builds. Use a locking strategy to avoid stomping on # the same $tmpdepfile. lockdir=$base.d-lock trap " echo '$0: caught signal, cleaning up...' >&2 rmdir '$lockdir' exit 1 " 1 2 13 15 numtries=100 i=$numtries while test $i -gt 0; do # mkdir is a portable test-and-set. if mkdir "$lockdir" 2>/dev/null; then # This process acquired the lock. "$@" -MD stat=$? # Release the lock. rmdir "$lockdir" break else # If the lock is being held by a different process, wait # until the winning process is done or we timeout. while test -d "$lockdir" && test $i -gt 0; do sleep 1 i=`expr $i - 1` done fi i=`expr $i - 1` done trap - 1 2 13 15 if test $i -le 0; then echo "$0: failed to acquire lock after $numtries attempts" >&2 echo "$0: check lockdir '$lockdir'" >&2 exit 1 fi if test $stat -ne 0; then rm -f "$tmpdepfile" exit $stat fi rm -f "$depfile" # Each line is of the form `foo.o: dependent.h', # or `foo.o: dep1.h dep2.h \', or ` dep3.h dep4.h \'. # Do two passes, one to just change these to # `$object: dependent.h' and one to simply `dependent.h:'. sed "s,^[^:]*:,$object :," < "$tmpdepfile" > "$depfile" # Some versions of the HPUX 10.20 sed can't process this invocation # correctly. Breaking it into two sed invocations is a workaround. sed 's,^[^:]*: \(.*\)$,\1,;s/^\\$//;/^$/d;/:$/d' < "$tmpdepfile" \ | sed -e 's/$/ :/' >> "$depfile" rm -f "$tmpdepfile" ;; hp2) # The "hp" stanza above does not work with aCC (C++) and HP's ia64 # compilers, which have integrated preprocessors. The correct option # to use with these is +Maked; it writes dependencies to a file named # 'foo.d', which lands next to the object file, wherever that # happens to be. # Much of this is similar to the tru64 case; see comments there. set_dir_from "$object" set_base_from "$object" if test "$libtool" = yes; then tmpdepfile1=$dir$base.d tmpdepfile2=$dir.libs/$base.d "$@" -Wc,+Maked else tmpdepfile1=$dir$base.d tmpdepfile2=$dir$base.d "$@" +Maked fi stat=$? if test $stat -ne 0; then rm -f "$tmpdepfile1" "$tmpdepfile2" exit $stat fi for tmpdepfile in "$tmpdepfile1" "$tmpdepfile2" do test -f "$tmpdepfile" && break done if test -f "$tmpdepfile"; then sed -e "s,^.*\.[$lower]*:,$object:," "$tmpdepfile" > "$depfile" # Add 'dependent.h:' lines. sed -ne '2,${ s/^ *// s/ \\*$// s/$/:/ p }' "$tmpdepfile" >> "$depfile" else make_dummy_depfile fi rm -f "$tmpdepfile" "$tmpdepfile2" ;; tru64) # The Tru64 compiler uses -MD to generate dependencies as a side # effect. 'cc -MD -o foo.o ...' puts the dependencies into 'foo.o.d'. # At least on Alpha/Redhat 6.1, Compaq CCC V6.2-504 seems to put # dependencies in 'foo.d' instead, so we check for that too. # Subdirectories are respected. set_dir_from "$object" set_base_from "$object" if test "$libtool" = yes; then # Libtool generates 2 separate objects for the 2 libraries. These # two compilations output dependencies in $dir.libs/$base.o.d and # in $dir$base.o.d. We have to check for both files, because # one of the two compilations can be disabled. We should prefer # $dir$base.o.d over $dir.libs/$base.o.d because the latter is # automatically cleaned when .libs/ is deleted, while ignoring # the former would cause a distcleancheck panic. tmpdepfile1=$dir$base.o.d # libtool 1.5 tmpdepfile2=$dir.libs/$base.o.d # Likewise. tmpdepfile3=$dir.libs/$base.d # Compaq CCC V6.2-504 "$@" -Wc,-MD else tmpdepfile1=$dir$base.d tmpdepfile2=$dir$base.d tmpdepfile3=$dir$base.d "$@" -MD fi stat=$? if test $stat -ne 0; then rm -f "$tmpdepfile1" "$tmpdepfile2" "$tmpdepfile3" exit $stat fi for tmpdepfile in "$tmpdepfile1" "$tmpdepfile2" "$tmpdepfile3" do test -f "$tmpdepfile" && break done # Same post-processing that is required for AIX mode. aix_post_process_depfile ;; msvc7) if test "$libtool" = yes; then showIncludes=-Wc,-showIncludes else showIncludes=-showIncludes fi "$@" $showIncludes > "$tmpdepfile" stat=$? grep -v '^Note: including file: ' "$tmpdepfile" if test $stat -ne 0; then rm -f "$tmpdepfile" exit $stat fi rm -f "$depfile" echo "$object : \\" > "$depfile" # The first sed program below extracts the file names and escapes # backslashes for cygpath. The second sed program outputs the file # name when reading, but also accumulates all include files in the # hold buffer in order to output them again at the end. This only # works with sed implementations that can handle large buffers. sed < "$tmpdepfile" -n ' /^Note: including file: *\(.*\)/ { s//\1/ s/\\/\\\\/g p }' | $cygpath_u | sort -u | sed -n ' s/ /\\ /g s/\(.*\)/'"$tab"'\1 \\/p s/.\(.*\) \\/\1:/ H $ { s/.*/'"$tab"'/ G p }' >> "$depfile" echo >> "$depfile" # make sure the fragment doesn't end with a backslash rm -f "$tmpdepfile" ;; msvc7msys) # This case exists only to let depend.m4 do its work. It works by # looking at the text of this script. This case will never be run, # since it is checked for above. exit 1 ;; #nosideeffect) # This comment above is used by automake to tell side-effect # dependency tracking mechanisms from slower ones. dashmstdout) # Important note: in order to support this mode, a compiler *must* # always write the preprocessed file to stdout, regardless of -o. "$@" || exit $? # Remove the call to Libtool. if test "$libtool" = yes; then while test "X$1" != 'X--mode=compile'; do shift done shift fi # Remove '-o $object'. IFS=" " for arg do case $arg in -o) shift ;; $object) shift ;; *) set fnord "$@" "$arg" shift # fnord shift # $arg ;; esac done test -z "$dashmflag" && dashmflag=-M # Require at least two characters before searching for ':' # in the target name. This is to cope with DOS-style filenames: # a dependency such as 'c:/foo/bar' could be seen as target 'c' otherwise. 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This case will never be run, # since it is checked for above. exit 1 ;; none) exec "$@" ;; *) echo "Unknown depmode $depmode" 1>&2 exit 1 ;; esac exit 0 # Local Variables: # mode: shell-script # sh-indentation: 2 # eval: (add-hook 'write-file-hooks 'time-stamp) # time-stamp-start: "scriptversion=" # time-stamp-format: "%:y-%02m-%02d.%02H" # time-stamp-time-zone: "UTC" # time-stamp-end: "; # UTC" # End: mpgrafic-0.3.15/gdl/000077500000000000000000000000001314565475200141525ustar00rootroot00000000000000mpgrafic-0.3.15/gdl/powerspec.pro000066400000000000000000000044401314565475200167050ustar00rootroot00000000000000;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; ; Copyright (C) 2008-2016 by Simon Prunet ; ; prunet iap.fr ; ; ; ; This program is free software; you can redistribute it and/or modify ; ; it under the terms of the GNU General Public License as published by ; ; the Free Software Foundation; either version 2 of the License, or ; ; (at your option) any later version. ; ; ; ; This program is distributed in the hope that it will be useful, ; ; but WITHOUT ANY WARRANTY; without even the implied warranty of ; ; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ; ; GNU General Public License for more details. ; ; ; ; You should have received a copy of the GNU General Public License ; ; along with this program; if not, write to the ; ; Free Software Foundation, Inc., ; ; 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ; ; or see https://www.gnu.org/licenses/licenses.html#GPL . ; ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; pro powerspec, filename, k, pk read_grafic,filename,nn,cosmo,cube fcube = fft(cube,-1) fcube = double(fcube*conj(fcube)) dx=cosmo(0) n=nn(0) dk=2.0*!pi/(n*dx) h0=cosmo(7) a=findgen(n/2) kvec=[findgen(n/2+1),-reverse(a(1:*))]*dk kx=fltarr(n,n,n) ky=kx kz=kx for i=0,n-1 do begin for j=0,n-1 do begin kx(*,i,j) = kvec endfor endfor for i=0,n-1 do begin for j=0,n-1 do begin ky(i,*,j) = kvec endfor endfor for i=0,n-1 do begin for j=1,n-1 do begin kz(i,j,*) = kvec endfor endfor k = dblarr(n/2) pk = dblarr(n/2) modk = sqrt(kx^2+ky^2+kz^2) for i=0,n/2-1 do begin ou = where(modk ge double(i)*dk and modk lt double(i+1)*dk) pk(i) = total(fcube(ou),/double)/n_elements(ou)*(h0/100.)^3 k(i) = total(modk(ou),/double)/n_elements(ou)/(h0/100.) endfor end mpgrafic-0.3.15/gdl/read_grafic.pro000066400000000000000000000040021314565475200171160ustar00rootroot00000000000000;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; ; Copyright (C) 2008-2016 by Simon Prunet ; ; prunet iap.fr ; ; ; ; This program is free software; you can redistribute it and/or modify ; ; it under the terms of the GNU General Public License as published by ; ; the Free Software Foundation; either version 2 of the License, or ; ; (at your option) any later version. ; ; ; ; This program is distributed in the hope that it will be useful, ; ; but WITHOUT ANY WARRANTY; without even the implied warranty of ; ; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ; ; GNU General Public License for more details. ; ; ; ; You should have received a copy of the GNU General Public License ; ; along with this program; if not, write to the ; ; Free Software Foundation, Inc., ; ; 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ; ; or see https://www.gnu.org/licenses/licenses.html#GPL . ; ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; pro read_grafic, filename, nn, cosmo, cube, kfile=kfile if (n_params() ne 4) then begin print, 'Usage: read_grafic, filename, nn, cosmo, cube' return endif openr,1,filename,/f77 nn=lonarr(3) cosmo=fltarr(8) readu,1,nn,cosmo if (keyword_set(kfile)) then begin n20 = 2*(nn(0)/2+1) tempo = fltarr(n20,nn(1)) cube= fltarr(n20,nn(1),nn(2)) endif else begin tempo = fltarr(nn(0),nn(1)) cube = fltarr(nn(0),nn(1),nn(2)) endelse for i=0,nn(2)-1 do begin readu,1,tempo cube(*,*,i) = tempo endfor close,1 end mpgrafic-0.3.15/gdl/read_white.pro000066400000000000000000000033301314565475200170060ustar00rootroot00000000000000;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; ; Copyright (C) 2008-2016 by Simon Prunet ; ; prunet iap.fr ; ; ; ; This program is free software; you can redistribute it and/or modify ; ; it under the terms of the GNU General Public License as published by ; ; the Free Software Foundation; either version 2 of the License, or ; ; (at your option) any later version. ; ; ; ; This program is distributed in the hope that it will be useful, ; ; but WITHOUT ANY WARRANTY; without even the implied warranty of ; ; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ; ; GNU General Public License for more details. ; ; ; ; You should have received a copy of the GNU General Public License ; ; along with this program; if not, write to the ; ; Free Software Foundation, Inc., ; ; 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ; ; or see https://www.gnu.org/licenses/licenses.html#GPL . ; ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; pro read_white,filename,head,cube openr,1,filename,/f77 head=lonarr(4) readu,1,head nx=head(0) ny=head(1) nz=head(2) a=fltarr(nx,ny) cube=fltarr(nx,ny,nz) for i=0,nz-1 do begin readu,1,a cube(*,*,i)=a endfor close,1 end mpgrafic-0.3.15/gdl/write_grafic.pro000066400000000000000000000032731314565475200173460ustar00rootroot00000000000000;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; ; Copyright (C) 2008-2016 by Simon Prunet ; ; prunet iap.fr ; ; ; ; This program is free software; you can redistribute it and/or modify ; ; it under the terms of the GNU General Public License as published by ; ; the Free Software Foundation; either version 2 of the License, or ; ; (at your option) any later version. ; ; ; ; This program is distributed in the hope that it will be useful, ; ; but WITHOUT ANY WARRANTY; without even the implied warranty of ; ; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ; ; GNU General Public License for more details. ; ; ; ; You should have received a copy of the GNU General Public License ; ; along with this program; if not, write to the ; ; Free Software Foundation, Inc., ; ; 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ; ; or see https://www.gnu.org/licenses/licenses.html#GPL . ; ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; pro write_grafic, filename, nn, cosmo, cube openw,1,filename,/f77 writeu,1,nn,cosmo tempo=fltarr(nn(0),nn(1)) for i=0,nn(2)-1 do begin tempo = cube(*,*,i) writeu,1,tempo endfor close,1 end mpgrafic-0.3.15/idl000077700000000000000000000000001314565475200145632gdlustar00rootroot00000000000000mpgrafic-0.3.15/install-sh000077500000000000000000000341371314565475200154200ustar00rootroot00000000000000#!/bin/sh # install - install a program, script, or datafile scriptversion=2011-11-20.07; # UTC # This originates from X11R5 (mit/util/scripts/install.sh), which was # later released in X11R6 (xc/config/util/install.sh) with the # following copyright and license. # # Copyright (C) 1994 X Consortium # # Permission is hereby granted, free of charge, to any person obtaining a copy # of this software and associated documentation files (the "Software"), to # deal in the Software without restriction, including without limitation the # rights to use, copy, modify, merge, publish, distribute, sublicense, and/or # sell copies of the Software, and to permit persons to whom the Software is # furnished to do so, subject to the following conditions: # # The above copyright notice and this permission notice shall be included in # all copies or substantial portions of the Software. # # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR # IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, # FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE # X CONSORTIUM BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN # AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNEC- # TION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. # # Except as contained in this notice, the name of the X Consortium shall not # be used in advertising or otherwise to promote the sale, use or other deal- # ings in this Software without prior written authorization from the X Consor- # tium. # # # FSF changes to this file are in the public domain. # # Calling this script install-sh is preferred over install.sh, to prevent # 'make' implicit rules from creating a file called install from it # when there is no Makefile. # # This script is compatible with the BSD install script, but was written # from scratch. nl=' ' IFS=" "" $nl" # set DOITPROG to echo to test this script # Don't use :- since 4.3BSD and earlier shells don't like it. doit=${DOITPROG-} if test -z "$doit"; then doit_exec=exec else doit_exec=$doit fi # Put in absolute file names if you don't have them in your path; # or use environment vars. chgrpprog=${CHGRPPROG-chgrp} chmodprog=${CHMODPROG-chmod} chownprog=${CHOWNPROG-chown} cmpprog=${CMPPROG-cmp} cpprog=${CPPROG-cp} mkdirprog=${MKDIRPROG-mkdir} mvprog=${MVPROG-mv} rmprog=${RMPROG-rm} stripprog=${STRIPPROG-strip} posix_glob='?' initialize_posix_glob=' test "$posix_glob" != "?" || { if (set -f) 2>/dev/null; then posix_glob= else posix_glob=: fi } ' posix_mkdir= # Desired mode of installed file. mode=0755 chgrpcmd= chmodcmd=$chmodprog chowncmd= mvcmd=$mvprog rmcmd="$rmprog -f" stripcmd= src= dst= dir_arg= dst_arg= copy_on_change=false no_target_directory= usage="\ Usage: $0 [OPTION]... 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See the * # * GNU General Public License for more details. * # * * # * You should have received a copy of the GNU General Public License * # * along with this program; if not, write to the * # * Free Software Foundation, Inc., * # * 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA * # * or see https://www.gnu.org/licenses/licenses.html#GPL . * # **************************************************************************/ printf "Code regression test: does the standard input file generate an\n" printf "output file identical to that produced by version 0.3.4\n" printf "of mpgrafic? IEEE_UNDERFLOW_FLAG and IEEE_DENORMAL exceptions\n" printf "are considered acceptable and ignored. Other minor warnings are\n" printf "ignored too on some systems/implementations.\n\n" ## Run mpgrafic for a tiny number of particles with mpi - the aim is to test ## algorithms and arithmetic, not computer power. EXPECTED_OUTPUT=${srcdir}/Output.stdout.np32 TMP_OUT=Output.stdout.np32.tmp TMP_OUT_CLEANED=Output.stdout.np32.tmp.2 ## Running openmpi (on Debian) in a chroot jail with a minimal system ## installed will fail if ssh (and rsh, which is not encrypted) are ## absent from the system. Since ssh is not needed for testing on a ## single processor, the default "rsh_agent" can be safely overridden ## by the default shell "sh", but only if the mpirun (e.g. a symbolic link ## to orterun) options follow a known syntax. ## ## If the system is Debian with mpi-default-dev installed, then ## the check can be done as below. ## ## Adding a build dependency on ssh would be unreasonable, since, for ## example, mpi jobs can be run on multi-processor single ## machines. Moreover, it would add an extra burden in terms of ## automatic checking of packages for security issues. ## ## Please add cases for other mpi implementations or GNU/Linux ## distribution systems, or propose a more generic solution. ## if [ -r /usr/share/mpi-default-dev/debian_defaults ] ; then MPI_IMPL=$(grep ARCH_DEFAULT_MPI_IMPL \ /usr/share/mpi-default-dev/debian_defaults | \ sed -e 's/ARCH_DEFAULT_MPI_IMPL *= *//' | \ tail -n 1) # last evaluation overrides if [ "x${MPI_IMPL}" = "xopenmpi" ]; then printf "This looks like a debian openmpi system.\n" mpirun -n 1 --mca plm_rsh_agent sh --mca orte_rsh_agent sh \ ${srcdir}/src/mpgrafic --np=32 < ${srcdir}/Input.stdin \ > ${TMP_OUT} else printf "This looks like a debian system, but \n" printf "options for ${MPI_IMPL} have not yet been implemented,\n" printf "so this test will pass without doing any work.\n" exit 0 fi else printf "MPI implementation unknown.\n" mpirun -n 1 ${srcdir}/src/mpgrafic --np=32 < ${srcdir}/Input.stdin > ${TMP_OUT} fi ## Ignore known warnings from non-openmpi implementations of mpi: cat ${TMP_OUT} | \ grep -v "Warning: Cannot receive number of cores .*Round robin.*startup scheme will be involved" > \ ${TMP_OUT_CLEANED} LINES_DIFF=$(diff ${EXPECTED_OUTPUT} ${TMP_OUT_CLEANED} | wc -l) if [ "x${LINES_DIFF}" = "x0" ] ; then printf "A 32^3 mpi run of mpgrafic matched the expected output.\n" else printf "Warning: A 32^3 mpi run of mpgrafic did not match the expected output.\n" exit 1 fi #rm -f ${TMP_OUT} exit 0 mpgrafic-0.3.15/regression-test-0.3.7.8.sh000077500000000000000000000106271314565475200177170ustar00rootroot00000000000000#!/bin/sh # regression-test-0.3.7.8.sh - check consistency of mpgrafic behaviour versus v0.3.7.8 #/*************************************************************************** # * Copyright (C) 2017 Boud Roukema * # * * # * This program is free software; you can redistribute it and/or modify * # * it under the terms of the GNU General Public License as published by * # * the Free Software Foundation; either version 2 of the License, or * # * (at your option) any later version. * # * * # * This program is distributed in the hope that it will be useful, * # * but WITHOUT ANY WARRANTY; without even the implied warranty of * # * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * # * GNU General Public License for more details. * # * * # * You should have received a copy of the GNU General Public License * # * along with this program; if not, write to the * # * Free Software Foundation, Inc., * # * 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA * # * or see https://www.gnu.org/licenses/licenses.html#GPL . * # **************************************************************************/ printf "Code regression test: does the standard input file generate an\n" printf "output file identical to that produced by version 0.3.7.8\n" printf "of mpgrafic? IEEE_UNDERFLOW_FLAG and IEEE_DENORMAL exceptions\n" printf "are considered acceptable and ignored. Other minor warnings are\n" printf "ignored too on some systems/implementations.\n\n" ## Run mpgrafic for a tiny number of particles with mpi - the aim is to test ## algorithms and arithmetic, not computer power. EXPECTED_OUTPUT=${srcdir}/Output.stdout.np32 TMP_OUT=Output.stdout.np32.tmp TMP_OUT_CLEANED=Output.stdout.np32.tmp.2 ## Running openmpi (on Debian) in a chroot jail with a minimal system ## installed will fail if ssh (and rsh, which is not encrypted) are ## absent from the system. Since ssh is not needed for testing on a ## single processor, the default "rsh_agent" can be safely overridden ## by the default shell "sh", but only if the mpirun (e.g. a symbolic link ## to orterun) options follow a known syntax. ## ## If the system is Debian with mpi-default-dev installed, then ## the check can be done as below. ## ## Adding a build dependency on ssh would be unreasonable, since, for ## example, mpi jobs can be run on multi-processor single ## machines. Moreover, it would add an extra burden in terms of ## automatic checking of packages for security issues. ## ## Please add cases for other mpi implementations or GNU/Linux ## distribution systems, or propose a more generic solution. ## if [ -r /usr/share/mpi-default-dev/debian_defaults ] ; then MPI_IMPL=$(grep ARCH_DEFAULT_MPI_IMPL \ /usr/share/mpi-default-dev/debian_defaults | \ sed -e 's/ARCH_DEFAULT_MPI_IMPL *= *//' | \ tail -n 1) # last evaluation overrides if [ "x${MPI_IMPL}" = "xopenmpi" ]; then printf "This looks like a debian openmpi system.