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The Debian packaging is: Copyright (C) 2012 Michael Banck and is licensed under the same license as above. debian/javabuild0000644000000000000000000000003312175305107011047 0ustar opsin-1.5.0.jar opsin-core debian/libopsin-java-doc.javadoc0000644000000000000000000000003612146505141014016 0ustar debian/_jh_build.javadoc/api/ debian/source/0000755000000000000000000000000012175306772010500 5ustar debian/source/format0000644000000000000000000000001411727757272011715 0ustar 3.0 (quilt) debian/rules0000755000000000000000000000204112146505141010242 0ustar #!/usr/bin/make -f # -*- makefile -*- # Sample debian/rules that uses debhelper. # This file was originally written by Joey Hess and Craig Small. # As a special exception, when this file is copied by dh-make into a # dh-make output file, you may use that output file without restriction. # This special exception was added by Craig Small in version 0.37 of dh-make. # Uncomment this to turn on verbose mode. #export DH_VERBOSE=1 export JAVA_HOME := /usr/lib/jvm/default-java export CLASSPATH := /usr/share/java/automaton.jar:/usr/share/java/xom.jar:/usr/share/java/commons-io.jar:/usr/share/java/commons-cli.jar:/usr/share/java/junit4.jar:/usr/share/java/log4j-1.2.jar:/usr/share/java/mockito-core.jar:/usr/share/java/jaxen.jar %: dh $@ --with javahelper --parallel override_jh_build: jh_build --main=uk.ac.cam.ch.wwmm.opsin.NameToStructure override_jh_installlibs: jh_installlibs jar -uf debian/libopsin-java/usr/share/java/opsin.jar \ -C opsin-core/src/main/resources . override_dh_installchangelogs: dh_installchangelogs ReleaseNotes.txt debian/watch0000644000000000000000000000013312146505631010217 0ustar version=3 https://bitbucket.org/dan2097/opsin/downloads ^.*/get/([\d.]+)\.tar\.(?:bz2|gz)$ debian/docs0000644000000000000000000000004012146505141010032 0ustar Acknowledgments.txt README.text debian/control0000644000000000000000000000276712146505141010604 0ustar Source: opsin Section: science Priority: extra Maintainer: Debichem Team Uploaders: Michael Banck Build-Depends: ant, debhelper (>= 7.0.50~), default-jdk, javahelper, junit4, libautomaton-java, libcommons-cli-java, libcommons-io-java, liblog4j1.2-java, libmockito-java, libxom-java Standards-Version: 3.9.4 Homepage: http://www-ucc.ch.cam.ac.uk/products/software/opsin Vcs-Browser: http://svn.debian.org/wsvn/debichem/unstable/opsin/ Vcs-Svn: svn://svn.debian.org/svn/debichem/unstable/opsin/ Package: libopsin-java Architecture: all Section: java Depends: ${java:Depends}, ${misc:Depends}, ${shlibs:Depends} Description: Chemical name to structure converter OPSIN (Open Parser for Systematic IUPAC Nomenclature) converts IUPAC compound names to semantic chemical information and outputs a structure either as CML (Chemical Markup Language), SMILES, or InChI. . This package contains the Java library. Package: libopsin-java-doc Architecture: all Section: doc Depends: ${misc:Depends} Description: Chemical name to structure converter (documentation) OPSIN (Open Parser for Systematic IUPAC Nomenclature) converts IUPAC compound names to semantic chemical information and outputs a structure either as CML (Chemical Markup Language), SMILES, or InChI. . This package comprises the javadoc documentation. debian/changelog0000644000000000000000000000164212175305206011044 0ustar opsin (1.5.0-1) unstable; urgency=low [ Daniel Leidert ] * New upstream release. -- Daniel Leidert Sun, 28 Jul 2013 23:17:55 +0200 opsin (1.4.0-1) unstable; urgency=low * New upstream release. [ Daniel Leidert ] * debian/control: Added package libopsin-java-doc. (Standards-Version): Bumped to 3.9.4. (Description): Fixed a typo. * debian/docs: Removed licenses and changelog. * debian/javabuild, debian/libopsin-java.jlibs: Fixed version number. * debian/libopsin-java.javadoc: Renamed to debian/libopsin-java-doc.javadoc and adjusted path. * debian/rules: Install changelog and enable parallel mode. * debian/watch: Added. -- Debichem Team Mon, 20 May 2013 23:03:55 +0200 opsin (1.2.0-1) unstable; urgency=low * Initial release (Closes: #663636). -- Michael Banck Wed, 21 Mar 2012 13:58:44 +0100 debian/compat0000644000000000000000000000000211727757272010405 0ustar 7