\n" mpirun -n 1 --mca plm_rsh_agent sh \ ${srcdir}/src/mpgrafic --np=32 < ${srcdir}/Input.stdin \ > ${TMP_OUT} else printf "Warning: This looks like a debian system, but \n" printf "options for ${MPI_IMPL} have not yet been implemented,\n" printf "so this test will pass without doing any work.\n" exit 0 fi else printf "MPI implementation unknown.\n" mpirun -n 1 ${srcdir}/src/mpgrafic --np=32 < ${srcdir}/Input.stdin > ${TMP_OUT} fi ## Ignore known warnings from non-openmpi implementations of mpi: cat ${TMP_OUT} | \ grep -v "Warning: Cannot receive number of cores .*Round robin.*startup scheme will be involved" > \ ${TMP_OUT_CLEANED} LINES_DIFF=$(diff ${EXPECTED_OUTPUT} ${TMP_OUT_CLEANED} | wc -l) if [ "x${LINES_DIFF}" = "x0" ] ; then printf "A 32^3 mpi run of mpgrafic matched the expected output.\n" else printf "Warning: A 32^3 mpi run of mpgrafic did not match the expected output.\n" exit 1 fi #rm -f ${TMP_OUT} exit 0 mpgrafic-0.3.15/regression-test-0.3.7.9.sh000077500000000000000000000115201314565475200177110ustar00rootroot00000000000000#!/bin/sh # regression-test-0.3.7.9.sh - check consistency of mpgrafic behaviour versus v0.3.7.9 #/*************************************************************************** # * Copyright (C) 2017 Boud Roukema * # * * # * This program is free software; you can redistribute it and/or modify * # * it under the terms of the GNU General Public License as published by * # * the Free Software Foundation; either version 2 of the License, or * # * (at your option) any later version. * # * * # * This program is distributed in the hope that it will be useful, * # * but WITHOUT ANY WARRANTY; without even the implied warranty of * # * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * # * GNU General Public License for more details. * # * * # * You should have received a copy of the GNU General Public License * # * along with this program; if not, write to the * # * Free Software Foundation, Inc., * # * 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA * # * or see https://www.gnu.org/licenses/licenses.html#GPL . * # **************************************************************************/ printf "Code regression test: does the standard input file generate an\n" printf "output file identical to that produced by version 0.3.7.9\n" printf "of mpgrafic? IEEE_UNDERFLOW_FLAG and IEEE_DENORMAL exceptions\n" printf "are considered acceptable and ignored. Other minor warnings are\n" printf "ignored too on some systems/implementations.\n\n" ## Run mpgrafic for a tiny number of particles with mpi - the aim is to test ## algorithms and arithmetic, not computer power. EXPECTED_OUTPUT=${srcdir}/Output.stdout.np32 TMP_OUT=Output.stdout.np32.tmp TMP_OUT_CLEANED=Output.stdout.np32.tmp.2 ## Running openmpi (on Debian) in a chroot jail with a minimal system ## installed will fail if ssh (and rsh, which is not encrypted) are ## absent from the system. Since ssh is not needed for testing on a ## single processor, the default "rsh_agent" can be safely overridden ## by the default shell "sh", but only if the mpirun (e.g. a symbolic link ## to orterun) options follow a known syntax. ## ## If the system is Debian with mpi-default-dev installed, then ## the check can be done as below. ## ## Adding a build dependency on ssh would be unreasonable, since, for ## example, mpi jobs can be run on multi-processor single ## machines. Moreover, it would add an extra burden in terms of ## automatic checking of packages for security issues. ## ## Please add cases for other mpi implementations or GNU/Linux ## distribution systems, or propose a more generic solution. ## ## 2017-08-14: Switch --mca plm_rsh_agent ssh to ## --mca plm_rsh_agent /bin/false - see ## https://lists.debian.org/debian-science/2015/10/msg00032.html + ## http://www.open-mpi.de/faq/?category=rsh ## This may enable builds on kfreebsd-(amd64|i386) and does not ## reduce the power of the test: ssh is obviously ## *not* desirable in automated builds of mpgrafic, and is not tested. ## if [ -r /usr/share/mpi-default-dev/debian_defaults ] ; then MPI_IMPL=$(grep ARCH_DEFAULT_MPI_IMPL \ /usr/share/mpi-default-dev/debian_defaults | \ sed -e 's/ARCH_DEFAULT_MPI_IMPL *= *//' | \ tail -n 1) # last evaluation overrides if [ "x${MPI_IMPL}" = "xopenmpi" ]; then printf "This looks like a debian openmpi system.\n" mpirun -n 1 --mca plm_rsh_agent /bin/false \ ${MPI_ALLOW_RUN_AS_ROOT} \ ${srcdir}/src/mpgrafic --np=32 < ${srcdir}/Input.stdin \ > ${TMP_OUT} else printf "Warning: This looks like a debian system, but \n" printf "options for ${MPI_IMPL} have not yet been implemented,\n" printf "so this test will pass without doing any work.\n" exit 0 fi else printf "MPI implementation unknown.\n" mpirun -n 1 ${srcdir}/src/mpgrafic --np=32 < ${srcdir}/Input.stdin > ${TMP_OUT} fi ## Ignore known warnings from non-openmpi implementations of mpi: cat ${TMP_OUT} | \ grep -v "Warning: Cannot receive number of cores .*Round robin.*startup scheme will be involved" > \ ${TMP_OUT_CLEANED} LINES_DIFF=$(diff ${EXPECTED_OUTPUT} ${TMP_OUT_CLEANED} | wc -l) if [ "x${LINES_DIFF}" = "x0" ] ; then printf "A 32^3 mpi run of mpgrafic matched the expected output.\n" else printf "Warning: A 32^3 mpi run of mpgrafic did not match the expected output.\n" exit 1 fi #rm -f ${TMP_OUT} exit 0 mpgrafic-0.3.15/regression-test-0.3.7.sh000077500000000000000000000106101314565475200175410ustar00rootroot00000000000000#!/bin/sh # regression-test-0.3.7.sh - check consistency of mpgrafic behaviour versus v0.3.7 #/*************************************************************************** # * Copyright (C) 2017 Boud Roukema * # * * # * This program is free software; you can redistribute it and/or modify * # * it under the terms of the GNU General Public License as published by * # * the Free Software Foundation; either version 2 of the License, or * # * (at your option) any later version. * # * * # * This program is distributed in the hope that it will be useful, * # * but WITHOUT ANY WARRANTY; without even the implied warranty of * # * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * # * GNU General Public License for more details. * # * * # * You should have received a copy of the GNU General Public License * # * along with this program; if not, write to the * # * Free Software Foundation, Inc., * # * 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA * # * or see https://www.gnu.org/licenses/licenses.html#GPL . * # **************************************************************************/ printf "Code regression test: does the standard input file generate an\n" printf "output file identical to that produced by version 0.3.7\n" printf "of mpgrafic? IEEE_UNDERFLOW_FLAG and IEEE_DENORMAL exceptions\n" printf "are considered acceptable and ignored. Other minor warnings are\n" printf "ignored too on some systems/implementations.\n\n" ## Run mpgrafic for a tiny number of particles with mpi - the aim is to test ## algorithms and arithmetic, not computer power. EXPECTED_OUTPUT=${srcdir}/Output.stdout.np32 TMP_OUT=Output.stdout.np32.tmp TMP_OUT_CLEANED=Output.stdout.np32.tmp.2 ## Running openmpi (on Debian) in a chroot jail with a minimal system ## installed will fail if ssh (and rsh, which is not encrypted) are ## absent from the system. Since ssh is not needed for testing on a ## single processor, the default "rsh_agent" can be safely overridden ## by the default shell "sh", but only if the mpirun (e.g. a symbolic link ## to orterun) options follow a known syntax. ## ## If the system is Debian with mpi-default-dev installed, then ## the check can be done as below. ## ## Adding a build dependency on ssh would be unreasonable, since, for ## example, mpi jobs can be run on multi-processor single ## machines. Moreover, it would add an extra burden in terms of ## automatic checking of packages for security issues. ## ## Please add cases for other mpi implementations or GNU/Linux ## distribution systems, or propose a more generic solution. ## if [ -r /usr/share/mpi-default-dev/debian_defaults ] ; then MPI_IMPL=$(grep ARCH_DEFAULT_MPI_IMPL \ /usr/share/mpi-default-dev/debian_defaults | \ sed -e 's/ARCH_DEFAULT_MPI_IMPL *= *//' | \ tail -n 1) # last evaluation overrides if [ "x${MPI_IMPL}" = "xopenmpi" ]; then printf "This looks like a debian openmpi system.\n" mpirun -n 1 --mca plm_rsh_agent sh \ ${srcdir}/src/mpgrafic --np=32 < ${srcdir}/Input.stdin \ > ${TMP_OUT} else printf "This looks like a debian system, but \n" printf "options for ${MPI_IMPL} have not yet been implemented,\n" printf "so this test will pass without doing any work.\n" exit 0 fi else printf "MPI implementation unknown.\n" mpirun -n 1 ${srcdir}/src/mpgrafic --np=32 < ${srcdir}/Input.stdin > ${TMP_OUT} fi ## Ignore known warnings from non-openmpi implementations of mpi: cat ${TMP_OUT} | \ grep -v "Warning: Cannot receive number of cores .*Round robin.*startup scheme will be involved" > \ ${TMP_OUT_CLEANED} LINES_DIFF=$(diff ${EXPECTED_OUTPUT} ${TMP_OUT_CLEANED} | wc -l) if [ "x${LINES_DIFF}" = "x0" ] ; 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you can redistribute it and/or modify* * it under the terms of the GNU General Public License as published by* * the Free Software Foundation; either version 2 of the License, or * * (at your option) any later version. * * * * This program is distributed in the hope that it will be useful, * * but WITHOUT ANY WARRANTY; without even the implied warranty of * * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * * GNU General Public License for more details. * * * * You should have received a copy of the GNU General Public License * * along with this program; if not, write to the * * Free Software Foundation, Inc., * * 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA * * or see https://www.gnu.org/licenses/licenses.html#GPL . * *************************************************************************/ #include #include #ifdef __GNUC__ #include #include #endif #define N_SIGMA_GAUSS 1.0 /* Only turn on this check for small numbers; heavy I/O! */ /* #define CHECK_STREAM_INDEPENDENCE 1 */ void get_gsl_rng_seeds(int64_t iseed, int32_t MaxRandNumStreams, int64_t *seeds /* 1D array [MaxRandNumStreams] */ );/* get_gsl_rng_ran_seeds */ /* global random number generator - generate seeds, close generator */ void get_gsl_rng_seeds(int64_t iseed, int32_t MaxRandNumStreams, int64_t *seeds /* 1D array [MaxRandNumStreams] */ )/* get_gsl_rng_ran_seeds */ { const gsl_rng_type * T_gsl; gsl_rng * r_gsl; int32_t i_seeds; /* MT19937 - Makoto Matsumoto and Takuji Nishimura; Mersenne prime period of 2^19937 - 1; second revision 2002 - info gsl for details */ T_gsl = gsl_rng_mt19937; /* RANLUX algorithm of L\"uscher; period \sim 10^171; second generation algorithm; double-precision, highest luxury level; slow: about 7-10 times slower than MT19937; claims of well-tested randomness - info gsl for more */ /* T_gsl = gsl_rng_ranlxd2; */ /* Fortran does not include unsigned integers, so we store iseed and seeds[...] as signed 64-bit integers, but convert them back and forth when giving them to or getting them from gsl_rng. */ /* No conversion from int64_t should be needed as of 2017. */ gsl_rng_default_seed = (unsigned long) iseed; r_gsl = gsl_rng_alloc(T_gsl); for(i_seeds=0; i_seeds < MaxRandNumStreams; i_seeds++){ seeds[i_seeds] = (int64_t) gsl_rng_get(r_gsl); }; gsl_rng_free(r_gsl); } void gauss_gsl(int64_t Seed, double *RandNum, int free_gauss_gsl); /* Independent instances of this are created by independent mpi threads. */ void gauss_gsl(int64_t Seed, double *RandNum, int free_gauss_gsl){ /* The static attribute should work for mpi (independent memory per thread). If porting to openmp (shared memory) is needed, test this before trusting it. */ static int first_time = 1; static const gsl_rng_type * T_gsl; static gsl_rng * r_gsl = NULL; static const double n_sigma_gauss = N_SIGMA_GAUSS; if(free_gauss_gsl){ gsl_rng_free(r_gsl); first_time = 0; /* in case this function gets called again after freeing*/ }else{ if(first_time){ first_time = 0; /* no longer first time */ /* initialise the random number generator */ T_gsl = gsl_rng_ranlxd2; /* A faster option could be: T_gsl = gsl_rng_mt19937; See the GSL documentation for more generators. */ gsl_rng_default_seed = (unsigned long) Seed; r_gsl = gsl_rng_alloc(T_gsl); /* uses gsl_rng_default_seed */ }; /* generate double-precision gaussian random value https://en.wikipedia.org/wiki/Ziggurat_algorithm */ *RandNum = gsl_ran_gaussian_ziggurat(r_gsl, n_sigma_gauss); #ifdef CHECK_STREAM_INDEPENDENCE fflush(stdout); printf("Check: gauss_gsl: Seed= %ld, r_gsl= %p, *RandNum= %e\n", Seed, r_gsl, *RandNum); fflush(stdout); #endif }; } mpgrafic-0.3.15/src/grafic1.inc000066400000000000000000000024131314565475200162020ustar00rootroot00000000000000!c grafic1.inc !c User must set parameters then make grafic1 !c !c Parameters for offsetting baryon and CDM velocity fields by !c 0.5 grid spacing. !c The origin of the baryon density field is (0,0,0). The origin !c of the baryon velocity field will be offvelb*(0.5,0.5,0.5)*dx !c and similarly for offvelc. offvelb/c should be +/-1 or 0. integer offvelb,offvelc parameter (offvelb=0,offvelc=+1) !c !c Initial density fluctuation amplitude on the ultimate subgrid scale. !c For large grids (> 10^7) one may wish to decrease this; for small !c refinement grids (< 10^6) and multiple levels one may wish to increase it. real sigstart parameter (sigstart=0.2) !c !c Top grid mesh size. !c ! integer np1,np2,np3 !2016-12-27 shifted to optional command line argument in mpgrafic.f90 --boud !#ifdef MPGRAFIC_NP ! parameter (np1=MPGRAFIC_NP,np2=MPGRAFIC_NP,np3=MPGRAFIC_NP) !#else !c parameter (np1=128,np2=128,np3=128) ! parameter (np1=256,np2=256,np3=256) !c parameter (np1=512,np2=512,np3=512) !#endif !c !c np[1-3]: particle lattice size for computing initial conditions. !c All must be divisible by 2. They need not be equal. !c The memory required by grafic1 is np1*np2*np3 words plus a few. mpgrafic-0.3.15/src/grafic_io.f90000066400000000000000000000457531314565475200164530ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! Copyright (C) 2008-2017 by Simon Prunet, Christophe Pichon et al ! ! prunet iap.fr ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! #include "../config.h" module grafic_io use grafic_types implicit none ! integer, parameter :: nblock = 10 integer, parameter :: RECORD_FLAG=4 !bytes type taille integer :: nx integer :: ny integer :: nz real(kind=sp) :: dx real(kind=sp) :: lx real(kind=sp) :: ly real(kind=sp) :: lz end type taille type cosmo real(kind=sp) :: astart real(kind=sp) :: omegam real(kind=sp) :: omegav real(kind=sp) :: h0 end type cosmo interface grafic_write module procedure grafic_write_single, grafic_write_double end interface interface grafic_read module procedure grafic_read_single, grafic_read_double end interface ! TODO: When c_off_t becomes available and standard, use this ! together with AC_SYS_LARGEFILE in configure.ac to get 64-bit ! file offsets; change int64_t to off_t in parallel_io.c too. interface subroutine f77_parallel_read & (filename, fnamelen, size, offset, buffer_address) use iso_C_binding implicit none character(len=128) :: filename integer(c_int32_t) :: fnamelen integer(c_size_t) :: size ! size_t = unsigned long, cf pread(), pwrite() integer(c_int64_t) :: offset type(c_ptr), value :: buffer_address end subroutine f77_parallel_read end interface interface subroutine f77_parallel_write & (filename, fnamelen, size, offset, buffer_address) use iso_C_binding implicit none character(len=128) :: filename integer(c_int32_t) :: fnamelen integer(c_size_t) :: size integer(c_int64_t) :: offset type(c_ptr), value :: buffer_address end subroutine f77_parallel_write end interface contains ! This routine write a fftw_mpi slice of a cube ! This slice has interior dimension nx, exterior nz. ! Beware that interior dimension is padded: nx <- 2(nx/2+1) ! Padded region will not be written. subroutine grafic_write_double(buffer,local_nz,local_z_start,ny,nx,filename,padding_in, white_in) use iso_C_binding #ifdef HAVE_USE_MPI_F08 use mpi_f08 #endif ! Arguments implicit none #ifndef HAVE_USE_MPI_F08 include 'mpif.h' #endif real(dp), dimension(:), intent(in) :: buffer integer, intent(in) :: local_nz, local_z_start, ny, nx character(len=128), intent(in) :: filename !integer, intent(in) :: filenamelen logical, optional :: padding_in logical, optional :: white_in ! Local variables !real(sp), allocatable, dimension(:) :: tampon !integer :: record_size !integer(RECORD_FLAG) :: taille_tampon ! kind values are implementation dependent! real(c_float), allocatable, dimension(:), target :: tampon integer(c_int32_t), target :: taille_tampon integer :: n2x integer(i8b) :: index, index2, offset integer(c_size_t) length !, toto !integer :: idummy=0 integer :: i,j,k !,myid,ierr logical :: padding, white padding=.false. white=.false. if (present(padding_in)) padding = padding_in !if (present(padding_in)) write(*,*) 'padding is on' if (present(white_in)) white = white_in ! 2*4 for leading and trailing record sizes n2x = 2*(nx/2+1) if (padding) then !write(*,*) 'padding is true in grafic_write' allocate(tampon(ny*n2x)) taille_tampon = ny*n2x*sp_bytes ! in bytes else allocate(tampon(ny*nx)) taille_tampon = ny*nx*sp_bytes ! in bytes endif if (white) then offset = 4*4 + 2*RECORD_FLAG else offset = 3*4+8*sp_bytes + 2*RECORD_FLAG ! First record endif if (padding) then offset = offset + local_z_start*int(ny*n2x*sp_bytes + 2*RECORD_FLAG, i8b) else offset = offset + local_z_start*int(ny*nx*sp_bytes + 2*RECORD_FLAG, i8b) endif do k=1,local_nz index2=1 ! This loop to (eventually) get rid of fftw padding zone if (padding) then do j=1,ny do i=1,n2x index = ((k-1)*ny+j-1)*n2x+i tampon(index2) = real(buffer(index),kind=sp) index2 = index2 + 1 enddo enddo else do j=1,ny do i=1,nx index = ((k-1)*ny+j-1)*n2x+i tampon(index2) = real(buffer(index),kind=sp) index2 = index2 + 1 enddo enddo endif ! First write f... Fortran record length length=RECORD_FLAG call f77_parallel_write(trim(filename),len_trim(filename, i4b), length & & ,offset,c_loc(taille_tampon)) offset = offset+RECORD_FLAG if (padding) then length = ny*n2x*sp_bytes else length = ny*nx*sp_bytes endif call f77_parallel_write(trim(filename),len_trim(filename, i4b), length, & & offset, c_loc(tampon)) offset = offset+length ! Again .. length=RECORD_FLAG call f77_parallel_write(trim(filename),len_trim(filename, i4b), length & & ,offset,c_loc(taille_tampon)) offset = offset+RECORD_FLAG enddo deallocate(tampon) end subroutine grafic_write_double subroutine grafic_write_single(buffer,local_nz,local_z_start,ny,nx,filename,padding_in, white_in) use iso_C_binding #ifdef HAVE_USE_MPI_F08 use mpi_f08 #endif ! Arguments implicit none #ifndef HAVE_USE_MPI_F08 include 'mpif.h' #endif real(sp), dimension(:), intent(in) :: buffer integer, intent(in) :: local_nz, local_z_start, ny, nx character(len=128), intent(in) :: filename !integer, intent(in) :: filenamelen logical, optional :: padding_in logical, optional :: white_in ! Local variables !real(sp), allocatable, dimension(:) :: tampon !integer :: record_size !integer(RECORD_FLAG) :: taille_tampon real(c_float), allocatable, dimension(:), target :: tampon integer(c_int32_t), target :: taille_tampon integer :: n2x integer(i8b) :: index, index2, offset integer(c_size_t) :: length !, toto !integer :: idummy=0 integer :: i,j,k !,myid,ierr logical :: padding, white padding=.false. white=.false. if (present(padding_in)) padding = padding_in !if (present(padding_in)) write(*,*) 'padding is on' if (present(white_in)) white = white_in ! 2*4 for leading and trailing record sizes n2x = 2*(nx/2+1) if (padding) then !write(*,*) 'padding is true in grafic_write' allocate(tampon(ny*n2x)) taille_tampon = ny*n2x*sp_bytes ! in bytes else allocate(tampon(ny*nx)) taille_tampon = ny*nx*sp_bytes ! in bytes endif if (white) then offset = 4*4 + 2*RECORD_FLAG else offset = 3*4+8*sp_bytes + 2*RECORD_FLAG ! First record endif if (padding) then offset = offset + local_z_start*int(ny*n2x*sp_bytes + 2*RECORD_FLAG, i8b) else offset = offset + local_z_start*int(ny*nx*sp_bytes + 2*RECORD_FLAG, i8b) endif do k=1,local_nz index2=1 ! This loop to (eventually) get rid of fftw padding zone if (padding) then do j=1,ny do i=1,n2x index = ((k-1)*ny+j-1)*n2x+i tampon(index2) = real(buffer(index),kind=sp) index2 = index2 + 1 enddo enddo else do j=1,ny do i=1,nx index = ((k-1)*ny+j-1)*n2x+i tampon(index2) = real(buffer(index),kind=sp) index2 = index2 + 1 enddo enddo endif ! First write f... Fortran record length length=RECORD_FLAG call f77_parallel_write(trim(filename),len_trim(filename, i4b), length & & ,offset,c_loc(taille_tampon)) offset = offset+RECORD_FLAG if (padding) then length = ny*n2x*sp_bytes else length = ny*nx*sp_bytes endif call f77_parallel_write(trim(filename),len_trim(filename, i4b), length, & & offset, c_loc(tampon)) offset = offset+length ! Again .. length=RECORD_FLAG call f77_parallel_write(trim(filename),len_trim(filename, i4b), length & & ,offset,c_loc(taille_tampon)) offset = offset+RECORD_FLAG enddo deallocate(tampon) end subroutine grafic_write_single subroutine grafic_read_double(buffer,local_nz,local_z_start,ny,nx,filename, padding_in, white_in) use iso_C_binding #ifdef HAVE_USE_MPI_F08 use mpi_f08 #endif ! Arguments implicit none #ifndef HAVE_USE_MPI_F08 include 'mpif.h' #endif integer, intent(in) :: local_nz, local_z_start, ny, nx real(dp), dimension(local_nz*ny*2*(nx/2+1)), intent(out) :: buffer character(len=128), intent(in) :: filename logical, optional :: padding_in ! Read padded zone or not logical, optional :: white_in ! Different header for white noise file ! Local variables !real(sp), allocatable, dimension(:) :: tampon !integer :: record_size !integer(RECORD_FLAG) :: taille_tampon ! kind values are implementation dependent! real(c_float), allocatable, dimension(:), target :: tampon integer(c_int32_t), target :: taille_tampon integer :: n2x integer(i8b) :: index, index2, offset integer(c_size_t) :: length !integer :: idummy=0 integer :: i,j,k !integer :: myid,ierr logical :: padding logical :: white padding = .false. white = .false. if (present(padding_in)) padding = padding_in if (present(white_in)) white = white_in ! 2*4 for leading and trailing record sizes n2x = 2*(nx/2+1) if (padding) then allocate(tampon(ny*n2x)) else allocate(tampon(ny*nx)) endif taille_tampon = 0 if (white) then offset = 4*4 + 2*RECORD_FLAG else offset = 3*4+8*sp_bytes + 2*RECORD_FLAG ! First record endif if (padding) then offset = offset + local_z_start*int(ny*n2x*sp_bytes + 2*RECORD_FLAG, i8b) else offset = offset + local_z_start*int(ny*nx*sp_bytes+2*RECORD_FLAG, i8b) endif do k=1,local_nz length = RECORD_FLAG ! First read f... Fortran record length call f77_parallel_read(trim(filename),len_trim(filename, i4b), length & & ,offset,c_loc(taille_tampon)) if (padding) then if (taille_tampon /= ny*n2x*sp_bytes) then print*,'Record size ',taille_tampon,' is different from expected', & & ny*n2x*sp_bytes stop endif else if (taille_tampon /= ny*nx*sp_bytes) then print*,'Record size ',taille_tampon,' is different from expected', & & ny*nx*sp_bytes stop endif endif offset = offset+RECORD_FLAG if (padding) then length = ny*n2x*sp_bytes else length = ny*nx*sp_bytes endif call f77_parallel_read(trim(filename),len_trim(filename, i4b), length, & & offset, c_loc(tampon)) offset = offset+length ! Again .. length=RECORD_FLAG call f77_parallel_read(trim(filename),len_trim(filename, i4b), length & & ,offset,c_loc(taille_tampon)) offset = offset+RECORD_FLAG ! This loop to (eventually) get rid of fftw padding zone index2=1 if (padding) then do j=1,ny do i=1,n2x ! Read padding (Nyquist) : reading in k space ... index=((k-1)*ny+j-1)*n2x+i buffer(index) = real(tampon(index2),kind=dp) index2 = index2 + 1 enddo enddo else do j=1,ny do i=1,nx ! Do not read padding : reading in real space ... index = ((k-1)*ny+j-1)*n2x+i buffer(index) = real(tampon(index2),kind=dp) index2 = index2 + 1 enddo enddo endif enddo deallocate(tampon) end subroutine grafic_read_double subroutine grafic_read_single(buffer,local_nz,local_z_start,ny,nx,filename, padding_in, white_in) use iso_C_binding #ifdef HAVE_USE_MPI_F08 use mpi_f08 #endif ! Arguments implicit none #ifndef HAVE_USE_MPI_F08 include 'mpif.h' #endif integer, intent(in) :: local_nz, local_z_start, ny, nx real(sp), dimension(local_nz*ny*2*(nx/2+1)), intent(out) :: buffer character(len=128), intent(in) :: filename logical, optional :: padding_in ! Read padded zone or not logical, optional :: white_in ! Different header for white noise file ! Local variables !real(sp), allocatable, dimension(:) :: tampon !integer :: record_size !integer(RECORD_FLAG) :: taille_tampon real(c_float), allocatable, dimension(:), target :: tampon integer(c_int32_t), target :: taille_tampon integer :: n2x integer(i8b) :: index, index2, offset integer(c_size_t) :: length !integer :: idummy=0 integer :: i,j,k !integer :: myid,ierr logical :: padding logical :: white padding = .false. white = .false. if (present(padding_in)) padding = padding_in if (present(white_in)) white = white_in ! 2*4 for leading and trailing record sizes n2x = 2*(nx/2+1) if (padding) then allocate(tampon(ny*n2x)) else allocate(tampon(ny*nx)) endif taille_tampon = 0 if (white) then offset = 4*4 + 2*RECORD_FLAG else offset = 3*4+8*sp_bytes + 2*RECORD_FLAG ! First record endif if (padding) then offset = offset + local_z_start*int(ny*n2x*sp_bytes + 2*RECORD_FLAG, i8b) else offset = offset + local_z_start*int(ny*nx*sp_bytes+2*RECORD_FLAG, i8b) endif do k=1,local_nz length = RECORD_FLAG ! First read f... Fortran record length call f77_parallel_read(trim(filename),len_trim(filename, i4b), length & & ,offset,c_loc(taille_tampon)) if (padding) then if (taille_tampon /= ny*n2x*sp_bytes) then print*,'Record size ',taille_tampon,' is different from expected', & & ny*n2x*sp_bytes stop endif else if (taille_tampon /= ny*nx*sp_bytes) then print*,'Record size ',taille_tampon,' is different from expected', & & ny*nx*sp_bytes stop endif endif offset = offset+RECORD_FLAG if (padding) then length = ny*n2x*sp_bytes else length = ny*nx*sp_bytes endif call f77_parallel_read(trim(filename),len_trim(filename, i4b), length, & & offset, c_loc(tampon)) offset = offset+length ! Again .. length=RECORD_FLAG call f77_parallel_read(trim(filename),len_trim(filename, i4b), length & & ,offset,c_loc(taille_tampon)) offset = offset+RECORD_FLAG ! This loop to (eventually) get rid of fftw padding zone index2=1 if (padding) then do j=1,ny do i=1,n2x ! Read padding (Nyquist) : reading in k space ... index=((k-1)*ny+j-1)*n2x+i buffer(index) = real(tampon(index2),kind=sp) index2 = index2 + 1 enddo enddo else do j=1,ny do i=1,nx ! Do not read padding : reading in real space ... index = ((k-1)*ny+j-1)*n2x+i buffer(index) = real(tampon(index2),kind=sp) index2 = index2 + 1 enddo enddo endif enddo deallocate(tampon) end subroutine grafic_read_single subroutine grafic_read_header(filename,head_taille,head_cosmo) type(taille), intent(out) :: head_taille type(cosmo), intent(out) :: head_cosmo character(len=128), intent(in) :: filename logical :: ok inquire(file=filename,exist=ok) if (.not. ok) then print*,'File ',trim(filename),' does not exist, aborting.' stop endif open(2,file=filename,form='unformatted',status='old') read(2) head_taille%nx, head_taille%ny, head_taille%nz, head_taille%dx, & head_taille%lx, head_taille%ly, head_taille%lz, head_cosmo%astart, & head_cosmo%omegam, head_cosmo%omegav, head_cosmo%h0 close(2) end subroutine grafic_read_header subroutine grafic_read_header_white(filename,nx,ny,nz,iseed) use iso_C_binding integer, intent(out) :: nx,ny,nz #ifdef HAVE_LIBGSL integer(c_int64_t), intent(out) :: iseed #else integer, intent(out) :: iseed #endif character(len=128), intent(in) :: filename logical :: ok inquire(file=filename,exist=ok) if (.not. ok) then print*,'File ',trim(filename),' does not exist, aborting.' stop endif open(2,file=filename,form='unformatted',status='old') read(2) nx, ny, nz, iseed close(2) end subroutine grafic_read_header_white subroutine grafic_write_header(filename,head_taille,head_cosmo) type(taille), intent(in) :: head_taille type(cosmo), intent(in) :: head_cosmo character(len=128), intent(in) :: filename open(2,file=filename,form='unformatted',status='unknown') write(2) head_taille%nx, head_taille%ny, head_taille%nz, head_taille%dx, & head_taille%lx, head_taille%ly, head_taille%lz, head_cosmo%astart, & head_cosmo%omegam, head_cosmo%omegav, head_cosmo%h0 close(2) end subroutine grafic_write_header subroutine grafic_write_header_white(filename,nx,ny,nz,iseed) use iso_C_binding integer, intent(in) :: nx,ny,nz #ifdef HAVE_LIBGSL integer(c_int64_t), intent(in) :: iseed #else integer, intent(in) :: iseed #endif character(len=128), intent(in) :: filename open(2,file=filename,form='unformatted',status='unknown') write(2) nx, ny, nz, iseed close(2) end subroutine grafic_write_header_white end module grafic_io mpgrafic-0.3.15/src/grafic_types.f90000066400000000000000000000063051314565475200171760ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! Copyright (C) 2008-2017 by Simon Prunet, Christophe Pichon et al ! ! prunet iap.fr ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! module grafic_types #ifdef HAVE_USE_MPI_F08 use mpi_f08 #endif integer, parameter :: dp=selected_real_kind(12,200) integer, parameter :: sp=selected_real_kind(5,30) ! TODO: portability - "kind parameters are implementation dependent" - ! https://gcc.gnu.org/onlinedocs/gcc-6.3.0/gfortran/Old-style-kind-specifications.html ! possible solution - https://gcc.gnu.org/onlinedocs/gcc-6.3.0/gfortran/C_005fSIZEOF.html integer, parameter :: sp_bytes = 4 integer, parameter :: i4b=selected_int_kind(9) integer, parameter :: i8b=selected_int_kind(18) !log(2*10^18)/log(2)=60.8 integer, parameter :: dpc=kind((1.0_dp,1.0_dp)) REAL(kind=dp), PARAMETER, public :: PI=3.141592653589793238462643383279502884197_dp ! FFTW stuff INTEGER,PARAMETER:: FFTW_FORWARD=-1, FFTW_BACKWARD=1 INTEGER,PARAMETER:: FFTW_REAL_TO_COMPLEX=-1, FFTW_COMPLEX_TO_REAL=1 INTEGER,PARAMETER:: FFTW_ESTIMATE=0, FFTW_MEASURE=1 INTEGER,PARAMETER:: FFTW_OUT_OF_PLACE=0, FFTW_IN_PLACE=8 INTEGER,PARAMETER:: FFTW_USE_WISDOM=16 INTEGER,PARAMETER:: FFTW_THREADSAFE=128 integer,parameter:: FFTW_TRANSPOSED_ORDER=1, FFTW_NORMAL_ORDER=0 integer,parameter:: FFTW_SCRAMBLED_INPUT=8192 integer,parameter:: FFTW_SCRAMBLED_OUTPUT=16384 #ifdef ADD1US #define rfftw3d_f77_create_plan rfftw3d_f77_create_plan_ #define rfftwnd_f77_destroy_plan rfftwnd_f77_destroy_plan_ #define rfftwnd_f77_one_real_to_complex rfftwnd_f77_one_real_to_complex_ #define rfftw3d_f77_mpi_create_plan rfftw3d_f77_mpi_create_plan_ #define rfftwnd_f77_mpi_destroy_plan rfftwnd_f77_mpi_destroy_plan_ #define rfftwnd_f77_mpi rfftwnd_f77_mpi_ #define rfftwnd_f77_mpi_local_sizes rfftwnd_f77_mpi_local_sizes_ #endif #ifndef HAVE_USE_MPI_F08 INCLUDE 'mpif.h' #endif end module grafic_types mpgrafic-0.3.15/src/mpgrafic.1000066400000000000000000000027731314565475200160560ustar00rootroot00000000000000.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.4. .TH MPGRAFIC "1" "August 2017" "mpgrafic 0.3.15" "User Commands" .SH NAME mpgrafic \- MPI version of N-body initial conditions grafic package .SH SYNOPSIS .B mpgrafic [\fI\,OPTION\/\fR...] [\fI\,< INPUT_FILE\/\fR] [\fI\,> OUTPUT_FILE\/\fR] .SH DESCRIPTION mpgrafic produces initial conditions files for N\-body simulations of cosmological large\-scale structure formation. It is a free\-licensed, MPI\-parallelised, rewritten version of Ed Bertschinger's grafic\-1 program, producing output files in the grafic format. It includes options for an Eisenstein and Hu baryonic wiggles power spectrum, for using a low\-resolution map for large\-scale modes in the spirit of grafic\-2, and together with constrfield, can be used for generating constrained initial conditions. Details are given in Prunet et al (2008) http://cdsads.u\-strasbg.fr/abs/2008ApJS..178..179P. .PP Most recent source code: git clone https://broukema@bitbucket.org/broukema/mpgrafic.git .TP \-?, \fB\-\-help\fR Give this help list .TP \fB\-\-np\fR=\fI\,INTEGER\/\fR Number of particles per dimension .TP \fB\-\-usage\fR Give a short usage message .TP \fB\-V\fR, \fB\-\-version\fR Print program version .SH AUTHOR Written by Simon Prunet, Christophe Pichon et al. .SH COPYRIGHT Copyright \(co 2008\-2017 Prunet, Pichon, Roukema. This program is free software; you may redistribute it under the terms of the GNU General Public License version 2 or later. This program has absolutely no warranty. mpgrafic-0.3.15/src/mpgrafic.f90000066400000000000000000000644051314565475200163140ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! mpgrafic - MPI version of N-body initial conditions grafic package ! ! Copyright (C) 2008-2017 by Simon Prunet, Christophe Pichon et al ! ! prunet iap.fr ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc #include "../config.h" program grafic1 ! Generate initial conditions for cosmological N-body integration ! as a Gaussian random field. ! This version does not do constraints. Instead, it produces output ! compatible with grafic2 for multiscale initial conditions. ! Disk use: lun=10 is output file, lun=11 is temp files. ! use grafic_types use transform use grafic_io use normalize use iso_C_binding use wrap_rfftw3d_mod implicit none #include "grafic1.inc" #ifdef ADD1US #define rfftw3d_f77_create_plan rfftw3d_f77_create_plan_ #define rfftwnd_f77_destroy_plan rfftwnd_f77_destroy_plan_ #define rfftwnd_f77_one_real_to_complex rfftwnd_f77_one_real_to_complex_ /* mpgrafic-0.3.10 - shifted this routine to interface with iso_C_binding; #define rfftw3d_f77_mpi_create_plan rfftw3d_f77_mpi_create_plan_ */ #define rfftwnd_f77_mpi_destroy_plan rfftwnd_f77_mpi_destroy_plan_ #define rfftwnd_f77_mpi rfftwnd_f77_mpi_ #define rfftwnd_f77_mpi_local_sizes rfftwnd_f77_mpi_local_sizes_ #endif !c !c Top grid mesh size. !c ! Can be overridden at ./configure stage, e.g.: ! CFLAGS="${CFLAGS} -DMPGRAFIC_NP_DEFAULT=1024" ./configure #ifndef MPGRAFIC_NP_DEFAULT #define MPGRAFIC_NP_DEFAULT 256 #endif integer :: np1 = MPGRAFIC_NP_DEFAULT integer :: np2 = MPGRAFIC_NP_DEFAULT integer :: np3 = MPGRAFIC_NP_DEFAULT integer io_status #ifdef SING real(sp), dimension(:), allocatable :: f #else real(dp), dimension(:), allocatable :: f #endif real dx,x1o,x2o,x3o,xoff,fm integer irand,itide,m1s,m2s,m3s !,m1off,m2off,m3off #ifdef HAVE_LIBGSL integer (c_int64_t) iseed #else integer iseed #endif integer m1t,m2t,m3t,m1offt,m2offt,m3offt !integer i1,i2,i3, l1,l2,l3, m1,m2,m3 integer icomp,idim,nrefine integer ipad, nxs, nys, nzs #ifdef HAVE_LIBGSL integer (c_int64_t) iseeds #else integer iseeds #endif !double precision lsigma double precision twopi,sigma,dsigma,rombin !,sigmadispl double precision dsigmadispl parameter (twopi=6.283185307179586d0) logical hanning character(len=128) :: filename, small_file_name, small_kfile_name real astart,omegam,omegav,h0,dladt,fomega,vfact,pbar,pcdm real omegab,omegahdm,degen_hdm real asig,dxr,dpls,dplus,adp integer ierr, myid, status type(c_ptr) :: plan, iplan integer :: local_z_start,local_nz,local_y_start,local_ny integer :: nx, ny, nz integer :: total_local_size integer :: local_z_starts, local_nzs, local_y_starts, local_nys, total_local_sizes type(taille) :: headt, shtaille type(cosmo) :: headc, shcosmo character(len=128) :: outputfile character(len=128) :: command_line_arg1 ! so far very limited options logical :: help_only_arg = .false. common /cosmoparms/ omegam,omegav,h0 common /cosmoparms2/ omegab,omegahdm,degen_hdm common /dsig/ asig,dxr external pbar,pcdm,dsigma,dsigmadispl,rombin,dplus,adp one_command_line_argument: if(command_argument_count() .gt. 0)then call get_command_argument(1,command_line_arg1) command_line_arg1 = trim(command_line_arg1) ! TODO: this is a minimal hack - consider the GNU argp library for more general options if(command_line_arg1 == '-V' .or. & command_line_arg1 == '--version')then help_only_arg = .true. write(*,'(a)')PACKAGE_STRING write(*,'(a)')'Written by Simon Prunet, Christophe Pichon et al.' write(*,'(a)')'' write(*,'(a)')'Copyright (C) 2008-2017 Prunet, Pichon, Roukema.' write(*,'(a)')'This program is free software; you may redistribute it under the terms of' write(*,'(a)')'the GNU General Public License version 2 or later. This program has' write(*,'(a)')'absolutely no warranty.' elseif(command_line_arg1 == '-h' .or. & command_line_arg1 == '-?' .or. & command_line_arg1 == '--help')then help_only_arg = .true. ! TODO: modularise this out to a documentation type file write(*,'(a)')'Usage: mpgrafic [OPTION...] [< INPUT_FILE] [> OUTPUT_FILE]' write(*,'(a)')'' write(*,'(a)')'mpgrafic produces initial conditions files for N-body simulations of' write(*,'(a)')'cosmological large-scale structure formation. It is a free-licensed,' write(*,'(a)')"MPI-parallelised, rewritten version of Ed Bertschinger's grafic-1" write(*,'(a)')'program, producing output files in the grafic format. It includes' write(*,'(a)')'options for an Eisenstein and Hu baryonic wiggles power spectrum, for' write(*,'(a)')'using a low-resolution map for large-scale modes in the spirit of' write(*,'(a)')'grafic-2, and together with constrfield, can be used for generating' write(*,'(a)')'constrained initial conditions. Details are given in Prunet et al' write(*,'(a)')'(2008) http://cdsads.u-strasbg.fr/abs/2008ApJS..178..179P.' write(*,'(a)')'' write(*,'(a)')'Most recent source code:' write(*,'(a)')'git clone https://broukema@bitbucket.org/broukema/mpgrafic.git' write(*,'(a)')'' write(*,'(a)')' -?, --help Give this help list' write(*,'(a)')' --np=INTEGER Number of particles per dimension' write(*,'(a)')' --usage Give a short usage message' write(*,'(a)')' -V, --version Print program version' elseif(command_line_arg1 == '--usage')then help_only_arg = .true. write(*,'(a)')'Usage: mpgrafic [-?hV] [--np=INTEGER] [--help] [--usage]' write(*,'(a)')' [--version] [< INPUT_FILE] [> OUTPUT_FILE]' elseif( command_line_arg1(1:5) == '--np=' .and. & len(command_line_arg1) .gt. 5 )then read(command_line_arg1(6:len(command_line_arg1)), & *,iostat=io_status) np1 ! allows 10^30-particle simulations... if(io_status.eq.0)then !override configured value np2 = np1 np3 = np1 else write(*,'(a)')'Warning: error reading option --np.' endif endif if(help_only_arg)then ! if valid command line argument found stop ! user only wants to know how to get started endif endif one_command_line_argument ! call mpi_init(ierr) call mpi_comm_rank(mpi_comm_world,myid,ierr) if (myid==0) then print* print*,'Will generate initial conditions on grid of size ', & & np1,np2,np3 print* endif ! We follow grafic conventions: slowest varying index is nz ! The domain decomposition will be done in this direction nx=np1 ny=np2 nz=np3 ! ! Initialize power spectrum. call pini ! Initialize grid spacing. if (myid==0) then print*,'Enter dx (initial particle spacing in Mpc, not Mpc/h)' print*,' or enter -boxlength in Mpc/h' print*,' i.e. dx in Mpc if > 0, or -boxlength in Mpc/h if < 0' read(*,*) dx write(*,'(f15.5)') dx endif call mpi_bcast(dx,1,mpi_real,0,mpi_comm_world,ierr) if (dx.lt.0.0) then dx=-dx*100./(h0*nx) if (myid==0) write(*,'(a,f15.5,a)') ' dx=',dx,' Mpc' end if ! Set astart based on smallest grid spacing. if (myid==0) then print*,'Enter 1 if these initial conditions will not be ', & & 'refined, otherwise' print*,' enter the ultimate refinement factor for the ', & & 'smallest grid spacing' print*,' (This is used only to set astart.)' read(*,*) nrefine print*, nrefine endif call mpi_bcast(nrefine,1,mpi_integer,0,mpi_comm_world,ierr) if (nrefine.lt.1) then if (myid==0) print*,'Error! refinement factor must be >= 1' call mpi_finalize(ierr) stop end if if (nrefine.gt.1) then if (myid==0) print*,'nrefine>1 not implemented yet' call mpi_finalize(ierr) stop end if dxr=dx/nrefine asig=1.0d0 sigma=2.0*twopi*rombin(dsigma,0.0d0,0.5d0*twopi/dxr,1.0d-7) ! This is sigma at a=1. sigma=sqrt(sigma) !!!!!!!! ALL following !!$ are to remove R. Teyssier's astart and !!!!!!!! sigma computations.... !!$ sigmadispl=2.0*twopi* & !!$ & rombin(dsigmadispl,twopi/dxr/np1,0.5d0*twopi/dxr,1.0d-7) ! This is sigma at a=1. !!$ sigmadispl=sqrt(sigmadispl) !!$ sigma=MAX(sigma,sigmadispl/dxr) ! Normalize so that rms density flutuation=sigstart at starting ! redshift scaling back the fluctuations as if they grew like cdm. dpls=sigstart/sigma*dplus(1.0,omegam,omegav) astart=adp(dpls,omegam,omegav) asig=astart sigma=2.0*twopi*rombin(dsigma,0.0d0,0.5d0*twopi/dxr,1.0d-7) !!$ sigma=2.0*twopi*rombin(dsigma,twopi/dxr/np1,0.5d0*twopi/ & !!$ & dxr,1.0d-7) sigma=sqrt(sigma) if (myid==0) then write(*,'(a,es15.5)') 'Scaling initial conditions to starting a=',astart write(*,'(a,es15.5)') ' when sigma(delta) at ultimate refinement scale=' & & ,real(sigma) endif !sigmadispl=2.0*twopi*rombin(dsigmadispl,0.0d0,0.5d0*twopi/dxr,1.0d-7) !!$ sigmadispl=2.0*twopi* & !!$ & rombin(dsigmadispl,twopi/dxr/np1,0.5d0*twopi/dxr,1.0d-7) !!$ sigmadispl=sqrt(sigmadispl) !!$ if (myid==0) then !!$ print*,' when sigma(displ) at ultimate refinement scale=', & !!$ & real(sigmadispl),' Mpc ' !!$ print*,' ', & !!$ & real(sigmadispl)/dxr,' dx' !!$ print* !!$ endif !!!!!!!! END OF astart/sigma modifications. Code should be back to !!!!!!!! original grafic1 starting conditions.... ! velocity (proper km/s) = Displacement (comoving Mpc at astart) * vfact. ! vfact = dln(D+)/dtau where tau=conformal time. vfact=fomega(astart,omegam,omegav) & & *h0*dladt(astart,omegam,omegav)/astart if (myid==0) write(*,'(a,es15.5)') 'vfact=',vfact ! ! Now set output parameters. There are two cases: ! hanning=T: no further refinement. ! hanning=F: prepare for further refinement. ! if (myid==0) then print*,'Enter 0 for final output or 1 for further refinement' read(*,*) irand print*, irand endif call mpi_barrier(mpi_comm_world,ierr) call mpi_bcast(irand,1,mpi_integer,0,mpi_comm_world,ierr) if (irand.eq.1) then if (myid==0) print*,'Further refinement (input to grafic2) not implemented yet' call mpi_finalize(ierr) stop endif !!$ if (irand.eq.1) then !!$ hanning=.false. !!$ if (myid==0) print*,'Enter size (n1c,n2c,n3c) of the level-1 subgrid ', & !!$ & 'to be extracted.' !!$ if (myid==0) print*,' Sizes must be even numbers and be no larger than ', & !!$ & int(0.5*np1),int(0.5*np2),int(0.5*np3) !!$ read(*,*) m1s,m2s,m3s !!$ if (mod(m1s,2).ne.0.or.mod(m2s,2).ne.0.or.mod(m3s,2).ne.0) then !!$ if (myid==0) print*,'Error! Sizes must be even numbers!' !!$ call mpi_finalize(ierr) !!$ stop !!$ end if !!$ if (2*m1s.gt.np1.or.2*m2s.gt.np2.or.2*m3s.gt.np3) then !!$ if (myid==0) print*,'Error! Subgrid is too large' !!$ call mpi_finalize(ierr) !!$ stop !!$ end if !!$ if (myid==0) then !!$ print*,'Enter offset of level-1 subgrid (m1off,m2off,m3off).' !!$ print*,' Offsets are relative to level-0 grid corner.' !!$ print*,' Offsets may be positive or negative, with absolute ', & !!$ & ' values no larger than',int(0.5*np1),int(0.5*np2),int(0.5*np3) !!$ endif !!$ read(*,*) m1off,m2off,m3off !!$ ! Now get coordinates for tidal volume. !!$ if (myid==0) print*,'Enter size (m1t,m2t,m3t) of the final subvolume, ', & !!$ & 'in units of top grid spacing' !!$ read(*,*) m1t,m2t,m3t !!$ if (m1t.gt.m1s.or.m2t.gt.m2s.or.m3t.gt.m3s) then !!$ if (myid==0) print*,'Error! Final subvolume cannot be larger than ', & !!$ & 'level-1 subgrid' !!$ call mpi_finalize(ierr) !!$ stop !!$ end if !!$ if (myid==0) then !!$ print*,'Enter offset of final subvolume (m1offt,m2off2,m3offt).' !!$ print*,' Offsets are relative to level-0 grid corner.' !!$ print*,' Final subvolume must lie within level-1 subgrid' !!$ endif !!$ read(*,*) m1offt,m2offt,m3offt !!$ if (m1offt.lt.m1off.or.m1offt+m1t.gt.m1off+m1s.or. & !!$ & m2offt.lt.m2off.or.m2offt+m2t.gt.m2off+m2s.or. & !!$ & m3offt.lt.m3off.or.m3offt+m3t.gt.m3off+m3s) then !!$ if (myid==0) print*,'Error! Final subvolume isn''t contained within ', & !!$ & 'level-1 subgrid' !!$ call mpi_finalize(ierr) !!$ stop !!$ end if !!$ ! Coordinates of the subgrid corner. !!$ x1o=m1off*dx !!$ x2o=m2off*dx !!$ x3o=m3off*dx !!$ if (myid==0) then !!$ print*,'Grafic1 will output level-1 subgrid as follows:' !!$ print*,' xmin, xmax = ',x1o,x1o+m1s*dx !!$ print*,' ymin, ymax = ',x2o,x2o+m2s*dx !!$ print*,' zmin, zmax = ',x3o,x3o+m3s*dx !!$ print*,'Grafic1 will compute tides assuming final subvolume:' !!$ print*,' xmin, xmax = ',m1offt*dx,(m1offt+m1t)*dx !!$ print*,' ymin, ymax = ',m2offt*dx,(m2offt+m2t)*dx !!$ print*,' zmin, zmax = ',m3offt*dx,(m3offt+m3t)*dx !!$ endif !!$ ! Open output file and write header. !!$ open(10,file='grafic2.top',form='unformatted',status='unknown') !!$ rewind 10 !!$ write(10) 2*m1s,2*m2s,2*m3s,dx,x1o,x2o,x3o,m1t,m2t,m3t, & !!$ & m1offt-m1off,m2offt-m2off,m3offt-m3off,hanning,astart, & !!$ & omegam,omegav,h0 !!$ if (myid==0) print*,'Output file is grafic2.top; use as input to subsequent', & !!$ & ' run of grafic2' !!$ else hanning=.false. m1s=np1 !Unused here... m2s=np2 !Unused here... m3s=np3 !Unused here... x1o=0.0 x2o=0.0 x3o=0.0 if (myid==0) then print*,'Setting output grid to ',m1s,m2s,m3s print*,'Enter to skip output grid size' read(*,*) print*,'Enter to skip output grid offset' read(*,*) print*,'Enter to skip final grid size' read(*,*) print*,'Enter to skip final grid offset' read(*,*) print*,'Will produce output files ic_deltab, ic_velb[xyz],', & & ' ic_velc[xyz]' endif !!$end if call mpi_barrier(mpi_comm_world,ierr) ! Set parameters for subgrid noise. if (myid==0) then print* print*,'Subgrid white noise:' print*,' Choose irand (1 or 2) from the following list:' ! print*,' irand=0 to generate new noise and don''t save it' print*,' irand=1 to generate new noise and save to file' print*,' irand=2 to read noise from existing file' print*,'Enter irand' read(*,*) irand print*, irand endif call mpi_barrier(mpi_comm_world,ierr) call mpi_bcast(irand,1,mpi_integer,0,mpi_comm_world,ierr) if (irand.lt.0.or.irand.gt.2) then if (myid==0) print*,'Illegal value of irand' call mpi_finalize(ierr) stop end if if (myid==0) then print*,' Enter random number seed (9-digit integer, ignored ', & & 'if irand=2)' read(*,*) iseed write(*,'(i12)') iseed endif call mpi_barrier(mpi_comm_world,ierr) #ifdef HAVE_LIBGSL call mpi_bcast(iseed,1,mpi_integer8,0,mpi_comm_world,ierr) #else call mpi_bcast(iseed,1,mpi_integer,0,mpi_comm_world,ierr) #endif filename='' if (myid==0) then print*,' Enter filename of white noise file (or ', & & 'if irand=0)' read(*,'(a)') filename print*,filename endif call mpi_barrier(mpi_comm_world,ierr) ! filename='white.dat' ! filename is needed by other cpus (to read or write) call mpi_bcast(filename,128,mpi_character,0,mpi_comm_world,ierr) ! print*,'in mpgrafic, filename is ','***'//trim(filename)//'***' ! Ask if padding of small k modes is required if (myid==0) then print*,' Enter 1 if padding of large scales is required, 0 otherwise' read(*,*) ipad print*, ipad endif call mpi_barrier(mpi_comm_world,ierr) call mpi_bcast(ipad,1,mpi_integer,0,mpi_comm_world,ierr) small_file_name='' if (myid==0) then print*,' Enter padding file name (white noise format, ignored if ipad=0)' read(*,'(a)') small_file_name print*, small_file_name endif call mpi_barrier(mpi_comm_world,ierr) call mpi_bcast(small_file_name,128,mpi_character,0,mpi_comm_world,ierr) ! Compute small k modes from small file and store them, if needed small_kfile_name='ksmall' if (ipad==1) then if (myid==0) then print*,' Will compute the large scales from file ', trim(small_file_name) print*,' Beware that the large scales are assumed to be prewhitened, ' print*,' and that the constraints are assumed to be imposed with the same ' print*,' power spectrum: cosmologies of small and large k modes need to be ' print*,' consistent...' endif !!$ call grafic_read_header(small_file_name,shtaille,shcosmo) !!$ nxs=shtaille%nx !!$ nys=shtaille%ny !!$ nzs=shtaille%nz call grafic_read_header_white(small_file_name,nxs,nys,nzs,iseeds) call rfftw3d_f77_mpi_create_plan_c_wrap(plan,mpi_comm_world,nxs,nys,nzs, & & fftw_real_to_complex,fftw_estimate) call rfftwnd_f77_mpi_local_sizes(plan,local_nzs,local_z_starts, & & local_nys, local_y_starts, total_local_sizes) allocate(f(total_local_sizes)) call grafic_read(f,local_nzs,local_z_starts,nys,nxs,small_file_name,white_in=.true.) ! Make sure avg is 0 and rms is 1 #ifndef NO_NORM_WHITE call mpnorm(local_nzs,nzs,nys,nxs,total_local_sizes,f) #endif ! Normalise a la Bertschinger f = f/sqrt(real(nxs*nys,dp)*nzs) call fft_mpi(plan,f,total_local_sizes) ! Scale small grid power to large grid ! f = f*real(np1*np2,dp)*np3/real(nxs*nys*nzs,dp) call rfftwnd_f77_mpi_destroy_plan(plan) shtaille%nx=nxs shtaille%ny=nys shtaille%nz=nzs if (myid==0) call grafic_write_header(small_kfile_name,shtaille, & & shcosmo) call mpi_barrier(mpi_comm_world,ierr) call grafic_write(f,local_nzs,local_z_starts,nys,nxs,small_kfile_name, & & padding_in=.true.) deallocate(f) endif ! Compute local buffer size from total grid size, and prepare fftw ! plans. Beware that domain decomposition is done along nx... ! (Slowest varying dimension in the array) call rfftw3d_f77_mpi_create_plan_c_wrap(plan,mpi_comm_world,nx,ny,nz, & fftw_real_to_complex, fftw_estimate) call rfftw3d_f77_mpi_create_plan_c_wrap(iplan,mpi_comm_world,nx,ny,nz, & fftw_complex_to_real, fftw_estimate) call rfftwnd_f77_mpi_local_sizes(plan,local_nz,local_z_start,local_ny, & local_y_start,total_local_size) if (total_local_size <= 0) then if (myid==0) then print*,'Beware: size of local buffers does not fit in 4 bits !' print*,'Use with a bigger number of processes ...' print*,'Aborting' endif call mpi_finalize(ierr) stop endif ! ! Outer loop over components to be refined. ! do icomp=0,12 ! 0: baryon density. ! 1,2: inner,outer baryon x-velocity. ! 3,4: inner,outer baryon y-velocity. ! 5,6: inner,outer baryon z-velocity. ! 7,8: inner,outer CDM x-velocity. ! 9,10: inner,outer CDM y-velocity. ! 11,12: inner,outer CDM z-velocity. ! ! If not generating grafic2.dat for further refinement, and ! if icomp=odd, then skip. if (mod(icomp,2).eq.1) cycle ! ! Optional half-grid offset to velocity fields. if (icomp.gt.0.and.icomp.le.6) then xoff=0.5*dx*offvelb else if (icomp.gt.6) then xoff=0.5*dx*offvelc else xoff=0.0 end if ! Don't need to recompute random numbers. if (icomp.gt.0.and.irand.eq.1) irand=2 ! ! Generate random fields. idim=0,1,2,3 for density, displacement. itide=0 if (mod(icomp,2).eq.0) then idim=icomp/2 ! Outer case. ! if (.not.hanning.and.idim.gt.0) itide=1 else ! Inner case. idim=(icomp+1)/2 ! if (.not.hanning.and.idim.gt.0) itide=-1 end if allocate(f(total_local_size),stat=status) if (status /= 0) then print*,'Could not allocate array, aborting' call mpi_finalize(ierr) stop endif ! First Feed the headers... headt%nx=np1 headt%ny=np2 headt%nz=np3 headt%dx=dx headt%lx=x1o+xoff headt%ly=x2o+xoff headt%lz=x3o+xoff headc%astart=astart headc%omegam=omegam headc%omegav=omegav headc%h0=h0 if (idim.le.3) then call mpic4(idim,irand,iseed,itide,m1t,m2t,m3t,m1offt,m2offt, & & m3offt,hanning,filename,astart,pbar,dx,xoff,f,fm, & & plan,iplan,local_nz,local_z_start,total_local_size, & & headt,headc,small_kfile_name,ipad, & & np1,np2,np3) else idim=idim-3 call mpic4(idim,irand,iseed,itide,m1t,m2t,m3t,m1offt,m2offt, & & m3offt,hanning,filename,astart,pcdm,dx,xoff,f,fm, & & plan,iplan,local_nz,local_z_start,total_local_size, & & headt,headc,small_kfile_name,ipad, & & np1,np2,np3) end if ! ! Prepare data for output. ! if (.true.) then ! For a version of RAMSES much older than 2013, you may have ! to comment out the following line; however, using such an ! out-of-date version of RAMSES would be unwise. if (idim > 0) f = f*vfact ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! Output files. if (icomp.eq.0) then outputfile='ic_deltab' else if (icomp.eq.2) then outputfile='ic_velbx' else if (icomp.eq.4) then outputfile='ic_velby' else if (icomp.eq.6) then outputfile='ic_velbz' else if (icomp.eq.8) then outputfile='ic_velcx' else if (icomp.eq.10) then outputfile='ic_velcy' else if (icomp.eq.12) then outputfile='ic_velcz' end if if (myid==0) then headt%nx=np1 headt%ny=np2 headt%nz=np3 headt%dx=dx headt%lx=x1o+xoff headt%ly=x2o+xoff headt%lz=x3o+xoff headc%astart=astart headc%omegam=omegam headc%omegav=omegav headc%h0=h0 call grafic_write_header(outputfile,headt,headc) endif call mpi_barrier(mpi_comm_world,ierr) call grafic_write(f,local_nz,local_z_start,ny,nx,outputfile) endif ! subgrid is not implemented... !!$ else !!$ ! hanning=F, extract next-level subgrid and append to grafic2.dat. !!$ ! First surround subvolume with 1/2-size buffer and wrap periodically. !!$ sigma=0.0 !!$ do m3=1,2*m3s !!$ i3=m3+m3off !!$ ! Periodic boundary conditions on top grid. !!$ if (i3.lt.1) i3=i3+np3 !!$ if (i3.gt.np3) i3=i3-np3 !!$ l3=i3 !!$ if (m3.gt.1.5*m3s) l3=l3-2*m3s !!$ if (l3.lt.1) l3=l3+np3 !!$ do m2=1,2*m2s !!$ i2=m2+m2off !!$ if (i2.lt.1) i2=i2+np2 !!$ if (i2.gt.np2) i2=i2-np2 !!$ l2=i2 !!$ if (m2.gt.1.5*m2s) l2=l2-2*m2s !!$ if (l2.lt.1) l2=l2+np2 !!$ do m1=1,2*m1s !!$ i1=m1+m1off !!$ if (i1.lt.1) i1=i1+np1 !!$ if (i1.gt.np1) i1=i1-np1 !!$ l1=i1 !!$ if (m1.gt.1.5*m1s) l1=l1-2*m1s !!$ if (l1.lt.1) l1=l1+np1 !!$ slice(m1,m2)=f(l1,l2,l3) !!$ sigma=sigma+f(l1,l2,l3)**2 !!$ end do !!$ end do !!$ write(10) ((slice(m1,m2),m1=1,2*m1s),m2=1,2*m2s) !!$ end do !!$ sigma=sqrt(sigma/(8*m1s*m2s*m3s)) !!$ if (myid==0) print*,'After extraction, component ',icomp, & !!$ & ' has subvolume RMS=',real(sigma) !!$ end if ! End loop over icomp. deallocate(f) enddo ! !!$if (.not.hanning) close(10) call mpi_finalize(ierr) stop end program grafic1 !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function dsigma(ak) ! This function calculates the variance of density with a Hanning ! filter at the grid Nyquist frequency. ! implicit none double precision dsigma,ak real asig,dx,p common /dsig/ asig,dx external p ! if (ak.le.0.0d0.or.ak.gt.3.1415926535898d0/dx) then dsigma=0.0d0 return end if ! Hanning filter. dsigma=ak*ak*p(real(ak),asig)*cos(0.5*ak*dx) ! return end function dsigma !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function dsigmadispl(ak) ! This function calculates the variance of displacement with a Hanning ! filter at the grid Nyquist frequency. ! implicit none double precision dsigmadispl,ak real asig,dx,p common /dsig/ asig,dx external p ! if (ak.le.0.0d0.or.ak.gt.3.1415926535898d0/dx) then dsigmadispl=0.0d0 return end if ! Hanning filter. dsigmadispl=ak*ak*p(real(ak),asig)/ak/ak/3.*cos(0.5*ak*dx) ! return end function dsigmadispl mpgrafic-0.3.15/src/mpic4.f90000066400000000000000000000422651314565475200155400ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! Copyright (C) 2008-2017 by Simon Prunet, Christophe Pichon et al ! ! prunet iap.fr ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc #include "../config.h" subroutine mpic4(idim,irand,iseed,itide,m1s,m2s,m3s,m1off, & & m2off,m3off,hanning,filename,astart,pk,dx,xoff,f,fm, & & plan,iplan,local_nz,local_z_start,total_local_size, & & headt,headc,small_kfile_name,ipad, & & np1,np2,np3) ! Generate an unconstrained sample of (rho,psi1,psi2,psi3,phi) for ! idim=0,1,2,3,4. ! Input: idim, irand, iseed, itide, m?s, m?off, hanning, filename, ! astart, pk, dx, xoff ! irand=0: use randg to generate white noise, don't save. ! irand=1: use randg to generate white noise, then save in real space ! in filename. ! irand=2: read filename to get random numbers. ! iseed: 64-bit signed integer random number seed if GSL is available; ! otherwise, 32-bit signed integer random number seed. ! Beware that the pseudo-random values will differ between these ! two cases! ! itide=0 to use full subvolume for computing f. ! itide=1 to set xi=0 inside subvolume so as to get outer field. ! itide=-1 to set xi=0 outside subvolume so as to get inner field. ! m?s = size of next-level subvolume to split if itide.ne.0. ! m?off = offset of next-level subvolume to split if itide.ne.0 ! hanning=T to apply hanning filter to f. ! hanning=F to not apply hanning filter to f. ! filename = file containing random numbers in real space. ! astart = expansion factor ! pk(ak,astart) = power spectrum function for wavenumber ak ! dx = grid spacing. ! xoff = offset to evaluate fields (e.g. use to shift baryon or cdm fields). ! Output: f=fc (sampled field in real space), fm (maximum absolute value of f). ! N.B. f and fc must point to the same place in memory - they are listed ! separately in the subroutine call because f77 will not allow equivalencing ! pointers. The calling routine must pass the same pointer for each. use grafic_types use grafic_io use transform use normalize use iso_C_binding #ifdef HAVE_LIBGSL use wrap_gsl_rng_mod #endif use random use paste implicit none #include "grafic1.inc" integer :: np1, np2, np3 integer :: n12,n22,n32,n23,n2p1,npow !parameter (n12=np1/2,n22=np2/2,n32=np3/2,n23=np2*np3) !parameter (n2p1=2*(np1/2+1)) parameter (npow=30720) integer idim,irand,itide,m1s,m2s,m3s,m1off,m2off,m3off #ifdef HAVE_LIBGSL integer (c_int64_t) iseed #else integer iseed #endif logical hanning character(len=128) :: filename, small_kfile_name integer :: ipad type(taille) :: headt type(cosmo) :: headc real astart,pk,dx,xoff,fm type(c_ptr) :: plan, iplan integer :: local_nz, local_z_start integer :: total_local_size #ifdef DOUB real(dp), dimension(total_local_size) :: f #else real(sp), dimension(total_local_size) :: f #endif integer :: myid, nproc, ierr, i_proc #ifdef HAVE_LIBGSL integer(c_int64_t) :: seeds(MaxRandNumStreams,1) integer(c_int64_t) :: seed_myid ! avoid repeatedly re-calculating address #else integer :: seeds(MaxRandNumStreams,IRandNumSize) #endif integer(i8b) :: index complex(dpc) :: z, ctemp !real(dp) :: debug real lfm real(dp) :: twopi,avg,lavg,sigma,lsigma,chisq,lchisq parameter (twopi=6.283185307179586d0) integer j,i1,i2,i3,k1,k2,k3,k23,jp,modes integer(i8b) :: ndof real dk1,dk2,dk3,d3k,akmax,akmaxf,ak,ak23,akk,fact real(dp) :: xr real ak1,ak2,ak3,ak33,anu,dq,tf,tsav(0:npow),theta !logical inflag, white_in external pk n12=np1/2 n22=np2/2 n32=np3/2 n23=np2*np3 n2p1=2*(np1/2+1) call mpi_comm_rank(mpi_comm_world,myid,ierr) call mpi_comm_size(mpi_comm_world,nproc,ierr) if (idim.lt.0.or.idim.gt.4) then if (myid==0) print*,'Error in ic4! Need idim=0,1,2,3,4' call mpi_finalize(ierr) stop end if if (irand.lt.0.or.irand.gt.2) then if (myid==0) print*,'Error in ic4! Need irand=0,1,2' call mpi_finalize(ierr) stop end if if (itide.lt.-1.or.itide.gt.1) then if (myid==0) print*,'Error in ic4! Need itide=-1,0,1' call mpi_finalize(ierr) stop end if dk1=twopi/(np1*dx) dk2=twopi/(np2*dx) dk3=twopi/(np3*dx) d3k=dk1*dk2*dk3 akmax=twopi/dx ! Precompute transfer function table for interpolation. ! N.B. must go to at least sqrt(3)*akmax/2 unless use Hanning filter, ! in which case go to akmax/2. if (hanning) then akmaxf=akmax/2.0 else akmaxf=akmax end if do j=0,npow ak=j*akmaxf/npow tsav(j)=sqrt(pk(ak,astart)*d3k) if (hanning) tsav(j)=tsav(j)*cos(0.5*ak*dx) if (idim.gt.0.and.j.gt.0) then tsav(j)=tsav(j)/(ak*ak) end if end do ! Get white noise sample. if (irand.lt.2) then if (myid==0) print*,'Warning: Generating new random numbers in mpic4!' #ifdef HAVE_LIBGSL ! create GSL rng object for generating seeds if(nproc > MaxRandNumStreams) & write(*,'(a,i8,a,i8)')'Warning: nproc = ',nproc, & '> MaxRandNumStreams = ',MaxRandNumStreams if(myid.eq.0)call get_gsl_rng_seeds & (iseed, MaxRandNumStreams, seeds(:,1)) #else call rans(nproc,iseed,seeds) ! Generate seeds for parallel random number generator #endif call mpi_barrier(mpi_comm_world,ierr) if(myid.eq.0)write(*,'(a,i12,i12)')' myid,seeds: ',myid,seeds(1:nproc,1) #ifdef HAVE_LIBGSL if(myid.eq.0)then ! Send the seeds to each other thread (in GSL case really only ! need to send one seed, but seeds is declared for the general case): do i_proc=1,nproc-1 ! TODO: replace by broadcast or scatter? call mpi_send(seeds,MaxRandNumStreams,mpi_integer8,i_proc, & 0, & mpi_comm_world, ierr) ! send the seeds enddo else call mpi_recv(seeds,MaxRandNumStreams,mpi_integer8,0, & 0, & mpi_comm_world, MPI_STATUS_IGNORE, ierr) endif #endif ! Warning about nproc > MaxRandNumStreams given above. #ifdef HAVE_LIBGSL seed_myid = seeds(mod(myid,MaxRandNumStreams)+1, 1) #endif do i3=1,local_nz do i2=1,np2 do i1=1,np1 index = int((i3-1)*np2+i2-1,8)*n2p1+i1 #ifdef HAVE_LIBGSL call gauss_gsl(seed_myid,xr,0) #else call gaussdev(seeds(myid+1,:),xr) #endif #ifdef DOUB f(index)=xr #else f(index)=real(xr,kind=sp) #endif end do end do end do #ifdef HAVE_LIBGSL call gauss_gsl(seed_myid,xr,1) ! free memory on this thread #endif ! Output white noise field. if (irand.eq.1 .and. ipad.eq.0) then if (myid==0) then call grafic_write_header_white(filename,np1,np2,np3,iseed) endif call mpi_barrier(mpi_comm_world,ierr) call grafic_write(f,local_nz,local_z_start,np2,np1,filename,white_in=.true.) end if else ! irand=2. if (myid==0) then print*,'Reading random numbers used in ic4 from ',trim(filename) call grafic_read_header_white(filename,i1,i2,i3,iseed) endif call mpi_barrier(mpi_comm_world,ierr) call mpi_bcast(i1,1,mpi_integer,0,mpi_comm_world,ierr) call mpi_bcast(i2,1,mpi_integer,0,mpi_comm_world,ierr) call mpi_bcast(i3,1,mpi_integer,0,mpi_comm_world,ierr) #ifdef HAVE_LIBGSL call mpi_bcast(iseed,1,mpi_integer8,0,mpi_comm_world,ierr) #else call mpi_bcast(iseed,1,mpi_integer,0,mpi_comm_world,ierr) #endif if (i1.ne.np1.or.i2.ne.np2.or.i3.ne.np3) then if (myid==0) then print*,'Error in ic4! file has np1,np2,np3=',i1,i2,i3 print*,' Expected ',np1,np2,np3 endif call mpi_finalize(ierr) stop end if if (myid==0) write(*,'(a,i12)')' Random numbers generated with iseed=',iseed call mpi_barrier(mpi_comm_world,ierr) call grafic_read(f,local_nz,local_z_start,np2,np1,filename,white_in=.true.) end if ! Make sure input (big) white noise box has stdev=1 ! Putting this out of if construct makes sure that ic_deltab is the ! same wether irand=2 or irand=1 (when recycling the same white ! noise box of course). Small difference remains if compiled with ! DOUB, because white noise is stored in single precision ! Can be bypassed by defining NO_NORM_WHITE at compile time. #ifndef NO_NORM_WHITE if (myid==0) then print*,'Normalizing rms, subtracting average' endif call mpnorm(local_nz,np3,np2,np1,total_local_size,f) #endif ! Compute mean. lavg=0.0 do i3=1,local_nz do i2=1,np2 do i1=1,np1 index = int((i3-1)*np2+i2-1,8)*n2p1+i1 #ifdef DOUB lavg=lavg+f(index) #else lavg=lavg+real(f(index),kind=dp) #endif end do end do end do ! Mean is needed on every cpu !print*,'lavg = ',lavg call mpi_allreduce(lavg,avg,1,mpi_double_precision,mpi_sum,mpi_comm_world,ierr) avg=avg/(real(np1*np2,dp)*np3) fact=sqrt(1.0*np1*np2*np3) ! Enforce zero mean for simulations with periodic boundary conditions. ! Compute chisq for this sample, too. lchisq=0.0 do i3=1,local_nz do i2=1,np2 do i1=1,np1 ! Subtract mean. index=int((i3-1)*np2+i2-1,8)*n2p1+i1 #ifdef DOUB f(index)=f(index)-avg #else f(index)=f(index)-real(avg,kind=sp) #endif lchisq=lchisq+f(index)**2 ! Standard deviation is fact, but divide by np1*np2*np3=fact**2 to ! normalize f for FFT #ifdef DOUB f(index)=f(index)/fact #else f(index)=f(index)/real(fact,kind=sp) #endif end do end do end do call mpi_reduce(lchisq,chisq,1,mpi_double_precision,mpi_sum,0,mpi_comm_world,ierr) ndof=int(np1*np2,8)*np3-1 anu=(chisq-ndof)/sqrt(float(ndof)) if (myid==0) & write(*,'(a,f15.5,i15,es15.5)') 'ic4 white noise: chisq, dof, nu=', & & real(chisq),ndof,anu ! Transform noise to k-space. call fft_mpi(plan,f,total_local_size) ! Paste if needed large scales, before applying transfer function ! This means that the large scales have been prewhitened ... if (ipad .eq. 1) then call grid_paste(local_z_start,local_nz,headt,headc,f,small_kfile_name) if (irand .eq. 1) then ! Output padded white noise file if (myid==0) then call grafic_write_header_white(filename,np1,np2,np3,iseed) endif call mpi_barrier(mpi_comm_world,ierr) call fft_mpi(iplan,f,total_local_size) f = f/fact ! Renormalize to compensate backward FFT call grafic_write(f,local_nz,local_z_start,np2,np1,filename,white_in=.true.) call fft_mpi(plan,f,total_local_size) f = f/fact ! Renormalize to compensate forward FFT endif endif lchisq=0.0 lsigma=0.0 ! Generate unconstrained sample in Fourier transform space. do k3=1,local_nz ak3=(k3+local_z_start-1)*dk3 if (k3+local_z_start.gt.n32) ak3=ak3-akmax ak33=ak3*ak3 do k2=1,np2 ak2=(k2-1)*dk2 if (k2.gt.n22) ak2=ak2-akmax ak23=ak2*ak2+ak33 k23=k2-1+(k3-1)*np2 do k1=1,n12 ! Complex ! Do k1=n12+1 separately below. ak1=(k1-1)*dk1 akk=ak1*ak1+ak23 ak=sqrt(akk) ! Evaluate transfer function. dq=npow*ak/akmaxf if (dq.ge.npow) then tf=0.0 else jp=int(dq) dq=dq-jp tf=(1.0-dq)*tsav(jp)+dq*tsav(jp+1) end if ! Shift using offsets, with care at the Brillouin zone boundaries. theta=ak1*xoff if (k2.ne.n22+1) theta=theta+ak2*xoff if (k3+local_z_start.ne.n32+1) theta=theta+ak3*xoff z=cmplx(cos(theta),sin(theta),kind=dpc) ! These factors correctly average shifts at the Nyquist planes. if (k2.eq.n22+1) z=z*cos(ak2*xoff) if (k3+local_z_start.eq.n32+1) z=z*cos(ak3*xoff) ! Convolve white noise with transfer function. index = int((k3-1)*np2+k2-1,8)*n2p1+2*k1-1 !Real index #ifdef DOUB ctemp = cmplx(f(index),f(index+1),kind=dpc) #else ctemp = cmplx(real(f(index),kind=dp),real(f(index+1),kind=dp)) #endif ctemp = ctemp*z*tf if (idim.eq.1) then ctemp=cmplx(0.0,1.0)*ak1*ctemp else if (idim.eq.2) then ctemp=cmplx(0.0,1.0)*ak2*ctemp if (k2.eq.n22+1) ctemp=0.0 else if (idim.eq.3) then ctemp=cmplx(0.0,1.0)*ak3*ctemp if (k3+local_z_start.eq.n32+1) ctemp=0.0 end if ! Double the contribution to account for modes with k1 > n12+1 (k1 < 0). modes=2 if (k1.eq.1) modes=1 lsigma=lsigma+modes*ctemp*conjg(ctemp) if (idim.eq.0.or.idim.eq.4) then lchisq=lchisq+modes*tf*tf else lchisq=lchisq+modes*tf*tf*akk/3.0 end if ! Fill back buffer with ctemp #ifdef DOUB f(index) = real(ctemp) f(index+1) = aimag(ctemp) #else f(index) = real(ctemp,kind=sp) f(index+1) = real(aimag(ctemp),kind=sp) #endif enddo ! Do k1=n12+1. ak1=0.5*akmax akk=ak1*ak1+ak23 ak=sqrt(akk) index = int((k3-1)*np2+k2-1,8)*n2p1+np1+1 ! Evaluate transfer function. dq=npow*ak/akmaxf if (dq.ge.npow) then tf=0.0 else jp=int(dq) dq=dq-jp tf=(1.0-dq)*tsav(jp)+dq*tsav(jp+1) end if ! Shift using offsets, with care at the Brillouin zone boundaries. theta=0.0 if (k2.ne.n22+1) theta=theta+ak2*xoff if (k3+local_z_start.ne.n32+1) theta=theta+ak3*xoff z=cmplx(cos(theta),sin(theta),kind=dpc) ! These factors correctly average shifts at the Nyquist planes. z=z*cos(ak1*xoff) if (k2.eq.n22+1) z=z*cos(ak2*xoff) if (k3+local_z_start.eq.n32+1) z=z*cos(ak3*xoff) ! Convolve white noise with transfer function. #ifdef DOUB ctemp = cmplx(f(index),f(index+1),kind=dpc) #else ctemp = cmplx(real(f(index),kind=dp),real(f(index+1),kind=dp)) #endif ctemp = ctemp*z*tf if (idim.eq.1) then ctemp=0.0 else if (idim.eq.2) then ctemp=cmplx(0.0,1.0)*ak2*ctemp if (k2.eq.n22+1) ctemp=0.0 else if (idim.eq.3) then ctemp=cmplx(0.0,1.0)*ak3*ctemp if (k3+local_z_start.eq.n32+1) ctemp=0.0 end if modes=1 lsigma=lsigma+modes*ctemp*conjg(ctemp) if (idim.eq.0.or.idim.eq.4) then lchisq=lchisq+modes*tf*tf else lchisq=lchisq+modes*tf*tf*akk/3.0 end if ! Fill back buffer with ctemp #ifdef DOUB f(index)=real(ctemp) f(index+1)=aimag(ctemp) #else f(index)=real(ctemp,kind=sp) f(index+1)=real(aimag(ctemp),kind=sp) #endif enddo enddo call mpi_barrier(mpi_comm_world,ierr) ! Enforce zero mean. if (local_z_start==0) then f(1)=0 f(2)=0 endif ! Reduce local statistics on root proc !print*,'lchisq = ',lchisq !print*,'lsigma = ',lsigma call mpi_reduce(lchisq,chisq,1,mpi_double_precision,mpi_sum,0,mpi_comm_world,ierr) call mpi_reduce(lsigma,sigma,1,mpi_double_precision,mpi_sum,0,mpi_comm_world,ierr) chisq=sqrt(chisq) sigma=sqrt(sigma) ! Transform to position space. call fft_mpi(iplan,f,total_local_size) lfm=0.0 do i3=1,local_nz do i2=1,np2 do i1=1,np1 index=int((i3-1)*np2+i2-1,8)*n2p1+i1 #ifdef DOUB lfm=max(lfm,abs(f(index))) #else lfm=max(lfm,real(abs(f(index)),kind=dp)) #endif end do end do end do ! Reduce max on root proc call mpi_reduce(lfm,fm,1,mpi_real,mpi_max,0,mpi_comm_world,ierr) if (myid==0) then print*,'Statistics of ic4 for idim, itide=',idim,itide write(*,'(a,3f15.5)') & & ' Mean sigma, sampled sigma, maximum=',real(chisq), & & real(sigma),fm endif return end subroutine mpic4 mpgrafic-0.3.15/src/mpnorm.f90000066400000000000000000000071011314565475200160220ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! Copyright (C) 2008-2017 by Simon Prunet, Christophe Pichon et al ! ! prunet iap.fr ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! module normalize use grafic_types contains subroutine mpnorm(local_nz,nz,ny,nx,total_local_size,buffer) ! Arguments integer, intent(in) :: local_nz,nz,ny,nx,total_local_size #ifdef DOUB real(dp), dimension(total_local_size), intent(inout) :: buffer #else real(sp), dimension(total_local_size), intent(inout) :: buffer #endif ! Local variables integer :: myid, nproc, ierr real(dp) :: lmean, lstdev integer :: i1,i2,i3 integer(i8b) :: index integer :: n2x real(dp) :: mean, stdev call mpi_comm_rank(mpi_comm_world,myid,ierr) call mpi_comm_size(mpi_comm_world,nproc,ierr) n2x = 2*(nx/2+1) lmean=0 do i3=1,local_nz do i2=1,ny do i1=1,nx ! Real space, ignore padding zone index=int((i3-1)*ny+i2-1,8)*n2x+i1 #ifdef DOUB lmean = lmean+buffer(index) #else lmean = lmean+real(buffer(index),kind=dp) #endif enddo enddo enddo call mpi_allreduce(lmean,mean,1,mpi_double_precision,mpi_sum,mpi_comm_world,ierr) mean = mean/real(int(nx*ny,8)*nz,kind=dp) if (myid==0) then write(*,'(a,es15.5)') 'Mean value of the white noise box = ',mean print*,'Will be removed' endif lstdev=0 do i3=1,local_nz do i2=1,ny do i1=1,nx ! Real space, skip padding zone index=int((i3-1)*ny+i2-1,8)*n2x+i1 #ifdef DOUB buffer(index) = buffer(index)-mean lstdev = lstdev+buffer(index)**2 #else buffer(index) = buffer(index)-real(mean,kind=sp) lstdev = lstdev + real(buffer(index),kind=8)**2 #endif enddo enddo enddo call mpi_allreduce(lstdev,stdev,1,mpi_double_precision,mpi_sum,mpi_comm_world,ierr) stdev = stdev/real(int(nx*ny,8)*nz,kind=dp) stdev = sqrt(stdev) if (myid==0) then write(*,'(a,f15.5)') 'Standard deviation of the white noise box = ',stdev print*,'Will be factored out so that input stdev=1' endif #ifdef DOUB buffer = buffer/stdev #else buffer = buffer/real(stdev,kind=sp) #endif end subroutine mpnorm end module normalize mpgrafic-0.3.15/src/mppower.f90000066400000000000000000001323541314565475200162140ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! Copyright (C) 2008-2017 by Simon Prunet, Christophe Pichon et al ! ! prunet iap.fr ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !***************************************************************************** function p(ak,a) ! p evaluates the power spectrum at wavenumber ak for expansion factor a. ! It takes the nearest transfer function and scales it to a using the ! cdm transfer function. ! N.B. p is the 3-D spectral density and has units of 1/(ak*ak*ak). ! N.B. ak has units of 1/Mpc, _not_ h/Mpc. parameter (nkmax=1000,nt=11) double precision atab(nt) double precision y(nkmax,nt),dy(nkmax,nt),dk,akminl double precision y1(nkmax,nt),dy1(nkmax,nt) double precision y2(nkmax,nt),dy2(nkmax,nt) real dplus,f_baryon,omhh ! integer dummy common /cosmoparms/ omegam,omegav,h0 common /cosmoparms2/ omegab,omegahdm,degen_hdm common /pstuff/ atab,an,pnorm,icase,ilog,ntab common /splin2/ y,dy,y1,dy1,y2,dy2,dk,akminl,nk common /scaling/ a00,a10,scale common /extwarn/ iwarn1,iwarn2 if (ak.le.0.0) then p=0.0 return end if omega=omegam+omegav !************************************** ! Scale-free case. if (icase.eq.3) then if (a10.ne.a.or.a00.ne.1.0) then a10=a a00=1.0 scale=dplus(a,omegam,omegav)/dplus(1.0,omegam,omegav) end if p=pnorm*(scale**2)*(ak**an) return end if !************************************** ! Transfer function case. The transfer function T(k) is defined so ! that for initial curvature perturbations, phi(k,a=1)=T(k)*psi(k,a=0) ! where psi(k,a=0) has power spectrum pnorm*ak**(an-4) and phi(k,a=1) ! is related to delta (actually, Bardeens gauge-invariant variable ! epsilon_m) by the Poisson equation. For isocurvature initial ! conditions, linger uses the initial entropy perturbation rather than ! psi for normalization, but everything in this subroutine and in pini ! below follows without change. ! Two subcases: BBKS transfer function or tabulated transfer function ! from linger.dat. if (icase.eq.2) then !************************************** ! Use fit to matter transfer function. ! Hubble constant in units of 100 km/sec/Mpc. h=h0/100.0 !!omegab=0.039 omegahh=omegam*h*h !!*exp(-omegab*(1.+sqrt(h/0.5)/omegam)) q=ak/omegahh ! Transfer function for cold dark matter (from BBKS). a1=2.34*q a2=3.89*q a3=16.1*q a4=5.46*q a5=6.71*q t=1.0+a2+a3*a3+a4*a4*a4+a5*a5*a5*a5 t=log(1.0+a1)/a1/sqrt(sqrt(t)) ! Transfer function for cold dark matter (90%) plus baryons (10%) ! (from Holtzman). ! if (h.eq.0.5) then ! Commented out 10% baryons. ! a1=-1.323 ! a2=29.12 ! a3=50.29 ! a4=57.39 ! These are for 5% baryons. ! a1=-.9876 ! a2=26.27 ! a3=43.51 ! a4=50.45 ! else ! if (h.ne.1.0) write(*,*) 'Assuming H0=100!' ! Commented out 10% baryons. ! a1=-.8282 ! a2=9.184 ! a3=4.806 ! a4=4.666 ! a1=-.4306 ! a2=6.505 ! a3=4.040 ! a4=3.337 ! endif ! t=1.0/(1.0+a2*ak+sqrt(ak)*(a1+a3*ak)+a4*ak*ak) ! Transfer function for cold dark matter (from DEFW). ! a1=1.7*q ! a2=4.327*q ! a3=1.0*q ! t=1.0/(1.0+a1+a2*sqrt(a2)+a3*a3) ! Transfer function for hot dark matter (from BBKS). ! a1=2.6*q ! a2=1.6*q ! a3=4.0*q ! a4=0.92*q ! t=exp(-0.16*a1-0.5*a1*a1)/(1.0+a2+a3*sqrt(a3)+a4*a4) ! Apply transfer function to primordial power spectrum. ! Primordial spectrum of psi (or entropy, in the isocurvature case): p=pnorm*ak**(an-4.0) ! Apply transfer function to get spectrum of phi at a=1. p=p*t*t ! Convert to density fluctuation power spectrum. Note that k^2 is ! corrected for an open universe. Scale to a using linear theory. tpois=-(2.0d0/3.0d0)/omegam*((ak*2.99793e5/h0)**2 & & -4.*(omega-1.0)) if (a10.ne.a.or.a00.ne.1.0) then a10=a a00=1.0 scale=dplus(a,omegam,omegav)/dplus(1.0,omegam,omegav) end if p=p*tpois*tpois*scale**2 return !*************************************************************** !************EISENSTEIN AND HU POWER SPECTRUM***************** !*************************************************************** elseif (icase.eq.4) then !************************************** ! Use fit to matter transfer function. ! Hubble constant in units of 100 km/sec/Mpc. h=h0/100.0 ! Transfer function with Baryonic Wiggles omhh = omegam*h*h f_baryon=omegab/omegam t=TFmdm_onek_mpc(ak,omhh,f_baryon) ! Apply transfer function to primordial power spectrum. ! Primordial spectrum of psi (or entropy, in the isocurvature case): p=pnorm*ak**(an-4.0) ! Apply transfer function to get spectrum of phi at a=1. p=p*t*t ! Convert to density fluctuation power spectrum. Note that k^2 is ! corrected for an open universe. Scale to a using linear theory. tpois=-(2.0d0/3.0d0)/omegam*((ak*2.99793e5/h0)**2 & -4.*(omega-1.0)) if (a10.ne.a.or.a00.ne.1.0) then a10=a a00=1.0 scale=dplus(a,omegam,omegav)/dplus(1.0,omegam,omegav) end if p=p*tpois*tpois*scale**2 return ! else !************************************** ! Use tabulated matter transfer function. ! Find the first tabulated value exceeding a. itt=0 do it=1,ntab if (itt.eq.0.and.atab(it).gt.a) then itt=it end if end do if (itt.eq.0) itt=ntab if (itt.eq.1) itt=2 dt=log(a/atab(itt-1))/log(atab(itt)/atab(itt-1)) if (ilog.eq.0) then d=ak/dk i=d d=d-i if (i.lt.1) then if (iwarn1.eq.0) then iwarn1=1 write(*,*) 'Warning: extrapolating k below kmin of linger.dat' write(*,*) ' ak,akmin=',ak,dk end if t1=y(1,itt-1) t2=y(1,itt) else if (i.ge.nk) then if (iwarn2.eq.0) then iwarn2=1 write(*,*) 'Warning: extrapolating k beyond kmax of linger.dat' write(*,*) ' ak,akmax=',ak,nk*dk end if dltdlk=log(y(nk,itt-1)/y(nk-1,itt-1))/log(nk/(nk-1.0)) dlk=log(ak/(nk*dk)) t1=y(nk,itt-1)*exp(dltdlk*dlk) dltdlk=log(y(nk,itt)/y(nk-1,itt))/log(nk/(nk-1.0)) dlk=log(ak/(nk*dk)) t2=y(nk,itt)*exp(dltdlk*dlk) else t1=y(i,itt-1)+d*(dy(i,itt-1)+d*(3.0*(y(i+1,itt-1)-y(i,itt-1)) & & -2.0*dy(i,itt-1)-dy(i+1,itt-1)+d*(dy(i,itt-1)+dy(i+1,itt-1) & & +2.0*(y(i,itt-1)-y(i+1,itt-1))))) t2=y(i,itt)+d*(dy(i,itt)+d*(3.0*(y(i+1,itt)-y(i,itt)) & & -2.0*dy(i,itt)-dy(i+1,itt)+d*(dy(i,itt)+dy(i+1,itt) & & +2.0*(y(i,itt)-y(i+1,itt))))) end if else akl=log(ak) d=(akl-akminl)/dk+1 i=d d=d-i if (i.lt.1) then if (iwarn1.eq.0) then iwarn1=1 write(*,*) 'Warning: extrapolating k below kmin of linger.dat' write(*,*) ' ak,akmin=',ak,exp(akminl) end if t1=y(1,itt-1) t2=y(1,itt) else if (i.ge.nk) then if (iwarn2.eq.0) then iwarn2=1 write(*,*) 'Warning: extrapolating k beyond kmax of linger.dat' write(*,*) ' ak,akmax=',ak,exp(akminl+(nk-1)*dk) end if dltdi=log(y(nk,itt-1)/y(nk-1,itt-1)) t1=y(nk,itt-1)*exp(dltdi*(d+i-nk)) dltdi=log(y(nk,itt)/y(nk-1,itt)) t2=y(nk,itt)*exp(dltdi*(d+i-nk)) else t1=y(i,itt-1)+d*(dy(i,itt-1)+d*(3.0*(y(i+1,itt-1)-y(i,itt-1)) & & -2.0*dy(i,itt-1)-dy(i+1,itt-1)+d*(dy(i,itt-1)+dy(i+1,itt-1) & & +2.0*(y(i,itt-1)-y(i+1,itt-1))))) t2=y(i,itt)+d*(dy(i,itt)+d*(3.0*(y(i+1,itt)-y(i,itt)) & & -2.0*dy(i,itt)-dy(i+1,itt)+d*(dy(i,itt)+dy(i+1,itt) & & +2.0*(y(i,itt)-y(i+1,itt))))) end if end if t=(t1**(1.0-dt))*(t2**dt) ! Apply transfer function to primordial power spectrum. ! Primordial spectrum of psi (or entropy, in the isocurvature case): p=pnorm*ak**(an-4.0) ! Apply transfer function to get density fluctuation spectrum at a. p=p*t*t return end if ! end function p !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function pcdm(ak,a) ! p evaluates the cdm power spectrum at wavenumber ak for expansion factor a. ! It takes the nearest transfer function and scales it to a using the ! cdm transfer function. ! N.B. p is the 3-D spectral density and has units of 1/(ak*ak*ak). ! N.B. ak has units of 1/Mpc, _not_ h/Mpc. ! parameter (nkmax=1000,nt=11) double precision atab(nt) double precision y(nkmax,nt),dy(nkmax,nt),dk,akminl double precision y1(nkmax,nt),dy1(nkmax,nt) double precision y2(nkmax,nt),dy2(nkmax,nt) common /cosmoparms/ omegam,omegav,h0 common /pstuff/ atab,an,pnorm,icase,ilog,ntab common /splin2/ y1,dy1,y,dy,y2,dy2,dk,akminl,nk common /scaling/ a00,a10,scale common /extwarn/ iwarn1,iwarn2 if (ak.le.0.0) then pcdm=0.0 return end if !************************************** ! Scale-free case. if (icase.eq.3) then pcdm=p(ak,a) return else if (icase.eq.2.or.icase.eq.4) then !************************************** ! Transfer function case. The transfer function T(k) is defined so ! that for initial curvature perturbations, phi(k,a=1)=T(k)*psi(k,a=0) ! where psi(k,a=0) has power spectrum pnorm*ak**(an-4) and phi(k,a=1) ! is related to delta (actually, Bardeens gauge-invariant variable ! epsilon_m) by the Poisson equation. For isocurvature initial ! conditions, linger uses the initial entropy perturbation rather than ! psi for normalization, but everything in this subroutine and in pini ! below follows without change. ! Two subcases: BBKS transfer function or tabulated transfer function ! from linger.dat. !************************************** pcdm=p(ak,a) return end if ! Use tabulated matter transfer function. ! First the first tabulated value exceeding a. itt=0 do it=1,ntab if (itt.eq.0.and.atab(it).gt.a) then itt=it end if end do if (itt.eq.0) itt=ntab if (itt.eq.1) itt=2 dt=log(a/atab(itt-1))/log(atab(itt)/atab(itt-1)) if (ilog.eq.0) then d=ak/dk i=d d=d-i if (i.lt.1) then if (iwarn1.eq.0) then iwarn1=1 write(*,*) 'Warning: extrapolating k below kmin of linger.dat' write(*,*) ' ak,akmin=',ak,dk end if t1=y(1,itt-1) t2=y(1,itt) else if (i.ge.nk) then if (iwarn2.eq.0) then iwarn2=1 write(*,*) 'Warning: extrapolating k beyond kmax of linger.dat' write(*,*) ' ak,akmax=',ak,nk*dk end if dltdlk=log(y(nk,itt-1)/y(nk-1,itt-1))/log(nk/(nk-1.0)) dlk=log(ak/(nk*dk)) t1=y(nk,itt-1)*exp(dltdlk*dlk) dltdlk=log(y(nk,itt)/y(nk-1,itt))/log(nk/(nk-1.0)) dlk=log(ak/(nk*dk)) t2=y(nk,itt)*exp(dltdlk*dlk) else t1=y(i,itt-1)+d*(dy(i,itt-1)+d*(3.0*(y(i+1,itt-1)-y(i,itt-1)) & & -2.0*dy(i,itt-1)-dy(i+1,itt-1)+d*(dy(i,itt-1)+dy(i+1,itt-1) & & +2.0*(y(i,itt-1)-y(i+1,itt-1))))) t2=y(i,itt)+d*(dy(i,itt)+d*(3.0*(y(i+1,itt)-y(i,itt)) & & -2.0*dy(i,itt)-dy(i+1,itt)+d*(dy(i,itt)+dy(i+1,itt) & & +2.0*(y(i,itt)-y(i+1,itt))))) end if else akl=log(ak) d=(akl-akminl)/dk+1 i=d d=d-i if (i.lt.1) then if (iwarn1.eq.0) then iwarn1=1 write(*,*) 'Warning: extrapolating k below kmin of linger.dat' write(*,*) ' ak,akmin=',ak,exp(akminl) end if t1=y(1,itt-1) t2=y(1,itt) else if (i.ge.nk) then if (iwarn2.eq.0) then iwarn2=1 write(*,*) 'Warning: extrapolating k beyond kmax of linger.dat' write(*,*) ' ak,akmax=',ak,exp(akminl+(nk-1)*dk) end if dltdi=log(y(nk,itt-1)/y(nk-1,itt-1)) t1=y(nk,itt-1)*exp(dltdi*(d+i-nk)) dltdi=log(y(nk,itt)/y(nk-1,itt)) t2=y(nk,itt)*exp(dltdi*(d+i-nk)) else t1=y(i,itt-1)+d*(dy(i,itt-1)+d*(3.0*(y(i+1,itt-1)-y(i,itt-1)) & & -2.0*dy(i,itt-1)-dy(i+1,itt-1)+d*(dy(i,itt-1)+dy(i+1,itt-1) & & +2.0*(y(i,itt-1)-y(i+1,itt-1))))) t2=y(i,itt)+d*(dy(i,itt)+d*(3.0*(y(i+1,itt)-y(i,itt)) & & -2.0*dy(i,itt)-dy(i+1,itt)+d*(dy(i,itt)+dy(i+1,itt) & & +2.0*(y(i,itt)-y(i+1,itt))))) end if end if t=(t1**(1.0-dt))*(t2**dt) ! Apply transfer function to primordial power spectrum. ! Primordial spectrum of psi (or entropy, in the isocurvature case): pcdm=pnorm*ak**(an-4.0) ! Apply transfer function to get density fluctuation spectrum at a. pcdm=pcdm*t*t return end function pcdm !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function pbar(ak,a) ! p evaluates the bar power spectrum at wavenumber ak for expansion factor a=1. ! N.B. p is the 3-D spectral density and has units of 1/(ak*ak*ak). ! N.B. ak has units of 1/Mpc, _not_ h/Mpc. parameter (nkmax=1000,nt=11) double precision atab(nt) double precision y(nkmax,nt),dy(nkmax,nt),dk,akminl double precision y1(nkmax,nt),dy1(nkmax,nt) double precision y2(nkmax,nt),dy2(nkmax,nt) common /cosmoparms/ omegam,omegav,h0 common /pstuff/ atab,an,pnorm,icase,ilog,ntab common /splin2/ y1,dy1,y2,dy2,y,dy,dk,akminl,nk common /scaling/ a00,a10,scale common /extwarn/ iwarn1,iwarn2 if (ak.le.0.0) then pbar=0.0 return end if !************************************** ! Scale-free case. if (icase.eq.3) then pbar=p(ak,a) return else if (icase.eq.2.or.icase.eq.4) then !************************************** ! Transfer function case. The transfer function T(k) is defined so ! that for initial curvature perturbations, phi(k,a=1)=T(k)*psi(k,a=0) ! where psi(k,a=0) has power spectrum pnorm*ak**(an-4) and phi(k,a=1) ! is related to delta (actually, Bardeens gauge-invariant variable ! epsilon_m) by the Poisson equation. For isocurvature initial ! conditions, linger uses the initial entropy perturbation rather than ! psi for normalization, but everything in this subroutine and in pini ! below follows without change. ! Two subcases: BBKS transfer function or tabulated transfer function ! from linger.dat. !************************************** pbar=p(ak,a) return end if ! Use tabulated matter transfer function. ! First the first tabulated value exceeding a. itt=0 do it=1,ntab if (itt.eq.0.and.atab(it).gt.a) then itt=it end if end do if (itt.eq.0) itt=ntab if (itt.eq.1) itt=2 dt=log(a/atab(itt-1))/log(atab(itt)/atab(itt-1)) if (ilog.eq.0) then d=ak/dk i=d d=d-i if (i.lt.1) then if (iwarn1.eq.0) then iwarn1=1 write(*,*) 'Warning: extrapolating k below kmin of linger.dat' write(*,*) ' ak,akmin=',ak,dk end if t1=y(1,itt-1) t2=y(1,itt) else if (i.ge.nk) then if (iwarn2.eq.0) then iwarn2=1 write(*,*) 'Warning: extrapolating k beyond kmax of linger.dat' write(*,*) ' ak,akmax=',ak,nk*dk end if dltdlk=log(y(nk,itt-1)/y(nk-1,itt-1))/log(nk/(nk-1.0)) dlk=log(ak/(nk*dk)) t1=y(nk,itt-1)*exp(dltdlk*dlk) dltdlk=log(y(nk,itt)/y(nk-1,itt))/log(nk/(nk-1.0)) dlk=log(ak/(nk*dk)) t2=y(nk,itt)*exp(dltdlk*dlk) else t1=y(i,itt-1)+d*(dy(i,itt-1)+d*(3.0*(y(i+1,itt-1)-y(i,itt-1)) & & -2.0*dy(i,itt-1)-dy(i+1,itt-1)+d*(dy(i,itt-1)+dy(i+1,itt-1) & & +2.0*(y(i,itt-1)-y(i+1,itt-1))))) t2=y(i,itt)+d*(dy(i,itt)+d*(3.0*(y(i+1,itt)-y(i,itt)) & & -2.0*dy(i,itt)-dy(i+1,itt)+d*(dy(i,itt)+dy(i+1,itt) & & +2.0*(y(i,itt)-y(i+1,itt))))) end if else akl=log(ak) d=(akl-akminl)/dk+1 i=d d=d-i if (i.lt.1) then if (iwarn1.eq.0) then iwarn1=1 write(*,*) 'Warning: extrapolating k below kmin of linger.dat' write(*,*) ' ak,akmin=',ak,exp(akminl) end if t1=y(1,itt-1) t2=y(1,itt) else if (i.ge.nk) then if (iwarn2.eq.0) then iwarn2=1 write(*,*) 'Warning: extrapolating k beyond kmax of linger.dat' write(*,*) ' ak,akmax=',ak,exp(akminl+(nk-1)*dk) end if dltdi=log(y(nk,itt-1)/y(nk-1,itt-1)) t1=y(nk,itt-1)*exp(dltdi*(d+i-nk)) dltdi=log(y(nk,itt)/y(nk-1,itt)) t2=y(nk,itt)*exp(dltdi*(d+i-nk)) else t1=y(i,itt-1)+d*(dy(i,itt-1)+d*(3.0*(y(i+1,itt-1)-y(i,itt-1)) & & -2.0*dy(i,itt-1)-dy(i+1,itt-1)+d*(dy(i,itt-1)+dy(i+1,itt-1) & & +2.0*(y(i,itt-1)-y(i+1,itt-1))))) t2=y(i,itt)+d*(dy(i,itt)+d*(3.0*(y(i+1,itt)-y(i,itt)) & & -2.0*dy(i,itt)-dy(i+1,itt)+d*(dy(i,itt)+dy(i+1,itt) & & +2.0*(y(i,itt)-y(i+1,itt))))) end if end if t=(t1**(1.0-dt))*(t2**dt) ! Apply transfer function to primordial power spectrum. ! Primordial spectrum of psi (or entropy, in the isocurvature case): pbar=pnorm*ak**(an-4.0) ! Apply transfer function to get density fluctuation spectrum at a. pbar=pbar*t*t return end function pbar !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc subroutine pini #ifdef HAVE_USE_MPI_F08 use mpi_f08 #endif ! Pini initializes the power spectrum. !parameter (pi=3.1415926535898d0) double precision, parameter :: pi=3.1415926535898d0 double precision, parameter :: fourpi=4.0d0*pi !, twopi=2.0d0*pi character*128 filename parameter (nkmax=1000,nt=11) double precision atab(nt) double precision deltat2(0:nkmax),ddeltat2(0:nkmax) double precision tmat(nkmax,nt),dtmat(nkmax,nt) double precision tcdm(nkmax,nt),dtcdm(nkmax,nt) double precision tbar(nkmax,nt),dtbar(nkmax,nt) double precision rombin,dphid,tcon0,arec,ak,om,ov,ok,uj2 double precision dc2,dc2l,dk,akmax,akminl,akmaxl,dk1,akmin1 double precision dsig8,grhom,grhog,grhor,grho,adotoa real tcon,dplus real tcmb, anorml integer myid,ierr common /cosmoparms/ omegam,omegav,h0 common /cosmoparms2/ omegab,omegahdm,degen_hdm common /pstuff/ atab,an,pnorm,icase,ilog,ntab common /omegas/ om,ov,ok common /phint/ tcon0,ak common /splin1/ deltat2,ddeltat2,dk,akminl common /splin2/ tmat,dtmat,tcdm,dtcdm,tbar,dtbar,dk1,akmin1,nk1 common /scaling/ a00,a10,scale common /extwarn/ iwarn1,iwarn2 external dphid,dc2,dc2l,dsig8 #ifndef HAVE_USE_MPI_F08 include 'mpif.h' #endif call mpi_comm_rank(mpi_comm_world,myid,ierr) iwarn1=0 iwarn2=0 a00=0.0 a10=0.0 scale=1.0 if (myid==0) then write(*,*) 'Select type of initial power spectrum', & & ' (matter transfer function):' write(*,*) ' 1 for T(k) from linger.dat' write(*,*) ' 2 for T(k) from approx. analytical fit (BBKS)' write(*,*) ' 3 for T(k)=1 (scale-free)' ! TODO: See uninitialised warning below and fix. write(*,*) ' 4 for T(k) from approx. analytical fit (E&Hu)' write(*,*) 'Enter case (1,2,3 or 4) now:' read(*,*) icase print*, icase endif call mpi_bcast(icase,1,mpi_integer,0,mpi_comm_world,ierr) if (icase.eq.1) then if (myid==0) then write(*,*) 'Enter linger.dat filename' read(*,'(a)') filename open(11,file=filename,status='old') rewind 11 read(11,*) omegab,omegac,omegav,omegan read(11,*) h0,tcmb,yhe,nnur,nnunr,initfl write(*,*) 'Omegab,c,v,n=',omegab,omegac,omegav,omegan write(*,*) 'H0,Tcmb,Y,Nnur,Nnunr,initfl=',h0,tcmb,yhe,nnur, & & nnunr,initfl endif call mpi_bcast(omegab,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(omegac,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(omegav,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(omegan,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(h0,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(tcmb,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(nnur,1,mpi_integer,0,mpi_comm_world,ierr) call mpi_bcast(initfl,1,mpi_integer,0,mpi_comm_world,ierr) omegam=omegab+omegac+omegan om=omegam ov=omegav ok=1.0d0-om-ov ! Energy density constants. grhom=3.3379d-11*h0*h0 grhog=1.4952d-13*tcmb**4 grhor=3.3957d-14*tcmb**4 ! Tcmb in micro-K. tcmb=tcmb*1.e6 else if (icase.eq.2.or.icase.eq.3.or.icase.eq.4) then tcmb=2.726e6 if (h0.eq.0) then ! These may already have been set through common. if (myid==0) then write(*,*) 'Enter Omega_m, Omega_v, H0 (km/s/Mpc,', & & ' set H0=1 for scale-free case)' read(*,*) omegam,omegav,h0 write(*,'(3f15.5)') omegam,omegav,h0 endif call mpi_bcast(omegam,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(omegav,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(h0,1,mpi_real,0,mpi_comm_world,ierr) if(icase.eq.4) then if (myid==0) then write(*,*) 'Enter Omega_b' read(*,*) omegab write(*,'(f15.5)') omegab end if call mpi_bcast(omegab,1,mpi_real,0,mpi_comm_world,ierr) endif end if if (myid==0) & write(*,'(a,a,3f15.5)')' Initializing power spectrum for Omega_m, ', & & 'Omega_v, H0=',omegam,omegav,h0 om=omegam ov=omegav ok=1.0d0-om-ov ntab=1 atab(1)=1.0 else if (myid==0) write(*,*) 'Illegal choice. Aborting' call mpi_finalize(ierr) stop end if ! if (myid==0) then write(*,*) 'Enter long-wave spectral index n (scale-invariant', & & ' is n=1)' read(*,*) an write(*,'(f15.5)') an endif call mpi_bcast(an,1,mpi_integer,0,mpi_comm_world,ierr) ! an=1 ! if (myid==0) then write(*,*) 'Enter desired normalization at a=1:' if (icase.eq.1.or.icase.eq.2.or.icase.eq.4) then write(*,*) ' Qrms-ps/micro-K (if > 0) or -sigma_8 (if < 0) = ?' else write(*,*) ' k^3*P(k) at k=pi = ?' end if read(*,*) anorml endif call mpi_bcast(anorml,1,mpi_real,0,mpi_comm_world,ierr) ! !************************************** ! Scale-free case. pnorm is the power at the Nyquist frequency for ! a=1 assuming unit transfer function and dx=1. if (icase.eq.3) then akmax=pi pnorm=anorml/akmax**(3.0+an) return end if !************************************** ! Transfer function case. Normalize by CMB quadrupole. ! Two subcases: BBKS transfer function or linger.dat. ! First, get l=2 CMB transfer function Delta_2(k). !************************************** if (icase.eq.2.or.icase.eq.4) then ! Compute Delta_2(k) using Sachs-Wolfe approximation (including phidot). nk=31 akmin=1.e-5 akmax=1.e-2 ilog=1 dk=log(akmax/akmin)/(nk-1) tcon0=tcon(1.0) arec=1.0d0/1200.0d0 f0=dplus(1.0,omegam,omegav) frec=dplus(real(arec),omegam,omegav)/arec if (myid==0) then write(*,*) 'Computing Delta_2(k) using Sachs-Wolfe approxmation' write(*,*) 'This may take several minutes.' endif do ik=1,nk ak=akmin*exp((ik-1)*dk) phidotint=rombin(dphid,arec,1.0d0,1.0d-4) ! Assume isentropic initial fluctuations. If they are instead ! entropy, replace uj2/3 by uj2*2. deltat2(ik)=(frec*uj2(ak*2.99793d5/h0,tcon0,ok)/3.0d0 & & +2.0d0*phidotint)/f0 ! write(*,'(a4,i4,a2,i4)') 'ik =',ik,' /',nk end do else !************************************** ! Use linger.dat for Delta_2(k) and matter (phi) transfer function. ! N.B. We are assuming that there are exactly nt timesteps saved for each k. ntab=nt do i=1,nkmax do it=1,nt if (myid==0) then read(11,*) ik,ak,a1,tcon1,psi,phi,deltac, & & deltab,deltag,deltar,deltan,thetac,thetab,thetag,thetar,thetan, & & shearg,shearr,shearn,econ endif ! Propagate to other cpus call mpi_bcast(ik,1,mpi_integer,0,mpi_comm_world,ierr) call mpi_bcast(ak,1,mpi_real8,0,mpi_comm_world,ierr) call mpi_bcast(a1,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(phi,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(deltac,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(deltab,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(thetac,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(thetab,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(shearg,1,mpi_real,0,mpi_comm_world,ierr) if (ik.ne.i) then if (myid==0) write(*,*) & & 'linger.dat is not sorted properly or has ntab.ne.nt!' ! write(*,*) 'sort on first column (sort -n linger.dat)', ! 2 ' and rerun' call mpi_finalize(ierr) stop end if if (i.eq.1) then akmin=ak atab(it)=a1 end if ! Use last timestep (probably a=1) to get delta_T/T. if (it.eq.nt) deltat2(ik)=shearg/2.0d0 ! Get the matter (phi) transfer function. ! TODO: WARNING: grhom, grhog, grhor uninitialised if icase .eq. 3 grho=grhom*(om/a1+ok+ov*a1*a1)+(grhog+nnur*grhor)/(a1*a1) adotoa=sqrt(grho/3.0d0) if (initfl.gt.0) then ! Synchronous gauge. Gauge transformation is given by phi=eta+etatophi. ! What we read in as phi actually is eta. What we read in as thetac ! actually is etatophi. tmat(ik,it)=phi+thetac ! n.b. thetac=0 in our synch. gauge. tcdm(ik,it)=deltac tbar(ik,it)=deltab+3.0d0*adotoa/(ak*ak)*thetab else ! Conformal Newtonian gauge. tmat(ik,it)=phi tcdm(ik,it)=deltac+3.0d0*adotoa/(ak*ak)*thetac tbar(ik,it)=deltab+3.0d0*adotoa/(ak*ak)*thetab end if ! Convert from potential to density transfer function. Note that k^2 ! is corrected for an open universe. tpois=-(2.0d0/3.0d0)/om*((ak*2.99793e5/h0)**2+4.0d0*ok) tmat(ik,it)=a1*tpois*tmat(ik,it) ! Correct the photon quadrupole moment to a=1 using the Sachs-Wolfe ! formula (if necessary). if (it.eq.nt.and.abs(a1-1.0).gt.0.01) then if (ik.eq.1) then arec=a1 f0=dplus(1.0,omegam,omegav) end if phidotint=rombin(dphid,arec,1.0d0,1.0d-4) deltat2(ik)=deltat2(ik)+2.0d0*phidotint/f0*tmat(ik,it) end if end do end do if (myid==0) close(11) nk=ik akmax=ak if (abs(akmax/nk-akmin).le.1.0e-6) then ! Linear steps in k. ilog=0 dk=akmax/nk else ! Logarithmic steps in k. ilog=1 dk=log(akmax/akmin)/(nk-1) end if end if dk1=dk nk1=nk !************************************** ! Now integrate anisotropy to normalize by Qrms-ps. call splini if (ilog.eq.0) then deltat2(0)=0.0d0 call splder(deltat2,ddeltat2,nk+1) qq=5.0d0*fourpi*rombin(dc2,0.0d0,akmax,1.0d-7) else call splder(deltat2(1),ddeltat2(1),nk) akminl=log(akmin) akmin1=akminl akmaxl=log(akmax) qq=5.0d0*fourpi*rombin(dc2l,log(1.0d-6),akmaxl,1.0d-7) end if !************************************** ! pnorm is the primeval amplitude defined by P_psi=pnorm*ak**(an-4) ! in the isentropic case. For isocurvature initial conditions, ! replace P_psi by the power spectrum of primeval entropy perturbations. akmax=h0/8.0 do it=1,ntab call splder(tmat(1,it),dtmat(1,it),nk) call splder(tcdm(1,it),dtcdm(1,it),nk) call splder(tbar(1,it),dtbar(1,it),nk) end do if (anorml.gt.0.0) then !************************************** ! anorml is Qrms-ps in micro-K. Compute corresponding sigma8. pnorm=(anorml/tcmb)**2/qq ! Now integrate density fluctuation to get sigma8. sig0=fourpi*rombin(dsig8,0.0d0,akmax,1.0d-7) sigma8=sqrt(sig0) if (myid==0) write(*,*) 'Linear sigma8=',sigma8 else !************************************** ! anorml is -sigma8, the rms linear density fluctuation in a sphere of ! radius 8/h Mpc. Compute corresponding Qrms-ps. sigma8=-anorml pnorm=1.0 sig0=fourpi*rombin(dsig8,0.0d0,akmax,1.0d-7) pnorm=sigma8**2/sig0 qrmsps=tcmb*sqrt(pnorm*qq) if (myid==0) write(*,'(a,f15.4)') 'Qrms-ps/micro-K=',qrmsps end if if (myid==0) then write(*,*) write(*,*) 'I can write the power spectrum of delta_rho/rho', & & ' to disk (power.dat).' write(*,*) 'If you would like this, please enter kmin and', & & ' kmax (1/Mpc)' write(*,*) 'Enter 0,0 if you don''t want the power spectrum', & & ' written to a file' read(*,*) ak1,ak2 write(*,'(2es15.5)') ak1,ak2 endif call mpi_bcast(ak1,1,mpi_real,0,mpi_comm_world,ierr) call mpi_bcast(ak2,1,mpi_real,0,mpi_comm_world,ierr) if (ak1.le.0.0.or.ak2.le.0.0) return nkplot=201 dlkp=log(ak2/ak1)/(nkplot-1) if (myid==0) then open(11,file='power.dat',form='formatted',status='unknown') rewind 11 write(11,*) an,anorml do i=1,nkplot ak0=ak1*exp((i-1)*dlkp) write(11,*) ak0/(h0/100.0),p(ak0,1.0)*(h0/100.0)**3, & & fourpi*ak0*ak0*ak0*p(ak0,1.0) end do close(11) endif return end subroutine pini !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function dc2(ak) implicit double precision (a-h,o-z) parameter (nkmax=1000,nt=11) double precision y(0:nkmax),dy(0:nkmax),atab(nt) common /splin1/ y,dy,dk,akminl real an,pnorm common /pstuff/ atab,an,pnorm,icase,ilog,ntab if (ak.eq.0.0d0) then dc2=0.0d0 return end if d=ak/dk i=d d=d-i delt2=y(i)+d*(dy(i)+d*(3.0*(y(i+1)-y(i))-2.0*dy(i) & & -dy(i+1)+d*(dy(i)+dy(i+1)+2.0*(y(i)-y(i+1))))) dc2=delt2*delt2*ak**(an-2.0d0) return end function dc2 !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function dc2l(akl) implicit double precision (a-h,o-z) parameter (nkmax=1000,nt=11) double precision y(0:nkmax),dy(0:nkmax),atab(nt) common /splin1/ y,dy,dkl,akminl real an,pnorm common /pstuff/ atab,an,pnorm,icase,ilog,ntab ak=exp(akl) d=(akl-akminl)/dkl+1 i=d d=d-i if (i.lt.1) then delt2=y(1)*(ak/exp(akminl))**2 else delt2=y(i)+d*(dy(i)+d*(3.0*(y(i+1)-y(i))-2.0*dy(i) & & -dy(i+1)+d*(dy(i)+dy(i+1)+2.0*(y(i)-y(i+1))))) end if dc2l=delt2*delt2*ak**(an-1.0d0) return end function dc2l !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function dphid(a) implicit double precision (a-h,o-z) real tcon,dplus,fomega,omegam,omegav,h0 common /cosmoparms/ omegam,omegav,h0 common /phint/ tcon0,ak ok=1.0d0-omegam-omegav r=tcon0-tcon(real(a)) dphid=dplus(real(a),omegam,omegav)/(a*a) & & *(fomega(real(a),omegam,omegav)-1.0d0) & & *uj2(ak*2.99793d5/h0,r,ok) return end function dphid !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function tcon(a) ! Evaluate H0*conformal time for FLRW cosmology. ! Assume Omegas passed in common to dtconda. real tcon,a double precision b,rombint,dtconda external dtconda b=sqrt(a) tcon=rombint(dtconda,0.0d0,b,1.0d-8) return end function tcon !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function dtconda(b) ! Omegam := Omega today (a=1) in matter. ! Omegav := Omega today (a=1) in vacuum energy. ! Omegak := Omega today (a=1) in curvature, Omegak := 1-Omegam-Omegav. implicit double precision (a-h,o-z) common /omegas/ omegam,omegav,omegak a=b*b etab=sqrt(omegam+omegav*a*a*a+omegak*a) dtconda=2.0d0/etab return end function dtconda !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function dsig8(ak) ! This function calculates the integrand for the normalization of the ! power spectrum with Delta = 1 at r = 8 Mpc/h. double precision dsig8,ak,x,w common /cosmoparms/ omegam,omegav,h0 if (ak.le.0.0d0) then dsig8=0.0d0 return end if ! Window function for spherical tophat of radius 8 Mpc/h. x=ak*800.0/h0 w=3.0*(sin(x)-x*cos(x))/(x*x*x) dsig8=ak*ak*p(real(ak),1.0)*w*w return end function dsig8 !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function uj2(ak,chi,omegak) ! Evaluate the ultra spherical Bessel function j_2(k,chi,omegak), the ! generalization of spherical Bessel function to a constant curvature ! 3-space. Must have ak in units of H0/c and chi in units of c/H0. ! This routine assumes an open or flat universe with omegak >= 0. ! While it is easy to evalulate uj2 for a closed universe, this also ! requires replacing integrals over k by sums over k. ! implicit double precision (a-h,o-z) if (omegak.lt.-1.0d-6) then write(*,*) 'Closed universe prohibited in uj2!' write(*,*) 'omegak=',omegak stop else if (omegak.le.1.0d-6) then uj2=aj2(ak*chi) else rc=1.0d0/sqrt(omegak) uj2=bj2(ak*rc,chi/rc) end if return end function uj2 !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc ! Evaluate the spherical bessel function j_2(x). function aj2(x) implicit double precision (a-h,o-z) parameter (tol=1.0d-16) xa=abs(x) xx=x*x if (xa.lt.1.0d-3) then aj0=1.0d0-xx/6.0d0*(1.0d0-xx/20.0d0*(1.0d0-xx/42.0d0 & & *(1.0d0-xx/72.0d0))) aj1=(x/3.0d0)*(1.0d0-xx/10.0d0*(1.0d0-xx/28.0d0 & & *(1.0d0-xx/54.0d0))) else aj0=sin(x)/x aj1=(sin(x)-x*cos(x))/xx end if ! Use power series expansion for small argument. x2=-0.25d0*xx if (-x2.lt.0.5d0.or.xa.lt.1.5d0) then fact=xx/15.0d0 sum=1.0d0 term=1.0d0 n=0 7 n=n+1 term=term*x2/(n*(n+2.5d0)) sum=sum+term if (n.lt.10.or.abs(term).gt.tol) go to 7 if (abs(sum).lt.1.0d-6) then write(*,*) 'aj2** x,sum=',x,sum go to 9 end if aj2=fact*sum return end if ! Use recurrence relation to get aj2. 9 continue aj2=3.0d0*aj1/x-aj0 return end function aj2 !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc ! Evaluate the ultra spherical bessel function j_2(k,chi). function bj2(ak,chi) ! This is the generalization of the spherical Bessel function to a pseudo ! 3-sphere (a 3-space of constant negative curvature). Must have the radial ! wavenumber k and coordinate chi be in units of the curvature distance, ! sqrt(-1/K). ! implicit double precision (a-h,o-z) parameter (tol=1.0d-10) if (ak.lt.0.d0.or.chi.lt.0.d0) then write(*,*) 'Negative ak, chi prohibited in bj2!' stop end if akk=ak*ak ak1=sqrt(1.0d0+akk) if (chi.gt.100.0d0) then write(*,*) 'r/Rcurv is too large in bj2' stop end if e=exp(chi) ei=1.0d0/e ch=0.5d0*(e+ei) sh=0.5d0*(e-ei) ch2=0.5d0*(1.0d0+ch) x2=0.5d0*(1.0d0-ch) chi2=chi*chi if (sh.lt.1.0d-3) then sh=chi*(1.0d0+chi2/6.0d0*(1.0d0+chi2/20.0d0*(1.0d0+chi2/42.0d0 & & *(1.0d0+chi2/72.0d0)))) x2=-0.25d0*chi2*(1.0d0+chi2/12.0d0*(1.0d0+chi2/30.0d0*(1.0d0+ & & chi2/56.0d0*(1.0d0+chi2/90.0d0)))) end if if (sh.ne.0.0d0) cth=ch/sh cn=cos(ak*chi) sn=sin(ak*chi) if (sh.eq.0.0d0) then uj0=1.0d0 ujl1=0.0d0 else if (ak.eq.0.0d0) then uj0=chi/sh uj1=(chi*ch-sh)/(sh*sh) else uj0=sn/(ak*sh) uj1=(sn*ch-ak*sh*cn)/(ak*ak1*sh*sh) end if if (-x2.lt.0.5d0.and.ak*chi.lt.2) then ! Use hypergeometric series expansion for small argument. fact=sh*ak1/(3.0d0*ch2*sqrt(ch2)) ak2=sqrt(akk+4.0d0) fact=fact*sh*ak2/(5.0d0*ch2) sum=1.0d0 term=1.0d0 n=0 10 n=n+1 hn=n-0.5d0 term=term*x2*(akk+hn*hn)/(n*(hn+3)) sum=sum+term if (n.lt.5.or.abs(term).gt.tol) go to 10 uj2=fact*sum else ! Use recurrence relation to get uj2. if (sh.eq.0.0d0) then uj2=0.0d0 else ak2=sqrt(akk+4.0d0) uj2=(3.0d0*cth*uj1-ak1*uj0)/ak2 end if end if bj2=uj2 return end function bj2 !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function rombin(f,a,b,tol) ! Rombint returns the integral from a to b of f(x)dx using Romberg integration. ! The method converges provided that f(x) is continuous in (a,b). The function ! f must be double precision and must be declared external in the calling ! routine. tol indicates the desired relative accuracy in the integral. parameter (MAXITER=20,MAXJ=5) implicit double precision (a-h,o-z) dimension g(MAXJ+1) external f h=0.5d0*(b-a) gmax=h*(f(a)+f(b)) g(1)=gmax nint=1 error=1.0d20 i=0 10 i=i+1 if (i.gt.MAXITER.or.(i.gt.9.and.abs(error).lt.tol)) & & go to 40 ! Calculate next trapezoidal rule approximation to integral. g0=0.0d0 do 20 k=1,nint g0=g0+f(a+(k+k-1)*h) 20 continue g0=0.5d0*g(1)+h*g0 h=0.5d0*h nint=nint+nint jmax=min(i,MAXJ) fourj=1.0d0 do 30 j=1,jmax ! Use Richardson extrapolation. fourj=4.0d0*fourj g1=g0+(g0-g(j))/(fourj-1.0d0) g(j)=g0 g0=g1 30 continue if (abs(g0).gt.tol) then error=1.0d0-gmax/g0 else error=gmax end if gmax=g0 g(jmax+1)=g0 go to 10 40 rombin=g0 if (i.gt.MAXITER.and.abs(error).gt.tol) & & write(*,*) 'Rombint failed to converge; integral, error=', & & rombin,error return end function rombin !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc ! HERE STARTS THE $&%*§è BARYONIC PHYSICS !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc real function TFmdm_onek_mpc(k,omhh,f_baryon) ! Calculate transfer function ! ! Input: ! k -- wavenumber in Mpc^{-1} ! omhh -- The density of CDM and baryons, in units of critical dens, ! multiplied by the square of the Hubble constant, in units ! of 100 km/s/Mpc */ ! f_baryon -- The fraction of baryons to CDM */ ! ! Output: ! tf_full -- The full fitting formula, eq. (16), for the matter ! transfer function. ! tf_baryon -- The baryonic piece of the full fitting formula, eq. 21. ! tf_cdm -- The CDM piece of the full fitting formula, eq. 17. ! ! Tcmb -- The temperature of the CMB in Kelvin, 2.728(4) is COBE and is ! the default reached by inputing Tcmb=0 -- reset on output. */ ! ! theta_cmb, /* Tcmb in units of 2.7 K */ ! z_equality, /* Redshift of matter-radiation equality, really 1+z */ ! k_equality, /* Scale of equality, in Mpc^-1 */ ! z_drag, /* Redshift of drag epoch */ ! R_drag, /* Photon-baryon ratio at drag epoch */ ! R_equality, /* Photon-baryon ratio at equality epoch */ ! sound_horizon, /* Sound horizon at drag epoch, in Mpc */ ! k_silk, /* Silk damping scale, in Mpc^-1 */ ! alpha_c, /* CDM suppression */ ! beta_c, /* CDM log shift */ ! alpha_b, /* Baryon suppression */ ! beta_b, /* Baryon envelope shift */ implicit none real y,omhh,obhh,Tcmb,s_tilde,TF_pressureless real k,tf_full,tf_baryon,tf_cdm,q,ks real theta_cmb,z_equality,k_equality,z_drag,R_drag,R_equality, & & sound_horizon,k_silk,alpha_c,beta_c,alpha_b,beta_b, & & f_baryon,beta_node if (f_baryon.le.0) f_baryon=1.e-5 ! Ugly hack to initialize Tcmb... Tcmb=0.0 if (Tcmb.le.0) Tcmb=2.728 if (omhh.le.0.0) then write(*,*) 'TFset_parameters(): Illegal input' stop end if ! Auxiliary variables obhh = omhh*f_baryon theta_cmb = Tcmb/2.7 ! Main variables z_equality = 2.50e4*omhh*theta_cmb**(-4.) - 1.D0 k_equality = 0.0746*omhh*theta_cmb**(-2.) z_drag = 0.313*omhh**(-0.419)*(1.+0.607*omhh**(0.674)) z_drag = 1e0 + z_drag*obhh**(0.238*omhh**(0.223)) z_drag = 1291e0 * omhh**(0.251)/ & & (1e0 + 0.659*omhh**(0.828)) * z_drag R_drag = 31.5*obhh*theta_cmb**(-4.)*1000e0/(1e0 + z_drag) R_equality = 31.5*obhh*theta_cmb**(-4.) & & *1000e0/(1e0 + z_equality) sound_horizon = 2./3./k_equality*sqrt(6./R_equality)* & & log(( sqrt(1.+R_drag)+sqrt(R_drag+R_equality) ) & & /(1.+sqrt(R_equality))) k_silk = 1.6*obhh**(0.52)*omhh**(0.73)* & & (1e0 + (10.4*omhh)**(-0.95)) alpha_c = ((46.9*omhh)**(0.670)*(1e0+(32.1*omhh)**(-0.532))) alpha_c = alpha_c**(-f_baryon) alpha_c = alpha_c*((12.0*omhh)**(0.424)*(1e0 + & & (45.0*omhh)**(-0.582)))**(-f_baryon**3.) beta_c = 0.944/(1+(458.*omhh)**(-0.708)) beta_c = 1.+beta_c*((1.-f_baryon)**((0.395*omhh)**(-0.0266)) & & - 1e0) beta_c = 1./beta_c y = (1e0+z_equality)/(1e0+z_drag) alpha_b = y*(-6.*sqrt(1.+y)+(2.+3.*y)*log((sqrt(1.+y)+1.) & & /(sqrt(1.+y)-1.))) alpha_b = 2.07*k_equality*sound_horizon* & & (1.+R_drag)**(-0.75)*alpha_b beta_b = 0.5+f_baryon+(3.-2.*f_baryon)* & & sqrt((17.2*omhh)**2.+1e0) beta_node = 8.41*omhh**(0.435) if (k.le.0) then write(*,*) 'TFtransfer_function(): Illegal k' stop end if ! Auxiliary Variables q = k/13.41/k_equality ks = k*sound_horizon ! Main Variables tf_cdm = 1./(1.+(ks/5.4)**4.) tf_cdm = tf_cdm*TF_pressureless(q,1.,beta_c) + & & (1.-tf_cdm)*TF_pressureless(q,alpha_c,beta_c) s_tilde = sound_horizon/(1.+(beta_node/ks)**3.)**(1./3.) tf_baryon = TF_pressureless(q,1.,1.)/(1.+(ks/5.2)**2.) tf_baryon = tf_baryon + alpha_b/(1.+(beta_b/ks)**3) & & *exp(-(k/k_silk)**(1.4)) tf_baryon = tf_baryon *(sin(k*s_tilde)/(k*s_tilde)) tf_full = f_baryon*tf_baryon + (1-f_baryon)*tf_cdm TFmdm_onek_mpc=tf_full; return end function TFmdm_onek_mpc !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc ! auxiliary function: Pressureless TF real function TF_pressureless(q,a,b) real q,a,b TF_pressureless = Log(exp(1.)+1.8*b*q) TF_pressureless = TF_pressureless/(TF_pressureless + & & (14.2/a + 386/(1.+69.9*q**1.08))*q**2) return end function TF_pressureless !ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc mpgrafic-0.3.15/src/parallel_io.c000066400000000000000000000160201314565475200166210ustar00rootroot00000000000000/*************************************************************************** * Copyright (C) 2008-2017 by Simon Prunet, Christophe Pichon et al * * prunet iap.fr * * * * This program is free software; you can redistribute it and/or modify * * it under the terms of the GNU General Public License as published by * * the Free Software Foundation; either version 2 of the License, or * * (at your option) any later version. * * * * This program is distributed in the hope that it will be useful, * * but WITHOUT ANY WARRANTY; without even the implied warranty of * * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * * GNU General Public License for more details. * * * * You should have received a copy of the GNU General Public License * * along with this program; if not, write to the * * Free Software Foundation, Inc., * * 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA * * or see https://www.gnu.org/licenses/licenses.html#GPL . * **************************************************************************/ #define _XOPEN_SOURCE 500 #include #include #include #include #include #include #include #include //#include //#define OFFSET_MAX 274877906944 // 4*4096^3 #define OFFSET_MAX ((int64_t)2199023255552) // 4*8192^3 int parallel_write(char*,size_t,int64_t,void*); int parallel_read(char*,size_t,int64_t,void*); #if defined ADD0US void f77_parallel_read(char*,int32_t*,size_t*,int64_t*,void*); void f77_parallel_write(char*,int32_t*,size_t*,int64_t*,void*); #elif defined ADD2US void f77_parallel_read__(char*,int32_t*,size_t*,int64_t*,void*); void f77_parallel_write__(char*,int32_t*,size_t*,int64_t*,void*); #else void f77_parallel_read_(char*,int32_t*,size_t*,int64_t*,void*); void f77_parallel_write_(char*,int32_t*,size_t*,int64_t*,void*); #endif // This routine writes size bytes of buffer at position offset // in the file filename. // Can be used in multiple concurrent access int parallel_write(char *filename, size_t size, int64_t offset, void *buffer) { int fd; //file descriptor ssize_t i_stat; /* I/O status */ /* Comment: stat.h has a stat(...) function */ if ((int64_t)size + offset > OFFSET_MAX) { fprintf(stderr,"You are trying to access a file location\n"); /* lld is needed here because some systems have long int = 32 bits: */ fprintf(stderr,"which is bigger than %lld\n",(long long int)OFFSET_MAX); fprintf(stderr,"Verify your code and/or change OFFSET_MAX\n"); return(1); } fd = open(filename,O_RDWR|O_CREAT,S_IRUSR|S_IWUSR); i_stat=pwrite(fd,buffer,size,offset); close(fd); if (-1 == i_stat || (size_t)i_stat != size) return(1); else return(0); } // This routine reads size bytes of buffer at position offset // in the file filename. // Can be used in multiple concurrent access int parallel_read(char *filename, size_t size, int64_t offset, void *buffer) { int fd; //file descriptor ssize_t i_stat; // I/O status if ((int64_t)size + offset > OFFSET_MAX) { fprintf(stderr,"You are trying to access a file location\n"); fprintf(stderr,"which is bigger than %lld\n",(long long int)OFFSET_MAX); fprintf(stderr,"Verify your code and/or change OFFSET_MAX\n"); return(1); } fd = open(filename,O_RDONLY); i_stat = pread(fd,buffer,size,offset); close(fd); if (-1 == i_stat || (size_t)i_stat != size) return(1); else return(0); } // Fortran wrappers #if defined ADD0US void f77_parallel_read(char *filename, int32_t *fnamelen, size_t *size, int64_t *offset, void *buffer) { #elif defined ADD2US void f77_parallel_read__(char *filename, int32_t *fnamelen, size_t *size, int64_t *offset, void *buffer) { #else void f77_parallel_read_(char *filename, int32_t *fnamelen, size_t *size, int64_t *offset, void *buffer) { #endif int i_stat; char *filename_null_terminated; filename_null_terminated = (char*)malloc((size_t)(*fnamelen)+1); filename_null_terminated[0] = '\0'; strncat(filename_null_terminated, filename, (size_t)(*fnamelen)); /* filename[*fnamelen]='\0'; */ /* writing to unallocated memory is risky */ i_stat = parallel_read(filename_null_terminated,*size,*offset,buffer); if (i_stat !=0) fprintf(stderr,"Failure to read %s with parallel_read\n", filename_null_terminated ); free(filename_null_terminated); } #if defined ADD0US void f77_parallel_write(char *filename, int32_t *fnamelen, size_t *size, int64_t *offset, void *buffer) { #elif defined ADD2US void f77_parallel_write__(char *filename, int32_t *fnamelen, size_t *size, int64_t *offset, void *buffer) { #else void f77_parallel_write_(char *filename, int32_t *fnamelen, size_t *size, int64_t *offset, void *buffer) { #endif int i_stat; char *filename_null_terminated; filename_null_terminated = (char*)malloc((size_t)(*fnamelen)+1); filename_null_terminated[0] = '\0'; strncat(filename_null_terminated, filename, (size_t)(*fnamelen)); /* filename[*fnamelen]='\0'; */ /* writing to unallocated memory is risky */ i_stat = parallel_write(filename_null_terminated,*size,*offset,buffer); if (i_stat !=0) fprintf(stderr,"Failure to write %s with parallel_read\n", filename_null_terminated ); free(filename_null_terminated); } /// /* TMP_main(int argc, char **argv) { int fd; char filename[128]; long nsize, noffset; float *buffer; int i, i_stat; int myid, nproc; MPI_Init(&argc,&argv); MPI_Comm_size(MPI_COMM_WORLD,&nproc); MPI_Comm_rank(MPI_COMM_WORLD,&myid); if (argc != 3 && myid==0) { fprintf(stderr,"io filename nsize\n"); MPI_Finalize(); exit(1); } strcpy(filename,argv[1]); nsize=atoi(argv[2]); // number of floats to read/write // noffset=atoi(argv[3]); // offset in sizeof(float) noffset=myid*nsize; fd = open(filename,O_RDWR|O_CREAT,S_IRUSR|S_IWUSR); buffer = (float*)malloc(nsize*sizeof(float)); for (i=0;i nx .or. nys > ny .or. nzs > nz) then !!$ if (myid==0) print*,'Wrong box sizes, aborting' !!$ call mpi_finalize(ierr) !!$ stop !!$ endif !!$ !!$ if (nx*dx /= nxs*dxs) then !!$ if (myid==0) print*,'Incompatible physical box sizes, aborting' !!$ call mpi_finalize(ierr) !!$ stop !!$ endif !!$ !!$ if (head_cosmo%astart/=small_head_cosmo%astart .or. & !!$ & head_cosmo%omegam/=small_head_cosmo%omegam .or. & !!$ & head_cosmo%omegav/=small_head_cosmo%omegav .or. & !!$ & head_cosmo%h0/=small_head_cosmo%h0) then !!$ if (myid==0) print*,'Incompatible cosmological parameters, aborting' !!$ call mpi_finalize(ierr) !!$ stop !!$ endif ! verify that modes need to be pasted ! debut is .true. if positive kz modes need padding ! fin is .true. if negative kz modes need padding ! Beware that all values of the pair (debut,fin) can happen ... ! The pasting policy is to get rid of all Nyquist planes in the small ! box, and retain the corresponding (non-Nyquist) frequencies (positive ! and negative) of the large box. ! First element is a positive (small) kx frequency (Nyquist excluded) if (local_z_start <= nzs/2-1) debut=.true. ! Last element is a negative (small) kx frequency if (local_z_start+local_nz-1 >= nz-nzs/2+1) fin=.true. if (debut) then local_nzs = min(local_z_start+local_nz,nzs/2)-local_z_start local_z_starts = local_z_start allocate(sbuffer(local_nzs*nys*n2xs)) ! Read small k grid. This avoids complicated communication ... call grafic_read(sbuffer,local_nzs,local_z_starts,nys,nxs, & & small_file_name,padding_in=.true.) ! Fill "debut": positive kx frequency modes do k=1,local_nzs ! Fill positive ky frequency modes, including ky=0, skipping nyq_y do j=1,nys/2 do i=1,n2xs-2 ! Skip nyq_z index_big = int((k-1)*ny+j-1,8)*n2x+i index_small = ((k-1)*nys+j-1)*n2xs+i buffer(index_big)=sbuffer(index_small) enddo enddo ! Now fill negative ky frequency modes do j=nys/2+2,nys do i=1,n2xs-2 index_big = int((k-1)*ny+j+ny-nys-1,8)*n2x+i index_small = ((k-1)*nys+j-1)*n2xs+i buffer(index_big)=sbuffer(index_small) enddo enddo enddo deallocate(sbuffer) endif if (fin) then local_z_start_end = max(local_z_start,nz-nzs/2+1) local_z_starts = local_z_start_end-nz+nzs ! Small cube index local_nzs = local_nz - (local_z_start_end - local_z_start) allocate(sbuffer(local_nzs*nys*n2xs)) call grafic_read(sbuffer,local_nzs,local_z_starts,nys,nxs, & & small_file_name,padding_in=.true.) ! Fill "fin": negative kx frequency modes do k=1,local_nzs kk = k+local_z_start_end-local_z_start ! Fill positive ky frequency modes, including ky=0, skipping nyq_y do j=1,nys/2 do i=1,n2xs-2 ! Skip nyq_z index_big = int((kk-1)*ny+j-1,8)*n2x+i index_small = ((k-1)*nys+j-1)*n2xs+i buffer(index_big)=sbuffer(index_small) enddo enddo ! Fill negative ky frequency modes do j=nys/2+2,nys do i=1,n2xs-2 index_big = int((kk-1)*ny+j+ny-nys-1,8)*n2x+i index_small = ((k-1)*nys+j-1)*n2xs+i buffer(index_big)=sbuffer(index_small) enddo enddo enddo deallocate(sbuffer) endif end subroutine grid_paste end module paste mpgrafic-0.3.15/src/random.f90000066400000000000000000000256331314565475200160040ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! Copyright (C) 2008-2017 by Simon Prunet, Christophe Pichon et al ! ! prunet iap.fr ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !======================================================================= ! ! P A R A L L E L R A N D O M N U M B E R G E N E R A T O R ! !======================================================================= ! Here's how to use these functions: ! Initialization: call Rans( N, StartVal, Seeds ) ! This returns an array of M seeds, where M = N if N is odd, or N+1 ! otherwise; the returned seeds have values that partition the basic ! ranf cycle of 2**46 pseudorandom reals in [0,1] into independent sub- ! sequences. The second argument, StartVal, can be a cycle-starting seed ! for the full-period generator; if it is zero, a special seed will be ! used that produces statistically desirable behavior. ! Use: call Ranf( Seed, RandNum ) ! This returns a pseudorandom real and a seed to be passed back in the ! next invocation. The returned seed carries the state normally hidden ! in imperative generators. !======================================================================= !TODO: (kind=8) is not portable - replace this by a portable version #include "../config.h" module random use iso_C_binding integer(c_int32_t),parameter :: MaxParallelism = 65536 !!! TO BE INCREASED IF NEEDED! integer(c_int32_t),parameter :: MaxRandNumStreams = MaxParallelism integer,parameter :: IRandNumSize = 4, IBinarySize = 48 integer,parameter :: Mod4096DigitSize = 12 !integer,parameter :: IAmountofParallelism = 128 integer,parameter :: IZero = 0 integer,parameter :: NPoissonLimit = 10 integer,dimension( IRandNumSize ) :: & & Multiplier = (/373, 3707, 1442, 647/) integer,dimension( IRandNumSize ) :: & & DefaultSeed = (/ 3281, 4041, 595, 2376 /) real(kind=8),dimension( IRandNumSize ) :: & & Divisor = (/281474976710656.0,68719476736.0,16777216.0,4096.0/) integer :: IGauss = 0 real(kind=8) :: GaussBak = 0.0d0 contains !======================================================================= subroutine ranf( Seed, RandNum ) implicit none integer,dimension( IRandNumSize ) :: Seed real(kind=8) :: RandNum integer,dimension( IRandNumSize ) :: OutSeed RandNum = float( Seed( 4 ) ) / Divisor( 4 ) + & & float( Seed( 3 ) ) / Divisor( 3 ) + & & float( Seed( 2 ) ) / Divisor( 2 ) + & & float( Seed( 1 ) ) / Divisor( 1 ) call ranfmodmult( Multiplier, Seed, OutSeed ) Seed = OutSeed return end subroutine ranf !======================================================================= !======================================================================= subroutine poissdev( Seed, AverNum , PoissNum) implicit none integer,dimension( IRandNumSize ) :: Seed real(kind=8) :: AverNum integer :: PoissNum real(kind=8) :: Norm, Repar, Proba real(kind=8) :: RandNum, GaussNum if(AverNum <= DBLE(NPoissonLimit)) then Norm=exp(-AverNum) Repar=1.0d0 PoissNum=0 Proba=1.0d0 call ranf(Seed,RandNum) do while(Repar*Norm <= RandNum .and. PoissNum <= 10*NPoissonLimit ) PoissNum=PoissNum+1 Proba=Proba*AverNum/PoissNum Repar=Repar+Proba end do else call gaussdev(Seed,GaussNum) GaussNum=GaussNum*sqrt(AverNum)-0.5+AverNum if(GaussNum<=0.0d0)GaussNum=0.0d0 PoissNum=nint(GaussNum) endif return end subroutine poissdev !======================================================================= !======================================================================= subroutine gaussdev( Seed, GaussNum ) implicit none integer,dimension( IRandNumSize ) :: Seed real(kind=8) :: GaussNum real(kind=8) :: fac,rsq,v1,v2 if (IGauss.eq.IZero) then rsq=0.0d0 do while (rsq.ge.1.0d0.or.rsq.le.0.0d0) call ranf(Seed,v1) call ranf(Seed,v2) v1=2.0d0*v1-1.0d0 v2=2.0d0*v2-1.0d0 rsq=v1**2+v2**2 end do fac=sqrt(-2.0d0*log(rsq)/rsq) GaussBak=v1*fac GaussNum=v2*fac IGauss=1 else GaussNum=GaussBak IGauss=0 endif return END subroutine gaussdev !======================================================================= !======================================================================= subroutine rans( NIn, StartVal, SeedArray ) implicit none integer :: NIn integer :: StartVal integer,dimension( MaxRandNumStreams, IRandNumSize ) :: SeedArray integer,dimension( IRandNumSize ) :: atothek integer,dimension( IRandNumSize ) :: K integer,dimension( IRandNumSize ) :: InSeed integer,dimension( IRandNumSize ) :: OutSeed integer,dimension( IBinarySize ) :: KBinary integer :: N, I if( mod(NIn,2) .eq. 1 ) then N = NIn else N = NIn + 1 endif if( StartVal .eq. IZero ) then SeedArray( 1, 1 ) = DefaultSeed( 1 ) SeedArray( 1, 2 ) = DefaultSeed( 2 ) SeedArray( 1, 3 ) = DefaultSeed( 3 ) SeedArray( 1, 4 ) = DefaultSeed( 4 ) else SeedArray( 1, 1 ) = abs( StartVal ) SeedArray( 1, 2 ) = IZero SeedArray( 1, 3 ) = IZero SeedArray( 1, 4 ) = IZero endif if( N .eq. 1 ) then atothek( 1 ) = Multiplier( 1 ) atothek( 2 ) = Multiplier( 2 ) atothek( 3 ) = Multiplier( 3 ) atothek( 4 ) = Multiplier( 4 ) else call ranfk( N, K ) call ranfkbinary( K, KBinary ) call ranfatok( Multiplier, KBinary, atothek ) do I = 2, N InSeed( 1 ) = SeedArray( I-1, 1 ) InSeed( 2 ) = SeedArray( I-1, 2 ) InSeed( 3 ) = SeedArray( I-1, 3 ) InSeed( 4 ) = SeedArray( I-1, 4 ) call ranfmodmult( InSeed, atothek, OutSeed ) SeedArray( I, 1 ) = OutSeed( 1 ) SeedArray( I, 2 ) = OutSeed( 2 ) SeedArray( I, 3 ) = OutSeed( 3 ) SeedArray( I, 4 ) = OutSeed( 4 ) end do endif return end subroutine rans !======================================================================= !======================================================================= subroutine ranfatok( a, Kbinary, atothek ) implicit none integer,dimension( IRandNumSize ) :: a integer,dimension( IBinarySize ) :: KBinary integer,dimension( IRandNumSize ) :: atothek integer,dimension( IRandNumSize ) :: asubi integer :: I asubi( 1 ) = a( 1 ) asubi( 2 ) = a( 2 ) asubi( 3 ) = a( 3 ) asubi( 4 ) = a( 4 ) atothek( 1 ) = 1 atothek( 2 ) = IZero atothek( 3 ) = IZero atothek( 4 ) = IZero do I = 1, 45 if( KBinary( I ) .ne. IZero ) then call ranfmodmult( atothek, asubi, atothek ) endif call ranfmodmult( asubi, asubi, asubi ) end do return end subroutine ranfatok !======================================================================= !======================================================================= subroutine ranfk( N, K ) implicit none integer :: N integer, dimension( IRandNumSize ) :: K integer :: nn, r4, r3, r2, q4, q3, q2, q1 nn = N + iranfeven( N ) q4 = 1024 / nn r4 = 1024 - (nn * q4) q3 = (r4 * 4096) / nn r3 = (r4 * 4096) - (nn * q3) q2 = (r3 * 4096) / nn r2 = (r3 * 4096) - (nn * q2) q1 = (r2 * 4096) / nn K( 1 ) = q1 K( 2 ) = q2 K( 3 ) = q3 K( 4 ) = q4 return end subroutine ranfk !======================================================================= !======================================================================= subroutine ranfkbinary( K, KBinary ) implicit none integer, dimension( IRandNumSize ) :: K integer, dimension( IBinarySize ) :: KBinary integer, dimension( Mod4096DigitSize ) :: Bits integer X, I, J do I = 1, 4 X = K( I ) / 2 Bits( 1 ) = iranfodd( K( I ) ) do J = 2, Mod4096DigitSize Bits( J ) = iranfodd( X ) X = X / 2 end do do J = 1, Mod4096DigitSize KBinary( (I-1)*Mod4096DigitSize + J ) = Bits( J ) end do end do return end subroutine ranfkbinary !======================================================================= !======================================================================= subroutine ranfmodmult( A, B, C ) implicit none integer, dimension( IRandNumSize ) :: A, B, C integer :: j1, j2, j3, j4, k1, k2, k3, k4 j1 = A( 1 ) * B( 1 ) j2 = A( 1 ) * B( 2 ) + A( 2 ) * B( 1 ) j3 = A( 1 ) * B( 3 ) + A( 2 ) * B( 2 ) + A( 3 ) * B( 1 ) j4 = A( 1 ) * B( 4 ) + A( 2 ) * B( 3 ) + A( 3 ) * B( 2 ) + A( 4 ) * B( 1 ) k1 = j1 k2 = j2 + k1 / 4096 k3 = j3 + k2 / 4096 k4 = j4 + k3 / 4096 C( 1 ) = mod( k1, 4096 ) C( 2 ) = mod( k2, 4096 ) C( 3 ) = mod( k3, 4096 ) C( 4 ) = mod( k4, 4096 ) return end subroutine ranfmodmult !======================================================================= !======================================================================= function iranfodd( N ) integer N if( mod( N, 2 ) .eq. 0 ) then iranfodd = 0 else iranfodd = 1 endif return end function iranfodd !======================================================================= !======================================================================= function iranfeven( N ) integer N if( mod( N, 2 ) .eq. 0 ) then iranfeven = 1 else iranfeven = 0 endif return end function iranfeven !======================================================================= end module random mpgrafic-0.3.15/src/rfftw3d_mpi_create_plan_c_wrap.c000066400000000000000000000040161314565475200224540ustar00rootroot00000000000000/* fftw3d_mpi_create_plan_c_wrap * * Copyright (c) 1997-1999, 2003 Massachusetts Institute of Technology * Copyright (c) 2017 Boud Roukema * * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation; either version 2 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA * */ /* This is a C wrapper for rfftw3d_f77_mpi_create_plan() to bypass the architecture-dependent behaviour of fftw2/openmpi described in Debian openmpi bug #851918. It is derived from mpi/rfftw_f77_mpi.c and mpi/fftw_f77_mpi.h in fftw-2.1.5-4.1 under GPL-2+. This requires `use iso_C_binding' in the calling program, such as mpgrafic-0.3.10. */ #include /************************************************************************/ void rfftw3d_f77_mpi_create_plan_c_wrap (rfftwnd_mpi_plan *p, void *comm, int *nx, int *ny, int *nz, int *idir, int *flags) { fftw_direction dir = *idir < 0 ? FFTW_FORWARD : FFTW_BACKWARD; /* TODO: In principle, the first parameter should be `(MPI_Comm)comm', but there is an MPI (openmpi?) bug/feature related to the creation of duplicate communicators - MPI_Comm_dup. As long as mpgrafic remains a small program, the present hack of hardwiring MPI_COMM_WORLD should work. Strict compiler options will warn about *comm not being used. */ *p = rfftw3d_mpi_create_plan(MPI_COMM_WORLD, *nz,*ny,*nx,dir,*flags); } /****************************************************************************/ mpgrafic-0.3.15/src/time.f90000066400000000000000000000171371314565475200154620ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! Copyright (C) 2008-2017 by Simon Prunet, Christophe Pichon et al ! ! prunet iap.fr ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function aexp(tauu,omegam,omegav) ! Evaluate a(tau) for Friedmann-Lemaitre-Robertson-Walker (FLRW) cosmology. ! (Use tauu here to avoid conflict with function tau.) ! Omegam := Omega today (a=1) in matter. ! Omegav := Omega today (a=1) in vacuum energy. ! dtau := H0*dt/a^2. real aexp,tauu,omegam,omegav,tau,eta external tau ! Initial guess: matter-dominated solution. aexp=1.0/(1.0-tauu*(sqrt(omegam)-0.25*omegam*tauu)) ! Newton-Raphson iteration. niter=0 10 niter=niter+1 eta=sqrt(omegam/aexp+omegav*aexp*aexp+1.0-omegam-omegav) error=(tau(aexp,omegam,omegav)-tauu)*aexp*aexp*eta aerr=abs(error) rerr=aerr/aexp aexp=aexp-error if (min(aerr,rerr).gt.1.0d-6.and.niter.lt.10) go to 10 return end !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function tau(a,omegam,omegav) ! Evaluate tau(a) (inverse of a(tau)) for FLRW cosmology. ! Omegam := Omega today (a=1) in matter. ! Omegav := Omega today (a=1) in vacuum energy. ! dtau := H0*dt/a^2. real tau,a,omegam,omegav double precision om,ov,adp,rombint,dtauda common /omegas/ om,ov external dtauda om=omegam ov=omegav adp=a tau=rombint(dtauda,1.0d0,adp,1.0d-8) return end !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function dtauda(a) implicit double precision (a-h,o-z) common /omegas/ omegam,omegav eta=sqrt(omegam/a+omegav*a*a+1.0d0-omegam-omegav) dtauda=1.0d0/(a*a*eta) return end !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function dladt(a,omegam,omegav) ! Evaluate dln(a)/dtau for FLRW cosmology. ! Omegam := Omega today (a=1) in matter. ! Omegav := Omega today (a=1) in vacuum energy. real dladt,a,omegam,omegav,eta eta=sqrt(omegam/a+omegav*a*a+1.0-omegam-omegav) ! N.B. eta=a*H/H0, dladt = da/(H0*dtau) where tau is conformal time! dladt=a*eta return end !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function dplus(a,omegam,omegav) ! Evaluate D+(a) (linear growth factor) for FLRW cosmology. ! Omegam := Omega today (a=1) in matter. ! Omegav := Omega today (a=1) in vacuum energy. real dplus,a,omegam,omegav,eta double precision om,ov,adp,rombint,ddplus common /omegas/ om,ov external ddplus om=omegam ov=omegav adp=a eta=sqrt(omegam/a+omegav*a*a+1.0-omegam-omegav) dplus=eta/a*rombint(ddplus,0.0d0,adp,1.0d-8) return end !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function ddplus(a) implicit double precision (a-h,o-z) common /omegas/ omegam,omegav if (a.eq.0.0d0) then ddplus=0.0d0 return end if eta=sqrt(omegam/a+omegav*a*a+1.0d0-omegam-omegav) ddplus=2.5d0/(eta*eta*eta) return end !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function adp(dpls,omegam,omegav) ! Inverts the function dpls=dplus(a,omegam,omegav) for a=adp. real adp,dpls,omegam,omegav,dplus,fomega external dplus,fomega ! if (dpls.eq.0.0) then adp=0.0 return end if ! Initial guess. adp=1.0e-3 ! Newton-Raphson iteration. niter=0 10 niter=niter+1 dpls0=dplus(adp,omegam,omegav) ddplda=dpls0*fomega(adp,omegam,omegav)/adp error=(dpls0-dpls)/ddplda adp=adp-error aerr=abs(error) rerr=aerr/adp if (min(aerr,rerr).gt.1.0e-6.and.niter.lt.10) go to 10 return end !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function fomega(a,omegam,omegav) ! Evaluate f := dlog[D+]/dlog[a] (logarithmic linear growth rate) for ! lambda+matter-dominated cosmology. ! Omega0 := Omega today (a=1) in matter only. Omega_lambda = 1 - Omega0. real fomega,a,omegam,omegav,dplus,eta external dplus ! if (omegam.eq.1.0.and.omegav.eq.0.0) then fomega=1.0 return end if omegak=1.0-omegam-omegav eta=sqrt(omegam/a+omegav*a*a+omegak) fomega=(2.5/dplus(a,omegam,omegav)-1.5*omegam/a-omegak)/(eta*eta) return end !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc function rombint(f,a,b,tol) ! Rombint returns the integral from a to b of f(x)dx using Romberg integration. ! The method converges provided that f(x) is continuous in (a,b). The function ! f must be double precision and must be declared external in the calling ! routine. tol indicates the desired relative accuracy in the integral. ! parameter (MAXITER=100,MAXJ=5) implicit double precision (a-h,o-z) dimension g(MAXJ+1) external f ! h=0.5d0*(b-a) gmax=h*(f(a)+f(b)) g(1)=gmax nint=1 error=1.0d20 i=0 10 i=i+1 if (i.gt.MAXITER.or.(i.gt.5.and.abs(error).lt.tol)) & & go to 40 ! Calculate next trapezoidal rule approximation to integral. g0=0.0d0 do 20 k=1,nint g0=g0+f(a+(k+k-1)*h) 20 continue g0=0.5d0*g(1)+h*g0 h=0.5d0*h nint=nint+nint jmax=min(i,MAXJ) fourj=1.0d0 do 30 j=1,jmax ! Use Richardson extrapolation. fourj=4.0d0*fourj g1=g0+(g0-g(j))/(fourj-1.0d0) g(j)=g0 g0=g1 30 continue if (abs(g0).gt.tol) then error=1.0d0-gmax/g0 else error=gmax end if gmax=g0 g(jmax+1)=g0 go to 10 40 rombint=g0 if (i.gt.MAXITER.and.abs(error).gt.tol) & & write(*,*) 'Rombint failed to converge; integral, error, i=', & & rombint,error,i return end mpgrafic-0.3.15/src/transform.f90000066400000000000000000000101071314565475200165250ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! Copyright (C) 2008-2017 by Simon Prunet, Christophe Pichon et al ! ! prunet iap.fr ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! module transform use grafic_types IMPLICIT NONE #ifdef ADD1US #define rfftw3d_f77_create_plan rfftw3d_f77_create_plan_ #define rfftwnd_f77_destroy_plan rfftwnd_f77_destroy_plan_ #define rfftwnd_f77_one_real_to_complex rfftwnd_f77_one_real_to_complex_ #define rfftw3d_f77_mpi_create_plan rfftw3d_f77_mpi_create_plan_ #define rfftwnd_f77_mpi_destroy_plan rfftwnd_f77_mpi_destroy_plan_ #define rfftwnd_f77_mpi rfftwnd_f77_mpi_ #define rfftwnd_f77_mpi_local_sizes rfftwnd_f77_mpi_local_sizes_ #endif interface fft_mpi module procedure fft_mpi_single, fft_mpi_double end interface contains subroutine fft_forward(l,m,n,input,output) integer :: l,m,n real*8, dimension(l,m,n), intent(in) :: input complex*16, dimension(l/2+1,m,n), intent(out) :: output integer*8 :: plan call rfftw3d_f77_create_plan(plan,l,m,n,FFTW_REAL_TO_COMPLEX, & & FFTW_ESTIMATE) call rfftwnd_f77_one_real_to_complex(plan,input,output) call rfftwnd_f77_destroy_plan(plan) end subroutine fft_forward ! This covers both forward and backward ffts, ! depending on plan subroutine fft_mpi_double(plan,input,total_local_size) use iso_C_binding ! Arguments type(c_ptr) :: plan integer :: total_local_size real(dp), dimension(total_local_size) :: input ! Local variables !integer :: ierr,myid,status !real*4 :: tstart, tstop real*8, allocatable, dimension(:) :: work !allocate(work(total_local_size),stat=status) !if (status /= 0) then ! print*,'Could not allocate work for proc #',myid ! stop !endif allocate(work(1)) !!$ call rfftwnd_f77_mpi(plan,1,input,work, & !!$ & 0,FFTW_TRANSPOSED_ORDER) call rfftwnd_f77_mpi(plan,1,input,work, & & 0,FFTW_NORMAL_ORDER) !0 to ignore work, 1 to use it deallocate(work) end subroutine fft_mpi_double subroutine fft_mpi_single(plan,input,total_local_size) use iso_C_binding ! Arguments type(c_ptr) :: plan integer :: total_local_size real(sp), dimension(total_local_size) :: input ! Local variables !integer :: ierr,myid,status !real*4 :: tstart, tstop real*4, allocatable, dimension(:) :: work !allocate(work(total_local_size),stat=status) !if (status /= 0) then ! print*,'Could not allocate work for proc #',myid ! stop !endif allocate(work(1)) !!$ call rfftwnd_f77_mpi(plan,1,input,work, & !!$ & 0,FFTW_TRANSPOSED_ORDER) call rfftwnd_f77_mpi(plan,1,input,work, & & 0,FFTW_NORMAL_ORDER) !0 to ignore work, 1 to use it deallocate(work) end subroutine fft_mpi_single end module transform mpgrafic-0.3.15/src/util.f90000066400000000000000000000151371314565475200154770ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! Copyright (C) 2008-2017 by Simon Prunet, Christophe Pichon et al ! ! prunet iap.fr ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc subroutine splder(y,dy,n) ! Splder fits a cubic spline to y and returns the first derivatives at ! the grid points in dy. dy is equivalent to a 4th-order Pade ! difference formula for dy/di. ! implicit double precision (a-h,o-z) dimension f(100001),gspl(100001),y(n),dy(n) common /spline/ gspl ! n1=n-1 if (n1.gt.100000) & & write(*,*) 'Spline array overflow!!! n1=',n1,'>100000' ! Quartic fit to dy/di at boundaries, assuming d3y/di3=0. f(1)=(-10.0d0*y(1)+15.0d0*y(2)-6.0d0*y(3)+y(4))/6.0d0 f(n)=(10.0d0*y(n)-15.0d0*y(n1)+6.0d0*y(n-2)-y(n-3))/6.0d0 ! Solve the tridiagonal system ! dy(i-1)+4*dy(i)+dy(i+1)=3*(y(i+1)-y(i-1)), i=2,3,...,n1, ! with dy(1)=f(1), dy(n)=f(n). do 10 i=2,n1 f(i)=gspl(i)*(3.0d0*(y(i+1)-y(i-1))-f(i-1)) 10 continue dy(n)=f(n) do 20 i=n1,1,-1 dy(i)=f(i)-gspl(i)*dy(i+1) 20 continue return end !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc subroutine spintn(y,dy,z,n) ! Spintn calculates z(i) = the integral from 1 to i of s(j)dj, for 1 <= i <= n, ! where s is the spline fit to y, and dy = ds/di. ! implicit double precision (a-h,o-z) dimension y(n),dy(n),z(n) ztemp=0.0d0 do 10 i=2,n ztemp1=ztemp+0.5d0*(y(i-1)+y(i))+(dy(i-1)-dy(i))/12.0d0 z(i-1)=ztemp ztemp=ztemp1 10 continue z(n)=ztemp return end !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc subroutine splini ! Splini must be called before splder to initialize array g in common. implicit double precision (a-h,o-z) dimension gspl(100001) common /spline/ gspl save /spline/ ! gspl(1)=0.0d0 do 10 i=2,100001 gspl(i)=1.0d0/(4.0d0-gspl(i-1)) 10 continue return end !cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc subroutine matinv(a,n,np,y) ! Invert the double precision nxn matrix a; physical dimensions are np x np. ! Inverse is returned in y. WARNING: a is destroyed! double precision a(np,np),y(np,np) parameter (nmax=1000) dimension indx(nmax) if (n.gt.nmax) then write(*,*) 'increase storage in ludcmp! n,nmax=',n,nmax end if do 12 j=1,n do 11 i=1,n y(i,j)=0.0d0 11 continue y(j,j)=1.0d0 12 continue call ludcmp(a,n,np,indx) do 13 j=1,n call lubksb(a,n,np,indx,y(1,j)) 13 continue return end subroutine ludcmp(a,n,np,indx) parameter (tiny=0.0d-20,nmax=1000) double precision a(np,np),sum,temp double precision aamax,vv(nmax) dimension indx(n) if (n.gt.nmax) then write(*,*) 'increase storage in ludcmp! n,nmax=',n,nmax end if do 12 i=1,n aamax=0.0d0 do 11 j=1,n if (abs(a(i,j)).gt.aamax) aamax=abs(a(i,j)) 11 continue if(aamax.eq.0.d0)then write(6,*)'singular matrix.' stop endif vv(i)=1./aamax 12 continue do 19 j=1,n if (j.gt.1) then do 14 i=1,j-1 sum=a(i,j) if (i.gt.1) then do 13 k=1,i-1 sum=sum-a(i,k)*a(k,j) 13 continue a(i,j)=sum endif 14 continue endif aamax=0.0d0 do 16 i=j,n sum=a(i,j) if (j.gt.1) then do 15 k=1,j-1 sum=sum-a(i,k)*a(k,j) 15 continue a(i,j)=sum endif temp=vv(i)*abs(sum) if (temp.ge.aamax) then imax=i aamax=temp endif 16 continue if (j.ne.imax) then do 17 k=1,n temp=a(imax,k) a(imax,k)=a(j,k) a(j,k)=temp 17 continue vv(imax)=vv(j) endif indx(j)=imax if (j.ne.n) then ! if (a(j,j).eq.0.d0) a(j,j)=tiny temp=1.0d0/a(j,j) do 18 i=j+1,n a(i,j)=a(i,j)*temp 18 continue endif 19 continue ! if (a(n,n).eq.0.0d0) a(n,n)=tiny return end ! subroutine lubksb(a,n,np,indx,b) double precision a(np,np),b(np),sum dimension indx(n) ii=0 do 12 i=1,n ll=indx(i) sum=b(ll) b(ll)=b(i) if (ii.ne.0) then do 11 j=ii,i-1 sum=sum-a(i,j)*b(j) 11 continue else if (sum.ne.0.0d0) then ii=i endif b(i)=sum 12 continue do 14 i=n,1,-1 sum=b(i) if (i.lt.n) then do 13 j=i+1,n sum=sum-a(i,j)*b(j) 13 continue endif b(i)=sum/a(i,i) 14 continue return end mpgrafic-0.3.15/src/wrap_gsl_rng_mod.f90000066400000000000000000000050751314565475200200450ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! wrap_gsl_rng_mod - fortran wrapper for bits of GNU Scientific Library ! ! ! ! Copyright (C) 2016-2017 by Boud Roukema ! ! boud cosmo.torun.pl ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! module wrap_gsl_rng_mod ! see e.g. https://stackoverflow.com/tags/fortran-iso-c-binding/info interface subroutine get_gsl_rng_seeds & (iseed, MaxRandNumStreams, seeds) & bind(C, name='get_gsl_rng_seeds') use iso_C_binding implicit none ! INPUTS integer (c_int64_t), value :: iseed integer (c_int32_t), value :: MaxRandNumStreams ! OUTPUT integer (c_int64_t), dimension(MaxRandNumStreams) :: seeds end subroutine get_gsl_rng_seeds end interface interface subroutine gauss_gsl & (Seed, RandNum, free_gauss_gsl) & bind(C, name='gauss_gsl') use iso_C_binding implicit none integer (c_int64_t), value :: Seed ! pass by value real (c_double) :: RandNum ! pass by reference integer (c_int), value :: free_gauss_gsl ! pass by value end subroutine gauss_gsl end interface end module wrap_gsl_rng_mod mpgrafic-0.3.15/src/wrap_rfftw3d_mod.f90000066400000000000000000000054001314565475200177610ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! wrap_rfftw3d_mod - fortran wrapper for bits of fftw2 ! ! ! ! Copyright (C) 2017 by Boud Roukema ! ! boud cosmo.torun.pl ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! module wrap_rfftw3d_mod ! see e.g. https://stackoverflow.com/tags/fortran-iso-c-binding/info interface subroutine rfftw3d_f77_mpi_create_plan_c_wrap & (rfftwnd_mpi_plan, comm, & nx, ny, nz, idir, flags) & bind(C, name='rfftw3d_f77_mpi_create_plan_c_wrap') use iso_C_binding #ifdef HAVE_USE_MPI_F08 use mpi_f08 #endif implicit none #ifndef HAVE_USE_MPI_F08 include 'mpif.h' #endif type (c_ptr) :: rfftwnd_mpi_plan /* C vs fortran communicator types are the reason for this extra wrapper. One implementation of the C communicator typedef is the following: /usr/lib/openmpi/include/mpi.h typedef struct ompi_communicator_t *MPI_Comm Here we bypass this, for programs in which only the MPI_COMM_WORLD communicator is needed. */ #ifdef HAVE_USE_MPI_F08 type(MPI_Comm) :: comm ! dummy #else integer :: comm ! dummy #endif integer(c_int) :: nx, ny, nz integer(c_int) :: idir, flags end subroutine rfftw3d_f77_mpi_create_plan_c_wrap end interface end module wrap_rfftw3d_mod mpgrafic-0.3.15/templates/000077500000000000000000000000001314565475200154025ustar00rootroot00000000000000mpgrafic-0.3.15/templates/c000066400000000000000000000030041314565475200155440ustar00rootroot00000000000000/*************************************************************************** * Copyright (C) 2008-2016 by Simon Prunet, Christophe Pichon et al * * prunet iap.fr * * * * This program is free software; you can redistribute it and/or modify * * it under the terms of the GNU General Public License as published by * * the Free Software Foundation; either version 2 of the License, or * * (at your option) any later version. * * * * This program is distributed in the hope that it will be useful, * * but WITHOUT ANY WARRANTY; without even the implied warranty of * * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * * GNU General Public License for more details. * * * * You should have received a copy of the GNU General Public License * * along with this program; if not, write to the * * Free Software Foundation, Inc., * * 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA * * or see https://www.gnu.org/licenses/licenses.html#GPL . * **************************************************************************/ mpgrafic-0.3.15/templates/f000066400000000000000000000027341314565475200155600ustar00rootroot00000000000000!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! Copyright (C) 2008-2016 by Simon Prunet, Christophe Pichon et al ! ! prunet iap.fr ! ! ! ! This program is free software; you can redistribute it and/or modify ! ! it under the terms of the GNU General Public License as published by ! ! the Free Software Foundation; either version 2 of the License, or ! ! (at your option) any later version. ! ! ! ! This program is distributed in the hope that it will be useful, ! ! but WITHOUT ANY WARRANTY; without even the implied warranty of ! ! MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ! ! GNU General Public License for more details. ! ! ! ! You should have received a copy of the GNU General Public License ! ! along with this program; if not, write to the ! ! Free Software Foundation, Inc., ! ! 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ! ! or see https://www.gnu.org/licenses/licenses.html#GPL . ! !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! mpgrafic-0.3.15/templates/gdl000066400000000000000000000027601314565475200161000ustar00rootroot00000000000000;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; ; Copyright (C) 2008-2016 by Simon Prunet ; ; prunet iap.fr ; ; ; ; This program is free software; you can redistribute it and/or modify ; ; it under the terms of the GNU General Public License as published by ; ; the Free Software Foundation; either version 2 of the License, or ; ; (at your option) any later version. ; ; ; ; This program is distributed in the hope that it will be useful, ; ; but WITHOUT ANY WARRANTY; without even the implied warranty of ; ; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the ; ; GNU General Public License for more details. ; ; ; ; You should have received a copy of the GNU General Public License ; ; along with this program; if not, write to the ; ; Free Software Foundation, Inc., ; ; 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA ; ; or see https://www.gnu.org/licenses/licenses.html#GPL . ; ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; mpgrafic-0.3.15/test-driver000077500000000000000000000102771314565475200156110ustar00rootroot00000000000000#! /bin/sh # test-driver - basic testsuite driver script. scriptversion=2013-07-13.22; # UTC # Copyright (C) 2011-2013 Free Software Foundation, Inc. # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation; either version 2, or (at your option) # any later version. # # This program is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program. If not, see . # As a special exception to the GNU General Public License, if you # distribute this file as part of a program that contains a # configuration script generated by Autoconf, you may include it under # the same distribution terms that you use for the rest of that program. # This file is maintained in Automake, please report # bugs to or send patches to # . # Make unconditional expansion of undefined variables an error. This # helps a lot in preventing typo-related bugs. set -u usage_error () { echo "$0: $*" >&2 print_usage >&2 exit 2 } print_usage () { cat <$log_file 2>&1 estatus=$? if test $enable_hard_errors = no && test $estatus -eq 99; then estatus=1 fi case $estatus:$expect_failure in 0:yes) col=$red res=XPASS recheck=yes gcopy=yes;; 0:*) col=$grn res=PASS recheck=no gcopy=no;; 77:*) col=$blu res=SKIP recheck=no gcopy=yes;; 99:*) col=$mgn res=ERROR recheck=yes gcopy=yes;; *:yes) col=$lgn res=XFAIL recheck=no gcopy=yes;; *:*) col=$red res=FAIL recheck=yes gcopy=yes;; esac # Report outcome to console. echo "${col}${res}${std}: $test_name" # Register the test result, and other relevant metadata. echo ":test-result: $res" > $trs_file echo ":global-test-result: $res" >> $trs_file echo ":recheck: $recheck" >> $trs_file echo ":copy-in-global-log: $gcopy" >> $trs_file # Local Variables: # mode: shell-script # sh-indentation: 2 # eval: (add-hook 'write-file-hooks 'time-stamp) # time-stamp-start: "scriptversion=" # time-stamp-format: "%:y-%02m-%02d.%02H" # time-stamp-time-zone: "UTC" # time-stamp-end: "; # UTC" # End: