petsc4py-3.7.0/0000755000175000001440000000000012711405164014062 5ustar dalcinlusers00000000000000petsc4py-3.7.0/docs/0000755000175000001440000000000012711405164015012 5ustar dalcinlusers00000000000000petsc4py-3.7.0/docs/index.html0000644000175000001440000002572312711405143017015 0ustar dalcinlusers00000000000000 PETSc for Python

PETSc for Python

Author: Lisandro Dalcin
Contact: dalcinl@gmail.com

Online Documentation

Discussion and Support

Downloads and Development

Citations

If PETSc for Python been significant to a project that leads to an academic publication, please acknowledge that fact by citing the project.

Acknowledgments

This project was partially supported by the Extreme Computing Research Center (ECRC), Division of Computer, Electrical, and Mathematical Sciences & Engineering (CEMSE), King Abdullah University of Science and Technology (KAUST).

petsc4py-3.7.0/docs/petsc4py.info0000644000175000001440000003600312711405163017443 0ustar dalcinlusers00000000000000This is petsc4py.info, produced by makeinfo version 6.0 from petsc4py.texi. PETSc for Python 3.7.0, May 01, 2016 Lisandro Dalcin Copyright © 2016, Lisandro Dalcin INFO-DIR-SECTION Miscellaneous START-INFO-DIR-ENTRY * petsc4py: (petsc4py.info). PETSc for Python. END-INFO-DIR-ENTRY Generated by Sphinx 1.2.3.  File: petsc4py.info, Node: Top, Next: Contents, Up: (dir) PETSc for Python **************** PETSc for Python 3.7.0, May 01, 2016 Lisandro Dalcin Copyright © 2016, Lisandro Dalcin Author: Lisandro Dalcin Contact: Web Site: ‘https://bitbucket.org/petsc/petsc4py’ Date: May 01, 2016 Abstract ======== This document describes petsc4py(1), a Python(2) port to the PETSc(3) libraries. PETSc(4) (the Portable, Extensible Toolkit for Scientific Computation) is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI(5) standard for all message-passing communication. This package provides an important subset of PETSc functionalities and uses NumPy(6) to efficiently manage input and output of array data. A `good friend' of petsc4py is: * mpi4py(7): Python bindings for MPI(8), the `Message Passing Interface'. Other projects depends on petsc4py: * slepc4py(9): Python bindings for SLEPc(10), the `Scalable Library for Eigenvalue Problem Computations'. * Menu: * Contents:: * Index:: — The Detailed Node Listing — Contents * Overview:: * Installation:: * Tutorial:: * Citations:: Overview * Components:: Installation * Using pip or easy_install:: * Using distutils:: Using distutils * Requirements:: * Downloading:: * Building:: * Installing:: ---------- Footnotes ---------- (1) http://bitbucket.org/petsc/petsc4py (2) http://www.python.org (3) http://www.mcs.anl.gov/petsc/ (4) http://www.mcs.anl.gov/petsc/ (5) http://www.mpi-forum.org (6) http://www.numpy.org (7) http://bitbucket.org/mpi4py/mpi4py (8) http://www.mpi-forum.org (9) http://bitbucket.org/slepc/slepc4py (10) http://slepc.upv.es  File: petsc4py.info, Node: Contents, Next: Index, Prev: Top, Up: Top 1 Contents ********** * Menu: * Overview:: * Installation:: * Tutorial:: * Citations::  File: petsc4py.info, Node: Overview, Next: Installation, Up: Contents 1.1 Overview ============ PETSc(1) is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI(2) standard for all message-passing communication. PETSc is intended for use in large-scale application projects *note [petsc-efficient]: 5, and several ongoing computational science projects are built around the PETSc libraries. With strict attention to component interoperability, PETSc facilitates the integration of independently developed application modules, which often most naturally employ different coding styles and data structures. PETSc is easy to use for beginners *note [petsc-user-ref]: 6. Moreover, its careful design allows advanced users to have detailed control over the solution process. PETSc includes an expanding suite of parallel linear and nonlinear equation solvers that are easily used in application codes written in C, C++, and Fortran. PETSc provides many of the mechanisms needed within parallel application codes, such as simple parallel matrix and vector assembly routines that allow the overlap of communication and computation. (petsc-user-ref) S. Balay, S. Abhyankar, M.F. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W.D. Gropp, D. Karpeyev, D. Kaushik, M.G. Knepley, L. Curfman McInnes, K. Rupp, B.F. Smith, S. Zampini, H. Zhang, and H. Zhang, `PETSc Users Manual', ANL-95/11 - Revision 3.7, 2016. ‘http://www.mcs.anl.gov/petsc/petsc-current/docs/manual.pdf’ (petsc-efficient) Satish Balay, Victor Eijkhout, William D. Gropp, Lois Curfman McInnes and Barry F. Smith. Efficient Management of Parallelism in Object Oriented Numerical Software Libraries. Modern Software Tools in Scientific Computing. E. Arge, A. M. Bruaset and H. P. Langtangen, editors. 163–202. Birkhauser Press. 1997. * Menu: * Components:: ---------- Footnotes ---------- (1) http://www.mcs.anl.gov/petsc/ (2) http://www.mpi-forum.org  File: petsc4py.info, Node: Components, Up: Overview 1.1.1 Components ---------------- PETSc is designed with an object-oriented style. Almost all user-visible types are abstract interfaces with implementations that may be chosen at runtime. Those objects are managed through handles to opaque data structures which are created, accessed and destroyed by calling appropriate library routines. PETSc consists of a variety of components. Each component manipulates a particular family of objects and the operations one would like to perform on these objects. These components provide the functionality required for many parallel solutions of PDEs. Vec: Provides the vector operations required for setting up and solving large-scale linear and nonlinear problems. Includes easy-to-use parallel scatter and gather operations, as well as special-purpose code for handling ghost points for regular data structures. Mat: A large suite of data structures and code for the manipulation of parallel sparse matrices. Includes four different parallel matrix data structures, each appropriate for a different class of problems. PC: A collection of sequential and parallel preconditioners, including (sequential) ILU(k), LU, and (both sequential and parallel) block Jacobi, overlapping additive Schwarz methods and (through BlockSolve95) ILU(0) and ICC(0). KSP: Parallel implementations of many popular Krylov subspace iterative methods, including GMRES, CG, CGS, Bi-CG-Stab, two variants of TFQMR, CR, and LSQR. All are coded so that they are immediately usable with any preconditioners and any matrix data structures, including matrix-free methods. SNES: Data-structure-neutral implementations of Newton-like methods for nonlinear systems. Includes both line search and trust region techniques with a single interface. Employs by default the above data structures and linear solvers. Users can set custom monitoring routines, convergence criteria, etc. TS: Code for the time evolution of solutions of PDEs. In addition, provides pseudo-transient continuation techniques for computing steady-state solutions.  File: petsc4py.info, Node: Installation, Next: Tutorial, Prev: Overview, Up: Contents 1.2 Installation ================ * Menu: * Using pip or easy_install:: * Using distutils::  File: petsc4py.info, Node: Using pip or easy_install, Next: Using distutils, Up: Installation 1.2.1 Using `pip' or `easy_install' ----------------------------------- You can use `pip' to install ‘petsc4py’ and its dependencies (‘mpi4py’ is optional but highly recommended): $ pip install [--user] numpy mpi4py $ pip install [--user] petsc petsc4py Alternatively, you can use `easy_install' (deprecated): $ easy_install petsc4py If you already have a working PETSc installation, set environment variables ‘PETSC_DIR’ and ‘PETSC_ARCH’ to appropriate values and next use `pip': $ export PETSC_DIR=/path/to/petsc $ export PETSC_ARCH=arch-linux2-c-opt $ pip install petsc4py  File: petsc4py.info, Node: Using distutils, Prev: Using pip or easy_install, Up: Installation 1.2.2 Using `distutils' ----------------------- * Menu: * Requirements:: * Downloading:: * Building:: * Installing::  File: petsc4py.info, Node: Requirements, Next: Downloading, Up: Using distutils 1.2.2.1 Requirements .................... You need to have the following software properly installed in order to build `PETSc for Python': * Any MPI(1) implementation (2) (e.g., MPICH(3) or Open MPI(4)), built with shared libraries. * A matching version of PETSc(5) built with shared libraries. * NumPy(6) package. ---------- Footnotes ---------- (1) http://www.mpi-forum.org (2) Unless you have appropiatelly configured and built PETSc without MPI (configure option ‘--with-mpi=0’). (3) http://www.mpich.org/ (4) http://www.open-mpi.org (5) http://www.mcs.anl.gov/petsc/ (6) http://www.numpy.org  File: petsc4py.info, Node: Downloading, Next: Building, Prev: Requirements, Up: Using distutils 1.2.2.2 Downloading ................... The `PETSc for Python' package is available for download at the project website generously hosted by Bitbucket. You can use `curl' or `wget' to get a release tarball. * Using `curl': $ curl -O https://bitbucket.org/petsc/petsc4py/petsc4py-X.Y.tar.gz * Using `wget': $ wget https://bitbucket.org/petsc/petsc4py/petsc4py-X.Y.tar.gz  File: petsc4py.info, Node: Building, Next: Installing, Prev: Downloading, Up: Using distutils 1.2.2.3 Building ................ After unpacking the release tarball: $ tar -zxf petsc4py-X.Y.tar.gz $ cd petsc4py-X.Y the distribution is ready for building. Note: `Mac OS X' users employing a Python distribution built with `universal binaries' may need to set the environment variables ‘MACOSX_DEPLOYMENT_TARGET’, ‘SDKROOT’, and ‘ARCHFLAGS’ to appropriate values. As an example, assume your Mac is running `Snow Leopard' on a `64-bit Intel' processor and you want to override the hard-wired cross-development SDK in Python configuration, your environment should be modified like this: $ export MACOSX_DEPLOYMENT_TARGET=10.6 $ export SDKROOT=/ $ export ARCHFLAGS='-arch x86_64' Some environment configuration is needed to inform the location of PETSc. You can set (using `setenv', `export' or what applies to you shell or system) the environment variables ‘PETSC_DIR’, and ‘PETSC_ARCH’ indicating where you have built/installed PETSc: $ export PETSC_DIR=/usr/local/petsc $ export PETSC_ARCH=arch-linux2-c-opt Alternatively, you can edit the file ‘setup.cfg’ and provide the required information below the ‘[config]’ section: [config] petsc_dir = /usr/local/petsc petsc_arch = arch-linux2-c-opt ... Finally, you can build the distribution by typing: $ python setup.py build  File: petsc4py.info, Node: Installing, Prev: Building, Up: Using distutils 1.2.2.4 Installing .................. After building, the distribution is ready for installation. If you have root privileges (either by log-in as the root user of by using `sudo') and you want to install `PETSc for Python' in your system for all users, just do: $ python setup.py install The previous steps will install the ‘petsc4py’ package at standard location ‘`prefix'/lib/python`X'.`X'/site-packages’. If you do not have root privileges or you want to install `PETSc for Python' for your private use, just do: $ python setup.py install --user  File: petsc4py.info, Node: Tutorial, Next: Citations, Prev: Installation, Up: Contents 1.3 Tutorial ============ XXX To be written ... Any contribution welcome!  File: petsc4py.info, Node: Citations, Prev: Tutorial, Up: Contents 1.4 Citations ============= If PETSc for Python been significant to a project that leads to an academic publication, please acknowledge that fact by citing the project. * L. Dalcin, P. Kler, R. Paz, and A. Cosimo, `Parallel Distributed Computing using Python', Advances in Water Resources, 34(9):1124-1139, 2011. ‘http://dx.doi.org/10.1016/j.advwatres.2011.04.013’ * S. Balay, S. Abhyankar, M.F. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W.D. Gropp, D. Karpeyev, D. Kaushik, M.G. Knepley, L. Curfman McInnes, K. Rupp, B.F. Smith, S. Zampini, H. Zhang, and H. Zhang, `PETSc Users Manual', ANL-95/11 - Revision 3.7, 2016. ‘http://www.mcs.anl.gov/petsc/petsc-current/docs/manual.pdf’  File: petsc4py.info, Node: Index, Prev: Contents, Up: Top Index ***** [index] * Menu: * ARCHFLAGS: Building. (line 15) * environment variable; ARCHFLAGS: Building. (line 15) * environment variable; MACOSX_DEPLOYMENT_TARGET: Building. (line 14) * environment variable; PETSC_ARCH: Using pip or easy_install. (line 17) * environment variable; PETSC_ARCH <1>: Building. (line 27) * environment variable; PETSC_DIR: Using pip or easy_install. (line 17) * environment variable; PETSC_DIR <1>: Building. (line 27) * environment variable; SDKROOT: Building. (line 15) * MACOSX_DEPLOYMENT_TARGET: Building. (line 14) * PETSC_ARCH: Using pip or easy_install. (line 17) * PETSC_ARCH <1>: Building. (line 27) * PETSC_DIR: Using pip or easy_install. (line 17) * PETSC_DIR <1>: Building. (line 27) * SDKROOT: Building. (line 15)  Tag Table: Node: Top334 Ref: index doc539 Ref: 0539 Ref: Top-Footnote-11851 Ref: Top-Footnote-21895 Ref: Top-Footnote-31925 Ref: Top-Footnote-41963 Ref: Top-Footnote-52001 Ref: Top-Footnote-62034 Ref: Top-Footnote-72063 Ref: Top-Footnote-82106 Ref: Top-Footnote-92139 Ref: Top-Footnote-102183 Node: Contents2212 Ref: index contents2288 Ref: 12288 Ref: index petsc-for-python2288 Ref: 22288 Node: Overview2382 Ref: overview overview2458 Ref: 32458 Ref: overview doc2458 Ref: 42458 Ref: overview petsc-user-ref3633 Ref: 63633 Ref: overview petsc-efficient3993 Ref: 53993 Ref: Overview-Footnote-14392 Ref: Overview-Footnote-24430 Node: Components4463 Ref: overview components4520 Ref: 74520 Ref: overview slepc4py4520 Ref: 84520 Node: Installation6588 Ref: install installation6681 Ref: 96681 Ref: install doc6681 Ref: a6681 Node: Using pip or easy_install6778 Ref: install using-pip-or-easy-install6878 Ref: b6878 Node: Using distutils7507 Ref: install using-distutils7607 Ref: c7607 Node: Requirements7731 Ref: install requirements7817 Ref: d7817 Ref: Requirements-Footnote-18187 Ref: Requirements-Footnote-28220 Ref: Requirements-Footnote-38336 Ref: Requirements-Footnote-48366 Ref: Requirements-Footnote-58398 Ref: Requirements-Footnote-68436 Node: Downloading8465 Ref: install downloading8568 Ref: e8568 Ref: install slepc4py8568 Ref: f8568 Node: Building8971 Ref: install building9072 Ref: 109072 Node: Installing10500 Ref: install installing10581 Ref: 1110581 Node: Tutorial11156 Ref: tutorial doc11250 Ref: 1211250 Ref: tutorial tutorial11250 Ref: 1311250 Node: Citations11327 Ref: citing citations11400 Ref: 1411400 Ref: citing doc11400 Ref: 1511400 Node: Index12163  End Tag Table  Local Variables: coding: utf-8 End: petsc4py-3.7.0/docs/petsc4py.10000644000175000001440000002613512711405163016655 0ustar dalcinlusers00000000000000.\" Man page generated from reStructuredText. . .TH "PETSC4PY" "1" "May 01, 2016" "3.7" "PETSc for Python" .SH NAME petsc4py \- PETSc for Python . .nr rst2man-indent-level 0 . .de1 rstReportMargin \\$1 \\n[an-margin] level \\n[rst2man-indent-level] level margin: \\n[rst2man-indent\\n[rst2man-indent-level]] - \\n[rst2man-indent0] \\n[rst2man-indent1] \\n[rst2man-indent2] .. .de1 INDENT .\" .rstReportMargin pre: . RS \\$1 . nr rst2man-indent\\n[rst2man-indent-level] \\n[an-margin] . nr rst2man-indent-level +1 .\" .rstReportMargin post: .. .de UNINDENT . RE .\" indent \\n[an-margin] .\" old: \\n[rst2man-indent\\n[rst2man-indent-level]] .nr rst2man-indent-level -1 .\" new: \\n[rst2man-indent\\n[rst2man-indent-level]] .in \\n[rst2man-indent\\n[rst2man-indent-level]]u .. .INDENT 0.0 .TP .B Author Lisandro Dalcin .TP .B Contact \fI\%dalcinl@gmail.com\fP .TP .B Web Site \fI\%https://bitbucket.org/petsc/petsc4py\fP .TP .B Date May 01, 2016 .UNINDENT .SS Abstract .sp This document describes \fI\%petsc4py\fP, a \fI\%Python\fP port to the \fI\%PETSc\fP libraries. .sp \fI\%PETSc\fP (the Portable, Extensible Toolkit for Scientific Computation) is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the \fI\%MPI\fP standard for all message\-passing communication. .sp This package provides an important subset of PETSc functionalities and uses \fI\%NumPy\fP to efficiently manage input and output of array data. .sp A \fIgood friend\fP of petsc4py is: .INDENT 0.0 .INDENT 3.5 .INDENT 0.0 .IP \(bu 2 \fI\%mpi4py\fP: Python bindings for \fI\%MPI\fP, the \fIMessage Passing Interface\fP\&. .UNINDENT .UNINDENT .UNINDENT .sp Other projects depends on petsc4py: .INDENT 0.0 .INDENT 3.5 .INDENT 0.0 .IP \(bu 2 \fI\%slepc4py\fP: Python bindings for \fI\%SLEPc\fP, the \fIScalable Library for Eigenvalue Problem Computations\fP\&. .UNINDENT .UNINDENT .UNINDENT .SH CONTENTS .SS Overview .sp \fI\%PETSc\fP is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the \fI\%MPI\fP standard for all message\-passing communication. .sp PETSc is intended for use in large\-scale application projects [petsc\-efficient], and several ongoing computational science projects are built around the PETSc libraries. With strict attention to component interoperability, PETSc facilitates the integration of independently developed application modules, which often most naturally employ different coding styles and data structures. .sp PETSc is easy to use for beginners [petsc\-user\-ref]\&. Moreover, its careful design allows advanced users to have detailed control over the solution process. PETSc includes an expanding suite of parallel linear and nonlinear equation solvers that are easily used in application codes written in C, C++, and Fortran. PETSc provides many of the mechanisms needed within parallel application codes, such as simple parallel matrix and vector assembly routines that allow the overlap of communication and computation. .IP [petsc-user-ref] 5 S. Balay, S. Abhyankar, M.F. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W.D. Gropp, D. Karpeyev, D. Kaushik, M.G. Knepley, L. Curfman McInnes, K. Rupp, B.F. Smith, S. Zampini, H. Zhang, and H. Zhang, \fIPETSc Users Manual\fP, ANL\-95/11 \- Revision 3.7, 2016. \fI\%http://www.mcs.anl.gov/petsc/petsc\-current/docs/manual.pdf\fP .IP [petsc-efficient] 5 Satish Balay, Victor Eijkhout, William D. Gropp, Lois Curfman McInnes and Barry F. Smith. Efficient Management of Parallelism in Object Oriented Numerical Software Libraries. Modern Software Tools in Scientific Computing. E. Arge, A. M. Bruaset and H. P. Langtangen, editors. 163\-\-202. Birkhauser Press. 1997. .SS Components .sp PETSc is designed with an object\-oriented style. Almost all user\-visible types are abstract interfaces with implementations that may be chosen at runtime. Those objects are managed through handles to opaque data structures which are created, accessed and destroyed by calling appropriate library routines. .sp PETSc consists of a variety of components. Each component manipulates a particular family of objects and the operations one would like to perform on these objects. These components provide the functionality required for many parallel solutions of PDEs. .INDENT 0.0 .TP .B Vec Provides the vector operations required for setting up and solving large\-scale linear and nonlinear problems. Includes easy\-to\-use parallel scatter and gather operations, as well as special\-purpose code for handling ghost points for regular data structures. .TP .B Mat A large suite of data structures and code for the manipulation of parallel sparse matrices. Includes four different parallel matrix data structures, each appropriate for a different class of problems. .TP .B PC A collection of sequential and parallel preconditioners, including (sequential) ILU(k), LU, and (both sequential and parallel) block Jacobi, overlapping additive Schwarz methods and (through BlockSolve95) ILU(0) and ICC(0). .TP .B KSP Parallel implementations of many popular Krylov subspace iterative methods, including GMRES, CG, CGS, Bi\-CG\-Stab, two variants of TFQMR, CR, and LSQR. All are coded so that they are immediately usable with any preconditioners and any matrix data structures, including matrix\-free methods. .TP .B SNES Data\-structure\-neutral implementations of Newton\-like methods for nonlinear systems. Includes both line search and trust region techniques with a single interface. Employs by default the above data structures and linear solvers. Users can set custom monitoring routines, convergence criteria, etc. .TP .B TS Code for the time evolution of solutions of PDEs. In addition, provides pseudo\-transient continuation techniques for computing steady\-state solutions. .UNINDENT .SS Installation .SS Using \fBpip\fP or \fBeasy_install\fP .sp You can use \fBpip\fP to install \fBpetsc4py\fP and its dependencies (\fBmpi4py\fP is optional but highly recommended): .INDENT 0.0 .INDENT 3.5 .sp .nf .ft C $ pip install [\-\-user] numpy mpi4py $ pip install [\-\-user] petsc petsc4py .ft P .fi .UNINDENT .UNINDENT .sp Alternatively, you can use \fBeasy_install\fP (deprecated): .INDENT 0.0 .INDENT 3.5 .sp .nf .ft C $ easy_install petsc4py .ft P .fi .UNINDENT .UNINDENT .sp If you already have a working PETSc installation, set environment variables \fBPETSC_DIR\fP and \fBPETSC_ARCH\fP to appropriate values and next use \fBpip\fP: .INDENT 0.0 .INDENT 3.5 .sp .nf .ft C $ export PETSC_DIR=/path/to/petsc $ export PETSC_ARCH=arch\-linux2\-c\-opt $ pip install petsc4py .ft P .fi .UNINDENT .UNINDENT .SS Using \fBdistutils\fP .SS Requirements .sp You need to have the following software properly installed in order to build \fIPETSc for Python\fP: .INDENT 0.0 .IP \(bu 2 Any \fI\%MPI\fP implementation [1] (e.g., \fI\%MPICH\fP or \fI\%Open MPI\fP), built with shared libraries. .IP \(bu 2 A matching version of \fI\%PETSc\fP built with shared libraries. .IP \(bu 2 \fI\%NumPy\fP package. .UNINDENT .IP [1] 5 Unless you have appropiatelly configured and built PETSc without MPI (configure option \fI\-\-with\-mpi=0\fP). .IP [2] 5 You may need to use a parallelized version of the Python interpreter with some MPI\-1 implementations (e.g. MPICH1). .SS Downloading .sp The \fIPETSc for Python\fP package is available for download at the project website generously hosted by Bitbucket. You can use \fBcurl\fP or \fBwget\fP to get a release tarball. .INDENT 0.0 .IP \(bu 2 Using \fBcurl\fP: .INDENT 2.0 .INDENT 3.5 .sp .nf .ft C $ curl \-O https://bitbucket.org/petsc/petsc4py/petsc4py\-X.Y.tar.gz .ft P .fi .UNINDENT .UNINDENT .IP \(bu 2 Using \fBwget\fP: .INDENT 2.0 .INDENT 3.5 .sp .nf .ft C $ wget https://bitbucket.org/petsc/petsc4py/petsc4py\-X.Y.tar.gz .ft P .fi .UNINDENT .UNINDENT .UNINDENT .SS Building .sp After unpacking the release tarball: .INDENT 0.0 .INDENT 3.5 .sp .nf .ft C $ tar \-zxf petsc4py\-X.Y.tar.gz $ cd petsc4py\-X.Y .ft P .fi .UNINDENT .UNINDENT .sp the distribution is ready for building. .sp \fBNOTE:\fP .INDENT 0.0 .INDENT 3.5 \fBMac OS X\fP users employing a Python distribution built with \fBuniversal binaries\fP may need to set the environment variables \fBMACOSX_DEPLOYMENT_TARGET\fP, \fBSDKROOT\fP, and \fBARCHFLAGS\fP to appropriate values. As an example, assume your Mac is running \fBSnow Leopard\fP on a \fB64\-bit Intel\fP processor and you want to override the hard\-wired cross\-development SDK in Python configuration, your environment should be modified like this: .INDENT 0.0 .INDENT 3.5 .sp .nf .ft C $ export MACOSX_DEPLOYMENT_TARGET=10.6 $ export SDKROOT=/ $ export ARCHFLAGS=\(aq\-arch x86_64\(aq .ft P .fi .UNINDENT .UNINDENT .UNINDENT .UNINDENT .sp Some environment configuration is needed to inform the location of PETSc. You can set (using \fBsetenv\fP, \fBexport\fP or what applies to you shell or system) the environment variables \fBPETSC_DIR\fP, and \fBPETSC_ARCH\fP indicating where you have built/installed PETSc: .INDENT 0.0 .INDENT 3.5 .sp .nf .ft C $ export PETSC_DIR=/usr/local/petsc $ export PETSC_ARCH=arch\-linux2\-c\-opt .ft P .fi .UNINDENT .UNINDENT .sp Alternatively, you can edit the file \fBsetup.cfg\fP and provide the required information below the \fB[config]\fP section: .INDENT 0.0 .INDENT 3.5 .sp .nf .ft C [config] petsc_dir = /usr/local/petsc petsc_arch = arch\-linux2\-c\-opt \&... .ft P .fi .UNINDENT .UNINDENT .sp Finally, you can build the distribution by typing: .INDENT 0.0 .INDENT 3.5 .sp .nf .ft C $ python setup.py build .ft P .fi .UNINDENT .UNINDENT .SS Installing .sp After building, the distribution is ready for installation. .sp If you have root privileges (either by log\-in as the root user of by using \fBsudo\fP) and you want to install \fIPETSc for Python\fP in your system for all users, just do: .INDENT 0.0 .INDENT 3.5 .sp .nf .ft C $ python setup.py install .ft P .fi .UNINDENT .UNINDENT .sp The previous steps will install the \fBpetsc4py\fP package at standard location \fB\fIprefix\fP/lib/python\fIX\fP\&.\fIX\fP/site\-packages\fP\&. .sp If you do not have root privileges or you want to install \fIPETSc for Python\fP for your private use, just do: .INDENT 0.0 .INDENT 3.5 .sp .nf .ft C $ python setup.py install \-\-user .ft P .fi .UNINDENT .UNINDENT .SS Tutorial .sp XXX To be written ... Any contribution welcome! .SS Citations .sp If PETSc for Python been significant to a project that leads to an academic publication, please acknowledge that fact by citing the project. .INDENT 0.0 .IP \(bu 2 L. Dalcin, P. Kler, R. Paz, and A. Cosimo, \fIParallel Distributed Computing using Python\fP, Advances in Water Resources, 34(9):1124\-1139, 2011. \fI\%http://dx.doi.org/10.1016/j.advwatres.2011.04.013\fP .IP \(bu 2 S. Balay, S. Abhyankar, M.F. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W.D. Gropp, D. Karpeyev, D. Kaushik, M.G. Knepley, L. Curfman McInnes, K. Rupp, B.F. Smith, S. Zampini, H. Zhang, and H. Zhang, \fIPETSc Users Manual\fP, ANL\-95/11 \- Revision 3.7, 2016. \fI\%http://www.mcs.anl.gov/petsc/petsc\-current/docs/manual.pdf\fP .UNINDENT .SH AUTHOR Lisandro Dalcin .SH COPYRIGHT 2016, Lisandro Dalcin .\" Generated by docutils manpage writer. . petsc4py-3.7.0/docs/LICENSE.html0000644000175000001440000002215312711405143016762 0ustar dalcinlusers00000000000000 LICENSE: PETSc for Python

LICENSE: PETSc for Python

Author: Lisandro Dalcin
Contact: dalcinl@gmail.com

Copyright (c) 2016, Lisandro Dalcin. All rights reserved.

Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDER AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

petsc4py-3.7.0/docs/apiref/0000755000175000001440000000000012711405164016260 5ustar dalcinlusers00000000000000petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.IS.Type-class.html0000644000175000001440000002151512711405153024175 0ustar dalcinlusers00000000000000 petsc4py.PETSc.IS.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class IS :: Class Type
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Class Type

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  BLOCK = 'block'
  GENERAL = 'general'
  STRIDE = 'stride'
  __qualname__ = 'ISType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:47 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_viewer.png0000644000175000001440000000624212711405157024366 0ustar dalcinlusers00000000000000PNG  IHDRl]bKGD WIDATx}LS", C0b SʊX؅e#7;3Y-n,:{ puB ✴CkljMC>t{y?szN9=eQ xdj($>>>44!Ann.B)2|pdeeYYYe䘈V\._tO|||`h4XY,hdȩ¨;wi򶶶*TwɣGG_)s޽9s@xxի,Yr񤤤qC6l0}N FgbeeeYYmfJzoƽ{ewlr\ rfwڵpB>_PP`X^@&ŜD' G Nz/8}t}}Z~])VZPVVG}z~޽h1+ n~ytR\hEQ`0(4LVJ% #""jkk閟^`0wLr:_tmtrXXa2\9W}}}f11??ݮV_Wyz>$$5_l6k4[u:; J,++SRRN>m0曄uFV---}\c333KJJz{{;::>ꫯn߾˗/_޸qcooݻwsDw/Y;::zϞ=ݣjjjBCC(c@aa![~jܲe}}}f3EQ6M,s8Ě'Ea*;;JFb ŋ3#X_;t:B&xTnݺٮeѷnݚ*w&>A;ϙ3fg9bH l޼y&cF#q昹 JD1""""""""""""""""""""""""wűgΜZ(ՌpfSSS==v܉4YcΝnJpwwB,n|WVT`bl%,+ywFHDHD jjH###B~5֘k駲#GdbhtۻQ]gpr|!t_~Yy0"1$#=VNsжmχotE&mkg6`ܹӨJ7NӦի9̌;Y}>޺aǏsF^|9e짟^vMS[[VrD!BE390'1}ŊUU_Օ!6;88,w񇇇L,klDEID"Ft' ۽hk0w=w?7UTHD">7CfJJ'Lz}ڛo>qdb2<=S!AA!24n0z5k٩nST,'GK7mibЪ8Xt͖bC_t:>>&]>6Dk'Lܱc݋syHLLl6{ǎn&!tA @$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$"@$bh&w7ӳL&no|uG 8.++z"c"D"D"D"SxС ~>KHF'2\ -((pmx`6eYYY}}}Νs\xڵkk׮r[nŪl;wd2]~111eVW?wպm۶iOAJJRtKmmʕ+`߾}( > ,HJJJJJR(ި|͛N瘘w)Alr@ 6-11u~-[x j… T$ڰa!Ȁ)Č(VZPVV&j5477466NLNN7Nu PV 3,,_~q`0l3 petsc4py.PETSc.DMDA.InterpolationType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class DMDA :: Class InterpolationType
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Class InterpolationType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  Q0 = 0
  Q1 = 1
  __qualname__ = 'DMDAInterpolationType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:47 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_ao.png0000644000175000001440000000370112711405152023454 0ustar dalcinlusers00000000000000PNG  IHDRG[!bKGDvIDATxoLSWǿEL?2[DDRXICSi4)»A\ ML}bOeasD.YJZMœ 2d6< p 0EPN-ƝOrwzNsϽ=W" ÀaCgg'#ODHNN޽{ LU[tt",IWl&I?|a0rp9 &vCc툏Ǯ]pqs\d+֗dp\J',E4v܉^466uuuhkkN{s&(sxry#$0P(`۱f@VV8\`6;R^= 2rZ[[a0D1KBףU!## Ǐ,jaaz6mBRRz=xplٲ `톋LMMall jzrZϛaZaX`qـ:FCCC}6v;`0pEfX,ܺu 8<066jd22$411lyww7rPXADDA "l_wMRդT*ڵkb޽{_F;Bs6l؀d8;Ϸm&>V* 3<<͛70??S?''999vaE2甕!v؈b1&xppiiir ^LNN)))_p8j5qhZXVׯC@RR|mMM \.z{{qITTTWTT:ĥKP^^SNttĉ;33.=%A&333TSSCC*Ν;GDN[n$y"sr1P+W+;@29?9ml .jq_|߯$_-VV+<7lĆx$p _ @[oI.F΢ ͆kk1V]^&..+,D×_OEuR!3?FYa!bbĭÇp<7TUach?~!wuAPedHWDݪjVAoAFj*L6vdg?rg7ߑ()(@uy7H"e2 Ů_ϪYu1V \.Àa0mFEMBIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_type_10.png0000644000175000001440000000156412711405157024350 0ustar dalcinlusers00000000000000PNG  IHDR=$٥bKGD)IDATXc?L2 #dFFƁvv SQ4ڵp KAVBBWw܆^Z&80n,?XcGdE+ թ$wt|ggϬ la*; / ݜ _g``TKy o߸߸qcF9:uv?NNb0wlܿ߿ P'i+Wn~-+Wj5˗`ggdh//4lkʤ$l^..pT}5΂R"?pMP?ɉY090090Y{^cFmZxޓ'6lH x} 7wzH@T+O썍:&(&$4ZV ڎu7}Pu7|yҥ0'/_b ߿_x\E`ffFp87] :yaIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_type_5.png0000644000175000001440000000156412711405155024272 0ustar dalcinlusers00000000000000PNG  IHDR=$٥bKGD)IDATXc?L2 #dFFƁvv SQ4ڵp KAVBBWw܆^Z&80n,?XcGdE+ թ$wt|ggϬ la*; / ݜ _g``TKy o߸߸qcF9:uv?NNb0wlܿ߿ P'i+Wn~-+Wj5˗`ggdh//4lkʤ$l^..pT}5΂R"?pMP?ɉY090090Y{^cFmZxޓ'6lH x} 7wzH@T+O썍:&(&$4ZV ڎu7}Pu7|yҥ0'/_b ߿_x\E`ffFp87] :yaIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_type_6.png0000644000175000001440000000156412711405156024274 0ustar dalcinlusers00000000000000PNG  IHDR=$٥bKGD)IDATXc?L2 #dFFƁvv SQ4ڵp KAVBBWw܆^Z&80n,?XcGdE+ թ$wt|ggϬ la*; / ݜ _g``TKy o߸߸qcF9:uv?NNb0wlܿ߿ P'i+Wn~-+Wj5˗`ggdh//4lkʤ$l^..pT}5΂R"?pMP?ɉY090090Y{^cFmZxޓ'6lH x} 7wzH@T+O썍:&(&$4ZV ڎu7}Pu7|yҥ0'/_b ߿_x\E`ffFp87] :yaIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Sys-class.html0000644000175000001440000004321112711405157023521 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Sys
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Sys
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Class Sys

Instance Methods [hide private]
 
Print(type cls, *args, **kargs)
a new object with type S, a subtype of T
__new__(S, ...)
 
getDefaultComm(type cls)
 
getVersion(type cls, patch=False, devel=False, date=False, author=False)
 
getVersionInfo(type cls)
 
infoAllow(type cls, flag)
 
isFinalized(type cls)
 
isInitialized(type cls)
 
popErrorHandler(type cls)
 
pushErrorHandler(type cls, errhandler)
 
registerCitation(type cls, citation)
 
setDefaultComm(type cls, comm)
 
sleep(type cls, seconds=1)
 
splitOwnership(type cls, size, bsize=None, comm=None)
 
syncFlush(type cls, comm=None)
 
syncPrint(type cls, *args, **kargs)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:51 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_type.png0000644000175000001440000000156412711405152024043 0ustar dalcinlusers00000000000000PNG  IHDR=$٥bKGD)IDATXc?L2 #dFFƁvv SQ4ڵp KAVBBWw܆^Z&80n,?XcGdE+ թ$wt|ggϬ la*; / ݜ _g``TKy o߸߸qcF9:uv?NNb0wlܿ߿ P'i+Wn~-+Wj5˗`ggdh//4lkʤ$l^..pT}5΂R"?pMP?ɉY090090Y{^cFmZxޓ'6lH x} 7wzH@T+O썍:&(&$4ZV ڎu7}Pu7|yҥ0'/_b ߿_x\E`ffFp87] :yaIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Viewer.Format-class.html0000644000175000001440000003734712711405160025442 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Viewer.Format
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Viewer :: Class Format
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Class Format

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  ASCII_COMMON = 6
  ASCII_DENSE = 9
  ASCII_FACTOR_INFO = 16
  ASCII_IMPL = 3
  ASCII_INDEX = 8
  ASCII_INFO = 4
  ASCII_INFO_DETAIL = 5
  ASCII_LATEX = 17
  ASCII_MATHEMATICA = 2
  ASCII_MATLAB = 1
  ASCII_MATRIXMARKET = 10
  ASCII_PCICE = 14
  ASCII_PYTHON = 15
  ASCII_SYMMODU = 7
  ASCII_VTK = 11
  ASCII_VTK_CELL = 12
  ASCII_VTK_COORDS = 13
  ASCII_XML = 18
  BINARY_MATLAB = 26
  DEFAULT = 0
  DRAW_BASIC = 19
  DRAW_CONTOUR = 21
  DRAW_LG = 20
  DRAW_PORTS = 22
  HDF5_VIZ = 28
  NATIVE = 27
  NOFORMAT = 29
  VTK_VTR = 24
  VTK_VTS = 23
  VTK_VTU = 25
  __qualname__ = 'ViewerFormat'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:52 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_gamgtype.png0000644000175000001440000000276012711405155024701 0ustar dalcinlusers00000000000000PNG  IHDRe$cQbKGDIDATh}Lwǟ^An/*:`J 0A(AIpScdFK$F0LE6k72clȋ b12nՈ'sqh,ezQ֋" chff5 );z!=&h7kG ^s3 h3WkזL߸f*rL3#Ԡ5ԫg=0,2=vEE =Y\ljdgxXXj*E;U=I$ )ڬ :k͛ɟT?K";8^&XRٹL< Bq _(k<<j&XXaw-kHMt[v\HJJ{O{2\ r9jѼZWwqJvvvvA/qMx'Sg$&24חzXa6bBB*R2%/|dzW$J>zt\'O:U*kkWEDx{Eѱ1xg. v2ssTcXZMfVtspu%,D2ƅ @QZmuSSg 55zĵ+]]{z~[D%ͽx[ҥEEMMGΞ>e4DsƍFXZZT( ӖNt&)İ  ,OK رcc@`qqMպ:[hxW 'Dӥʶ6aa"R],< c'3):rd`hon( ;w*#cpxxwvkgeQݚqPR50)).+k`x+L"\S֯^f6Mbli6M)=OA0lHb=A -HM: Ν}j<vcETcgf Q)cCCg ?8A4;U*p\|rylf&TTTYhWoo+iܬAK_|~~qcJt􇸜5~F;ܡCr~~M3^Ԡ5&c/?1*FLרfL&=}￨@{jzQ֋Sr@2aIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_random.png0000644000175000001440000000452312711405156024344 0ustar dalcinlusers00000000000000PNG  IHDRQ[ iPbKGD IDATxPT? ,]@ӧ >[_9kQQc&K1cu1uJ\W| Ze7 B >㍂ MzmDMT&}H˯EEC(rּ;ýssܣBT@{@(UO?֓x3hР[,Oraܸsnoo!=t6QD %JG%:f3?0:I&ꫯ* fC4Ffy2D)xLbKK >(O&33T󉋋ի,cϞ= ;̙3;.nl. JJJ 22s2~xˌ3z-c}>;HOOWvl&//OٖϘ1c0 . LHHf\.lݺ#Gb0XlL<POUFjkk17L7znn.QRR¶mzٵkgϞ/RqIxW(//|wխ~͵[xQPP־v]Nz^XV %P=Z9jB1n8QSSwqa4ETT8r䈲WֻʿniJhh(ٳgHX,<#zDDwTT555=;wÇw?::hpddd ;233Yhj*WUUC(OcZn0Ν;gXs11k,Z|êU}M&6ӧO{pBRSSy摓CRR[lJ֭[Guuu5}2dm}ľ[kV;wǪUpnǺ}}!&&mLP%J@(UT2pS}yߋwe0RRR2eJk;h:8^F妨mTP%J@(UTP%J@(UTP%J@(UTP%J@(UTP%J@(UTP%J@(Uz # oQ^^'رc8qbΉD޼~[7e:::} |2a)IIn7aM%8.cAPP%J@()5FcX%'cЕOhn25@ L|~jN *"bHlU7Bڷ}a휃&JI!dLvx@aZ??Z Q++c% eټiF? xz]vt}DΟnT%'oU5?8#aorTC,0cr1F8m/H4Khmk"1>hq8Xd2hGƆ Mݮɓڿٜ/MM~=ط#<47CJIa̙ 뉟>/u&8b c򊊔2'& `ٓO`JJBKkG2˗1IgRU]s1qܸeu 5jk1FEuoBd$?74p1#F(ic9_Wkʼ~]iʧ[M:_r:Iش sr29xz3Qaa|sݭReW!AAp%`c ZZ;r^ KN'[zb̻vO>E?MKL^@ͦǦ/hhjBP&ii?+W'f ?޴<;wRs"""xo&w>az+5k<3o+WzZ7Ƿ}]O̡ +_f?N @aa!/VԾTP%J@(UTP%x ro_ {y?7Tnzt8O<ֿ"##}Or7^X$Jph?|~AIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_infotype.png0000644000175000001440000000215612711405154024717 0ustar dalcinlusers00000000000000PNG  IHDRT$+WbKGD#IDAThc?HL퀁?HNNfddh 022&''#cffր߿p.!.+!a;N%8q/˂ROoeWE^V<2ިG* w?ƣ ; 0х7p %KG!x oۆK={?{fa300 P1 <ӿ$$p)dgdgg``;@$43,ݶM30Pήk gg?'֊˸Qy o߸߸qcF9:uv?NNb!T(6|Ѣ }xb{Bds۟zujSIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_format.png0000644000175000001440000000162112711405160024343 0ustar dalcinlusers00000000000000PNG  IHDRI$J{bKGDFIDATXc?0LQ Q $''322jjj/^{oLLC>׮]  Ŀd%$,tumd'/_t߿pALuzz+.jջw/-EXAh`)Ce@-Z(%E]`<1~s zyzI#yz>|P[+bo/V;3=yR6l up7o-^^ֵSBLrax8KǼy 11 ߿|Ge``ioթKOر!{-.,4PWԒ%&ٳEE-gׯF7o)*4',a``xw/fkeG;ϊ;&)說6ee-ٺ ݝ :;ח86;ߟOllWT^.)""+.dۛ7" Nf99RJT4*-#Ҳ2)$UU RRYY RR6..dy,1 ssRUVBs{roCmhQ M5tҥ01A|)7&&=~r3333Q\ doC b`ueuIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Error-class.html0000644000175000001440000003342712711405153024040 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Error
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Error
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Class Error

Instance Methods [hide private]
 
__init__(self, int ierr=0)
x.__init__(...) initializes x; see help(type(x)) for signature
 
__nonzero__(self)
 
__repr__(self)
 
__str__(self)

Inherited from exceptions.RuntimeError: __new__

Inherited from exceptions.BaseException: __delattr__, __getattribute__, __getitem__, __getslice__, __reduce__, __setattr__, __setstate__, __unicode__

Inherited from object: __format__, __hash__, __reduce_ex__, __sizeof__, __subclasshook__

Class Variables [hide private]
  __qualname__ = 'Error'
  _traceback_ = []
Properties [hide private]

Inherited from exceptions.BaseException: args, message

Inherited from object: __class__

Method Details [hide private]

__init__(self, int ierr=0)
(Constructor)

 
x.__init__(...) initializes x; see help(type(x)) for signature
Overrides: object.__init__

__repr__(self)
(Representation operator)

 
Overrides: object.__repr__

__str__(self)
(Informal representation operator)

 
Overrides: object.__str__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:47 2016 http://epydoc.sourceforge.net
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Partitioner
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Class Partitioner

Nested Classes [hide private]
  Type
Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
create(self, comm=None)
 
destroy(self)
 
getType(self)
 
setFromOptions(self)
 
setShellPartition(self, numProcs, sizes=None, points=None)
 
setType(self, part_type)
 
setUp(self)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setOptionsPrefix, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getType(self)

 
Overrides: Object.getType

setFromOptions(self)

 
Overrides: Object.setFromOptions

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_dmda.png0000644000175000001440000000437712711405153023775 0ustar dalcinlusers00000000000000PNG  IHDRI|bKGDIDATxkLg(&.TZ Xc)`Q6ֵf 65#5&xYsdPZ+[+jEu&[:;ЩNs~釙3=̫g0 P FM&MMM?@V^(YBtOׯim H$7FM?fggU*֭[׮][PPpE7[,ab4x\ƑDzWd/^ /O?x P*%%%KqiiiW\1~W,Ao뭹Fa)k֬QTlKKKFFp8jf3 2˗&^tLǏ Rz @||<dBZmzz:-++nK ̼qStznDN׭[fFX,ƧƼ<;;[R`0***N' t:p#,9LFUVgs(p{D"NII 0q:0lpCM5dHG{ ĉ۷o{澩$"l}DrnQFM5nQFM5nQFM5d7 ZWW(ݽe˖kr6M-Aӽ^bQog@#GmbȈ"vؑ\YYIGFF OB3$DF-- _"8&7jnA߂CZl6[PO+ᖘMF8ܨ p&7jܨ p&7jܨ p&7jnƙ߼y!t:]aa!yoWۼyٳgN t:NVƽ{=~FصoO '1%<IJNv8/9HJ,6?`UWՆW].laΙޑ#fC!ƌeǯgJ : qa`fo0??gcw-K Ga)rDcͲ`(_vkza^X JO_IՅf_IMٰ"h|v -- 8 +Rd"wFD"mWAwz{x%czmjJ&C_$z2>>J9и''3wuu!n0K$tvzx** "\u!pCISRO,uWe$ݻ6;ߏ~QYنAAp,;ͦvmn=>-*J&9wn[N,/qTݵks䶣 Ha珴2\)_Zk:;EgggarC@ 9ei-p>IM5n165B&Tװz'{X1(쿟 {{{[6mfxd$fQo7:`IENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.TS.ProblemType-class.html0000644000175000001440000002044612711405157025537 0ustar dalcinlusers00000000000000 petsc4py.PETSc.TS.ProblemType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class TS :: Class ProblemType
[hide private]
[frames] | no frames]

Class ProblemType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  LINEAR = 0
  NONLINEAR = 1
  __qualname__ = 'TSProblemType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:51 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_scatter.png0000644000175000001440000000451112711405156024526 0ustar dalcinlusers00000000000000PNG  IHDRK[;xqbKGDIDATx}PT>tE$c 5Xe!48ihsuEBhLǔbVJ_OJG쎲/FƁmniy3wf=|s{ !aw, 4Yyhoo?ʕ+}Y~%44 &x?@xTwMBx ;::d[qqfoh}, 4Yh$P]Vkk+&1c0x`y|Mt8t:u:Cj.]?̱cĉfHMM3[AAw̙3ߝfx}(=a0Zs=5tٽ{7'Ni ,W^ŋ> UϬBrrrQ]b2(,,T1rH  . ~nL&Æ #$$Ʉ\"""0 ̙3fƍ\{Wd577@BBB Jx׮]TTTP^^jeڵi, gϞXV:DNN7or*++eTUUРV~۳}qqIMMM==zTza )v]!DLLWOEBBP:uJ w/K/[Z5dBCClL4#f{#,,۾`\.Wƪьj5k,#w|!..M0g֝&KM, 4Yx]_45[Ĕ)S(--GbPRRҧ­0*#33S 9]l}^, 4Yh$dIɒ@%&KM, 4Yh$dIɒ@%&KM, 4Yh$dIɒ@%&KM, bс%$`+"22NUdmSkj*i nBJ?[ܱZ;vpiF#ccc+`޲Ʀ&:`x,'!_}IbN&ee|i>v<ŋE;/ƌA8YR–U>l?r>W_exh(_/T7.[ƌt|n [/_/F$͚-(`s'㬯'*"BIIld$u:GK[11Rם?O F R~t>YB3ut?3 ΟWmO+e+1lC`/+Cl#GڳG|Sr%Gp9s$+6mbfFNeRpPpd\ʯn7r[P\˺hNMO̔[ଯEV\kzD>kodoJi2y") K`~%} ?w.aal\!Ȭlb}̜ Help
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PETSc for Python
 
[hide private]
[frames] | no frames]

API Documentation

This document contains the API (Application Programming Interface) documentation for PETSc for Python. Documentation for the Python objects defined by the project is divided into separate pages for each package, module, and class. The API documentation also includes two pages containing information about the project as a whole: a trees page, and an index page.

Object Documentation

Each Package Documentation page contains:

  • A description of the package.
  • A list of the modules and sub-packages contained by the package.
  • A summary of the classes defined by the package.
  • A summary of the functions defined by the package.
  • A summary of the variables defined by the package.
  • A detailed description of each function defined by the package.
  • A detailed description of each variable defined by the package.

Each Module Documentation page contains:

  • A description of the module.
  • A summary of the classes defined by the module.
  • A summary of the functions defined by the module.
  • A summary of the variables defined by the module.
  • A detailed description of each function defined by the module.
  • A detailed description of each variable defined by the module.

Each Class Documentation page contains:

  • A class inheritance diagram.
  • A list of known subclasses.
  • A description of the class.
  • A summary of the methods defined by the class.
  • A summary of the instance variables defined by the class.
  • A summary of the class (static) variables defined by the class.
  • A detailed description of each method defined by the class.
  • A detailed description of each instance variable defined by the class.
  • A detailed description of each class (static) variable defined by the class.

Project Documentation

The Trees page contains the module and class hierarchies:

  • The module hierarchy lists every package and module, with modules grouped into packages. At the top level, and within each package, modules and sub-packages are listed alphabetically.
  • The class hierarchy lists every class, grouped by base class. If a class has more than one base class, then it will be listed under each base class. At the top level, and under each base class, classes are listed alphabetically.

The Index page contains indices of terms and identifiers:

  • The term index lists every term indexed by any object's documentation. For each term, the index provides links to each place where the term is indexed.
  • The identifier index lists the (short) name of every package, module, class, method, function, variable, and parameter. For each identifier, the index provides a short description, and a link to its documentation.

The Table of Contents

The table of contents occupies the two frames on the left side of the window. The upper-left frame displays the project contents, and the lower-left frame displays the module contents:

Project
Contents
...		 API
Documentation
Frame
Module
Contents
 
...
 

The project contents frame contains a list of all packages and modules that are defined by the project. Clicking on an entry will display its contents in the module contents frame. Clicking on a special entry, labeled "Everything," will display the contents of the entire project.

The module contents frame contains a list of every submodule, class, type, exception, function, and variable defined by a module or package. Clicking on an entry will display its documentation in the API documentation frame. Clicking on the name of the module, at the top of the frame, will display the documentation for the module itself.

The "frames" and "no frames" buttons below the top navigation bar can be used to control whether the table of contents is displayed or not.

The Navigation Bar

A navigation bar is located at the top and bottom of every page. It indicates what type of page you are currently viewing, and allows you to go to related pages. The following table describes the labels on the navigation bar. Note that not some labels (such as [Parent]) are not displayed on all pages.

Label Highlighted when... Links to...
[Parent] (never highlighted) the parent of the current package
[Package] viewing a package the package containing the current object
[Module] viewing a module the module containing the current object
[Class] viewing a class the class containing the current object
[Trees] viewing the trees page the trees page
[Index] viewing the index page the index page
[Help] viewing the help page the help page

The "show private" and "hide private" buttons below the top navigation bar can be used to control whether documentation for private objects is displayed. Private objects are usually defined as objects whose (short) names begin with a single underscore, but do not end with an underscore. For example, "_x", "__pprint", and "epydoc.epytext._tokenize" are private objects; but "re.sub", "__init__", and "type_" are not. However, if a module defines the "__all__" variable, then its contents are used to decide which objects are private.

A timestamp below the bottom navigation bar indicates when each page was last updated.

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:46 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc._DMDA_Vec_array-class.html0000644000175000001440000003072112711405160025576 0ustar dalcinlusers00000000000000 petsc4py.PETSc._DMDA_Vec_array
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PETSc for Python
Package petsc4py :: Module PETSc :: Class _DMDA_Vec_array
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Class _DMDA_Vec_array

Instance Methods [hide private]
 
__delitem__(y)
del x[y]
 
__enter__(self)
 
__exit__(self, *exc)
 
__getitem__(y)
x[y]
a new object with type S, a subtype of T
__new__(S, ...)
 
__setitem__(i, y)
x[i]=y

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  array
  shape
  sizes
  starts
  strides

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:52 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.KSP.Type-class.html0000644000175000001440000005514012711405154024321 0ustar dalcinlusers00000000000000 petsc4py.PETSc.KSP.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class KSP :: Class Type
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[frames] | no frames]

Class Type

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  BCGS = 'bcgs'
  BCGSL = 'bcgsl'
  BICG = 'bicg'
  CG = 'cg'
  CGLS = 'cgls'
  CGNE = 'cgne'
  CGS = 'cgs'
  CHEBYSHEV = 'chebyshev'
  CR = 'cr'
  DGMRES = 'dgmres'
  FBCGS = 'fbcgs'
  FBCGSR = 'fbcgsr'
  FCG = 'fcg'
  FGMRES = 'fgmres'
  GCR = 'gcr'
  GLTR = 'gltr'
  GMRES = 'gmres'
  GROPPCG = 'groppcg'
  IBCGS = 'ibcgs'
  LCD = 'lcd'
  LGMRES = 'lgmres'
  LSQR = 'lsqr'
  MINRES = 'minres'
  NASH = 'nash'
  PGMRES = 'pgmres'
  PIPECG = 'pipecg'
  PIPECGRR = 'pipecgrr'
  PIPECR = 'pipecr'
  PIPEFCG = 'pipefcg'
  PIPEFGMRES = 'pipefgmres'
  PIPEGCR = 'pipegcr'
  PREONLY = 'preonly'
  PYTHON = 'python'
  QCG = 'qcg'
  RICHARDSON = 'richardson'
  STCG = 'stcg'
  SYMMLQ = 'symmlq'
  TCQMR = 'tcqmr'
  TFQMR = 'tfqmr'
  TSIRM = 'tsirm'
  __qualname__ = 'KSPType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Vec
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Class Vec

Nested Classes [hide private]
  Option
  Type
Instance Methods [hide private]
 
__abs__() <==> abs(x)
 
__add__(y)
x+y
 
__delitem__(y)
del x[y]
 
__div__(y)
x/y
 
__enter__(self)
 
__exit__(self, *exc)
 
__getitem__(y)
x[y]
 
__iadd__(y)
x+=y
 
__idiv__(y)
x/=y
 
__imul__(y)
x*=y
 
__isub__(y)
x-=y
 
__itruediv__(y)
x/=y
 
__mul__(y)
x*y
 
__neg__()
-x
a new object with type S, a subtype of T
__new__(S, ...)
 
__pos__()
+x
 
__radd__(y)
y+x
 
__rdiv__(y)
y/x
 
__rmul__(y)
y*x
 
__rsub__(y)
y-x
 
__rtruediv__(y)
y/x
 
__setitem__(i, y)
x[i]=y
 
__sub__(y)
x-y
 
__truediv__(y)
x/y
 
abs(self)
 
assemble(self)
 
assemblyBegin(self)
 
assemblyEnd(self)
 
axpby(self, alpha, beta, Vec y)
 
axpy(self, alpha, Vec x)
 
aypx(self, alpha, Vec x)
 
chop(self, tol)
 
conjugate(self)
 
copy(self, Vec result=None)
 
create(self, comm=None)
 
createGhost(self, ghosts, size, bsize=None, comm=None)
 
createGhostWithArray(self, ghosts, array, size=None, bsize=None, comm=None)
 
createMPI(self, size, bsize=None, comm=None)
 
createNest(self, vecs, isets=None, comm=None)
 
createSeq(self, size, bsize=None, comm=None)
 
createShared(self, size, bsize=None, comm=None)
 
createWithArray(self, array, size=None, bsize=None, comm=None)
 
destroy(self)
 
dot(self, Vec vec)
 
dotBegin(self, Vec vec)
 
dotEnd(self, Vec vec)
 
duplicate(self, array=None)
 
equal(self, Vec vec)
 
exp(self)
 
getArray(self, readonly=False)
 
getBlockSize(self)
 
getBuffer(self, readonly=False)
 
getCUDAHandle(self, mode=None)
 
getLocalSize(self)
 
getNestSubVecs(self)
 
getOptionsPrefix(self)
 
getOwnershipRange(self)
 
getOwnershipRanges(self)
 
getSize(self)
 
getSizes(self)
 
getSubVector(self, IS iset, Vec subvec=None)
 
getType(self)
 
getValue(self, index)
 
getValues(self, indices, values=None)
 
ghostUpdate(self, addv=None, mode=None)
 
ghostUpdateBegin(self, addv=None, mode=None)
 
ghostUpdateEnd(self, addv=None, mode=None)
 
isaxpy(self, IS idx, alpha, Vec x)
 
isset(self, IS idx, alpha)
 
load(self, Viewer viewer)
 
localForm(self)
Intended for use in context manager:
 
log(self)
 
mDot(self, vecs, out=None)
 
mDotBegin(self, vecs, out=None)
 
mDotEnd(self, vecs, out=None)
 
max(self)
 
maxPointwiseDivide(self, Vec vec)
 
maxpy(self, alphas, vecs)
 
min(self)
 
mtDot(self, vecs, out=None)
 
mtDotBegin(self, vecs, out=None)
 
mtDotEnd(self, vecs, out=None)
 
norm(self, norm_type=None)
 
normBegin(self, norm_type=None)
 
normEnd(self, norm_type=None)
 
normalize(self)
 
permute(self, IS order, invert=False)
 
placeArray(self, array)
 
pointwiseDivide(self, Vec x, Vec y)
 
pointwiseMax(self, Vec x, Vec y)
 
pointwiseMaxAbs(self, Vec x, Vec y)
 
pointwiseMin(self, Vec x, Vec y)
 
pointwiseMult(self, Vec x, Vec y)
 
reciprocal(self)
 
resetArray(self, force=False)
 
restoreCUDAHandle(self, handle, mode='rw')
 
restoreSubVector(self, IS iset, Vec subvec)
 
scale(self, alpha)
 
set(self, alpha)
 
setArray(self, array)
 
setBlockSize(self, bsize)
 
setFromOptions(self)
 
setLGMap(self, LGMap lgmap)
 
setMPIGhost(self, ghosts)
Alternative to createGhost()
 
setNestSubVecs(self, sx, idxm=None)
 
setOption(self, option, flag)
 
setOptionsPrefix(self, prefix)
 
setRandom(self, Random random=None)
 
setSizes(self, size, bsize=None)
 
setType(self, vec_type)
 
setUp(self)
 
setValue(self, index, value, addv=None)
 
setValueLocal(self, index, value, addv=None)
 
setValues(self, indices, values, addv=None)
 
setValuesBlocked(self, indices, values, addv=None)
 
setValuesBlockedLocal(self, indices, values, addv=None)
 
setValuesLocal(self, indices, values, addv=None)
 
shift(self, alpha)
 
sqrtabs(self)
 
strideGather(self, field, Vec vec, addv=None)
 
strideMax(self, field)
 
strideMin(self, field)
 
strideNorm(self, field, norm_type=None)
 
strideScale(self, field, alpha)
 
strideScatter(self, field, Vec vec, addv=None)
 
strideSum(self, field)
 
sum(self)
 
swap(self, Vec vec)
 
tDot(self, Vec vec)
 
tDotBegin(self, Vec vec)
 
tDotEnd(self, Vec vec)
 
view(self, Viewer viewer=None)
 
waxpy(self, alpha, Vec x, Vec y)
 
zeroEntries(self)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  __array_interface__
  array
  array_r
Vec array (read-only)
  array_w
Vec array (writable)
  block_size
  buffer
  buffer_r
Vec buffer (read-only)
  buffer_w
Vec buffer (writable)
  local_size
  owner_range
  owner_ranges
  size
  sizes

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getOptionsPrefix(self)

 
Overrides: Object.getOptionsPrefix

getType(self)

 
Overrides: Object.getType

setFromOptions(self)

 
Overrides: Object.setFromOptions

setOptionsPrefix(self, prefix)

 
Overrides: Object.setOptionsPrefix

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:51 2016 http://epydoc.sourceforge.net
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PETSc for Python
Package petsc4py :: Module PETSc :: Class NormType
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Class NormType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  FRB = 2
  FROBENIUS = 2
  INF = 3
  INFINITY = 3
  MAX = 3
  N1 = 0
  N12 = 4
  N2 = 1
  NORM_1 = 0
  NORM_1_AND_2 = 4
  NORM_2 = 1
  NORM_FROBENIUS = 2
  NORM_INFINITY = 3
  NORM_MAX = 3
  __qualname__ = 'NormType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:49 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.DMPlex-class.html0000644000175000001440000016201712711405153024076 0ustar dalcinlusers00000000000000 petsc4py.PETSc.DMPlex
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PETSc for Python
Package petsc4py :: Module PETSc :: Class DMPlex
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Class DMPlex

Nested Classes [hide private]

Inherited from DM: BoundaryType, Type

Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
computeCellGeometryFVM(self, cell)
 
create(self, comm=None)
 
createBoxMesh(self, dim, interpolate=True, comm=None)
 
createCGNS(self, cgid, interpolate=True, comm=None)
 
createCGNSFromFile(self, filename, interpolate=True, comm=None)
 
createCoarsePointIS(self)
 
createCohesiveSubmesh(self, hasLagrange, value)
 
createCubeBoundary(self, lower, upper, faces)
 
createExodus(self, exoid, interpolate=True, comm=None)
 
createExodusFromFile(self, filename, interpolate=True, comm=None)
 
createFromCellList(self, dim, cells, coords, interpolate=True, comm=None)
 
createGmsh(self, Viewer viewer, interpolate=True, comm=None)
 
createHexBoxMesh(self, numcells, boundary_type=None, comm=None)
 
createPointNumbering(self)
 
createSection(self, numComp, numDof, bcField=None, bcComps=None, bcPoints=None, IS perm=None)
 
createSquareBoundary(self, lower, upper, edges)
 
distribute(self, overlap=0)
 
distributeField(self, SF sf, Section sec, Vec vec, Section newsec=None, Vec newvec=None)
 
distributeOverlap(self, overlap=0)
 
generate(self, DMPlex boundary, name=None, interpolate=True)
 
getCellNumbering(self)
 
getChart(self)
 
getCone(self, p)
 
getConeOrientation(self, p)
 
getConeSize(self, p)
 
getDepth(self)
 
getDepthStratum(self, svalue)
 
getHeightStratum(self, svalue)
 
getJoin(self, points)
 
getMaxSizes(self)
 
getMeet(self, points)
 
getOrdering(self, otype)
 
getPartitioner(self)
 
getRefinementLimit(self)
 
getRefinementUniform(self)
 
getSupport(self, p)
 
getSupportSize(self, p)
 
getTransitiveClosure(self, p, useCone=True)
 
getVertexNumbering(self)
 
insertCone(self, p, conePos, conePoint)
 
insertConeOrientation(self, p, conePos, coneOrientation)
 
markBoundaryFaces(self, label)
 
orient(self)
 
permute(self, IS perm)
 
setAdjacencyUseClosure(self, useClosure=True)
 
setAdjacencyUseCone(self, useCone=True)
 
setChart(self, pStart, pEnd)
 
setCone(self, p, cone, orientation=None)
 
setConeOrientation(self, p, orientation)
 
setConeSize(self, p, size)
 
setRefinementLimit(self, refinementLimit)
 
setRefinementUniform(self, refinementUniform=True)
 
setSupport(self, p, supp)
 
setSupportSize(self, p, size)
 
setTetGenOptions(self, opts)
 
setTriangleOptions(self, opts)
 
stratify(self)
 
symmetrize(self)
 
vecGetClosure(self, Section sec, Vec vec, p)

Inherited from DM: clearLabelStratum, clearLabelValue, clone, coarsen, coarsenHierarchy, convert, createAggregates, createDefaultSF, createGlobalVec, createGlobalVector, createInjection, createInterpolation, createLabel, createLocalVec, createLocalVector, createMat, createMatrix, destroy, getAppCtx, getBlockSize, getCoordinateDM, getCoordinateSection, getCoordinates, getCoordinatesLocal, getDefaultGlobalSection, getDefaultSF, getDefaultSection, getDimension, getLGMap, getLabelIdIS, getLabelName, getLabelOutput, getLabelSize, getLabelValue, getMatrix, getNumLabels, getPointSF, getStratumIS, getStratumSize, getType, globalToLocal, hasLabel, localToGlobal, localToLocal, refine, refineHierarchy, removeLabel, setAppCtx, setCoordinates, setCoordinatesLocal, setDefaultGlobalSection, setDefaultSection, setDimension, setFromOptions, setLabelOutput, setLabelValue, setMatType, setOptionsPrefix, setPointSF, setType, setUp, setVecType, view

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

create(self, comm=None)

 
Overrides: DM.create

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:47 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.PC.GAMGType-class.html0000644000175000001440000002155112711405155024622 0ustar dalcinlusers00000000000000 petsc4py.PETSc.PC.GAMGType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class PC :: Class GAMGType
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Class GAMGType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  AGG = 'agg'
  CLASSICAL = 'classical'
  GEO = 'geo'
  __qualname__ = 'PCGAMGType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:49 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.DMComposite-class.html0000644000175000001440000006561612711405153025137 0ustar dalcinlusers00000000000000 petsc4py.PETSc.DMComposite
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PETSc for Python
Package petsc4py :: Module PETSc :: Class DMComposite
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Class DMComposite

Nested Classes [hide private]

Inherited from DM: BoundaryType, Type

Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
addDM(self, DM dm, *args)
Add DM to composite
 
create(self, comm=None)
 
gather(self, Vec gvec, imode, lvecs)
Gather split local vectors into coupled global vector
 
getAccess(self, Vec gvec, locs=None)
Get access to specified parts of global vector.
 
getEntries(self)
Get tuple of sub-DMs contained in the DMComposite
 
getGlobalISs(self)
 
getLGMaps(self)
 
getLocalISs(self)
 
getNumber(self)
Get number of sub-DMs contained in the DMComposite
 
getNumberDM(self)
Get number of sub-DMs contained in the DMComposite
 
scatter(self, Vec gvec, lvecs)
Scatter coupled global vector into split local vectors

Inherited from DM: clearLabelStratum, clearLabelValue, clone, coarsen, coarsenHierarchy, convert, createAggregates, createDefaultSF, createGlobalVec, createGlobalVector, createInjection, createInterpolation, createLabel, createLocalVec, createLocalVector, createMat, createMatrix, destroy, getAppCtx, getBlockSize, getCoordinateDM, getCoordinateSection, getCoordinates, getCoordinatesLocal, getDefaultGlobalSection, getDefaultSF, getDefaultSection, getDimension, getLGMap, getLabelIdIS, getLabelName, getLabelOutput, getLabelSize, getLabelValue, getMatrix, getNumLabels, getPointSF, getStratumIS, getStratumSize, getType, globalToLocal, hasLabel, localToGlobal, localToLocal, refine, refineHierarchy, removeLabel, setAppCtx, setCoordinates, setCoordinatesLocal, setDefaultGlobalSection, setDefaultSection, setDimension, setFromOptions, setLabelOutput, setLabelValue, setMatType, setOptionsPrefix, setPointSF, setType, setUp, setVecType, view

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

create(self, comm=None)

 
Overrides: DM.create

getAccess(self, Vec gvec, locs=None)

 

Get access to specified parts of global vector.

Use via 'with' context manager (PEP 343).

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:47 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.PC.Side-class.html0000644000175000001440000002230512711405156024130 0ustar dalcinlusers00000000000000 petsc4py.PETSc.PC.Side
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PETSc for Python
Package petsc4py :: Module PETSc :: Class PC :: Class Side
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Class Side

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  L = 0
  LEFT = 0
  R = 1
  RIGHT = 1
  S = 2
  SYMMETRIC = 2
  __qualname__ = 'PCSide'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/epydoc.css0000644000175000001440000003722712711405152020265 0ustar dalcinlusers00000000000000 /* Epydoc CSS Stylesheet * * This stylesheet can be used to customize the appearance of epydoc's * HTML output. * */ /* Default Colors & Styles * - Set the default foreground & background color with 'body'; and * link colors with 'a:link' and 'a:visited'. * - Use bold for decision list terms. * - The heading styles defined here are used for headings *within* * docstring descriptions. All headings used by epydoc itself use * either class='epydoc' or class='toc' (CSS styles for both * defined below). */ body { background: #ffffff; color: #000000; } p { margin-top: 0.5em; margin-bottom: 0.5em; } a:link { color: #0000ff; } a:visited { color: #204080; } dt { font-weight: bold; } h1 { font-size: +140%; font-style: italic; font-weight: bold; } h2 { font-size: +125%; font-style: italic; font-weight: bold; } h3 { font-size: +110%; font-style: italic; font-weight: normal; } code { font-size: 100%; } /* N.B.: class, not pseudoclass */ a.link { font-family: monospace; } /* Page Header & Footer * - The standard page header consists of a navigation bar (with * pointers to standard pages such as 'home' and 'trees'); a * breadcrumbs list, which can be used to navigate to containing * classes or modules; options links, to show/hide private * variables and to show/hide frames; and a page title (using *

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This row contains a section title (marked by * 'span.table-header') as well as a show/hide private link * (marked by 'span.options', defined above). * - Summary tables that contain user-defined groups mark those * groups using 'group header' rows. */ td.table-header { background: #70b0ff; color: #000000; border: 1px solid #608090; } td.table-header table { color: #000000; } td.table-header table a:link { color: #0000ff; } td.table-header table a:visited { color: #204080; } span.table-header { font-size: 120%; font-weight: bold; } th.group-header { background: #c0e0f8; color: #000000; text-align: left; font-style: italic; font-size: 115%; border: 1px solid #608090; } /* Summary Tables (functions, variables, etc) * - Each object is described by a single row of the table with * two cells. The left cell gives the object's type, and is * marked with 'code.summary-type'. The right cell gives the * object's name and a summary description. * - CSS styles for the table's header and group headers are * defined above, under 'Table Headers' */ table.summary { border-collapse: collapse; background: #e8f0f8; color: #000000; border: 1px solid #608090; margin-bottom: 0.5em; } td.summary { border: 1px solid #608090; } code.summary-type { font-size: 85%; } table.summary a:link { color: #0000ff; } table.summary a:visited { color: #204080; } /* Details Tables (functions, variables, etc) * - Each object is described in its own div. * - A single-row summary table w/ table-header is used as * a header for each details section (CSS style for table-header * is defined above, under 'Table Headers'). */ table.details { border-collapse: collapse; background: #e8f0f8; color: #000000; border: 1px solid #608090; margin: .2em 0 0 0; } table.details table { color: #000000; } table.details a:link { color: #0000ff; } table.details a:visited { color: #204080; } /* Fields */ dl.fields { margin-left: 2em; margin-top: 1em; margin-bottom: 1em; } dl.fields dd ul { margin-left: 0em; padding-left: 0em; } dl.fields dd ul li ul { margin-left: 2em; padding-left: 0em; } div.fields { margin-left: 2em; } div.fields p { margin-bottom: 0.5em; } /* Index tables (identifier index, term index, etc) * - link-index is used for indices containing lists of links * (namely, the identifier index & term index). * - index-where is used in link indices for the text indicating * the container/source for each link. * - metadata-index is used for indices containing metadata * extracted from fields (namely, the bug index & todo index). */ table.link-index { border-collapse: collapse; background: #e8f0f8; color: #000000; border: 1px solid #608090; } td.link-index { border-width: 0px; } table.link-index a:link { color: #0000ff; } table.link-index a:visited { color: #204080; } span.index-where { font-size: 70%; } table.metadata-index { border-collapse: collapse; background: #e8f0f8; color: #000000; border: 1px solid #608090; margin: .2em 0 0 0; } td.metadata-index { border-width: 1px; border-style: solid; } table.metadata-index a:link { color: #0000ff; } table.metadata-index a:visited { color: #204080; } /* Function signatures * - sig* is used for the signature in the details section. * - .summary-sig* is used for the signature in the summary * table, and when listing property accessor functions. * */ .sig-name { color: #006080; } .sig-arg { color: #008060; } .sig-default { color: #602000; } .summary-sig { font-family: monospace; } .summary-sig-name { color: #006080; font-weight: bold; } table.summary a.summary-sig-name:link { color: #006080; font-weight: bold; } table.summary a.summary-sig-name:visited { color: #006080; font-weight: bold; } .summary-sig-arg { color: #006040; } .summary-sig-default { color: #501800; } /* Subclass list */ ul.subclass-list { display: inline; } ul.subclass-list li { display: inline; } /* To render variables, classes etc. like functions */ table.summary .summary-name { color: #006080; font-weight: bold; font-family: monospace; } table.summary a.summary-name:link { color: #006080; font-weight: bold; font-family: monospace; } table.summary a.summary-name:visited { color: #006080; font-weight: bold; font-family: monospace; } /* Variable values * - In the 'variable details' sections, each varaible's value is * listed in a 'pre.variable' box. The width of this box is * restricted to 80 chars; if the value's repr is longer than * this it will be wrapped, using a backslash marked with * class 'variable-linewrap'. If the value's repr is longer * than 3 lines, the rest will be ellided; and an ellipsis * marker ('...' marked with 'variable-ellipsis') will be used. * - If the value is a string, its quote marks will be marked * with 'variable-quote'. * - If the variable is a regexp, it is syntax-highlighted using * the re* CSS classes. */ pre.variable { padding: .5em; margin: 0; background: #dce4ec; color: #000000; border: 1px solid #708890; } .variable-linewrap { color: #604000; font-weight: bold; } .variable-ellipsis { color: #604000; font-weight: bold; } .variable-quote { color: #604000; font-weight: bold; } .variable-group { color: #008000; font-weight: bold; } .variable-op { color: #604000; font-weight: bold; } .variable-string { color: #006030; } .variable-unknown { color: #a00000; font-weight: bold; } .re { color: #000000; } .re-char { color: #006030; } .re-op { color: #600000; } .re-group { color: #003060; } .re-ref { color: #404040; } /* Base tree * - Used by class pages to display the base class hierarchy. */ pre.base-tree { font-size: 80%; margin: 0; } /* Frames-based table of contents headers * - Consists of two frames: one for selecting modules; and * the other listing the contents of the selected module. * - h1.toc is used for each frame's heading * - h2.toc is used for subheadings within each frame. */ h1.toc { text-align: center; font-size: 105%; margin: 0; font-weight: bold; padding: 0; } h2.toc { font-size: 100%; font-weight: bold; margin: 0.5em 0 0 -0.3em; } /* Syntax Highlighting for Source Code * - doctest examples are displayed in a 'pre.py-doctest' block. * If the example is in a details table entry, then it will use * the colors specified by the 'table pre.py-doctest' line. * - Source code listings are displayed in a 'pre.py-src' block. * Each line is marked with 'span.py-line' (used to draw a line * down the left margin, separating the code from the line * numbers). Line numbers are displayed with 'span.py-lineno'. * The expand/collapse block toggle button is displayed with * 'a.py-toggle' (Note: the CSS style for 'a.py-toggle' should not * modify the font size of the text.) * - If a source code page is opened with an anchor, then the * corresponding code block will be highlighted. The code * block's header is highlighted with 'py-highlight-hdr'; and * the code block's body is highlighted with 'py-highlight'. * - The remaining py-* classes are used to perform syntax * highlighting (py-string for string literals, py-name for names, * etc.) */ pre.py-doctest { padding: .5em; margin: 1em; background: #e8f0f8; color: #000000; border: 1px solid #708890; } table pre.py-doctest { background: #dce4ec; color: #000000; } pre.py-src { border: 2px solid #000000; background: #f0f0f0; color: #000000; } .py-line { border-left: 2px solid #000000; margin-left: .2em; padding-left: .4em; } .py-lineno { font-style: italic; font-size: 90%; padding-left: .5em; } a.py-toggle { text-decoration: none; } div.py-highlight-hdr { border-top: 2px solid #000000; border-bottom: 2px solid #000000; background: #d8e8e8; } div.py-highlight { border-bottom: 2px solid #000000; background: #d0e0e0; } .py-prompt { color: #005050; font-weight: bold;} .py-more { color: #005050; font-weight: bold;} .py-string { color: #006030; } .py-comment { color: #003060; } .py-keyword { color: #600000; } .py-output { color: #404040; } .py-name { color: #000050; } .py-name:link { color: #000050 !important; } .py-name:visited { color: #000050 !important; } .py-number { color: #005000; } .py-defname { color: #000060; font-weight: bold; } .py-def-name { color: #000060; font-weight: bold; } .py-base-class { color: #000060; } .py-param { color: #000060; } .py-docstring { color: #006030; } .py-decorator { color: #804020; } /* Use this if you don't want links to names underlined: */ /*a.py-name { text-decoration: none; }*/ /* Graphs & Diagrams * - These CSS styles are used for graphs & diagrams generated using * Graphviz dot. 'img.graph-without-title' is used for bare * diagrams (to remove the border created by making the image * clickable). */ img.graph-without-title { border: none; } img.graph-with-title { border: 1px solid #000000; } span.graph-title { font-weight: bold; } span.graph-caption { } /* General-purpose classes * - 'p.indent-wrapped-lines' defines a paragraph whose first line * is not indented, but whose subsequent lines are. * - The 'nomargin-top' class is used to remove the top margin (e.g. * from lists). The 'nomargin' class is used to remove both the * top and bottom margin (but not the left or right margin -- * for lists, that would cause the bullets to disappear.) */ p.indent-wrapped-lines { padding: 0 0 0 7em; text-indent: -7em; margin: 0; } .nomargin-top { margin-top: 0; } .nomargin { margin-top: 0; margin-bottom: 0; } /* HTML Log */ div.log-block { padding: 0; margin: .5em 0 .5em 0; background: #e8f0f8; color: #000000; border: 1px solid #000000; } div.log-error { padding: .1em .3em .1em .3em; margin: 4px; background: #ffb0b0; color: #000000; border: 1px solid #000000; } div.log-warning { padding: .1em .3em .1em .3em; margin: 4px; background: #ffffb0; color: #000000; border: 1px solid #000000; } div.log-info { padding: .1em .3em .1em .3em; margin: 4px; background: #b0ffb0; color: #000000; border: 1px solid #000000; } h2.log-hdr { background: #70b0ff; color: #000000; margin: 0; padding: 0em 0.5em 0em 0.5em; border-bottom: 1px solid #000000; font-size: 110%; } p.log { font-weight: bold; margin: .5em 0 .5em 0; } tr.opt-changed { color: #000000; font-weight: bold; } tr.opt-default { color: #606060; } pre.log { margin: 0; padding: 0; padding-left: 1em; } petsc4py-3.7.0/docs/apiref/class_hierarchy_for_factorshif.png0000644000175000001440000000350612711405154025212 0ustar dalcinlusers00000000000000PNG  IHDR}$+cMbKGDIDAThkPWOeQ^% 3R"1 >*V>XĤ -A J bkEV!Ec[I k1`G"oݳwvf.NƘ7wÀn 4Z]Z[WWjk?VkPD$& =D * 7gƌbgtt!!A'Àn0 ><=o# O&ۑdJBBT(P%H@$BĤY̙3Z?Go 6?߹bQQԼe%C۷O{z;w2ixSPV$g* VVMG?v~5'==o߿ޙII+wz6VVjڙHhjbbjb}r9=wd$ZJD:F;PPJjON3a;罽0{ #g=rny/ VT56:3un77.)A[I/64LeV΢qHkSSvLfF޺wŋي~P*22,KP*땞K> ݔ*UT}Gwp6ffϞ}WXXZYy˭k B說Bb?qd?׳EvVOw,ͻw'/\H_cBD[IE]ݭd.W6΢qHhJ ʯ\..>23+)AG/NU^q>>ƿvdܸ%%IIll/̙o6n$HMK9Sg>1q#DJ-<9ĉ03K>}&?7mѢS;V47_^o:B joS. FnFrv7oF-/ڹӉH$HxkMg}o\tBaLZZLF>%3pqpq9Z=uur?~T.ԄT2J&IȈ D9,K,j[ecݻCO{9FC;|da1t#V Exbbտe''#A[ۇH}hcommǷwt œ64M$[[p>>J\@ \\r\ =z4ZBgj4MMgW^?qbFwE8AP^tep𮬬E b O&qD@6AGG@=٪WoHO_`zy)U#GVk8H;\E`?33S(42bcWuf0VoJN675eFG/ d>ry R<חu+LqpKLz Ɍp>G |`0Rwd.M(H]~Xt2 #<~gC_D[N*/ dFG8JD 8=N둻vtd]HD 45˘/] OH0$ϼB.ńA:W4̊^dYhpW˖Fwy{? MCJhîwÀn0 a>7ވ_ǫjQWkT}@}76|:Ƙ=W a|7  1OIENDB`petsc4py-3.7.0/docs/apiref/frames.html0000644000175000001440000000111512711405152020416 0ustar dalcinlusers00000000000000 PETSc for Python petsc4py-3.7.0/docs/apiref/class_hierarchy_for_boundaryty.png0000644000175000001440000000324712711405152025262 0ustar dalcinlusers00000000000000PNG  IHDRu$8bKGD\IDAThm4i/3RYL(ZzLAvx+= v>$rMS$[I:hĆ`fәd1t_yzfyTD"(Q6W(U0" UTT҆H$r\q3E88RUB 6/%LO__Sk+\f R\(ifM*bQX*wbi)7mʎԔ+N6]"CmIuعJK-׭[@|fA ''JN.l!찷q*< @NdW[SS}>:66=: KJ]TT͛<)\k*(`P1_3STjŋG( 񼢢ׯ`R##̗CCHyjAAJD񰰊i*H鰻I923YLfՍYL/,|]\\{۷ɑ!(ڮ3WW.-:zibHHR a08<|A'oْjjʘ11x.ET-is++IBOijddcnCXC==sSS:Z(CP2k!MLd:P(UU}^ ¯ ZCÞ~ɪY{mmr%/= "0nJbؘd Q]ZWsؖ"652z1bWD X򽢙BƲe//6?8z5z RG#I̸gm'<lq>':x$'>^R/>1NN\Vv++]]w< ڻ:X,QKe[νg&3ޣ 5rh;0x 551t3hV^2@51yۛ^Q_nlDrrrjJ 9yFxYZ[O ۀ`t=|1~񢵽%$$C9_ۀ}ID2!kn*OIA.Ƭ87N:mᎇEYf-0pZZw$aiQQ{<= =.!! (.GQ/Gw:OL&8@ u 㡡X +__ k"N~hJ"fώdeuq8EII2CQ ʼ%0?9sKbmnkƍWX 'Om6 64,DuQyzÒ~?q*eEbygJIO_P(Pr\rF|>Jz>JE|W(oEbQX7DIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.PC-class.html0000644000175000001440000020146312711405155023250 0ustar dalcinlusers00000000000000 petsc4py.PETSc.PC
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PETSc for Python
Package petsc4py :: Module PETSc :: Class PC
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[frames] | no frames]

Class PC

Nested Classes [hide private]
  ASMType
  CompositeType
  GAMGType
  GASMType
  MGType
  SchurFactType
  SchurPreType
  Side
  Type
Instance Methods [hide private]
 
__call__(...) <==> x(...)
a new object with type S, a subtype of T
__new__(S, ...)
 
addCompositePC(self, pc_type)
 
apply(self, Vec x, Vec y)
 
applySymmetricLeft(self, Vec x, Vec y)
 
applySymmetricRight(self, Vec x, Vec y)
 
applyTranspose(self, Vec x, Vec y)
 
create(self, comm=None)
 
createPython(self, context=None, comm=None)
 
destroy(self)
 
getASMSubKSP(self)
 
getCompositePC(self, n)
 
getDM(self)
 
getFactorMatrix(self)
 
getFactorSolverPackage(self)
 
getFieldSplitSubKSP(self)
 
getHYPREType(self)
 
getKSP(self)
 
getMGCoarseSolve(self)
 
getMGInterpolation(self, level)
 
getMGLevels(self)
 
getMGRScale(self, level)
 
getMGRestriction(self, level)
 
getMGSmoother(self, level)
 
getMGSmootherDown(self, level)
 
getMGSmootherUp(self, level)
 
getMGType(self)
 
getOperators(self)
 
getOptionsPrefix(self)
 
getPythonContext(self)
 
getType(self)
 
reset(self)
 
setASMLocalSubdomains(self, nsd)
 
setASMOverlap(self, overlap)
 
setASMTotalSubdomains(self, nsd)
 
setASMType(self, asmtype)
 
setCompositeType(self, ctype)
 
setCoordinates(self, coordinates)
 
setDM(self, DM dm)
 
setFactorLevels(self, levels)
 
setFactorOrdering(self, ord_type=None, nzdiag=None, reuse=None)
 
setFactorPivot(self, zeropivot=None, inblocks=None)
 
setFactorShift(self, shift_type=None, amount=None)
 
setFactorSolverPackage(self, solver)
 
setFieldSplitFields(self, bsize, *fields)
 
setFieldSplitIS(self, *fields)
 
setFieldSplitSchurFactType(self, ctype)
 
setFieldSplitSchurPreType(self, ptype, Mat pre=None)
 
setFieldSplitType(self, ctype)
 
setFromOptions(self)
 
setGAMGLevels(self, levels)
 
setGAMGSmooths(self, smooths)
 
setGAMGType(self, gamgtype)
 
setGASMOverlap(self, overlap)
 
setGASMType(self, gasmtype)
 
setHYPREDiscreteCurl(self, Mat mat)
 
setHYPREDiscreteGradient(self, Mat mat)
 
setHYPRESetAlphaPoissonMatrix(self, Mat mat)
 
setHYPRESetBetaPoissonMatrix(self, Mat mat=None)
 
setHYPRESetEdgeConstantVectors(self, Vec ozz, Vec zoz, Vec zzo=None)
 
setHYPREType(self, hypretype)
 
setMGCyclesOnLevel(self, level, ncycle)
 
setMGInterpolation(self, level, Mat mat)
 
setMGR(self, level, Vec r)
 
setMGRScale(self, level, Vec rscale)
 
setMGRestriction(self, level, Mat mat)
 
setMGRhs(self, level, Vec rhs)
 
setMGType(self, mgtype)
 
setMGX(self, level, Vec x)
 
setOperators(self, Mat A=None, Mat P=None)
 
setOptionsPrefix(self, prefix)
 
setPythonContext(self, context)
 
setPythonType(self, py_type)
 
setReusePreconditioner(self, flag)
 
setType(self, pc_type)
 
setUp(self)
 
setUpOnBlocks(self)
 
setUseAmat(self, flag)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getOptionsPrefix(self)

 
Overrides: Object.getOptionsPrefix

getType(self)

 
Overrides: Object.getType

setFromOptions(self)

 
Overrides: Object.setFromOptions

setOptionsPrefix(self, prefix)

 
Overrides: Object.setOptionsPrefix

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
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petsc4py-3.7.0/docs/apiref/class_hierarchy_for_type_3.png0000644000175000001440000000156412711405153024266 0ustar dalcinlusers00000000000000PNG  IHDR=$٥bKGD)IDATXc?L2 #dFFƁvv SQ4ڵp KAVBBWw܆^Z&80n,?XcGdE+ թ$wt|ggϬ la*; / ݜ _g``TKy o߸߸qcF9:uv?NNb0wlܿ߿ P'i+Wn~-+Wj5˗`ggdh//4lkʤ$l^..pT}5΂R"?pMP?ɉY090090Y{^cFmZxޓ'6lH x} 7wzH@T+O썍:&(&$4ZV ڎu7}Pu7|yҥ0'/_b ߿_x\E`ffFp87] :yaIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.AO-class.html0000644000175000001440000004766412711405152023255 0ustar dalcinlusers00000000000000 petsc4py.PETSc.AO
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PETSc for Python
Package petsc4py :: Module PETSc :: Class AO
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Class AO

Nested Classes [hide private]
  Type
Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
app2petsc(self, indices)
 
createBasic(self, app, petsc=None, comm=None)
 
createMapping(self, app, petsc=None, comm=None)
 
createMemoryScalable(self, app, petsc=None, comm=None)
 
destroy(self)
 
getType(self)
 
petsc2app(self, indices)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setFromOptions, setName, setOptionsPrefix, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getType(self)

 
Overrides: Object.getType

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:46 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_type_4.png0000644000175000001440000000156412711405154024270 0ustar dalcinlusers00000000000000PNG  IHDR=$٥bKGD)IDATXc?L2 #dFFƁvv SQ4ڵp KAVBBWw܆^Z&80n,?XcGdE+ թ$wt|ggϬ la*; / ݜ _g``TKy o߸߸qcF9:uv?NNb0wlܿ߿ P'i+Wn~-+Wj5˗`ggdh//4lkʤ$l^..pT}5΂R"?pMP?ɉY090090Y{^cFmZxޓ'6lH x} 7wzH@T+O썍:&(&$4ZV ڎu7}Pu7|yҥ0'/_b ߿_x\E`ffFp87] :yaIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_type_9.png0000644000175000001440000000156412711405156024277 0ustar dalcinlusers00000000000000PNG  IHDR=$٥bKGD)IDATXc?L2 #dFFƁvv SQ4ڵp KAVBBWw܆^Z&80n,?XcGdE+ թ$wt|ggϬ la*; / ݜ _g``TKy o߸߸qcF9:uv?NNb0wlܿ߿ P'i+Wn~-+Wj5˗`ggdh//4lkʤ$l^..pT}5΂R"?pMP?ɉY090090Y{^cFmZxޓ'6lH x} 7wzH@T+O썍:&(&$4ZV ڎu7}Pu7|yҥ0'/_b ߿_x\E`ffFp87] :yaIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.DMDA.ElementType-class.html0000644000175000001440000002043612711405153025702 0ustar dalcinlusers00000000000000 petsc4py.PETSc.DMDA.ElementType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class DMDA :: Class ElementType
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[frames] | no frames]

Class ElementType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  P1 = 0
  Q1 = 1
  __qualname__ = 'DMDAElementType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
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petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Random.Type-class.html0000644000175000001440000002234512711405156025107 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Random.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Random :: Class Type
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[frames] | no frames]

Class Type

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  RAND = 'rand'
  RAND48 = 'rand48'
  RANDER48 = 'rander48'
  SPRNG = 'sprng'
  __qualname__ = 'RandomType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
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petsc4py-3.7.0/docs/apiref/petsc4py.PETSc._Mat_Stencil-class.html0000644000175000001440000002356312711405160025306 0ustar dalcinlusers00000000000000 petsc4py.PETSc._Mat_Stencil
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PETSc for Python
Package petsc4py :: Module PETSc :: Class _Mat_Stencil
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Class _Mat_Stencil

Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  c
  field
  i
  index
  j
  k

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:52 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.PC.CompositeType-class.html0000644000175000001440000002216712711405155026055 0ustar dalcinlusers00000000000000 petsc4py.PETSc.PC.CompositeType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class PC :: Class CompositeType
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Class CompositeType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  ADDITIVE = 0
  MULTIPLICATIVE = 1
  SCHUR = 4
  SPECIAL = 3
  SYMMETRIC_MULTIPLICATIVE = 2
  __qualname__ = 'PCCompositeType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:49 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_snes.png0000644000175000001440000000400212711405156024024 0ustar dalcinlusers00000000000000PNG  IHDRG[!bKGDIDATxqLYǿ(!#B *Qb= ʹMw愲 s#1Q]H\vw!i"VȻ?YiI;>K:y7{3Ӿ)G!`C3L&Bk4n߾/_"T*{nqq`0?⪁Bta577 'ڄcv9 L&drv;4 n݊իWcΝ&;>d2<@2NG! <BILL$B.RHBBy?44$l/X(ǫyYf J%L&'*7LHMM 322u9EDD`ffi$$%%zd9|0jkkEW%V y< f36n(jO&yfL&aX-ȩ'Ow^tvvyܺu iiiHNNFqqP }}}‘#GD梲VƥKPXXj bppǏjuwjjJCz" )RVVFRRRHhh(INN&gϞ%p K )++#3339ٳgѣ$22DEEb4)//'$""F!dvvڵ/*nڜ#_yS?YV& bŊGLܿjذaCqB_HNNxpKϜ CɡP`r(V!!h_ik,(5#''? :ί Yr%rss< WeByyy~lΡP`r(09 L&CɡP`r(09 L&CɡP`r(09 L&CɡG~޳<__㐙 B!.t]BOƮ?SBBۭ&yom]Çn &O"}˖% h9WXNe jɃZ.|EîV LL9(olD\NV!q33BNBF#Z17^T*i1d}<0|6(0NhӧB8Mm_~hΜ?ww lOJ<2'/T=yd$2(-?_LO yvv:G!16%uudrZpohj_[Ǻ:=gS(-?_LήmOrovlz}oDucbpIj{|%oI_קs{%%QU\&?tQ|ŷLm B~QYZ4qAAAV[Ll0,y ɥ<<4E|h,/GR\&&P؈%;nz|~~Y_/*j(_)yb>ʙ38{2.^obmTfewM>>p7Ftk"- x^|}`r(09 L&Cz+e D1Zj%j9q ܗ>>0 &B.W~IENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_option.png0000644000175000001440000000216612711405154024373 0ustar dalcinlusers00000000000000PNG  IHDRG$'bKGD+IDAThHw_tL?j+f3HByQaƝQՅa AF(:3GXQ6\ΕwMRlz?g<~Q ya3ͨȠ#%%%~FGEccD) GOv&qLê/^kXe˰lӗ,A2OePőAGz)m]j*+L&8}ᑑgtBq)IIA)IIzdmcu5?=ʅW9t ?nm qK}=㧶6e;m9^8}4FL_d>ߵ:C?|W{j\ɉT9GF#:nG>:1wvwvҥ h>38.N*[?QQiB%9z='NJ^/Zr32;==oI ,` +r-ق0=@fH߾k׸CK,(ŋٖ#}kr:q6VWSnaZ-Ƭ,v[KGW55J."p(rώnWbcْM֭h4|;zْMyq1Z/祌 petsc4py.PETSc.TS.ExactFinalTime
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PETSc for Python
Package petsc4py :: Module PETSc :: Class TS :: Class ExactFinalTime
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Class ExactFinalTime

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  INTERPOLATE = 2
  MATCHSTEP = 3
  STEPOVER = 1
  UNSPECIFIED = 0
  __qualname__ = 'TSExactFinalTime'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:51 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Viewer.Mode-class.html0000644000175000001440000002474412711405160025073 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Viewer.Mode
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Viewer :: Class Mode
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[frames] | no frames]

Class Mode

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  A = 2
  APPEND = 2
  APPEND_UPDATE = 4
  AU = 4
  R = 0
  READ = 0
  U = 3
  UA = 4
  UPDATE = 3
  W = 1
  WRITE = 1
  __qualname__ = 'FileMode'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:52 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.SNES.NormSchedule-class.html0000644000175000001440000002577412711405156026117 0ustar dalcinlusers00000000000000 petsc4py.PETSc.SNES.NormSchedule
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PETSc for Python
Package petsc4py :: Module PETSc :: Class SNES :: Class NormSchedule
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Class NormSchedule

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  ALWAYS = 1
  DEFAULT = -1
  FINAL_ONLY = 3
  INITIAL_FINAL_ONLY = 4
  INITIAL_ONLY = 2
  NONE = 0
  NORM_ALWAYS = 1
  NORM_DEFAULT = -1
  NORM_FINAL_ONLY = 3
  NORM_INITIAL_FINAL_ONLY = 4
  NORM_INITIAL_ONLY = 2
  NORM_NONE = 0
  __qualname__ = 'SNESNormSchedule'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/index.html0000644000175000001440000000111512711405160020247 0ustar dalcinlusers00000000000000 PETSc for Python petsc4py-3.7.0/docs/apiref/class_hierarchy_for_logstage.png0000644000175000001440000000250712711405154024667 0ustar dalcinlusers00000000000000PNG  IHDRX$jbKGDIDAThkLSgǟ5VFT(de>TA<ܣȺiױ1pF.!$- eBLƀP]-DnQ YiKpԦdM-,;/7<qHl;i҈FA;#k @ 01,mmm׷1?kbccfn0X : Y90n;.Y//0cRi=M̘}%:O$z'!a㗜\RS՚f)aE|}lt˿I$-b1L)HC F|Y|W׈ﻺ`ŌxT.*EFhH8^&"AA{wuS成ix@&mR)˥p8^11nWu|3*|xU3#bn~~-FQXQ^WW_Z rb歊r#G"( <Jv,/1ծAP(HIi4)(nhx2;;J<]\\\]]o̊XnK$W0l/ϯ,;Jcذ0K SML>f57wmk+31޽ ::8 55Uxh OOX\ZJ𛖖k1t3g$f`:ח`(?Gc2 sLPi4'PbqX%55Xo,`o?6=YVV'33קObb q%XfExLIc/9SSxFa8D$6,Lght ?uJvvPHM eq|M3J0ӈ s/_.{;;nllŋOfg8ڇ _rXeeÇ? "D|Ű)ǡztvPܨT^-psJ^ѣTgii?E7n OGQtmR)Nߟ޽'. r16o@5<6 e?MMQXW//}c>?~|G zH#F!Cy=4^ f4BinfIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_equationty.png0000644000175000001440000000313712711405157025267 0ustar dalcinlusers00000000000000PNG  IHDRq$1_BbKGDIDATh{LSWm)[C[␢2&6 "0AaBd TG8Tl}uGi" "HΈEb[,B>Ǎ~r8w9t:` S04EL1@g@TT}~8::rhcDΞ=0Cf1b̐vt76F[\,_\3g**ꓒ`GLS4E!1-- }ŊQ,*/_:~9w.z)@]^W3gJTmXXի@&R6lUUO._H9"&j:cT P:ݳ/4L?ЫT}8hΧZ6) $5JڞJOG/deK׮!53?LOaaeNΕ7v=j8&j &^ ,,liK펍aJ-BCP''S :==&&E$kSHDXz5\[߱XD"-(,+[?؟@sa0v!nsET Ns嵵&c|@,vьR hT@mN$6mLOc͛:=hsTցFvv"3flG ==tvt|qCCfF>jop2·DMd՝~#eSK>Kј7r(U`?W$Χ d W 0'*կǎ@Bd!SYȲe2YSK0_Fj&~~xE"yu˗j6'=ysqL짮F]CֈFe߾ Q]9y`b+WL"HL ۶m%/2rwLŲpz =gx7D޼FKWن0__NtB\ヸݵiS@ p48o|ʹ {G2YAFrVlg**$((1NkU*=uiqkziQhh_L5c"4a/\h5m۷Q?i>3U<[ ƐH;:kZ\.+ @x{5 }0M}ś$BADIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.SNES.ConvergedReason-class.html0000644000175000001440000002737412711405156026611 0ustar dalcinlusers00000000000000 petsc4py.PETSc.SNES.ConvergedReason
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PETSc for Python
Package petsc4py :: Module PETSc :: Class SNES :: Class ConvergedReason
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Class ConvergedReason

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  CONVERGED_FNORM_ABS = 2
  CONVERGED_FNORM_RELATIVE = 3
  CONVERGED_ITERATING = 0
  CONVERGED_ITS = 5
  CONVERGED_SNORM_RELATIVE = 4
  CONVERGED_TR_DELTA = 7
  DIVERGED_FNORM_NAN = -4
  DIVERGED_FUNCTION_COUNT = -2
  DIVERGED_FUNCTION_DOMAIN = -1
  DIVERGED_INNER = -7
  DIVERGED_LINE_SEARCH = -6
  DIVERGED_LOCAL_MIN = -8
  DIVERGED_MAX_IT = -5
  ITERATING = 0
  __qualname__ = 'SNESConvergedReason'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Viewer-class.html0000644000175000001440000010313212711405157024203 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Viewer
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Viewer
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Class Viewer

Nested Classes [hide private]
  Format
  Mode
  Size
  Type
Instance Methods [hide private]
 
ASCII(type cls, name, comm=None)
 
BINARY(type cls, comm=None)
 
DRAW(type cls, comm=None)
 
STDERR(type cls, comm=None)
 
STDOUT(type cls, comm=None)
 
__call__(...) <==> x(...)
a new object with type S, a subtype of T
__new__(S, ...)
 
clearDraw(self)
 
create(self, comm=None)
 
createASCII(self, name, mode=None, comm=None)
 
createBinary(self, name, mode=None, comm=None)
 
createDraw(self, display=None, title=None, position=None, size=None, comm=None)
 
createHDF5(self, name, mode=None, comm=None)
 
createMPIIO(self, name, mode=None, comm=None)
 
createNetCDF(self, name, mode=None, comm=None)
 
createVTK(self, name, mode=None, comm=None)
 
destroy(self)
 
flush(self)
 
getFileMode(self)
 
getFileName(self)
 
getFormat(self)
 
getType(self)
 
popFormat(self)
 
pushFormat(self, format)
 
setDrawInfo(self, display=None, title=None, position=None, size=None)
 
setFileMode(self, mode)
 
setFileName(self, name)
 
setType(self, vwr_type)
 
view(self, obj=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setFromOptions, setName, setOptionsPrefix, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getType(self)

 
Overrides: Object.getType

view(self, obj=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:51 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Random-class.html0000644000175000001440000005613012711405156024166 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Random
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Random
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Class Random

Nested Classes [hide private]
  Type
Instance Methods [hide private]
 
__call__(...) <==> x(...)
a new object with type S, a subtype of T
__new__(S, ...)
 
create(self, comm=None)
 
destroy(self)
 
getInterval(self)
 
getSeed(self)
 
getType(self)
 
getValue(self)
 
getValueReal(self)
 
setFromOptions(self)
 
setInterval(self, interval)
 
setSeed(self, seed=None)
 
setType(self, rnd_type)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setOptionsPrefix, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  interval
  seed

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getType(self)

 
Overrides: Object.getType

setFromOptions(self)

 
Overrides: Object.setFromOptions

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Viewer.Type-class.html0000644000175000001440000003031112711405160025113 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Viewer.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Viewer :: Class Type
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Class Type

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  ASCII = 'ascii'
  BINARY = 'binary'
  DRAW = 'draw'
  HDF5 = 'hdf5'
  MATHEMATICA = 'mathematica'
  MATLAB = 'matlab'
  NETCDF = 'netcdf'
  SAWS = 'saws'
  SOCKET = 'socket'
  STRING = 'string'
  VTK = 'vtk'
  VU = 'vu'
  __qualname__ = 'ViewerType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:52 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_tao.png0000644000175000001440000000402012711405157023640 0ustar dalcinlusers00000000000000PNG  IHDRG[!bKGDIDATxoLSWǿEʆ@ +uSC4@f%\hbh2k-o-btRӪF>|D(By^(wVznܤ{nsϽVD!`JD#xar(09"XXXG|ȯh4`0l6ܹs>uZ-pf@ҥK`۷188 ., pIY?t: 2>>w{oo/ń8z=IKK#pG!$++ݼy( "իWJ{+s JaZQPPj"77_߶mZ&attԧ06oU9^i%$cNYY}J. MMM())8_"55xb?NZi%!h066|Fpk׮ATB.߷v}}}8u*++}W\\zDss3qil6l6Fo ;**uؘy[ш-R)t&>cL\#شa>6lv;47ł[X!\DNԺuZ053pe182̗f5B_2SSq /9%%h{T 1d¾\(JKda0@S];bD h|axJJLLNPd~+d2<|iMοm6@ɋ믰{"aoe4½}^: 9HT,u`JO}r}Ws<L&|YWɟ旚rL&>a_}ǫkfM|_0)ʊ/ =~i1)?Ɵ~1@yCA ie4"_D҆ ^eg#=%: ;;miZţ~C[o5O^\NFJ ȋٿ\nhH$bEM ,`V L&CɡP>G Ǫh{9 x<~WZdffBwo"X kLH&ļXE:/,IENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_mode.png0000644000175000001440000000165112711405160024002 0ustar dalcinlusers00000000000000PNG  IHDRA$YbKGD^IDATXc?L*Q?  $''32255/^&!-k׮;Y߿ 6˗/]b``/\Sʮ.z㥥hC&~?05R< <~L w?f40 jxx[>:{JN" ջwù71Hd!uΝfϟjkEeJ~߿ xO^ Qϟ~q''1G_$_;u.իSKn:ucOZg΂[6UOQٿdO,[w֬}NMF??033;;ڵaˡCرcbYjSV֒[g^UX$)"ecӞQ<);%1Xi"A[JCCkNΚݻC\]/߾ "++Fuu=55gH _?~O@JHLL>p>y"-& %uM+w@"7o >|bb)9LGGLH.y+wLZ߿o8z+'Mz[<\IKOK aVʉDRYeQo詪.koe``h2 gbd vq,( -6ۭa V `~` ?`_1v0H/1Q߿/^<~^"033#8``~d|w2IENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_is.png0000644000175000001440000000342212711405153023471 0ustar dalcinlusers00000000000000PNG  IHDRG[!bKGDIDATxLgǿ8!U4v68 FB0qR QGY3H1Eʪ $"q RMZx3l'޽O{߻kk""pf)J ". :`||ׯ_GBp8DGGj "uiiQjs(|a0rp9 `Xyf,]۷oǩSB9 ׫T:gϞa۶mDmm-P^^LtTWWV9AѼv|jt:h" T\t ;v`(--n(**Bee%zzzӃ#Gͨ;::D^0>dttf3RLL  1"{Lr Yt:f cӧOСC@TRRB@ǩ)>> Q0,Wެ1G19ryUB’V. xb3r޽ Ʉb\Rtf NcVT?r".Àa0;[EG(b}_cap8 up{{;l6v/0dar,Y=P4{.{sp9 \.Àa0rp9 \.Àa0rp9 \.Àa0r(2[@󛚚d999t?mTEmIEQԔ0r}E(:a"d)r^ؾnb&!g+\.jrއѱ19x##wFU]'&JQ| XpStpQlMI6!9qxj9E7ccݎ'##RYNz:|--1rNFWo/2Ni)|Y]H"FN֖-Ԅ_.\@֭OXU)"W^vMII MM(.1M"BrcՂ 1Ex=;v ͷn#zΜAa^jyEu΅>C7ߠ9>'&b_n.>(rPM|"xEQQ*-E2Bnp9 \.ÀauTGDTNɄJx<% (,,T&k9ma @ބ._~4IENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Comm-class.html0000644000175000001440000004603412711405152023637 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Comm
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Comm
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Class Comm

Instance Methods [hide private]
 
Barrier(self)
 
Clone(self)
 
Dup(self)
 
Free(self)
 
Get_rank(self)
 
Get_size(self)
 
__eq__(y)
x==y
 
__ge__(y)
x>=y
 
__gt__(y)
x>y
 
__le__(y)
x<=y
 
__lt__(y)
x<y
 
__ne__(y)
x!=y
a new object with type S, a subtype of T
__new__(S, ...)
 
__nonzero__()
x != 0
 
barrier(self)
 
destroy(self)
 
duplicate(self)
 
getRank(self)
 
getSize(self)
 
tompi4py(self)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  fortran
  rank
  size

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:46 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Mat.Structure-class.html0000644000175000001440000002425512711405155025470 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Mat.Structure
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Mat :: Class Structure
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Class Structure

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  DIFFERENT = 0
  DIFFERENT_NONZERO_PATTERN = 0
  DIFFERENT_NZ = 0
  SAME = 2
  SAME_NONZERO_PATTERN = 2
  SAME_NZ = 2
  SUBSET = 1
  SUBSET_NONZERO_PATTERN = 1
  SUBSET_NZ = 1
  __qualname__ = 'MatStructure'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:49 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.SF.Type-class.html0000644000175000001440000002071112711405156024172 0ustar dalcinlusers00000000000000 petsc4py.PETSc.SF.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class SF :: Class Type
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Class Type

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  BASIC = 'basic'
  WINDOW = 'window'
  __qualname__ = 'SFType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_section.png0000644000175000001440000000456412711405156024535 0ustar dalcinlusers00000000000000PNG  IHDRM[66bKGD )IDATxPT?ˏ7=>vIL"1@B䠍̚IGxj_/up5԰P#RcѨC*&eR_,}ʾPx8ev?ʛzv5g=sg9W#nC*MU2TWW|;bq ݙ9s&sύ3 ;xxxZtbl +uM@&*MU"^ĉfҤIJk6h47_`6#4ti,Dhh'O*W˗f6חF#Fbbbshh(MMMihh`ԨQ|||XXaaaΨ]ަ-X~dgg3g%d2)j1LJ߰ihhPFl.-##0 L&BPNz{aGuH^0t#F0-&76l}P=Bp᧟u/^`i>7KK{UpZL AYlc?(<6+WؒϘdt3fhf3/϶vȺ\IDEQDŽ=46vFU'I+ɓܛ@ewğWTęg9{TCW_(*O)߹{Xؾw/5ã]EcK _ VUqwY ;v5_#8Eh9pC'J>b׋/@dHk`K<֕+ !bx 23yxDǴl7ih"CB\r%T|SOŋΨ=;/]371Hb##slg}^s>^^t[lp+===ZIDcK<=;3Mt}MVѐخÿ́ӡCa4Z]MMa!: )N)@͍g*iil^_+685lf"uzʫ9ȑoa]n.󒓕|H ,MMדbKJX8kvllfUVk$} 5)9s,uf3wb):)W^a۞=lܹH??RxSm[99D0'>5kpws%/%f>9k060ьȑ~ݕ&͟<=sr2>* HQW)MIL$'gpU>L^@ii)sU}O Ti$PIJ@&*Mq_7%r&L _}ń+HJ80Ai 5C}^kIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_logclass.png0000644000175000001440000000237312711405154024672 0ustar dalcinlusers00000000000000PNG  IHDRX$jbKGDIDAThc?(```h 0P00 $''322Έ\X233oGO_8% AVBBWwF/p/^000 Sʮ. `ррrǔJOOKKӨA<~h`@dHo?~4 XujȊǎ%KAkP?mzWKI۷= [Y1p@Z{{7?Z|N[${GG#OO؈fC ù%]\:̓n>xP/4L{-xITK9/޾=tߣ*+yZfϞ`u̖?xFCAY/_cL|̙@.҉eeێIrvf``$ رJ22 MYYe]bnޔUY iѰ]\JVB]V\/,;{';/_0u˷o,#>y:p5Z ||C~UӨo?~EXYo=|葕e`& 9sN\,f|9&&&dx:!.,tS'bbRRWޅ󼟽}E%[󇋃.ϰs+VL ouwC}}U /߿ uvʝ;5SD{yeM?;ua Hh=xLlu/ݺ8cƤeZssׯ߿XYY?}:_23[ݻ_rqp`$GdVqq.L2bceLJbceoV[ۛ- RDϮXQZR7MEM'z"([\]UY鑕r߾U'g+Ȭ`gg``*H* ssJsˡCjj={Zf>r%&SVŀ aҭ[1UU_ljKjNM u,PX{%i餀YG!a@03 *n8C,8rQDFG@ha 6'xSIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_type_7.png0000644000175000001440000000156412711405156024275 0ustar dalcinlusers00000000000000PNG  IHDR=$٥bKGD)IDATXc?L2 #dFFƁvv SQ4ڵp KAVBBWw܆^Z&80n,?XcGdE+ թ$wt|ggϬ la*; / ݜ _g``TKy o߸߸qcF9:uv?NNb0wlܿ߿ P'i+Wn~-+Wj5˗`ggdh//4lkʤ$l^..pT}5΂R"?pMP?ɉY090090Y{^cFmZxޓ'6lH x} 7wzH@T+O썍:&(&$4ZV ڎu7}Pu7|yҥ0'/_b ߿_x\E`ffFp87] :yaIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_normtype_2.png0000644000175000001440000000250312711405155025155 0ustar dalcinlusers00000000000000PNG  IHDR]$d>bKGDIDAThc?(LA F; ?HNNfddh PSS{<(P…iD'kƒY߿ O^<~߿,,Vvu] V}MpDg<`4\p FRĝǏ ;v0` 7oR|"rf;wFxxP5 a``U\ , @u2%=$$DBDdgdgg``;'Yh((57cv?|P[+bo/VOH.{򤜇Ǒ mؠ(1o-[kNcc^ggrC7.s7n@Lxc^g_~S/$XR=Hf033/hns͛Ѥr۟zujS=lY:U7m$>R|\?+vXV$#ڔdVTWAA;CAt4/7w/Cql,/7w?OpYgmhzYe۶r=EErr溺o8BVBBWU`ѣz:'"PC#^}?eWEVɫW"\+ `fb rrZw<RZg..5=ӧzr75醄Z"".,tS-%%OHA usRV14~HWUÇR "Qe``7oHnU)*]eea ww;wjLAX џfΌAW&Of``rv4nʚr%vQbnN5rpLJ `fb rvK3xKZWv5ĺl^..pT}5΂RbDh!%Y۠OWOӥǏU}}_@w+-e``XjUhh(Dp~yɓy6!.'\1J p01 qs:J{cw ͨuC& v0.h`X.acKLApabb/#033#86ˈ96 F]\`4\p@ IENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.PC.SchurFactType-class.html0000644000175000001440000002150212711405155025765 0ustar dalcinlusers00000000000000 petsc4py.PETSc.PC.SchurFactType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class PC :: Class SchurFactType
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Class SchurFactType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  DIAG = 0
  FULL = 3
  LOWER = 1
  UPPER = 2
  __qualname__ = 'PCFieldSplitSchurFactType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:49 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_options.png0000644000175000001440000000223212711405155024551 0ustar dalcinlusers00000000000000PNG  IHDRM$C ubKGDOIDAThc?L:Q3 $''322^x?U]5d100JHXۨ|y%Y0Yꢟ V}MpX%T<`ԟ ϯ߿뇅ZYFE͙)w?f40 RJ9IT+W:._^t6aU{{[<1| AӬY{gffbb``Pw aCJPϧrs֭uH nN҄%[B:;e ̀n?|P[+bo/VOF۶i u-XQAP33%o[ß>~捁: i+Wn}|ΞaNvvG^^  7o_yXK V04z՜oOYFUe```e||9q}rsh^^M3g"_??½qC103ӽO!ܻOHA݄?ouwC}J59KOsjꎣGo?z~>me@;zjoooߐ aea ww;wjLj#[fu^{oVVV.RLN}vK=y(-Y F{y}=ӳ2)PcL2bceLJj;ɓەddVvvr?  ss#rcU_.*`a V o|!!5*QSC]3F^K;KaeC petsc4py.PETSc.DMDA
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PETSc for Python
Package petsc4py :: Module PETSc :: Class DMDA
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Class DMDA

Nested Classes [hide private]
  ElementType
  InterpolationType
  StencilType

Inherited from DM: BoundaryType, Type

Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
create(self, dim=None, dof=None, sizes=None, proc_sizes=None, boundary_type=None, stencil_type=None, stencil_width=None, bool setup=True, ownership_ranges=None, comm=None)
 
createNaturalVec(self)
 
createNaturalVector(self)
 
duplicate(self, dof=None, boundary_type=None, stencil_type=None, stencil_width=None)
 
getAO(self)
 
getBoundaryType(self)
 
getBoundingBox(self)
 
getCoordinateName(self, index)
 
getCorners(self)
 
getDim(self)
 
getDof(self)
 
getElementType(self)
 
getElements(self, elem_type=None)
 
getFieldName(self, field)
 
getGhostCorners(self)
 
getGhostRanges(self)
 
getInterpolationType(self)
 
getLocalBoundingBox(self)
 
getOwnershipRanges(self)
 
getProcSizes(self)
 
getRanges(self)
 
getRefinementFactor(self)
 
getScatter(self)
 
getSizes(self)
 
getStencil(self)
 
getStencilType(self)
 
getStencilWidth(self)
 
getVecArray(self, Vec vec)
 
globalToNatural(self, Vec vg, Vec vn, addv=None)
 
naturalToGlobal(self, Vec vn, Vec vg, addv=None)
 
setBoundaryType(self, boundary_type)
 
setCoordinateName(self, index, name)
 
setDim(self, dim)
 
setDof(self, dof)
 
setElementType(self, elem_type)
 
setFieldName(self, field, name)
 
setInterpolationType(self, interp_type)
 
setProcSizes(self, proc_sizes)
 
setRefinementFactor(self, refine_x=2, refine_y=2, refine_z=2)
 
setSizes(self, sizes)
 
setStencil(self, stencil_type, stencil_width)
 
setStencilType(self, stencil_type)
 
setStencilWidth(self, stencil_width)
 
setUniformCoordinates(self, xmin=0, xmax=1, ymin=0, ymax=1, zmin=0, zmax=1)

Inherited from DM: clearLabelStratum, clearLabelValue, clone, coarsen, coarsenHierarchy, convert, createAggregates, createDefaultSF, createGlobalVec, createGlobalVector, createInjection, createInterpolation, createLabel, createLocalVec, createLocalVector, createMat, createMatrix, destroy, getAppCtx, getBlockSize, getCoordinateDM, getCoordinateSection, getCoordinates, getCoordinatesLocal, getDefaultGlobalSection, getDefaultSF, getDefaultSection, getDimension, getLGMap, getLabelIdIS, getLabelName, getLabelOutput, getLabelSize, getLabelValue, getMatrix, getNumLabels, getPointSF, getStratumIS, getStratumSize, getType, globalToLocal, hasLabel, localToGlobal, localToLocal, refine, refineHierarchy, removeLabel, setAppCtx, setCoordinates, setCoordinatesLocal, setDefaultGlobalSection, setDefaultSection, setDimension, setFromOptions, setLabelOutput, setLabelValue, setMatType, setOptionsPrefix, setPointSF, setType, setUp, setVecType, view

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  boundary_type
  corners
  dim
  dof
  ghost_corners
  ghost_ranges
  proc_sizes
  ranges
  sizes
  stencil
  stencil_type
  stencil_width

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

create(self, dim=None, dof=None, sizes=None, proc_sizes=None, boundary_type=None, stencil_type=None, stencil_width=None, bool setup=True, ownership_ranges=None, comm=None)

 
Overrides: DM.create

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:47 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Mat.FactorShiftType-class.html0000644000175000001440000002254312711405154026543 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Mat.FactorShiftType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Mat :: Class FactorShiftType
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Class FactorShiftType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  INBLOCKS = 3
  NONE = 0
  NONZERO = 1
  NZ = 1
  PD = 2
  POSITIVE_DEFINITE = 2
  __qualname__ = 'MatFactorShiftType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_scattermod.png0000644000175000001440000000334412711405156025231 0ustar dalcinlusers00000000000000PNG  IHDRk$ĵbKGDIDATh{PT]\:ZM@иFf,\v!^,+)J b*dV:!AFfRG 1FLN2ָZ/c uA Μg|~9#2L& d+8Yv`=aƍM"$mRTYY9b6LWcFa4rs#wtZw3Ƭ~p!ss8UD$0,;B0ˎY=}}l;2Vdkq1ۢ{!ˑ\ɽV"Z[_]k}5&fiv>K>?Pm-U^ik%8xpfحosV(YE"f=-^LAz:O_۷m? V(Y?J)j-.s`phQ*e _wwɓT8 p g``pT˙l tY(|v<Qaah(wuw7-\ gs~>3d4^i)^|遁,Y/~[`՜  #<.;;ee|'ٵڒz-)U6LJ*v:\u3eet?0 )+vU^={?;>RR?4Krz s)ç j2sJTiv9{7ٷrvLüKΝc 61+Ϗ eEVU /P~(%lKHW&cܹ&g#MZ-鸻 _ĉ! x/77|e2r>}ڜMNFP0 Vc`xV/q1| KZ?W&#;>#GkE))fr]\ B4a=0 D5#*<__}}b4FDD6goo|pHhΦh*a3M38wx71qY{&CF#Oyzcshv g ͛kzfL&fdpD(c,vt/ˠ4Rׯ(|]fΤ Sc#Fn:ř?4%S9s_*8\io7gM/[IkڬiNNb4:ŕ6ꛚ؜u+Vfa!t:.t$3 (`gkq10|/b̻ۿ !}g'QdzjvYm 0-)SP)$U{;t:Rd$qQQj4:q7>}0z&e`oΞ=dE^3*82bb5P*K۴23NJFL k""P^SCt󤇇E^OB,*4d:_h"5k/\~v- J2bbH$`s^7nP&\&`ݺ̈D V'hZH{B0ˎ̲#,;B0ˎ̲#}) D>J-b1F֮.Z&C>lذ!09HRT*՘&-r=!eGf#&IENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for__dmcomposi.png0000644000175000001440000000406112711405160025205 0ustar dalcinlusers00000000000000PNG  IHDR$tr-bKGDIDATx{PSW "@4P-->j]D»,C@hiYAA .#A^NKjZ6GN!!drvV//̡Yabdov+, 1y`ajJ57BquvcOph+sݺ ^jlty^P\-{cN͡Yanbr$!*գ5k@ X܌*A/Ky/D[+GH!D&AsǞǟ*@`0! bӦ#g||lp0?M/W]يQMCU56 "Yc{օu۶ q26>cy35%'gl|\njr 1Xvy'& m,6mLKC&KLQS>5e_!Y"MOd2Çoڪ| wfeΞ>?rKKvI W75qGXΊII|zUVq8_S˃RRBB]GE娍V.$ H5˽uܹ?c oIN^pXRJ?r+krs(* S sz3G{ :::[iad ҄Lm֞ػמFs3bc55HSbxa$GDn XRfxnM PccJrhd_ܼH__Q\5Hg'&f7}=}[[ZPх qqtK22}m1ai<#amyxTթT<^;[]?߾6iGJ4/!e+ H(t𦭭s(ScZ|4Yww/c2"{]]H$PЯ.]BDaO.`fM"f L2? *wFu=''_~ᵶ٢wOOVD._2LH.FƝ_(JP(ʊG75EXNUC!mnn=s\޻7n"no)b9+0y/J>kloؽ^WWRDz"q[Lf暕+)K7o~=7;C'OrΝ;$]O]n iyy>>3f DoN9cǎo{xtlD"ɓA tscq8žN>+66 3btttlLD+酅 xyy[ά,aw7`0}LxܼԿ^K/'ӳ|gh$ԴtA{FF.8N'y,VG"mbEER㏇PooUS"L͍ʲʲjK{NN˘LYK |f; -Lfvb"f\#OSS -bEEz{{>=w}6nd "f M>1?sS1S |#3FHA0)!V18L&32D)¨'k efba)..STQ@Y(|}YY(2bHubSB$SPbv28) BAF#ԭ,ߴqQHIZ-`0 m,0)OV9C\XIo߻e nnfwr2GOiiLqqÃ]FBB(*/h4 `sh364`lhϚaDZVr~W&4Ԥ{ԩj!8o.̡]99ą?̤Yכ7b~>]*۲i}Fe7]A=O@Krl3ӓKyy\u x>IKg2}ql*:*Mh(A62??[7IIL?eL 3ӓ5v'萐Þ=Y;54FhWWw< IGFv:")7e]DK||L|$FEJ^'$r+ȡpF}Xd|[)!V1%* Htj1S v4E ovqk\NLL8ieXqm*XŔ 3IENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_maptype.png0000644000175000001440000000253012711405154024535 0ustar dalcinlusers00000000000000PNG  IHDRW$~bKGD IDAThoLSW^,fT'bE4Jqj.("NF:?L73B\ u )fZ+H\22EX}`t]->Iw^l6# =lu'f ȥERm,3WX.]jg0l`mel8V^ؙӧSY M܈lu#E-2ȔHoOE]W6nh0Lk~k\֎jyt,ur01܁daA?{層/\`Y.k6|8~j5~j5cGj$[#"K):s*4|[^N^oDUBB(DJDGղ1;S{ӱ7fge;wvtv˸0|Z2rs EZڸa0gK Dk>O=#6=Sr=iilfKBNS.Yqz=%@Ie%oLh>L]C?9¹擂I<\bu:ʀ*5g'7ۼj5ƍz~^OHp06lɓNhP*~)VDEP(~]R-[Gp@٩|uCpCXYYZ'$[{*IڱV4AAvɓyq=aa|w9{*oFۄQ#F8> s\~+Wy.$LoDƪUr(v<0vl^AqEEeehϿ™ۛ{kj0|"W=Ibu:[ӦcnjoO6Ozbq/Pk4d…}3bkwXck^q``~r2_+$׺:=r$_<3&OONY`kYPYӧq=:OZZ~H//4 %%f` ٩{k({7Vhjj޽ohݻ%}o)^C_&=|IX4澮R.._^uY˖&&l2BWt]e䍾>>|m[;s&TUI*fEds݈lu#7o$>#eeag twwclj4sz% `wfVdRHHH;oHH+nD6׍ ZOIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_orderingty.png0000644000175000001440000000334012711405154025244 0ustar dalcinlusers00000000000000PNG  IHDRo$ZdbKGDIDATh{PSW?u"k[ݥngyjU@B- e8ѵ+% b*ҥ.( e[,QDFYYkT ǎMMЦ3s<X, "^郎@scD˗/H$ Id"{>'JxbXxaG__==y: ,r{pGĻ3CCH7Fύsc\&^gW:*J%yE6>=h2:ǻ=/+C4h1548tCo?v,iiLxSk8t(99  {x*!) CCX^7(_~ZxD.wP0ᇩ͵7isJaWq1Ѯ\;iiN9b#G໮.< cj\2F&' FlHtBh*jk;Oؔ߂x(\گӃ``|X3#𳻴fڔ2*>~n, ;ezTcf$,)M+22Xn STUp!"#7o5WxvvsYk}=ljcs^ ĪLk;C~>\TPykoŇsd 23r*+*bCn.fՉh7mr(>l]Kms텅ߺ}[>㝝;|)Hik4!hDc fbݮ== %CFgQk=JBմi$FE at%UUSVScD-xF榤UXx1ռ#GիT;ƺ;l'ϟ/4|~n%$QaLFGCg0” xaʹ鮈OQ<7FύscmGXD~ R)}}}0=D`3 ?d2j9OmQ<7FύvSIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc-module.html0000644000175000001440000006702512711405152023130 0ustar dalcinlusers00000000000000 petsc4py.PETSc
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PETSc for Python
Package petsc4py :: Module PETSc
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[frames] | no frames]

Module PETSc

Portable, Extensible Toolkit for Scientific Computation
Classes [hide private]
  AO
  Comm
  DA
  DM
  DMComposite
  DMDA
  DMPlex
  DMShell
  Error
  IS
  InsertMode
  KSP
  LGMap
  Log
  LogClass
  LogEvent
  LogStage
  Mat
  NormType
  NullSpace
  Object
  Options
Options(prefix=None)
  PC
  Partitioner
  PartitionerType
  Random
  SF
  SNES
  Scatter
  ScatterMode
  Section
  Sys
  TAO
TAO Solver
  TS
  Vec
  Viewer
  ViewerHDF5
  _DMComposite_access
  _DMDA_Vec_array
  _IS_buffer
  _Mat_Stencil
  _Vec_LocalForm
_Vec_LocalForm(Vec gvec) Context manager for Vec local form
  _Vec_buffer
Functions [hide private]
 
_finalize()
 
_initialize(args=None, comm=None)
Variables [hide private]
  COMM_NULL = <petsc4py.PETSc.Comm object at 0x7fea2aa4c510>
  COMM_SELF = <petsc4py.PETSc.Comm object at 0x7fea2aa4c550>
  COMM_WORLD = <petsc4py.PETSc.Comm object at 0x7fea2aa4c590>
  DECIDE = -1
  DEFAULT = -2
  DETERMINE = -1
  INFINITY = 4.49423283716e+307
  NINFINITY = -4.49423283716e+307
  PINFINITY = 4.49423283716e+307
  __arch__ = 'arch-linux2-c-debug'
  __package__ = 'petsc4py'
  __pyx_capi__ = {'GetComm': <capsule object "MPI_Comm (PyObject...
  __type_registry__ = {0: None, 1211212: <type 'petsc4py.PETSc.O...
Variables Details [hide private]

__pyx_capi__

Value:
{'GetComm': <capsule object "MPI_Comm (PyObject *, MPI_Comm)" at 0x7fe\
a3f702960>,
 'GetCommDefault': <capsule object "MPI_Comm (void)" at 0x7fea3f7029c0\
>,
 'PyPetscAO_Get': <capsule object "AO (PyObject *)" at 0x7fea3f706150>\
,
 'PyPetscAO_New': <capsule object "PyObject *(AO)" at 0x7fea3f706120>,
 'PyPetscComm_Get': <capsule object "MPI_Comm (PyObject *)" at 0x7fea3\
...

__type_registry__

Value:
{0: None,
 1211212: <type 'petsc4py.PETSc.Object'>,
 1211214: <type 'petsc4py.PETSc.Viewer'>,
 1211215: <type 'petsc4py.PETSc.Random'>,
 1211216: <type 'petsc4py.PETSc.IS'>,
 1211217: <type 'petsc4py.PETSc.LGMap'>,
 1211218: <type 'petsc4py.PETSc.Section'>,
 1211219: <type 'petsc4py.PETSc.Vec'>,
...

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:46 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.LGMap.MapType-class.html0000644000175000001440000002037212711405154025261 0ustar dalcinlusers00000000000000 petsc4py.PETSc.LGMap.MapType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class LGMap :: Class MapType
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Class MapType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  DROP = 1
  MASK = 0
  __qualname__ = 'GLMapType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_lgmap.png0000644000175000001440000000444112711405154024161 0ustar dalcinlusers00000000000000PNG  IHDRK[;xqbKGDIDATx{LTW<} ؂X \i4 4AKnqڂY|d1n0 l"Dg vJL)B 0# g@nf8r/ s^{=gD!`BEE.ܼy/_+b;T*7uA!Jݰ_oP(\, , , , xe0 ˱`xzzbɒ%8~87xjZ899VwxWYXx1jQQQ#={"P__PūH$Bii)\\\ڵk<^z2v1:ٳg*^YD# ˑυ ((";wh` f3r9fϞ rfH$–-[X|98& ͐J6R)?~}Eqq1PZZ#GXӧOq}Ν;SRPTT2رcJ@ss3_M{s{BABf|EE DS*dܹBFC!$88455qJJJT*%\| !|ZF^%oc֌3 ViVh"y% 444" &"HHBBBhƐ:f%''#33g0x.LpaΜ9V Bh4nQYY ???444pj5  222҂Cʕ+XlBCCʥdjBzz:mfU^\\ҠPSS9s7oƁP[[Zٳ:"ogg'Mc}&D&02}tJ=JF#!1ҥK$00LFL&!rjoo')))d̙ۛl߾ EOIJJ"zBl&V"TɘŻ2PX2YjmVnnn\LY<@TTRSS?ձ ˝ƐL+Mɢɢɢɢյ/j'mo/"66*jWTT ;;JrL ]YSNE\\jXBB˜{8ؘEEEEEEEEEEEEEEEEEEEEEEEEE閖sOǚI @߻F{oɕH$D8:4n'OƖCD$Q.gWX(TM )`(`(ET mc:p#"c]UnÞc,pn0`w>>7"<%-6D}{;ʫ]pYciX:X_|CV^EQXRbv]ibGWsD8\ղ2|V[Od7h[]_%%4Xl|##\NR)~$6g|Sw7/mq,Sw7AA\XшNSWJ|;;qa.Mx  uܷiOU|PFN>odBsB0mbELpqqA|DoC*Fy9VJLqwǏJ%bL2g}0/ pl^Q +K퍩S@O\QAjfh޾ BH_pwsCN]() vͪ~QrvvFҥZSܺe3Ϫ a4?tAxa2!!ߺt _[1So?4޺a^ B!݋[-ɱ%Wp]xW, ϬYntpws ;w@X)rȀ99+kŖ-8`w^=BxJ cĵkS.3<= ޸~~HZ1vqicc};bwFʕH#^DMoP8I mcc*`MW?<B102 J[>ٴaO*Y>f+Rr4LLL $b<GbbY=< petsc4py.PETSc.Section
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Section
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Class Section

Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
addConstraintDof(self, point, numDof)
 
addDof(self, point, numDof)
 
addFieldConstraintDof(self, point, field, numDof)
 
addFieldDof(self, point, field, numDof)
 
clone(self)
 
create(self, comm=None)
 
createGlobalSection(self, SF sf)
 
destroy(self)
 
getChart(self)
 
getConstrainedStorageSize(self)
 
getConstraintDof(self, point)
 
getConstraintIndices(self, point)
 
getDof(self, point)
 
getFieldComponents(self, field)
 
getFieldConstraintDof(self, point, field)
 
getFieldConstraintIndices(self, point, field)
 
getFieldDof(self, point, field)
 
getFieldName(self, field)
 
getMaxDof(self)
 
getNumFields(self)
 
getOffset(self, point)
 
getOffsetRange(self)
 
getStorageSize(self)
 
reset(self)
 
setChart(self, pStart, pEnd)
 
setConstraintDof(self, point, numDof)
 
setConstraintIndices(self, point, indices)
 
setDof(self, point, numDof)
 
setFieldComponents(self, field, numComp)
 
setFieldConstraintDof(self, point, field, numDof)
 
setFieldConstraintIndices(self, point, field, indices)
 
setFieldDof(self, point, field, numDof)
 
setFieldName(self, field, fieldName)
 
setNumFields(self, numFields)
 
setOffset(self, point, offset)
 
setUp(self)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, getType, incRef, incrementTabLevel, query, setAttr, setFromOptions, setName, setOptionsPrefix, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for__vec_buffe.png0000644000175000001440000000236112711405160025140 0ustar dalcinlusers00000000000000PNG  IHDRg$$;bKGDIDAThoLSWm\b(d`-G R,E8@Rf-A#8a"nC0*}pnY΁$XhgݗKnӾ9OﹷoL 1rJ> $<##b$sČ0A& tP(hoI7sr}7s0|%^0ہ},n8H\ ߩ@l>@HSsjN b':Ǐ$o:^>LLVÇxKnawZ_Ǐ9oFㄱ9!!$$pyމ'"4ԗffnR*'ϯ9k1[[Ʉ>-PZUEFkɔVU1<2(_v ofdV??w+֭@2a:0Ч0\+/['kָ'b*Wkxhٶ$*%QQ;"#xm5z`/s[Ϟqk]]di4.nmE0f]Gy=,;q.w:_w[,DFD8Qj.:xe΋Ŝsy?9þ}h7ϥuJ 20nt7MS|^SÍnP{71fMŖJzV~yϪ$8(#؞>@cWsBQz:l6SSv[z= [ׯ'51MHCAEIɴsdeݸb2j>%48]EEl$>'LI/C&*U6>;;&3PzC5U K0gBTyɌ͙E?,THۚ19"F2Gx!uKKEbnrv;AD.wZU P(nn oČd1OIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.KSP.NormType-class.html0000644000175000001440000002525112711405154025155 0ustar dalcinlusers00000000000000 petsc4py.PETSc.KSP.NormType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class KSP :: Class NormType
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Class NormType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  DEFAULT = -1
  NATURAL = 3
  NO = 0
  NONE = 0
  NORM_DEFAULT = -1
  NORM_NATURAL = 3
  NORM_NONE = 0
  NORM_PRECONDITIONED = 1
  NORM_UNPRECONDITIONED = 2
  PRECONDITIONED = 1
  UNPRECONDITIONED = 2
  __qualname__ = 'KSPNormType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_type_2.png0000644000175000001440000000156412711405152024264 0ustar dalcinlusers00000000000000PNG  IHDR=$٥bKGD)IDATXc?L2 #dFFƁvv SQ4ڵp KAVBBWw܆^Z&80n,?XcGdE+ թ$wt|ggϬ la*; / ݜ _g``TKy o߸߸qcF9:uv?NNb0wlܿ߿ P'i+Wn~-+Wj5˗`ggdh//4lkʤ$l^..pT}5΂R"?pMP?ɉY090090Y{^cFmZxޓ'6lH x} 7wzH@T+O썍:&(&$4ZV ڎu7}Pu7|yҥ0'/_b ߿_x\E`ffFp87] :yaIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_sortype.png0000644000175000001440000000325212711405154024565 0ustar dalcinlusers00000000000000PNG  IHDR[$BFbKGD_IDATh}LTW;W\YEk5-fٝ04*XPSSGBi; "F-ET֊횢]"G&23k t@y9{y{dŽ-( 'fٶԃ%KA0w( {ZlL6b±`3у&׷g(8tbf=3䧧?:UCA3fA6n fV>+/ <rS[j--dvrG篱xY)^^m8TYIyn.΅͇ s'ɜ/*BT^FKm7k\ձEGPO0. _'n͹;;wJ>cP*y:2=EE,<Xȁ^38knH''FvV3+0c=F޿--RԕIR6%&JFC9W^! c#="=5IVQ|<5 G3gAAhFVgp0AA$ifѼ*fe  X{{R$o߹C}Q/_zVVkؘ"-3_(>z)^^LJ228lݽm^}ͥoٔ_Kz*f?ǙkgD](pV*qV*J^i)o\iȱӧWą#޺uxOD/Z%=d_D_oo4kRvs:vȧ]"ח7/lAKݝ zzJjW`TU$59dD\}SXVw4I[l(8Jlczyqu2$ك6n mCA<{_#<3e277S<2y0뉏΃Eh~GܮVf6.XVIENDB`petsc4py-3.7.0/docs/apiref/class-tree.html0000644000175000001440000004057412711405152021217 0ustar dalcinlusers00000000000000 Class Hierarchy
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[ Module Hierarchy | Class Hierarchy ]

Class Hierarchy

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:46 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Vec.Type-class.html0000644000175000001440000002756012711405157024411 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Vec.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Vec :: Class Type
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Class Type

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  CUSP = 'cuda'
  MPI = 'mpi'
  MPICUSP = 'mpicuda'
  MPIVIENNACL = 'mpiviennacl'
  NEST = 'nest'
  SEQ = 'seq'
  SEQCUSP = 'seqcuda'
  SEQVIENNACL = 'seqviennacl'
  SHARED = 'shared'
  STANDARD = 'standard'
  VIENNACL = 'viennacl'
  __qualname__ = 'VecType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:51 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.KSP.ConvergedReason-class.html0000644000175000001440000003264512711405153026470 0ustar dalcinlusers00000000000000 petsc4py.PETSc.KSP.ConvergedReason
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PETSc for Python
Package petsc4py :: Module PETSc :: Class KSP :: Class ConvergedReason
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Class ConvergedReason

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  CONVERGED_ATOL = 3
  CONVERGED_ATOL_NORMAL = 9
  CONVERGED_CG_CONSTRAINED = 6
  CONVERGED_CG_NEG_CURVE = 5
  CONVERGED_HAPPY_BREAKDOWN = 8
  CONVERGED_ITERATING = 0
  CONVERGED_ITS = 4
  CONVERGED_RTOL = 2
  CONVERGED_RTOL_NORMAL = 1
  CONVERGED_STEP_LENGTH = 7
  DIVERGED_BREAKDOWN = -5
  DIVERGED_BREAKDOWN_BICG = -6
  DIVERGED_DTOL = -4
  DIVERGED_INDEFINITE_MAT = -10
  DIVERGED_INDEFINITE_PC = -8
  DIVERGED_MAX_IT = -3
  DIVERGED_NANORINF = -9
  DIVERGED_NONSYMMETRIC = -7
  DIVERGED_NULL = -2
  ITERATING = 0
  __qualname__ = 'KSPConvergedReason'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:47 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_sys.png0000644000175000001440000000161012711405157023675 0ustar dalcinlusers00000000000000PNG  IHDR8$SnbKGD=IDATXc?PLbC#dFFƁv##crr2333}Ȁ߿p.C!)+!a;N/?~񂁁m,,Vvu] Pd0d2ӨC qoJ8U}}O']d& k{{e%$߻Tw2 'D7ߖk)*(hgl<|Ӂv: ǡ<w!Y*+/߾ 222zʡnn[k8?ݡCɁyy>~Cy||ʶ>|SW$74;8qs300iXO23[ݻ_rqpá s<=&O -)Qbfb rvK3D}ass>>} +S331gdgd`tr憋a2f]{O۰!58B5z* D=.`ol!* u3o@C Lwy @D}bbILLD2u(^QH0IENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_structure.png0000644000175000001440000000204412711405155025117 0ustar dalcinlusers00000000000000PNG  IHDRU$wibKGDIDAThc?L?HNNfddhxe31vZY% +!a;@n!xK dTg~X{R4Ql@|Vקin[?}?2rqvаq~{OSM  ij O*/tÿ~Hk(7T@Zw;,bb$<~h`I961@C[?}C\M͇ϟ #󧴿_Iѱ?׮Ied,\s%K^ WٳhQwa:!,Ygɓϙs9s_ӧg-;k־SM#/ε52Zy۱*(ww”~}sv&+}}7vƍS**d%$tUU; v=J_߿o>x0\W\W&5~(OOLh"ᖇϟAؚ*B3g..pq~}Cz?.##52`eA/DW \)QϞAnބL Xۛ7p >x1!<\\q>>ee[ɱK"=< |Ea͟~lD0ǧzʔ+w\s'!,,&`Յ+'Mz[<\Iws<=&O 76nc``P14DN " ВSkLJrt̴IH*,D3.4ВeYP@_d#mJKVZ ml0 F?H?K0Ix% ŋ/^U>t$QlԂ%EIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_asmtype.png0000644000175000001440000000314712711405155024546 0ustar dalcinlusers00000000000000PNG  IHDR[$BFbKGDIDATh{LSW?h`/n3LMR:qcЂR18M|/#2c|{܂N]̜M-@Pljq8C B̦ Y Z'9Iz~s߹$In\A#?ۅv%R͛' KڳgO[iV(lWhӧOmhnnGd[!#'GGĸ~"b6Bb.ĩbݶ AYceII yFoD>޲?dA8NcbD24 A;lbgޖptIH3U*1͝kc_n|q#>J%\!61~W_qPy֝;=+'S}0ׯ3flзW/gݖSqKl_Kq1%6ǎKݛ7jRVd_nnh}Ǐ4jG(׻7Wz{ӽ֐Sqif3Aj5:ac4m{y9=jk7j*L&i6䛜tKlb"Vuxj4ʬVQ$37&?8DỲ<9C"vk A3/;lعjE{(,)L ~xtd;FcSJK 1cGAƪTܭ>dRH+s(ٌU8`5wIE/w^fe!Y,H 9W_=[sq&3z[tx8׮a).YOOfGDbRYɩB%%1cx9= Z-֮#ߧq@cSlʬ;{SfŋJM BEu5JJ|n4:.L;0u11<** xWH\bho&?{&VUuBSTĨhN[TR\-:Sz:$Hf^^}8~ZqBb. \ܕtyV(477cZS1u  a72gH7ETTݸ]5.- e< /IENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.LogEvent-class.html0000644000175000001440000004477212711405154024500 0ustar dalcinlusers00000000000000 petsc4py.PETSc.LogEvent
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PETSc for Python
Package petsc4py :: Module PETSc :: Class LogEvent
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Class LogEvent

Instance Methods [hide private]
 
__enter__(self)
 
__exit__(self, *exc)
 
__int__() <==> int(x)
 
__long__() <==> long(x)
a new object with type S, a subtype of T
__new__(S, ...)
 
activate(self)
 
barrierBegin(self, Comm comm=None, *objs)
 
barrierEnd(self, Comm comm=None, *objs)
 
begin(self, *objs)
 
deactivate(self)
 
end(self, *objs)
 
getActive(self)
 
getActiveAll(self)
 
getName(self)
 
getPerfInfo(self, stage=None)
 
setActive(self, flag)
 
setActiveAll(self, flag)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  active
  active_all
  id
  name

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_type_8.png0000644000175000001440000000156412711405156024276 0ustar dalcinlusers00000000000000PNG  IHDR=$٥bKGD)IDATXc?L2 #dFFƁvv SQ4ڵp KAVBBWw܆^Z&80n,?XcGdE+ թ$wt|ggϬ la*; / ݜ _g``TKy o߸߸qcF9:uv?NNb0wlܿ߿ P'i+Wn~-+Wj5˗`ggdh//4lkʤ$l^..pT}5΂R"?pMP?ɉY090090Y{^cFmZxޓ'6lH x} 7wzH@T+O썍:&(&$4ZV ڎu7}Pu7|yҥ0'/_b ߿_x\E`ffFp87] :yaIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Mat-class.html0000644000175000001440000043752712711405154023502 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Mat
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Mat
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Class Mat

Nested Classes [hide private]
  AssemblyType
  FactorShiftType
  InfoType
  Option
  OrderingType
  SORType
  Stencil
  Structure
  Type
Instance Methods [hide private]
 
SOR(self, Vec b, Vec x, omega=1.0, sortype=None, shift=0.0, its=1, lits=1)
 
__add__(y)
x+y
 
__call__(...) <==> x(...)
 
__delitem__(y)
del x[y]
 
__div__(y)
x/y
 
__getitem__(y)
x[y]
 
__iadd__(y)
x+=y
 
__idiv__(y)
x/=y
 
__imul__(y)
x*=y
 
__isub__(y)
x-=y
 
__itruediv__(y)
x/=y
 
__mul__(y)
x*y
 
__neg__()
-x
a new object with type S, a subtype of T
__new__(S, ...)
 
__pos__()
+x
 
__radd__(y)
y+x
 
__rdiv__(y)
y/x
 
__rmul__(y)
y*x
 
__rsub__(y)
y-x
 
__rtruediv__(y)
y/x
 
__setitem__(i, y)
x[i]=y
 
__sub__(y)
x-y
 
__truediv__(y)
x/y
 
assemble(self, assembly=None)
 
assemblyBegin(self, assembly=None)
 
assemblyEnd(self, assembly=None)
 
axpy(self, alpha, Mat X, structure=None)
 
aypx(self, alpha, Mat X, structure=None)
 
chop(self, tol)
 
conjugate(self, Mat out=None)
 
convert(self, mat_type=None, Mat out=None)
 
copy(self, Mat result=None, structure=None)
 
create(self, comm=None)
 
createAIJ(self, size, bsize=None, nnz=None, csr=None, comm=None)
 
createAIJCRL(self, size, bsize=None, nnz=None, csr=None, comm=None)
 
createAIJWithArrays(self, size, csr, bsize=None, comm=None)
 
createBAIJ(self, size, bsize, nnz=None, csr=None, comm=None)
 
createDense(self, size, bsize=None, array=None, comm=None)
 
createLRC(self, Mat A, Mat U, Mat V)
 
createNest(self, mats, isrows=None, iscols=None, comm=None)
 
createNormal(self, Mat mat)
 
createPython(self, size, context=None, comm=None)
 
createSBAIJ(self, size, bsize, nnz=None, csr=None, comm=None)
 
createScatter(self, Scatter scatter, comm=None)
 
createSubMatrix(self, Mat A, IS isrow, IS iscol=None)
 
createTranspose(self, Mat mat)
 
createVecLeft(self)
 
createVecRight(self)
 
createVecs(self, side=None)
 
destroy(self)
 
diagonalScale(self, Vec L=None, Vec R=None)
 
duplicate(self, copy=False)
 
equal(self, Mat mat)
 
factorCholesky(self, IS isperm, options=None)
 
factorICC(self, IS isperm, options=None)
 
factorILU(self, IS isrow, IS iscol, options=None)
 
factorLU(self, IS isrow, IS iscol, options=None)
 
factorNumericCholesky(self, Mat mat, options=None)
 
factorNumericLU(self, Mat mat, options=None)
 
factorSymbolicCholesky(self, IS isperm, options=None)
 
factorSymbolicICC(self, IS isperm, options=None)
 
factorSymbolicILU(self, IS isrow, IS iscol, options=None)
 
factorSymbolicLU(self, Mat mat, IS isrow, IS iscol, options=None)
 
getBlockSize(self)
 
getBlockSizes(self)
 
getColumnIJ(self, symmetric=False, compressed=False)
 
getColumnVector(self, column, Vec result=None)
 
getDenseArray(self)
 
getDenseLocalMatrix(self)
 
getDiagonal(self, Vec result=None)
 
getDiagonalBlock(self)
 
getInertia(self)
 
getInfo(self, info=None)
 
getLocalSize(self)
 
getLocalSubMatrix(self, IS isrow, IS iscol, Mat submat=None)
 
getMumpsCntl(self, icntl)
 
getMumpsIcntl(self, icntl)
 
getMumpsInfo(self, icntl)
 
getMumpsInfog(self, icntl)
 
getMumpsRinfo(self, icntl)
 
getMumpsRinfog(self, icntl)
 
getNearNullSpace(self)
 
getNullSpace(self)
 
getOptionsPrefix(self)
 
getOrdering(self, ord_type)
 
getOwnershipIS(self)
 
getOwnershipRange(self)
 
getOwnershipRangeColumn(self)
 
getOwnershipRanges(self)
 
getOwnershipRangesColumn(self)
 
getPythonContext(self)
 
getRedundantMatrix(self, nsubcomm, subcomm=None, Mat out=None)
 
getRow(self, row)
 
getRowIJ(self, symmetric=False, compressed=False)
 
getRowSum(self, Vec result=None)
 
getSize(self)
 
getSizes(self)
 
getSubMatrices(self, isrows, iscols=None, submats=None)
 
getSubMatrix(self, IS isrow, IS iscol=None, Mat submat=None)
 
getType(self)
 
getValue(self, row, col)
 
getValues(self, rows, cols, values=None)
 
getValuesCSR(self)
 
getVecLeft(self)
 
getVecRight(self)
 
getVecs(self, side=None)
 
imagPart(self, Mat out=None)
 
increaseOverlap(self, IS iset, overlap=1)
 
invertBlockDiagonal(self)
 
isAssembled(self)
 
isHermitian(self, tol=0)
 
isHermitianKnown(self)
 
isStructurallySymmetric(self)
 
isSymmetric(self, tol=0)
 
isSymmetricKnown(self)
 
isTranspose(self, Mat mat=None, tol=0)
 
load(self, Viewer viewer)
 
matMult(self, Mat mat, Mat result=None, fill=None)
 
matMultNumeric(self, Mat mat, Mat result=None)
 
matMultSymbolic(self, Mat mat, fill=None)
 
matSolve(self, Mat B, Mat X)
 
matTransposeMult(self, Mat mat, Mat result=None, fill=None)
 
mult(self, Vec x, Vec y)
 
multAdd(self, Vec x, Vec v, Vec y)
 
multHermitian(self, Vec x, Vec y)
 
multHermitianAdd(self, Vec x, Vec v, Vec y)
 
multTranspose(self, Vec x, Vec y)
 
multTransposeAdd(self, Vec x, Vec v, Vec y)
 
norm(self, norm_type=None)
 
permute(self, IS row, IS col)
 
realPart(self, Mat out=None)
 
reorderForNonzeroDiagonal(self, IS isrow, IS iscol, atol=0)
 
restoreLocalSubMatrix(self, IS isrow, IS iscol, Mat submat)
 
retrieveValues(self)
 
scale(self, alpha)
 
setBlockSize(self, bsize)
 
setBlockSizes(self, row_bsize, col_bsize)
 
setDiagonal(self, Vec diag, addv=None)
 
setFromOptions(self)
 
setLGMap(self, LGMap rmap, LGMap cmap=None)
 
setMumpsCntl(self, icntl, val)
 
setMumpsIcntl(self, icntl, ival)
 
setNearNullSpace(self, NullSpace nsp)
 
setNullSpace(self, NullSpace nsp)
 
setOption(self, option, flag)
 
setOptionsPrefix(self, prefix)
 
setPreallocationCSR(self, csr)
 
setPreallocationDense(self, array)
 
setPreallocationNNZ(self, nnz)
 
setPythonContext(self, context)
 
setPythonType(self, py_type)
 
setSizes(self, size, bsize=None)
 
setStencil(self, dims, starts=None, dof=1)
 
setType(self, mat_type)
 
setUnfactored(self)
 
setUp(self)
 
setValue(self, row, col, value, addv=None)
 
setValueBlockedStencil(self, row, col, value, addv=None)
 
setValueLocal(self, row, col, value, addv=None)
 
setValueStencil(self, row, col, value, addv=None)
 
setValues(self, rows, cols, values, addv=None)
 
setValuesBlocked(self, rows, cols, values, addv=None)
 
setValuesBlockedCSR(self, I, J, V, addv=None)
 
setValuesBlockedIJV(self, I, J, V, addv=None, rowmap=None)
 
setValuesBlockedLocal(self, rows, cols, values, addv=None)
 
setValuesBlockedLocalCSR(self, I, J, V, addv=None)
 
setValuesBlockedLocalIJV(self, I, J, V, addv=None, rowmap=None)
 
setValuesBlockedLocalRCV(self, R, C, V, addv=None)
 
setValuesBlockedRCV(self, R, C, V, addv=None)
 
setValuesCSR(self, I, J, V, addv=None)
 
setValuesIJV(self, I, J, V, addv=None, rowmap=None)
 
setValuesLocal(self, rows, cols, values, addv=None)
 
setValuesLocalCSR(self, I, J, V, addv=None)
 
setValuesLocalIJV(self, I, J, V, addv=None, rowmap=None)
 
setValuesLocalRCV(self, R, C, V, addv=None)
 
setValuesRCV(self, R, C, V, addv=None)
 
shift(self, alpha)
 
solve(self, Vec b, Vec x)
 
solveAdd(self, Vec b, Vec y, Vec x)
 
solveBackward(self, Vec b, Vec x)
 
solveForward(self, Vec b, Vec x)
 
solveTranspose(self, Vec b, Vec x)
 
solveTransposeAdd(self, Vec b, Vec y, Vec x)
 
storeValues(self)
 
transpose(self, Mat out=None)
 
transposeMatMult(self, Mat mat, Mat result=None, fill=None)
 
view(self, Viewer viewer=None)
 
zeroEntries(self)
 
zeroRows(self, rows, diag=1, Vec x=None, Vec b=None)
 
zeroRowsColumns(self, rows, diag=1, Vec x=None, Vec b=None)
 
zeroRowsLocal(self, rows, diag=1, Vec x=None, Vec b=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  assembled
  block_size
  block_sizes
  hermitian
  local_size
  owner_range
  owner_ranges
  size
  sizes
  structsymm
  symmetric

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getOptionsPrefix(self)

 
Overrides: Object.getOptionsPrefix

getType(self)

 
Overrides: Object.getType

setFromOptions(self)

 
Overrides: Object.setFromOptions

setOptionsPrefix(self, prefix)

 
Overrides: Object.setOptionsPrefix

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/toc-petsc4py.lib-module.html0000644000175000001440000000310712711405152023532 0ustar dalcinlusers00000000000000 lib

Module lib

Functions

Import
ImportPETSc
getInitArgs
getPathArch
getPathArchPETSc

Variables

__package__
[hide private] petsc4py-3.7.0/docs/apiref/class_hierarchy_for_ksp.png0000644000175000001440000000412212711405153023651 0ustar dalcinlusers00000000000000PNG  IHDRG[!bKGDIDATx}LGǿ S.{,u<8V(Casu9@)RK,Ym`QkNHp)ll'e]x0Yd_O$<3gݙ!1.Ύ`1P`r(Lõksgm6 2JE677!DiqYLiikLXCɡP`r(L^L&ƍ|rl޼O:;V 7gyVkplM<{ hmmB@[[Q]] Tj՘Bc@ xa1|! WWW@@@/b:222TLlrTUUA.sbL&CUUV]]uA(0 /+L+V2 F& Xz5B!݋a@tt4ѮXaC"̚/Hn Gcc# ,ʔѣG{.q-rBRMMMƩS---6gfkjj,s244DY󛛛@  \R$BFC!$00qݼyH$"ɕ+W.nBir}VgVoذ[,ϢLoo/V\i1>>nV>((AAA mœؤٳg-Jz v4 www7֬YcQ@ FH^8Z]V&rr9|hW Y4=aRy̼Z ttUfryeaw+ L&$h?6K z [ *.b"EEaû"cfnC:æUVΟGjC ]_T|U~~wO+>+{%D ;821'k>W*Qp#<0K cSPx3"=Yy7 q^.ǝv<pʺ:--Egfy{xs##\ڛ54Ptu {W Q^yyxyA"[W J##EͲ VO5L?Ɵ  ߾r.]?**lZDŽ/\MPYWu＃}q-[֭z= kžs|mM];a]Ϝ" 28GSS\L%lL.)߲E25 O鉿<ݱwN|p=?;*.GEa߼GtJ v!1&p9䔕Aa>_F[a79djD 7#(س&CɡP`r(09=_"V9áXΜǏcbb®;HG,3f &Nyui? ֐IENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.KSP-class.html0000644000175000001440000017427312711405153023411 0ustar dalcinlusers00000000000000 petsc4py.PETSc.KSP
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PETSc for Python
Package petsc4py :: Module PETSc :: Class KSP
[hide private]
[frames] | no frames]

Class KSP

Nested Classes [hide private]
  ConvergedReason
  NormType
  Type
Instance Methods [hide private]
 
__call__(...) <==> x(...)
a new object with type S, a subtype of T
__new__(S, ...)
 
buildResidual(self, Vec r=None)
 
buildSolution(self, Vec x=None)
 
callConvergenceTest(self, its, rnorm)
 
cancelMonitor(self)
 
computeEigenvalues(self)
 
computeExtremeSingularValues(self)
 
create(self, comm=None)
 
createPython(self, context=None, comm=None)
 
destroy(self)
 
getAppCtx(self)
 
getComputeEigenvalues(self)
 
getComputeSingularValues(self)
 
getConvergedReason(self)
 
getConvergenceHistory(self)
 
getConvergenceTest(self)
 
getDM(self)
 
getInitialGuessKnoll(self)
 
getInitialGuessNonzero(self)
 
getIterationNumber(self)
 
getMonitor(self)
 
getNormType(self)
 
getOperators(self)
 
getOptionsPrefix(self)
 
getPC(self)
 
getPCSide(self)
 
getPythonContext(self)
 
getResidualNorm(self)
 
getRhs(self)
 
getSolution(self)
 
getTolerances(self)
 
getType(self)
 
getWorkVecs(self, right=None, left=None)
 
logConvergenceHistory(self, rnorm)
 
monitor(self, its, rnorm)
 
reset(self)
 
setAppCtx(self, appctx)
 
setComputeEigenvalues(self, bool flag)
 
setComputeOperators(self, operators, args=None, kargs=None)
 
setComputeRHS(self, rhs, args=None, kargs=None)
 
setComputeSingularValues(self, bool flag)
 
setConvergedReason(self, reason)
 
setConvergenceHistory(self, length=None, reset=False)
 
setConvergenceTest(self, converged, args=None, kargs=None)
 
setDM(self, DM dm)
 
setDMActive(self, bool flag)
 
setFromOptions(self)
 
setGMRESRestart(self, restart)
 
setInitialGuessKnoll(self, bool flag)
 
setInitialGuessNonzero(self, bool flag)
 
setIterationNumber(self, its)
 
setMonitor(self, monitor, args=None, kargs=None)
 
setNormType(self, normtype)
 
setOperators(self, Mat A=None, Mat P=None)
 
setOptionsPrefix(self, prefix)
 
setPC(self, PC pc)
 
setPCSide(self, side)
 
setPythonContext(self, context)
 
setPythonType(self, py_type)
 
setResidualNorm(self, rnorm)
 
setTolerances(self, rtol=None, atol=None, divtol=None, max_it=None)
 
setType(self, ksp_type)
 
setUp(self)
 
setUpOnBlocks(self)
 
setUseFischerGuess(self, model, size)
 
solve(self, Vec b, Vec x)
 
solveTranspose(self, Vec b, Vec x)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  appctx
  atol
  converged
  diverged
  divtol
  dm
  guess_knoll
  guess_nonzero
  history
  iterating
  its
  mat_op
  mat_pc
  max_it
  norm
  norm_type
  pc
  pc_side
  reason
  rtol
  vec_rhs
  vec_sol

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getOptionsPrefix(self)

 
Overrides: Object.getOptionsPrefix

getType(self)

 
Overrides: Object.getType

setFromOptions(self)

 
Overrides: Object.setFromOptions

setOptionsPrefix(self, prefix)

 
Overrides: Object.setOptionsPrefix

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:47 2016 http://epydoc.sourceforge.net
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PETSc for Python
 
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Identifier Index

 [ A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _ ]

A
A
(in Mode)		 ALPHA2
(in Type)		 ASCII_INFO
(in Format)
A11
(in SchurPreType)		 ALWAYS
(in NormSchedule)		 ASCII_INFO_DETAIL
(in Format)
abs()
(in Vec)		 AMD
(in OrderingType)		 ASCII_LATEX
(in Format)
activate()
(in LogClass)		 ANDERSON
(in Type)		 ASCII_MATHEMATICA
(in Format)
activate()
(in LogEvent)		 AO
(in petsc4py.PETSc)		 ASCII_MATLAB
(in Format)
activate()
(in LogStage)		 app2petsc()
(in AO)		 ASCII_MATRIXMARKET
(in Format)
active
(in LogClass)		 appctx
(in KSP)		 ASCII_PCICE
(in Format)
active
(in LogEvent)		 appctx
(in SNES)		 ASCII_PYTHON
(in Format)
active
(in LogStage)		 appctx
(in TAO)		 ASCII_SYMMODU
(in Format)
active_all
(in LogEvent)		 appctx
(in TS)		 ASCII_VTK
(in Format)
ADD
(in InsertMode)		 APPEND
(in Mode)		 ASCII_VTK_CELL
(in Format)
ADD_ALL
(in InsertMode)		 APPEND_UPDATE
(in Mode)		 ASCII_VTK_COORDS
(in Format)
ADD_ALL_VALUES
(in InsertMode)		 apply()
(in LGMap)		 ASCII_XML
(in Format)
ADD_BC
(in InsertMode)		 apply()
(in PC)		 ASFLS
(in Type)
ADD_BC_VALUES
(in InsertMode)		 APPLY_LOWER
(in SORType)		 ASILS
(in Type)
ADD_VALUES
(in InsertMode)		 APPLY_UPPER
(in SORType)		 ASM
(in Type)
addCompositePC()
(in PC)		 applyBlock()
(in LGMap)		 ASMType
(in PC)
addConstraintDof()
(in Section)		 applyBlockInverse()
(in LGMap)		 ASPIN
(in Type)
addDM()
(in DMComposite)		 applyInverse()
(in LGMap)		 assemble()
(in Mat)
addDof()
(in Section)		 applyIS()
(in LGMap)		 assemble()
(in Vec)
addFieldConstraintDof()
(in Section)		 applySymmetricLeft()
(in PC)		 assembled
(in Mat)
addFieldDof()
(in Section)		 applySymmetricRight()
(in PC)		 assemblyBegin()
(in Mat)
addFlops()
(in Log)		 applyTranspose()
(in PC)		 assemblyBegin()
(in Vec)
ADDITIVE
(in CompositeType)		 ARKIMEX
(in Type)		 assemblyEnd()
(in Mat)
ADDITIVE
(in MGType)		 array
(in IS)		 assemblyEnd()
(in Vec)
ADVANCED
(in Type)		 array
(in Vec)		 AssemblyType
(in Mat)
AGG
(in GAMGType)		 array
(in _DMDA_Vec_array)		 atol
(in KSP)
AIJ
(in Type)		 array_r
(in Vec)		 atol
(in SNES)
AIJCRL
(in Type)		 array_w
(in Vec)		 atol
(in TS)
AIJCUSP
(in Type)		 ASCII
(in Type)		 AU
(in Mode)
AIJCUSPARSE
(in Type)		 ASCII()
(in Viewer)		 axpby()
(in Vec)
AIJPERM
(in Type)		 ASCII_COMMON
(in Format)		 axpy()
(in Mat)
AIJVIENNACL
(in Type)		 ASCII_DENSE
(in Format)		 axpy()
(in Vec)
AINVCUSP
(in Type)		 ASCII_FACTOR_INFO
(in Format)		 aypx()
(in Mat)
allGather()
(in IS)		 ASCII_IMPL
(in Format)		 aypx()
(in Vec)
ALPHA
(in Type)		 ASCII_INDEX
(in Format)		  

B
BACKWARD_SWEEP
(in SORType)		 begin()
(in Scatter)		 block_size
(in Vec)
BAIJ
(in Type)		 BEULER
(in Type)		 block_sizes
(in Mat)
Barrier()
(in Comm)		 BFBT
(in Type)		 BLOCKMAT
(in Type)
barrierBegin()
(in LogEvent)		 BICG
(in Type)		 BMRM
(in Type)
barrierEnd()
(in LogEvent)		 BICGSTABCUSP
(in Type)		 boundary_type
(in DMDA)
BASIC
(in Type)		 BINARY
(in Type)		 BoundaryType
(in DM)
BASIC
(in ASMType)		 BINARY()
(in Viewer)		 BOX
(in StencilType)
BASIC
(in GASMType)		 BINARY_MATLAB
(in Format)		 BQPIP
(in Type)
BASIC
(in Type)		 BJACOBI
(in Type)		 BSTRM
(in Type)
BCGS
(in Type)		 BLMVM
(in Type)		 buffer
(in Vec)
BCGSL
(in Type)		 BLOCK
(in Type)		 buffer_r
(in Vec)
BDDC
(in Type)		 block_indices
(in LGMap)		 buffer_w
(in Vec)
BDF
(in Type)		 block_info
(in LGMap)		 buildResidual()
(in KSP)
BE
(in Type)		 block_size
(in IS)		 buildSolution()
(in KSP)
begin()
(in Log)		 block_size
(in LGMap)		  
begin()
(in LogEvent)		 block_size
(in Mat)		  

C
c
(in _Mat_Stencil)		 converged
(in SNES)		 createAIJCRL()
(in Mat)
callConvergenceTest()
(in KSP)		 converged
(in TAO)		 createAIJWithArrays()
(in Mat)
callConvergenceTest()
(in SNES)		 converged
(in TS)		 createASCII()
(in Viewer)
cancelMonitor()
(in KSP)		 CONVERGED_ATOL
(in ConvergedReason)		 createBAIJ()
(in Mat)
cancelMonitor()
(in SNES)		 CONVERGED_ATOL_NORMAL
(in ConvergedReason)		 createBasic()
(in AO)
cancelMonitor()
(in TAO)		 CONVERGED_CG_CONSTRAINED
(in ConvergedReason)		 createBinary()
(in Viewer)
cancelMonitor()
(in TS)		 CONVERGED_CG_NEG_CURVE
(in ConvergedReason)		 createBlock()
(in IS)
CARTESIAN
(in Type)		 CONVERGED_EVENT
(in ConvergedReason)		 createBoxMesh()
(in DMPlex)
CG
(in Type)		 CONVERGED_FNORM_ABS
(in ConvergedReason)		 createCGNS()
(in DMPlex)
CG
(in Type)		 CONVERGED_FNORM_RELATIVE
(in ConvergedReason)		 createCGNSFromFile()
(in DMPlex)
CGLS
(in Type)		 CONVERGED_GATOL
(in Reason)		 createCoarsePointIS()
(in DMPlex)
CGNE
(in Type)		 CONVERGED_GRTOL
(in Reason)		 createCohesiveSubmesh()
(in DMPlex)
CGS
(in Type)		 CONVERGED_GTTOL
(in Reason)		 createCubeBoundary()
(in DMPlex)
CHACO
(in PartitionerType)		 CONVERGED_HAPPY_BREAKDOWN
(in ConvergedReason)		 createDefaultSF()
(in DM)
CHEBYSHEV
(in Type)		 CONVERGED_ITERATING
(in ConvergedReason)		 createDense()
(in Mat)
CHOLESKY
(in Type)		 CONVERGED_ITERATING
(in ConvergedReason)		 createDraw()
(in Viewer)
chop()
(in Mat)		 CONVERGED_ITERATING
(in Reason)		 createExodus()
(in DMPlex)
chop()
(in Vec)		 CONVERGED_ITERATING
(in ConvergedReason)		 createExodusFromFile()
(in DMPlex)
Class()
(in Log)		 CONVERGED_ITS
(in ConvergedReason)		 createFromCellList()
(in DMPlex)
CLASSICAL
(in GAMGType)		 CONVERGED_ITS
(in ConvergedReason)		 createGeneral()
(in IS)
classid
(in Object)		 CONVERGED_ITS
(in ConvergedReason)		 createGhost()
(in Vec)
clear()
(in Options)		 CONVERGED_MINF
(in Reason)		 createGhostWithArray()
(in Vec)
clearDraw()
(in Viewer)		 CONVERGED_RTOL
(in ConvergedReason)		 createGlobalSection()
(in Section)
clearLabelStratum()
(in DM)		 CONVERGED_RTOL_NORMAL
(in ConvergedReason)		 createGlobalVec()
(in DM)
clearLabelValue()
(in DM)		 CONVERGED_SNORM_RELATIVE
(in ConvergedReason)		 createGmsh()
(in DMPlex)
clone()
(in DM)		 CONVERGED_STEP_LENGTH
(in ConvergedReason)		 createHDF5()
(in Viewer)
clone()
(in Section)		 CONVERGED_STEPTOL
(in Reason)		 createHexBoxMesh()
(in DMPlex)
clone()
(in TS)		 CONVERGED_TIME
(in ConvergedReason)		 createInjection()
(in DM)
CN
(in Type)		 CONVERGED_TR_DELTA
(in ConvergedReason)		 createInterpolation()
(in DM)
cnorm
(in TAO)		 CONVERGED_USER
(in Reason)		 createInverse()
(in SF)
coarsen()
(in DM)		 CONVERGED_USER
(in ConvergedReason)		 createIS()
(in LGMap)
coarsenHierarchy()
(in DM)		 ConvergedReason
(in KSP)		 createLabel()
(in DM)
Comm
(in petsc4py.PETSc)		 ConvergedReason
(in SNES)		 createLocalVec()
(in DM)
comm
(in Object)		 ConvergedReason
(in TS)		 createLRC()
(in Mat)
COMM_NULL
(in petsc4py.PETSc)		 convert()
(in DM)		 createMapping()
(in AO)
COMM_SELF
(in petsc4py.PETSc)		 convert()
(in Mat)		 createMat()
(in DM)
COMM_WORLD
(in petsc4py.PETSc)		 copy()
(in IS)		 createMemoryScalable()
(in AO)
complement()
(in IS)		 copy()
(in Mat)		 createMPI()
(in Vec)
compose()
(in Object)		 copy()
(in Scatter)		 createMPIIO()
(in Viewer)
COMPOSITE
(in Type)		 copy()
(in Vec)		 createNaturalVec()
(in DMDA)
COMPOSITE
(in Type)		 corners
(in DMDA)		 createNest()
(in Mat)
COMPOSITE
(in Type)		 CP
(in Type)		 createNest()
(in Vec)
COMPOSITE
(in Type)		 CR
(in Type)		 createNetCDF()
(in Viewer)
CompositeType
(in PC)		 CRANK_NICOLSON
(in Type)		 createNormal()
(in Mat)
computeCellGeometryFVM()
(in DMPlex)		 create()
(in DM)		 createPointNumbering()
(in DMPlex)
computeConstraints()
(in TAO)		 create()
(in DMComposite)		 createPython()
(in KSP)
computeDualVariables()
(in TAO)		 create()
(in DMDA)		 createPython()
(in Mat)
computeEigenvalues()
(in KSP)		 create()
(in DMPlex)		 createPython()
(in PC)
computeExtremeSingularValues()
(in KSP)		 create()
(in DMShell)		 createPython()
(in SNES)
computeFunction()
(in SNES)		 create()
(in IS)		 createPython()
(in TS)
computeGradient()
(in TAO)		 create()
(in KSP)		 createRigidBody()
(in NullSpace)
computeHessian()
(in TAO)		 create()
(in LGMap)		 createSBAIJ()
(in Mat)
computeIFunction()
(in TS)		 create()
(in Mat)		 createScatter()
(in Mat)
computeIJacobian()
(in TS)		 create()
(in NullSpace)		 createSection()
(in DMPlex)
computeJacobian()
(in SNES)		 create()
(in Options)		 createSeq()
(in Vec)
computeJacobian()
(in TAO)		 create()
(in PC)		 createSF()
(in LGMap)
computeObjective()
(in SNES)		 create()
(in Partitioner)		 createShared()
(in Vec)
computeObjective()
(in TAO)		 create()
(in Random)		 createSquareBoundary()
(in DMPlex)
computeObjectiveGradient()
(in TAO)		 create()
(in SF)		 createStride()
(in IS)
computeRHSFunction()
(in TS)		 create()
(in SNES)		 createSubMatrix()
(in Mat)
computeRHSFunctionLinear()
(in TS)		 create()
(in Scatter)		 createTranspose()
(in Mat)
computeRHSJacobian()
(in TS)		 create()
(in Section)		 createVecRight()
(in Mat)
computeRHSJacobianConstant()
(in TS)		 create()
(in TAO)		 createVecs()
(in Mat)
computeSeparableObjective()
(in TAO)		 create()
(in TS)		 createVTK()
(in Viewer)
computeVariableBounds()
(in TAO)		 create()
(in Vec)		 createWithArray()
(in Vec)
conjugate()
(in Mat)		 create()
(in Viewer)		 ctol
(in TAO)
conjugate()
(in Vec)		 create()
(in ViewerHDF5)		 CUSP
(in Type)
CONTINUE_ITERATING
(in Reason)		 createAggregates()
(in DM)		  
converged
(in KSP)		 createAIJ()
(in Mat)		  

D
DA
(in Type)		 destroy()
(in Scatter)		 DIVERGED_MAXFCN
(in Reason)
DAAD
(in Type)		 destroy()
(in Section)		 DIVERGED_MAXITS
(in Reason)
DAE_IMPLICIT_INDEX1
(in EquationType)		 destroy()
(in TAO)		 DIVERGED_NAN
(in Reason)
DAE_IMPLICIT_INDEX2
(in EquationType)		 destroy()
(in TS)		 DIVERGED_NANORINF
(in ConvergedReason)
DAE_IMPLICIT_INDEX3
(in EquationType)		 destroy()
(in Vec)		 DIVERGED_NONLINEAR_SOLVE
(in ConvergedReason)
DAE_IMPLICIT_INDEXHI
(in EquationType)		 destroy()
(in Viewer)		 DIVERGED_NONSYMMETRIC
(in ConvergedReason)
DAE_SEMI_EXPLICIT_INDEX1
(in EquationType)		 DETERMINE
(in petsc4py.PETSc)		 DIVERGED_NULL
(in ConvergedReason)
DAE_SEMI_EXPLICIT_INDEX2
(in EquationType)		 DGMRES
(in Type)		 DIVERGED_STEP_REJECTED
(in ConvergedReason)
DAE_SEMI_EXPLICIT_INDEX3
(in EquationType)		 DIAG
(in SchurFactType)		 DIVERGED_TR_REDUCTION
(in Reason)
DAE_SEMI_EXPLICIT_INDEXHI
(in EquationType)		 diagonalScale()
(in Mat)		 DIVERGED_USER
(in Reason)
deactivate()
(in LogClass)		 difference()
(in IS)		 divtol
(in KSP)
deactivate()
(in LogEvent)		 DIFFERENT
(in Structure)		 DM
(in petsc4py.PETSc)
deactivate()
(in LogStage)		 DIFFERENT_NONZERO_PATTERN
(in Structure)		 dm
(in KSP)
DECIDE
(in petsc4py.PETSc)		 DIFFERENT_NZ
(in Structure)		 dm
(in SNES)
decRef()
(in Object)		 dim
(in DMDA)		 dm
(in TS)
DEFAULT
(in petsc4py.PETSc)		 distribute()
(in DMPlex)		 DMComposite
(in petsc4py.PETSc)
DEFAULT
(in NormType)		 distributeField()
(in DMPlex)		 DMDA
(in petsc4py.PETSc)
DEFAULT
(in NormSchedule)		 distributeOverlap()
(in DMPlex)		 DMPlex
(in petsc4py.PETSc)
DEFAULT
(in Format)		 diverged
(in KSP)		 DMShell
(in petsc4py.PETSc)
delValue()
(in Options)		 diverged
(in SNES)		 dof
(in DMDA)
DENSE
(in Type)		 diverged
(in TAO)		 dot()
(in Vec)
destroy()
(in AO)		 diverged
(in TS)		 dotBegin()
(in Vec)
destroy()
(in DM)		 DIVERGED_BREAKDOWN
(in ConvergedReason)		 dotEnd()
(in Vec)
destroy()
(in IS)		 DIVERGED_BREAKDOWN_BICG
(in ConvergedReason)		 DRAW
(in Type)
destroy()
(in KSP)		 DIVERGED_DTOL
(in ConvergedReason)		 DRAW()
(in Viewer)
destroy()
(in LGMap)		 DIVERGED_FNORM_NAN
(in ConvergedReason)		 DRAW_BASIC
(in Format)
destroy()
(in Log)		 DIVERGED_FUNCTION_COUNT
(in ConvergedReason)		 DRAW_CONTOUR
(in Format)
destroy()
(in Mat)		 DIVERGED_FUNCTION_DOMAIN
(in ConvergedReason)		 DRAW_LG
(in Format)
destroy()
(in NullSpace)		 DIVERGED_INDEFINITE_MAT
(in ConvergedReason)		 DRAW_PORTS
(in Format)
destroy()
(in Object)		 DIVERGED_INDEFINITE_PC
(in ConvergedReason)		 DROP
(in MapType)
destroy()
(in Options)		 DIVERGED_INNER
(in ConvergedReason)		 Dup()
(in Comm)
destroy()
(in PC)		 DIVERGED_LINE_SEARCH
(in ConvergedReason)		 duplicate()
(in DMDA)
destroy()
(in Partitioner)		 DIVERGED_LOCAL_MIN
(in ConvergedReason)		 duplicate()
(in IS)
destroy()
(in Random)		 DIVERGED_LS_FAILURE
(in Reason)		 duplicate()
(in Mat)
destroy()
(in SF)		 DIVERGED_MAX_IT
(in ConvergedReason)		 duplicate()
(in Vec)
destroy()
(in SNES)		 DIVERGED_MAX_IT
(in ConvergedReason)		  

E
EIMEX
(in Type)		 equal()
(in IS)		 Event()
(in Log)
EISENSTAT
(in SORType)		 equal()
(in Mat)		 ExactFinalTime
(in TS)
EISENSTAT
(in Type)		 equal()
(in Vec)		 EXOTIC
(in Type)
ELEMENTAL
(in Type)		 equation_type
(in TS)		 exp()
(in Vec)
ElementType
(in DMDA)		 EquationType
(in TS)		 expand()
(in IS)
embed()
(in IS)		 Error
(in petsc4py.PETSc)		 EXPLICIT
(in EquationType)
end()
(in LogEvent)		 ERROR_LOWER_TRIANGULAR
(in Option)		  
end()
(in Scatter)		 EULER
(in Type)		  

F
factorCholesky()
(in Mat)		 FE
(in Type)		 FORWARD
(in ScatterMode)
factorICC()
(in Mat)		 FFT
(in Type)		 FORWARD_LOCAL
(in ScatterMode)
factorILU()
(in Mat)		 FFTW
(in Type)		 FORWARD_SWEEP
(in SORType)
factorLU()
(in Mat)		 FGMRES
(in Type)		 FRB
(in NormType)
factorNumericCholesky()
(in Mat)		 field
(in _Mat_Stencil)		 Free()
(in Comm)
factorNumericLU()
(in Mat)		 FIELDSPLIT
(in Type)		 FROBENIUS
(in NormType)
FactorShiftType
(in Mat)		 FINAL
(in AssemblyType)		 ftol
(in TAO)
factorSymbolicCholesky()
(in Mat)		 FINAL_ASSEMBLY
(in AssemblyType)		 FULL
(in MGType)
factorSymbolicICC()
(in Mat)		 FINAL_ONLY
(in NormSchedule)		 FULL
(in SchurFactType)
factorSymbolicILU()
(in Mat)		 FLUSH
(in AssemblyType)		 FULL
(in SchurPreType)
factorSymbolicLU()
(in Mat)		 flush()
(in Viewer)		 FULL
(in Size)
FAS
(in Type)		 FLUSH_ASSEMBLY
(in AssemblyType)		 FULL_SIZE
(in Size)
FBCGS
(in Type)		 Format
(in Viewer)		 function
(in TAO)
FBCGSR
(in Type)		 fortran
(in Comm)		  
FCG
(in Type)		 fortran
(in Object)		  

G
GALERKIN
(in Type)		 getGhostRanges()
(in DMDA)		 getPythonContext()
(in PC)
GAMG
(in Type)		 getGlobalISs()
(in DMComposite)		 getPythonContext()
(in SNES)
GAMGType
(in PC)		 getGradient()
(in TAO)		 getPythonContext()
(in TS)
GASM
(in Type)		 getGradientNorm()
(in TAO)		 getRanges()
(in DMDA)
GASMType
(in PC)		 getGraph()
(in SF)		 getReal()
(in Options)
gather()
(in DMComposite)		 getGroup()
(in ViewerHDF5)		 getRedundantMatrix()
(in Mat)
GCR
(in Type)		 getHeightStratum()
(in DMPlex)		 getRefCount()
(in Object)
GENERAL
(in Type)		 getHYPREType()
(in PC)		 getRefinementFactor()
(in DMDA)
generate()
(in DMPlex)		 getIFunction()
(in TS)		 getRefinementLimit()
(in DMPlex)
GEO
(in GAMGType)		 getIJacobian()
(in TS)		 getRefinementUniform()
(in DMPlex)
get_include()
(in petsc4py)		 getIndices()
(in IS)		 getResidualNorm()
(in KSP)
Get_rank()
(in Comm)		 getIndices()
(in LGMap)		 getRhs()
(in KSP)
getAccess()
(in DMComposite)		 getInertia()
(in Mat)		 getRhs()
(in SNES)
getActive()
(in LogClass)		 getInfo()
(in IS)		 getRHSFunction()
(in TS)
getActive()
(in LogEvent)		 getInfo()
(in LGMap)		 getRHSJacobian()
(in TS)
getActive()
(in LogStage)		 getInfo()
(in Mat)		 getRow()
(in Mat)
getActiveAll()
(in LogEvent)		 getInitArgs()
(in petsc4py.lib)		 GETROW_UPPERTRIANGULAR
(in Option)
getAll()
(in Options)		 getInitialGuess()
(in SNES)		 getRowIJ()
(in Mat)
getAlphaParams()
(in TS)		 getInitialGuessKnoll()
(in KSP)		 getRowSum()
(in Mat)
getAO()
(in DMDA)		 getInitialGuessNonzero()
(in KSP)		 getScalar()
(in Options)
getAppCtx()
(in DM)		 getInt()
(in Options)		 getScatter()
(in DMDA)
getAppCtx()
(in KSP)		 getInterpolationType()
(in DMDA)		 getSeed()
(in Random)
getAppCtx()
(in SNES)		 getInterval()
(in Random)		 getSize()
(in Comm)
getAppCtx()
(in TAO)		 getIterationNumber()
(in KSP)		 getSize()
(in IS)
getAppCtx()
(in TS)		 getIterationNumber()
(in SNES)		 getSize()
(in LGMap)
getArray()
(in Vec)		 getIterationNumber()
(in TAO)		 getSize()
(in Mat)
getASMSubKSP()
(in PC)		 getJacobian()
(in SNES)		 getSize()
(in Vec)
getAttr()
(in Object)		 getJoin()
(in DMPlex)		 getSizes()
(in DMDA)
getBlockIndices()
(in IS)		 getKSP()
(in PC)		 getSizes()
(in IS)
getBlockIndices()
(in LGMap)		 getKSP()
(in SNES)		 getSizes()
(in Mat)
getBlockInfo()
(in LGMap)		 getKSP()
(in TAO)		 getSizes()
(in Vec)
getBlockSize()
(in DM)		 getKSP()
(in TS)		 getSNES()
(in TS)
getBlockSize()
(in IS)		 getKSPIterations()
(in TS)		 getSNESFailures()
(in TS)
getBlockSize()
(in LGMap)		 getLabelIdIS()
(in DM)		 getSNESIterations()
(in TS)
getBlockSize()
(in Mat)		 getLabelName()
(in DM)		 getSolution()
(in KSP)
getBlockSize()
(in Vec)		 getLabelOutput()
(in DM)		 getSolution()
(in SNES)
getBlockSizes()
(in Mat)		 getLabelSize()
(in DM)		 getSolution()
(in TAO)
getBool()
(in Options)		 getLabelValue()
(in DM)		 getSolution()
(in TS)
getBoundaryType()
(in DMDA)		 getLGMap()
(in DM)		 getSolutionNorm()
(in TAO)
getBoundingBox()
(in DMDA)		 getLGMaps()
(in DMComposite)		 getSolutionStatus()
(in TAO)
getBuffer()
(in Vec)		 getLinearSolveFailures()
(in SNES)		 getSolutionUpdate()
(in SNES)
getCellNumbering()
(in DMPlex)		 getLinearSolveIterations()
(in SNES)		 getSolveTime()
(in TS)
getChart()
(in DMPlex)		 getLMVMH0()
(in TAO)		 getStencil()
(in DMDA)
getChart()
(in Section)		 getLMVMH0KSP()
(in TAO)		 getStencilType()
(in DMDA)
getClassId()
(in Object)		 getLocalBoundingBox()
(in DMDA)		 getStencilWidth()
(in DMDA)
getClassName()
(in Object)		 getLocalISs()
(in DMComposite)		 getStepFailures()
(in SNES)
getColumnIJ()
(in Mat)		 getLocalSize()
(in IS)		 getStepNumber()
(in TS)
getColumnVector()
(in Mat)		 getLocalSize()
(in Mat)		 getStepRejections()
(in TS)
getComm()
(in Object)		 getLocalSize()
(in Vec)		 getStorageSize()
(in Section)
getCompositeNumber()
(in SNES)		 getLocalSubMatrix()
(in Mat)		 getStratumIS()
(in DM)
getCompositePC()
(in PC)		 getMaxDof()
(in Section)		 getStratumSize()
(in DM)
getCompositeSNES()
(in SNES)		 getMaxFunctionEvaluations()
(in SNES)		 getStride()
(in IS)
getComputeEigenvalues()
(in KSP)		 getMaxKSPFailures()
(in SNES)		 getString()
(in Options)
getComputeSingularValues()
(in KSP)		 getMaxSizes()
(in DMPlex)		 getSubMatrices()
(in Mat)
getCone()
(in DMPlex)		 getMaxStepFailures()
(in SNES)		 getSubMatrix()
(in Mat)
getConeOrientation()
(in DMPlex)		 getMaxSteps()
(in TS)		 getSubVector()
(in Vec)
getConeSize()
(in DMPlex)		 getMaxTime()
(in TS)		 getSupport()
(in DMPlex)
getConstrainedStorageSize()
(in Section)		 getMeet()
(in DMPlex)		 getSupportSize()
(in DMPlex)
getConstraintDof()
(in Section)		 getMGCoarseSolve()
(in PC)		 getTabLevel()
(in Object)
getConstraintIndices()
(in Section)		 getMGInterpolation()
(in PC)		 getTheta()
(in TS)
getConstraintTolerances()
(in TAO)		 getMGLevels()
(in PC)		 getThetaEndpoint()
(in TS)
getConvergedReason()
(in KSP)		 getMGRestriction()
(in PC)		 getTime()
(in Log)
getConvergedReason()
(in SNES)		 getMGRScale()
(in PC)		 getTime()
(in TS)
getConvergedReason()
(in TAO)		 getMGSmoother()
(in PC)		 getTimeStep()
(in TS)
getConvergedReason()
(in TS)		 getMGSmootherDown()
(in PC)		 getTimestep()
(in ViewerHDF5)
getConvergenceHistory()
(in KSP)		 getMGSmootherUp()
(in PC)		 getTolerances()
(in KSP)
getConvergenceHistory()
(in SNES)		 getMGType()
(in PC)		 getTolerances()
(in SNES)
getConvergenceTest()
(in KSP)		 getMonitor()
(in KSP)		 getTolerances()
(in TAO)
getConvergenceTest()
(in SNES)		 getMonitor()
(in SNES)		 getTolerances()
(in TS)
getConvergenceTest()
(in TAO)		 getMonitor()
(in TAO)		 getTotalSteps()
(in TS)
getCoordinateDM()
(in DM)		 getMonitor()
(in TS)		 getTransitiveClosure()
(in DMPlex)
getCoordinateName()
(in DMDA)		 getMulti()
(in SF)		 getType()
(in AO)
getCoordinates()
(in DM)		 getMumpsCntl()
(in Mat)		 getType()
(in DM)
getCoordinateSection()
(in DM)		 getMumpsIcntl()
(in Mat)		 getType()
(in IS)
getCoordinatesLocal()
(in DM)		 getMumpsInfo()
(in Mat)		 getType()
(in KSP)
getCorners()
(in DMDA)		 getMumpsInfog()
(in Mat)		 getType()
(in Mat)
getCPUTime()
(in Log)		 getMumpsRinfo()
(in Mat)		 getType()
(in Object)
getCUDAHandle()
(in Vec)		 getMumpsRinfog()
(in Mat)		 getType()
(in PC)
getDefaultComm()
(in Sys)		 getName()
(in LogClass)		 getType()
(in Partitioner)
getDefaultGlobalSection()
(in DM)		 getName()
(in LogEvent)		 getType()
(in Random)
getDefaultSection()
(in DM)		 getName()
(in LogStage)		 getType()
(in SF)
getDefaultSF()
(in DM)		 getName()
(in Object)		 getType()
(in SNES)
getDenseArray()
(in Mat)		 getNearNullSpace()
(in Mat)		 getType()
(in TAO)
getDenseLocalMatrix()
(in Mat)		 getNestSubVecs()
(in Vec)		 getType()
(in TS)
getDepth()
(in DMPlex)		 getNormSchedule()
(in SNES)		 getType()
(in Vec)
getDepthStratum()
(in DMPlex)		 getNormType()
(in KSP)		 getType()
(in Viewer)
getDiagonal()
(in Mat)		 getNPC()
(in SNES)		 getUpdate()
(in SNES)
getDiagonalBlock()
(in Mat)		 getNullSpace()
(in Mat)		 getUseEW()
(in SNES)
getDict()
(in Object)		 getNumber()
(in DMComposite)		 getUseFD()
(in SNES)
getDim()
(in DMDA)		 getNumFields()
(in Section)		 getUseMF()
(in SNES)
getDimension()
(in DM)		 getNumLabels()
(in DM)		 getValue()
(in Mat)
getDM()
(in KSP)		 getObjective()
(in SNES)		 getValue()
(in Random)
getDM()
(in PC)		 getOffset()
(in Section)		 getValue()
(in Vec)
getDM()
(in SNES)		 getOffsetRange()
(in Section)		 getValueReal()
(in Random)
getDM()
(in TS)		 getOperators()
(in KSP)		 getValues()
(in Mat)
getDof()
(in DMDA)		 getOperators()
(in PC)		 getValues()
(in Vec)
getDof()
(in Section)		 getOptionsPrefix()
(in KSP)		 getValuesCSR()
(in Mat)
getDuration()
(in TS)		 getOptionsPrefix()
(in Mat)		 getVariableBounds()
(in TAO)
getElements()
(in DMDA)		 getOptionsPrefix()
(in Object)		 getVecArray()
(in DMDA)
getElementType()
(in DMDA)		 getOptionsPrefix()
(in PC)		 getVecLeft()
(in Mat)
getEntries()
(in DMComposite)		 getOptionsPrefix()
(in SNES)		 getVecs()
(in NullSpace)
getEquationType()
(in TS)		 getOptionsPrefix()
(in TAO)		 getVersion()
(in Sys)
getFactorMatrix()
(in PC)		 getOptionsPrefix()
(in TS)		 getVersionInfo()
(in Sys)
getFactorSolverPackage()
(in PC)		 getOptionsPrefix()
(in Vec)		 getVertexNumbering()
(in DMPlex)
getFASCoarseSolve()
(in SNES)		 getOrdering()
(in DMPlex)		 getVIInactiveSet()
(in SNES)
getFASCycleSNES()
(in SNES)		 getOrdering()
(in Mat)		 getVisible()
(in LogStage)
getFASInjection()
(in SNES)		 getOwnershipIS()
(in Mat)		 getWorkVecs()
(in KSP)
getFASInterpolation()
(in SNES)		 getOwnershipRange()
(in Mat)		 ghost_corners
(in DMDA)
getFASLevels()
(in SNES)		 getOwnershipRange()
(in Vec)		 ghost_ranges
(in DMDA)
getFASRestriction()
(in SNES)		 getOwnershipRangeColumn()
(in Mat)		 GHOSTED
(in BoundaryType)
getFASSmoother()
(in SNES)		 getOwnershipRanges()
(in DMDA)		 ghostUpdate()
(in Vec)
getFASSmootherDown()
(in SNES)		 getOwnershipRanges()
(in Mat)		 ghostUpdateBegin()
(in Vec)
getFASSmootherUp()
(in SNES)		 getOwnershipRanges()
(in Vec)		 ghostUpdateEnd()
(in Vec)
getFieldComponents()
(in Section)		 getOwnershipRangesColumn()
(in Mat)		 GL
(in Type)
getFieldConstraintDof()
(in Section)		 getParamsEW()
(in SNES)		 GLOBAL_MAX
(in InfoType)
getFieldConstraintIndices()
(in Section)		 getPartitioner()
(in DMPlex)		 GLOBAL_SUM
(in InfoType)
getFieldDof()
(in Section)		 getPathArch()
(in petsc4py.lib)		 globalToLocal()
(in DM)
getFieldName()
(in DMDA)		 getPathArchPETSc()
(in petsc4py.lib)		 globalToNatural()
(in DMDA)
getFieldName()
(in Section)		 getPC()
(in KSP)		 GLTR
(in Type)
getFieldSplitSubKSP()
(in PC)		 getPCSide()
(in KSP)		 GMRES
(in Type)
getFileMode()
(in Viewer)		 getPerfInfo()
(in LogEvent)		 gnorm
(in TAO)
getFileName()
(in Viewer)		 getPointSF()
(in DM)		 GPCG
(in Type)
getFlops()
(in Log)		 getPostStep()
(in TS)		 gradient
(in TAO)
getFormat()
(in Viewer)		 getPreStep()
(in TS)		 GROPPCG
(in Type)
getFunction()
(in NullSpace)		 getPrevTime()
(in TS)		 gtol
(in TAO)
getFunction()
(in SNES)		 getProblemType()
(in TS)		 guess_knoll
(in KSP)
getFunctionEvaluations()
(in SNES)		 getProcSizes()
(in DMDA)		 guess_nonzero
(in KSP)
getFunctionValue()
(in TAO)		 getPythonContext()
(in KSP)		  
getGhostCorners()
(in DMDA)		 getPythonContext()
(in Mat)		  

H
HALF
(in Size)		 hasNPC()
(in SNES)		 history
(in SNES)
HALF_SIZE
(in Size)		 HDF5
(in Type)		 HYPRE
(in Type)
handle
(in Object)		 HDF5_VIZ
(in Format)		 HYPRESSTRUCT
(in Type)
hasConstant()
(in NullSpace)		 HERMITIAN
(in Option)		 HYPRESTRUCT
(in Type)
hasLabel()
(in DM)		 hermitian
(in Mat)		  
hasName()
(in Options)		 history
(in KSP)		  

I
i
(in _Mat_Stencil)		 INFINITY
(in NormType)		 isAssembled()
(in Mat)
IBCGS
(in Type)		 info
(in LGMap)		 isaxpy()
(in Vec)
ICC
(in Type)		 infoAllow()
(in Sys)		 isFinalized()
(in Sys)
id
(in LogClass)		 InfoType
(in Mat)		 isHermitian()
(in Mat)
id
(in LogEvent)		 init()
(in petsc4py)		 isHermitianKnown()
(in Mat)
id
(in LogStage)		 INITIAL_FINAL_ONLY
(in NormSchedule)		 isIdentity()
(in IS)
identity
(in IS)		 INITIAL_ONLY
(in NormSchedule)		 isInitialized()
(in Sys)
IGNORE_LOWER_TRIANGULAR
(in Option)		 INSERT
(in InsertMode)		 isPermutation()
(in IS)
IGNORE_NEGATIVE_INDICES
(in Option)		 INSERT_ALL
(in InsertMode)		 isset()
(in Vec)
IGNORE_OFF_PROC_ENTRIES
(in Option)		 INSERT_ALL_VALUES
(in InsertMode)		 isSorted()
(in IS)
IGNORE_OFF_PROC_ENTRIES
(in Option)		 INSERT_BC
(in InsertMode)		 isStructurallySymmetric()
(in Mat)
IGNORE_ZERO_ENTRIES
(in Option)		 INSERT_BC_VALUES
(in InsertMode)		 isSymmetric()
(in Mat)
ILU
(in Type)		 INSERT_VALUES
(in InsertMode)		 isSymmetricKnown()
(in Mat)
imagPart()
(in Mat)		 insertCone()
(in DMPlex)		 isTranspose()
(in Mat)
IMPLICIT
(in EquationType)		 insertConeOrientation()
(in DMPlex)		 ITERATING
(in ConvergedReason)
Import()
(in petsc4py.lib)		 InsertMode
(in petsc4py.PETSc)		 iterating
(in KSP)
ImportPETSc()
(in petsc4py.lib)		 INTERPOLATE
(in ASMType)		 ITERATING
(in ConvergedReason)
INBLOCKS
(in FactorShiftType)		 INTERPOLATE
(in GASMType)		 iterating
(in SNES)
increaseOverlap()
(in Mat)		 INTERPOLATE
(in ExactFinalTime)		 ITERATING
(in Reason)
incRef()
(in Object)		 interpolate()
(in TS)		 iterating
(in TAO)
incrementTabLevel()
(in Object)		 InterpolationType
(in DMDA)		 ITERATING
(in ConvergedReason)
incrementTimestep()
(in ViewerHDF5)		 interval
(in Random)		 iterating
(in TS)
index
(in _Mat_Stencil)		 invertBlockDiagonal()
(in Mat)		 its
(in KSP)
indices
(in IS)		 invertPermutation()
(in IS)		 its
(in SNES)
indices
(in LGMap)		 IPM
(in Type)		 its
(in TAO)
INF
(in NormType)		 IS
(in petsc4py.PETSc)		  
INFINITY
(in petsc4py.PETSc)		 IS
(in Type)		  

J
j
(in _Mat_Stencil)		 JACOBI
(in Type)		  
   

K
k
(in _Mat_Stencil)		 klass
(in Object)		 ksp
(in TAO)
KACZMARZ
(in Type)		 KSP
(in petsc4py.PETSc)		 ksp
(in TS)
KASKADE
(in MGType)		 KSP
(in Type)		 KSPONLY
(in Type)
KEEP_NONZERO_PATTERN
(in Option)		 ksp
(in SNES)		  

L
L
(in Side)		 LOCAL
(in InfoType)		 LogClass
(in petsc4py.PETSc)
LCD
(in Type)		 LOCAL_BACKWARD_SWEEP
(in SORType)		 logConvergenceHistory()
(in KSP)
LCL
(in Type)		 LOCAL_FORWARD_SWEEP
(in SORType)		 logConvergenceHistory()
(in SNES)
LEFT
(in Side)		 local_size
(in IS)		 LogEvent
(in petsc4py.PETSc)
LGMap
(in petsc4py.PETSc)		 local_size
(in Mat)		 logFlops()
(in Log)
LGMRES
(in Type)		 local_size
(in Vec)		 LogStage
(in petsc4py.PETSc)
lib
(in petsc4py)		 LOCAL_SYMMETRIC_SWEEP
(in SORType)		 LOWER
(in SchurFactType)
LINEAR
(in ProblemType)		 localForm()
(in Vec)		 LRC
(in Type)
LMVM
(in Type)		 LOCALREF
(in Type)		 LSC
(in Type)
load()
(in IS)		 localToGlobal()
(in DM)		 LSQR
(in Type)
load()
(in Mat)		 localToLocal()
(in DM)		 LU
(in Type)
load()
(in TS)		 Log
(in petsc4py.PETSc)		  
load()
(in Vec)		 log()
(in Vec)		  

M
MAIJ
(in Type)		 MAX_VALUES
(in InsertMode)		 MPIAIJCUSPARSE
(in Type)
MAPPING
(in Type)		 maxPointwiseDivide()
(in Vec)		 MPIAIJPERM
(in Type)
MapType
(in LGMap)		 maxpy()
(in Vec)		 MPIAIJVIENNACL
(in Type)
markBoundaryFaces()
(in DMPlex)		 mDot()
(in Vec)		 MPIBAIJ
(in Type)
MASK
(in MapType)		 mDotBegin()
(in Vec)		 MPIBSTRM
(in Type)
Mat
(in petsc4py.PETSc)		 mDotEnd()
(in Vec)		 MPICUSP
(in Type)
MAT
(in Type)		 MEMORYSCALABLE
(in Type)		 MPIDENSE
(in Type)
mat_op
(in KSP)		 MFFD
(in Type)		 MPIMAIJ
(in Type)
mat_pc
(in KSP)		 MG
(in Type)		 MPISBAIJ
(in Type)
MATCHSTEP
(in ExactFinalTime)		 MGType
(in PC)		 MPISBSTRM
(in Type)
MATHEMATICA
(in Type)		 MIMEX
(in Type)		 MPIVIENNACL
(in Type)
MATLAB
(in Type)		 min()
(in Vec)		 MS
(in Type)
matMult()
(in Mat)		 MINRES
(in Type)		 mtDot()
(in Vec)
matMultNumeric()
(in Mat)		 MIRROR
(in BoundaryType)		 mtDotBegin()
(in Vec)
matMultSymbolic()
(in Mat)		 ML
(in Type)		 mtDotEnd()
(in Vec)
matSolve()
(in Mat)		 MOAB
(in Type)		 mult()
(in Mat)
matTransposeMult()
(in Mat)		 Mode
(in Viewer)		 multAdd()
(in Mat)
MAX
(in InsertMode)		 monitor()
(in KSP)		 multHermitian()
(in Mat)
MAX
(in NormType)		 monitor()
(in SNES)		 multHermitianAdd()
(in Mat)
max()
(in Vec)		 monitor()
(in TS)		 MULTIPLICATIVE
(in CompositeType)
max_funcs
(in SNES)		 MPI
(in Type)		 MULTIPLICATIVE
(in MGType)
max_it
(in KSP)		 MPIADJ
(in Type)		 multTranspose()
(in Mat)
max_it
(in SNES)		 MPIAIJ
(in Type)		 multTransposeAdd()
(in Mat)
max_steps
(in TS)		 MPIAIJCRL
(in Type)		  
max_time
(in TS)		 MPIAIJCUSP
(in Type)		  

N
N1
(in NormType)		 NINFINITY
(in petsc4py.PETSc)		 NORM_FROBENIUS
(in NormType)
N12
(in NormType)		 NLS
(in Type)		 NORM_INFINITY
(in NormType)
N2
(in NormType)		 NM
(in Type)		 NORM_INITIAL_FINAL_ONLY
(in NormSchedule)
name
(in LogClass)		 NN
(in Type)		 NORM_INITIAL_ONLY
(in NormSchedule)
name
(in LogEvent)		 NO
(in NormType)		 NORM_MAX
(in NormType)
name
(in LogStage)		 NO_OFF_PROC_ENTRIES
(in Option)		 NORM_NATURAL
(in NormType)
name
(in Object)		 NO_OFF_PROC_ZERO_ROWS
(in Option)		 NORM_NONE
(in NormType)
NASH
(in Type)		 NOFORMAT
(in Format)		 NORM_NONE
(in NormSchedule)
NASM
(in Type)		 NONE
(in BoundaryType)		 NORM_PRECONDITIONED
(in NormType)
NATIVE
(in Format)		 NONE
(in NormType)		 norm_type
(in KSP)
NATURAL
(in NormType)		 NONE
(in FactorShiftType)		 NORM_UNPRECONDITIONED
(in NormType)
NATURAL
(in OrderingType)		 NONE
(in ASMType)		 NORMAL
(in Type)
naturalToGlobal()
(in DMDA)		 NONE
(in GASMType)		 NORMALHERMITIAN
(in Type)
NCG
(in Type)		 NONE
(in Type)		 normalize()
(in Vec)
ND
(in OrderingType)		 NONE
(in NormSchedule)		 normBegin()
(in Vec)
NEST
(in Type)		 NONLINEAR
(in ProblemType)		 normEnd()
(in Vec)
NEST
(in Type)		 NONZERO
(in FactorShiftType)		 NormSchedule
(in SNES)
NETCDF
(in Type)		 norm
(in KSP)		 NormType
(in KSP)
NETWORK
(in Type)		 norm()
(in Mat)		 NormType
(in petsc4py.PETSc)
NEW_DIAGONALS
(in Option)		 norm()
(in Vec)		 NOT_SET_VALUES
(in InsertMode)
NEW_NONZERO_ALLOCATION_ERR
(in Option)		 NORM_1
(in NormType)		 npc
(in SNES)
NEW_NONZERO_LOCATION_ERR
(in Option)		 NORM_1_AND_2
(in NormType)		 NRICHARDSON
(in Type)
NEW_NONZERO_LOCATIONS
(in Option)		 NORM_2
(in NormType)		 NTL
(in Type)
NEWTONLS
(in Type)		 NORM_ALWAYS
(in NormSchedule)		 NTR
(in Type)
NEWTONTR
(in Type)		 NORM_DEFAULT
(in NormType)		 NullSpace
(in petsc4py.PETSc)
NGMRES
(in Type)		 NORM_DEFAULT
(in NormSchedule)		 NZ
(in FactorShiftType)
NGS
(in Type)		 NORM_FINAL_ONLY
(in NormSchedule)		  

O
Object
(in petsc4py.PETSc)		 Option
(in Vec)		 OWLQN
(in Type)
objective
(in TAO)		 Options
(in petsc4py.PETSc)		 owner_range
(in Mat)
ODE_EXPLICIT
(in EquationType)		 OrderingType
(in Mat)		 owner_range
(in Vec)
ODE_IMPLICIT
(in EquationType)		 orient()
(in DMPlex)		 owner_ranges
(in Mat)
Option
(in Mat)		 OWD
(in OrderingType)		 owner_ranges
(in Vec)

P
P1
(in ElementType)		 PINFINITY
(in petsc4py.PETSc)		 PRECONDITIONED
(in NormType)
PARMETIS
(in PartitionerType)		 PIPECG
(in Type)		 prefix
(in Object)
PARMS
(in Type)		 PIPECGRR
(in Type)		 prefix
(in Options)
Partitioner
(in petsc4py.PETSc)		 PIPECR
(in Type)		 prefixPop()
(in Options)
PartitionerType
(in petsc4py.PETSc)		 PIPEFCG
(in Type)		 prefixPush()
(in Options)
PATCH
(in Type)		 PIPEFGMRES
(in Type)		 PREONLY
(in Type)
PBJACOBI
(in Type)		 PIPEGCR
(in Type)		 Print()
(in Sys)
pc
(in KSP)		 placeArray()
(in Vec)		 problem_type
(in TS)
PC
(in petsc4py.PETSc)		 PLEX
(in Type)		 ProblemType
(in TS)
pc_side
(in KSP)		 pointwiseDivide()
(in Vec)		 proc_sizes
(in DMDA)
PD
(in FactorShiftType)		 pointwiseMax()
(in Vec)		 PSEUDO
(in Type)
PERIODIC
(in BoundaryType)		 pointwiseMaxAbs()
(in Vec)		 push()
(in LogStage)
permutation
(in IS)		 pointwiseMin()
(in Vec)		 pushErrorHandler()
(in Sys)
permute()
(in DMPlex)		 pointwiseMult()
(in Vec)		 pushFormat()
(in Viewer)
permute()
(in Mat)		 pop()
(in LogStage)		 pushGroup()
(in ViewerHDF5)
permute()
(in Vec)		 popErrorHandler()
(in Sys)		 PYTHON
(in Type)
PETSc
(in petsc4py)		 popFormat()
(in Viewer)		 PYTHON
(in Type)
petsc2app()
(in AO)		 popGroup()
(in ViewerHDF5)		 PYTHON
(in Type)
petsc4py POSITIVE_DEFINITE
(in FactorShiftType)		 PYTHON
(in Type)
PFMG
(in Type)		 POUNDERS
(in Type)		 PYTHON
(in Type)
PGMRES
(in Type)		 PREALLOCATOR
(in Type)		  

Q
Q0
(in InterpolationType)		 QCG
(in Type)		 QUARTER
(in Size)
Q1
(in ElementType)		 QMD
(in OrderingType)		 QUARTER_SIZE
(in Size)
Q1
(in InterpolationType)		 QN
(in Type)		 query()
(in Object)

R
R
(in Side)		 REDUNDANT
(in Type)		 restoreSubVector()
(in Vec)
R
(in Mode)		 REDUNDANT
(in Type)		 RESTRICT
(in ASMType)
RAND
(in Type)		 refcount
(in Object)		 RESTRICT
(in GASMType)
RAND48
(in Type)		 refine()
(in DM)		 retrieveValues()
(in Mat)
RANDER48
(in Type)		 refineHierarchy()
(in DM)		 REVERSE
(in ScatterMode)
Random
(in petsc4py.PETSc)		 registerCitation()
(in Sys)		 REVERSE_LOCAL
(in ScatterMode)
ranges
(in DMDA)		 remove()
(in NullSpace)		 RICHARDSON
(in Type)
rank
(in Comm)		 removeLabel()
(in DM)		 RIGHT
(in Side)
RCM
(in OrderingType)		 reorderForNonzeroDiagonal()
(in Mat)		 RK
(in Type)
READ
(in Mode)		 reset()
(in KSP)		 rollBack()
(in TS)
realPart()
(in Mat)		 reset()
(in PC)		 ROSW
(in Type)
reason
(in KSP)		 reset()
(in SF)		 ROW_ORIENTED
(in Option)
reason
(in SNES)		 reset()
(in SNES)		 ROWLENGTH
(in OrderingType)
Reason
(in TAO)		 reset()
(in Section)		 rtol
(in KSP)
reason
(in TAO)		 reset()
(in TS)		 rtol
(in SNES)
reason
(in TS)		 resetArray()
(in Vec)		 rtol
(in TS)
reciprocal()
(in Vec)		 restoreCUDAHandle()
(in Vec)		 RUNGE_KUTTA
(in Type)
REDISTRIBUTE
(in Type)		 restoreLocalSubMatrix()
(in Mat)		  

S
S
(in Side)		 setGAMGLevels()
(in PC)		 setType()
(in SF)
SACUSP
(in Type)		 setGAMGSmooths()
(in PC)		 setType()
(in SNES)
SACUSPPOLY
(in Type)		 setGAMGType()
(in PC)		 setType()
(in TAO)
SAME
(in Structure)		 setGASMOverlap()
(in PC)		 setType()
(in TS)
SAME
(in Type)		 setGASMType()
(in PC)		 setType()
(in Vec)
SAME_NONZERO_PATTERN
(in Structure)		 setGlobalToLocal()
(in DMShell)		 setType()
(in Viewer)
SAME_NZ
(in Structure)		 setGlobalToLocalVecScatter()
(in DMShell)		 setUnfactored()
(in Mat)
SAWS
(in Type)		 setGlobalVector()
(in DMShell)		 setUniformCoordinates()
(in DMDA)
SBAIJ
(in Type)		 setGMRESRestart()
(in KSP)		 setUp()
(in DM)
SBSTRM
(in Type)		 setGradient()
(in TAO)		 setUp()
(in KSP)
scale()
(in Mat)		 setGradientNorm()
(in TAO)		 setUp()
(in Mat)
scale()
(in Vec)		 setGraph()
(in SF)		 setUp()
(in PC)
SCATTER
(in Type)		 setHessian()
(in TAO)		 setUp()
(in Partitioner)
Scatter
(in petsc4py.PETSc)		 setHYPREDiscreteCurl()
(in PC)		 setUp()
(in SF)
scatter()
(in DMComposite)		 setHYPREDiscreteGradient()
(in PC)		 setUp()
(in SNES)
scatter()
(in Scatter)		 setHYPRESetAlphaPoissonMatrix()
(in PC)		 setUp()
(in Section)
SCATTER_FORWARD
(in ScatterMode)		 setHYPRESetBetaPoissonMatrix()
(in PC)		 setUp()
(in TAO)
SCATTER_FORWARD_LOCAL
(in ScatterMode)		 setHYPRESetEdgeConstantVectors()
(in PC)		 setUp()
(in TS)
SCATTER_LOCAL
(in ScatterMode)		 setHYPREType()
(in PC)		 setUp()
(in Vec)
SCATTER_REVERSE
(in ScatterMode)		 setIdentity()
(in IS)		 setUpdate()
(in SNES)
SCATTER_REVERSE_LOCAL
(in ScatterMode)		 setIFunction()
(in TS)		 setUpOnBlocks()
(in KSP)
scatterBegin()
(in Scatter)		 setIJacobian()
(in TS)		 setUpOnBlocks()
(in PC)
scatterEnd()
(in Scatter)		 setIndices()
(in IS)		 setUseAmat()
(in PC)
ScatterMode
(in petsc4py.PETSc)		 setInitial()
(in TAO)		 setUseEW()
(in SNES)
SCHUR
(in CompositeType)		 setInitialGuess()
(in SNES)		 setUseFD()
(in SNES)
SCHURCOMPLEMENT
(in Type)		 setInitialGuessKnoll()
(in KSP)		 setUseFischerGuess()
(in KSP)
SchurFactType
(in PC)		 setInitialGuessNonzero()
(in KSP)		 setUseMF()
(in SNES)
SchurPreType
(in PC)		 setInitialTimeStep()
(in TS)		 setValue()
(in Mat)
Section
(in petsc4py.PETSc)		 setInitialTrustRegionRadius()
(in TAO)		 setValue()
(in Options)
seed
(in Random)		 setInterpolationType()
(in DMDA)		 setValue()
(in Vec)
SELF
(in SchurPreType)		 setInterval()
(in Random)		 setValueBlockedStencil()
(in Mat)
SELFP
(in SchurPreType)		 setIterationNumber()
(in KSP)		 setValueLocal()
(in Mat)
SEQ
(in Type)		 setIterationNumber()
(in SNES)		 setValueLocal()
(in Vec)
SEQAIJ
(in Type)		 setJacobian()
(in SNES)		 setValues()
(in Mat)
SEQAIJCRL
(in Type)		 setJacobian()
(in TAO)		 setValues()
(in Vec)
SEQAIJCUSP
(in Type)		 setJacobianDesign()
(in TAO)		 setValuesBlocked()
(in Mat)
SEQAIJCUSPARSE
(in Type)		 setJacobianState()
(in TAO)		 setValuesBlocked()
(in Vec)
SEQAIJPERM
(in Type)		 setKSP()
(in SNES)		 setValuesBlockedCSR()
(in Mat)
SEQAIJVIENNACL
(in Type)		 setLabelOutput()
(in DM)		 setValuesBlockedIJV()
(in Mat)
SEQBAIJ
(in Type)		 setLabelValue()
(in DM)		 setValuesBlockedLocal()
(in Mat)
SEQBSTRM
(in Type)		 setLGMap()
(in Mat)		 setValuesBlockedLocal()
(in Vec)
SEQCUFFT
(in Type)		 setLGMap()
(in Vec)		 setValuesBlockedLocalCSR()
(in Mat)
SEQCUSP
(in Type)		 setLMVMH0()
(in TAO)		 setValuesBlockedLocalIJV()
(in Mat)
SEQDENSE
(in Type)		 setLocalToGlobal()
(in DMShell)		 setValuesBlockedLocalRCV()
(in Mat)
SEQMAIJ
(in Type)		 setLocalToGlobalVecScatter()
(in DMShell)		 setValuesBlockedRCV()
(in Mat)
SEQSBAIJ
(in Type)		 setLocalToLocal()
(in DMShell)		 setValuesCSR()
(in Mat)
SEQSBSTRM
(in Type)		 setLocalToLocalVecScatter()
(in DMShell)		 setValuesIJV()
(in Mat)
SEQVIENNACL
(in Type)		 setLocalVector()
(in DMShell)		 setValuesLocal()
(in Mat)
set()
(in Vec)		 setMatrix()
(in DMShell)		 setValuesLocal()
(in Vec)
setActive()
(in LogClass)		 setMatType()
(in DM)		 setValuesLocalCSR()
(in Mat)
setActive()
(in LogEvent)		 setMaxFunctionEvaluations()
(in SNES)		 setValuesLocalIJV()
(in Mat)
setActive()
(in LogStage)		 setMaxLinearSolveFailures()
(in SNES)		 setValuesLocalRCV()
(in Mat)
setActiveAll()
(in LogEvent)		 setMaxNonlinearStepFailures()
(in SNES)		 setValuesRCV()
(in Mat)
setAdjacencyUseClosure()
(in DMPlex)		 setMaxSNESFailures()
(in TS)		 setValueStencil()
(in Mat)
setAdjacencyUseCone()
(in DMPlex)		 setMaxStepRejections()
(in TS)		 setVariableBounds()
(in SNES)
setAlphaParams()
(in TS)		 setMaxSteps()
(in TS)		 setVariableBounds()
(in TAO)
setAlphaRadius()
(in TS)		 setMaxTime()
(in TS)		 setVecType()
(in DM)
setAppCtx()
(in DM)		 setMGCyclesOnLevel()
(in PC)		 setVisible()
(in LogStage)
setAppCtx()
(in KSP)		 setMGInterpolation()
(in PC)		 SF
(in petsc4py.PETSc)
setAppCtx()
(in SNES)		 setMGR()
(in PC)		 shape
(in _DMDA_Vec_array)
setAppCtx()
(in TAO)		 setMGRestriction()
(in PC)		 SHARED
(in Type)
setAppCtx()
(in TS)		 setMGRhs()
(in PC)		 SHELL
(in Type)
setArray()
(in Vec)		 setMGRScale()
(in PC)		 SHELL
(in Type)
setASMLocalSubdomains()
(in PC)		 setMGType()
(in PC)		 SHELL
(in Type)
setASMOverlap()
(in PC)		 setMGX()
(in PC)		 SHELL
(in PartitionerType)
setASMTotalSubdomains()
(in PC)		 setMonitor()
(in KSP)		 SHELL
(in Type)
setASMType()
(in PC)		 setMonitor()
(in SNES)		 shift()
(in Mat)
setAttr()
(in Object)		 setMonitor()
(in TAO)		 shift()
(in Vec)
setBlockIndices()
(in IS)		 setMonitor()
(in TS)		 Side
(in PC)
setBlockSize()
(in IS)		 setMPIGhost()
(in Vec)		 size
(in Comm)
setBlockSize()
(in Mat)		 setMumpsCntl()
(in Mat)		 size
(in IS)
setBlockSize()
(in Vec)		 setMumpsIcntl()
(in Mat)		 size
(in LGMap)
setBlockSizes()
(in Mat)		 setName()
(in Object)		 size
(in Mat)
setBoundaryType()
(in DMDA)		 setNearNullSpace()
(in Mat)		 size
(in Vec)
setChart()
(in DMPlex)		 setNestSubVecs()
(in Vec)		 Size
(in Viewer)
setChart()
(in Section)		 setNormSchedule()
(in SNES)		 sizes
(in DMDA)
setCoarsen()
(in DMShell)		 setNormType()
(in KSP)		 sizes
(in IS)
setCompositeType()
(in PC)		 setNPC()
(in SNES)		 sizes
(in Mat)
setComputeEigenvalues()
(in KSP)		 setNullSpace()
(in Mat)		 sizes
(in Vec)
setComputeOperators()
(in KSP)		 setNumFields()
(in Section)		 sizes
(in _DMDA_Vec_array)
setComputeRHS()
(in KSP)		 setObjective()
(in SNES)		 sleep()
(in Sys)
setComputeSingularValues()
(in KSP)		 setObjective()
(in TAO)		 SLICED
(in Type)
setCone()
(in DMPlex)		 setObjectiveGradient()
(in TAO)		 SNES
(in petsc4py.PETSc)
setConeOrientation()
(in DMPlex)		 setOffset()
(in Section)		 snes
(in TS)
setConeSize()
(in DMPlex)		 setOperators()
(in KSP)		 SOCKET
(in Type)
setConstraintDof()
(in Section)		 setOperators()
(in PC)		 solution
(in TAO)
setConstraintIndices()
(in Section)		 setOption()
(in Mat)		 solve()
(in KSP)
setConstraints()
(in TAO)		 setOption()
(in Vec)		 solve()
(in Mat)
setConstraintTolerances()
(in TAO)		 setOptionsPrefix()
(in DM)		 solve()
(in SNES)
setConvergedReason()
(in KSP)		 setOptionsPrefix()
(in KSP)		 solve()
(in TAO)
setConvergedReason()
(in SNES)		 setOptionsPrefix()
(in Mat)		 solve()
(in TS)
setConvergedReason()
(in TAO)		 setOptionsPrefix()
(in Object)		 solveAdd()
(in Mat)
setConvergedReason()
(in TS)		 setOptionsPrefix()
(in PC)		 solveBackward()
(in Mat)
setConvergenceHistory()
(in KSP)		 setOptionsPrefix()
(in SNES)		 solveForward()
(in Mat)
setConvergenceHistory()
(in SNES)		 setOptionsPrefix()
(in TAO)		 solveTranspose()
(in KSP)
setConvergenceTest()
(in KSP)		 setOptionsPrefix()
(in TS)		 solveTranspose()
(in Mat)
setConvergenceTest()
(in SNES)		 setOptionsPrefix()
(in Vec)		 solveTransposeAdd()
(in Mat)
setConvergenceTest()
(in TAO)		 setParamsEW()
(in SNES)		 SOR
(in Type)
setCoordinateName()
(in DMDA)		 setPC()
(in KSP)		 SOR()
(in Mat)
setCoordinates()
(in DM)		 setPCSide()
(in KSP)		 sort()
(in IS)
setCoordinates()
(in PC)		 setPermutation()
(in IS)		 sorted
(in IS)
setCoordinatesLocal()
(in DM)		 setPointSF()
(in DM)		 SORType
(in Mat)
setCreateFieldDecomposition()
(in DMShell)		 setPostStep()
(in TS)		 SPAI
(in Type)
setCreateGlobalVector()
(in DMShell)		 setPreallocationCSR()
(in Mat)		 SPD
(in Option)
setCreateInjection()
(in DMShell)		 setPreallocationDense()
(in Mat)		 SPECIAL
(in CompositeType)
setCreateInterpolation()
(in DMShell)		 setPreallocationNNZ()
(in Mat)		 SPECTRAL
(in OrderingType)
setCreateLocalVector()
(in DMShell)		 setPreStep()
(in TS)		 splitOwnership()
(in Sys)
setCreateMatrix()
(in DMShell)		 setProblemType()
(in TS)		 SPRNG
(in Type)
setCreateSubDM()
(in DMShell)		 setProcSizes()
(in DMDA)		 sqrtabs()
(in Vec)
setDefaultComm()
(in Sys)		 setPythonContext()
(in KSP)		 SSFLS
(in Type)
setDefaultGlobalSection()
(in DM)		 setPythonContext()
(in Mat)		 SSILS
(in Type)
setDefaultSection()
(in DM)		 setPythonContext()
(in PC)		 SSP
(in Type)
setDiagonal()
(in Mat)		 setPythonContext()
(in SNES)		 Stage()
(in Log)
setDim()
(in DMDA)		 setPythonContext()
(in TS)		 STANDARD
(in Type)
setDimension()
(in DM)		 setPythonType()
(in KSP)		 STAR
(in StencilType)
setDM()
(in KSP)		 setPythonType()
(in Mat)		 starts
(in _DMDA_Vec_array)
setDM()
(in PC)		 setPythonType()
(in PC)		 stateIncrease()
(in Object)
setDM()
(in SNES)		 setPythonType()
(in SNES)		 STCG
(in Type)
setDM()
(in TS)		 setPythonType()
(in TS)		 STDERR()
(in Viewer)
setDMActive()
(in KSP)		 setRandom()
(in Vec)		 STDOUT()
(in Viewer)
setDof()
(in DMDA)		 setRankOrder()
(in SF)		 stencil
(in DMDA)
setDof()
(in Section)		 setRefine()
(in DMShell)		 stencil_type
(in DMDA)
setDrawInfo()
(in Viewer)		 setRefinementFactor()
(in DMDA)		 stencil_width
(in DMDA)
setDuration()
(in TS)		 setRefinementLimit()
(in DMPlex)		 StencilType
(in DMDA)
setElementType()
(in DMDA)		 setRefinementUniform()
(in DMPlex)		 step()
(in TS)
setEquationType()
(in TS)		 setResetCounters()
(in SNES)		 step_number
(in TS)
setErrorIfStepFails()
(in TS)		 setResidualNorm()
(in KSP)		 STEPOVER
(in ExactFinalTime)
setExactFinalTime()
(in TS)		 setReusePreconditioner()
(in PC)		 stol
(in SNES)
setFactorLevels()
(in PC)		 setRHSFunction()
(in TS)		 storeValues()
(in Mat)
setFactorOrdering()
(in PC)		 setRHSJacobian()
(in TS)		 stratify()
(in DMPlex)
setFactorPivot()
(in PC)		 setSeed()
(in Random)		 STRIDE
(in Type)
setFactorShift()
(in PC)		 setSeparableObjective()
(in TAO)		 strideGather()
(in Vec)
setFactorSolverPackage()
(in PC)		 setShellPartition()
(in Partitioner)		 strideMax()
(in Vec)
setFASInjection()
(in SNES)		 setSizes()
(in DMDA)		 strideMin()
(in Vec)
setFASInterpolation()
(in SNES)		 setSizes()
(in Mat)		 strideNorm()
(in Vec)
setFASLevels()
(in SNES)		 setSizes()
(in Vec)		 strides
(in _DMDA_Vec_array)
setFASRestriction()
(in SNES)		 setSolution()
(in SNES)		 strideScale()
(in Vec)
setFASRScale()
(in SNES)		 setSolution()
(in TS)		 strideScatter()
(in Vec)
setFieldComponents()
(in Section)		 setStateDesignIS()
(in TAO)		 strideSum()
(in Vec)
setFieldConstraintDof()
(in Section)		 setStencil()
(in DMDA)		 STRING
(in Type)
setFieldConstraintIndices()
(in Section)		 setStencil()
(in Mat)		 structsymm
(in Mat)
setFieldDof()
(in Section)		 setStencilType()
(in DMDA)		 STRUCTURALLY_SYMMETRIC
(in Option)
setFieldName()
(in DMDA)		 setStencilWidth()
(in DMDA)		 Structure
(in Mat)
setFieldName()
(in Section)		 setStepNumber()
(in TS)		 SUBMATRIX
(in Type)
setFieldSplitFields()
(in PC)		 setStride()
(in IS)		 SUBSET
(in Structure)
setFieldSplitIS()
(in PC)		 setSupport()
(in DMPlex)		 SUBSET_NONZERO_PATTERN
(in Structure)
setFieldSplitSchurFactType()
(in PC)		 setSupportSize()
(in DMPlex)		 SUBSET_NZ
(in Structure)
setFieldSplitSchurPreType()
(in PC)		 setTabLevel()
(in Object)		 SUBSET_OFF_PROC_ENTRIES
(in Option)
setFieldSplitType()
(in PC)		 setTetGenOptions()
(in DMPlex)		 sum()
(in IS)
setFileMode()
(in Viewer)		 setTheta()
(in TS)		 sum()
(in Vec)
setFileName()
(in Viewer)		 setThetaEndpoint()
(in TS)		 SUNDIALS
(in Type)
setFromOptions()
(in DM)		 setTime()
(in TS)		 SVD
(in Type)
setFromOptions()
(in KSP)		 setTimeStep()
(in TS)		 swap()
(in Vec)
setFromOptions()
(in Mat)		 setTimestep()
(in ViewerHDF5)		 SYMMETRIC
(in Option)
setFromOptions()
(in Object)		 setTolerances()
(in KSP)		 symmetric
(in Mat)
setFromOptions()
(in Options)		 setTolerances()
(in SNES)		 SYMMETRIC
(in Side)
setFromOptions()
(in PC)		 setTolerances()
(in TAO)		 SYMMETRIC_MULTIPLICATIVE
(in CompositeType)
setFromOptions()
(in Partitioner)		 setTolerances()
(in TS)		 symmetrize()
(in DMPlex)
setFromOptions()
(in Random)		 setTriangleOptions()
(in DMPlex)		 SYMMETRY_ETERNAL
(in Option)
setFromOptions()
(in SF)		 setType()
(in DM)		 SYMMETRY_SWEEP
(in SORType)
setFromOptions()
(in SNES)		 setType()
(in IS)		 SYMMLQ
(in Type)
setFromOptions()
(in TAO)		 setType()
(in KSP)		 syncFlush()
(in Sys)
setFromOptions()
(in TS)		 setType()
(in Mat)		 syncPrint()
(in Sys)
setFromOptions()
(in Vec)		 setType()
(in PC)		 Sys
(in petsc4py.PETSc)
setFunction()
(in NullSpace)		 setType()
(in Partitioner)		 SYSPFMG
(in Type)
setFunction()
(in SNES)		 setType()
(in Random)		  

T
TAO
(in petsc4py.PETSc)		 time
(in TS)		 Type
(in DM)
TCQMR
(in Type)		 time_step
(in TS)		 Type
(in IS)
tDot()
(in Vec)		 toAll()
(in Scatter)		 Type
(in KSP)
tDotBegin()
(in Vec)		 toGeneral()
(in IS)		 Type
(in Mat)
tDotEnd()
(in Vec)		 tompi4py()
(in Comm)		 type
(in Object)
TELESCOPE
(in Type)		 toZero()
(in Scatter)		 Type
(in PC)
TEST
(in Type)		 transpose()
(in Mat)		 Type
(in Random)
TEST
(in Type)		 TRANSPOSEMAT
(in Type)		 Type
(in SF)
TFQMR
(in Type)		 transposeMatMult()
(in Mat)		 Type
(in SNES)
TFS
(in Type)		 TRON
(in Type)		 Type
(in TAO)
TH
(in Type)		 TS
(in petsc4py.PETSc)		 Type
(in TS)
THETA
(in Type)		 TSIRM
(in Type)		 Type
(in Vec)
THIRD
(in Size)		 TWIST
(in BoundaryType)		 Type
(in Viewer)
THIRD_SIZE
(in Size)		 Type
(in AO)		  

U
U
(in Mode)		 UNSPECIFIED
(in ExactFinalTime)		 use_fd
(in SNES)
UA
(in Mode)		 UNUSED_NONZERO_LOCATION_ERR
(in Option)		 USE_HASH_TABLE
(in Option)
union()
(in IS)		 UPDATE
(in Mode)		 USE_INODES
(in Option)
UNPRECONDITIONED
(in NormType)		 UPPER
(in SchurFactType)		 use_mf
(in SNES)
UNSPECIFIED
(in EquationType)		 use_ew
(in SNES)		 USER
(in SchurPreType)

V
Vec
(in petsc4py.PETSc)		 view()
(in Log)		 view()
(in Vec)
vec_rhs
(in KSP)		 view()
(in Mat)		 view()
(in Viewer)
vec_rhs
(in SNES)		 view()
(in NullSpace)		 Viewer
(in petsc4py.PETSc)
vec_sol
(in KSP)		 view()
(in Object)		 ViewerHDF5
(in petsc4py.PETSc)
vec_sol
(in SNES)		 view()
(in Options)		 VINEWTONRSLS
(in Type)
vec_sol
(in TS)		 view()
(in PC)		 VINEWTONSSLS
(in Type)
vec_upd
(in SNES)		 view()
(in Partitioner)		 visible
(in LogStage)
vecGetClosure()
(in DMPlex)		 view()
(in Random)		 VTK
(in Type)
VIENNACL
(in Type)		 view()
(in SF)		 VTK_VTR
(in Format)
view()
(in AO)		 view()
(in SNES)		 VTK_VTS
(in Format)
view()
(in DM)		 view()
(in Scatter)		 VTK_VTU
(in Format)
view()
(in IS)		 view()
(in Section)		 VU
(in Type)
view()
(in KSP)		 view()
(in TAO)		  
view()
(in LGMap)		 view()
(in TS)		  

W
W
(in Mode)		 WBM
(in OrderingType)		 WRITE
(in Mode)
waxpy()
(in Vec)		 WINDOW
(in Type)		  

Z
ZERO_INITIAL_GUESS
(in SORType)		 zeroEntries()
(in Vec)		 zeroRowsColumns()
(in Mat)
zeroEntries()
(in Mat)		 zeroRows()
(in Mat)		 zeroRowsLocal()
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_
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(in Vec)
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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:46 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc._Vec_LocalForm-class.html0000644000175000001440000002577612711405160025567 0ustar dalcinlusers00000000000000 petsc4py.PETSc._Vec_LocalForm
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PETSc for Python
Package petsc4py :: Module PETSc :: Class _Vec_LocalForm
[hide private]
[frames] | no frames]

Class _Vec_LocalForm

_Vec_LocalForm(Vec gvec) Context manager for Vec local form
Instance Methods [hide private]
 
__enter__(self)
 
__exit__(self, *exc)
 
__init__(Vec gvec)
x.__init__(...) initializes x; see help(type(x)) for signature
a new object with type S, a subtype of T
__new__(S, ...)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(Vec gvec)
(Constructor)

 
x.__init__(...) initializes x; see help(type(x)) for signature
Overrides: object.__init__

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:52 2016 http://epydoc.sourceforge.net
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PETSc for Python
Package petsc4py :: Module PETSc :: Class TS
[hide private]
[frames] | no frames]

Class TS

Nested Classes [hide private]
  ConvergedReason
  EquationType
  ExactFinalTime
  ExactFinalTimeOption
  ProblemType
  Type
Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
cancelMonitor(self)
 
clone(self)
 
computeIFunction(self, t, Vec x, Vec xdot, Vec f, imex=False)
 
computeIJacobian(self, t, Vec x, Vec xdot, a, Mat J, Mat P=None, imex=False)
 
computeRHSFunction(self, t, Vec x, Vec f)
 
computeRHSFunctionLinear(self, t, Vec x, Vec f)
 
computeRHSJacobian(self, t, Vec x, Mat J, Mat P=None)
 
computeRHSJacobianConstant(self, t, Vec x, Mat J, Mat P=None)
 
create(self, comm=None)
 
createPython(self, context=None, comm=None)
 
destroy(self)
 
getAlphaParams(self)
 
getAppCtx(self)
 
getConvergedReason(self)
 
getDM(self)
 
getDuration(self)
 
getEquationType(self)
 
getIFunction(self)
 
getIJacobian(self)
 
getKSP(self)
 
getKSPIterations(self)
 
getMaxSteps(self)
 
getMaxTime(self)
 
getMonitor(self)
 
getOptionsPrefix(self)
 
getPostStep(self)
 
getPreStep(self)
 
getPrevTime(self)
 
getProblemType(self)
 
getPythonContext(self)
 
getRHSFunction(self)
 
getRHSJacobian(self)
 
getSNES(self)
 
getSNESFailures(self)
 
getSNESIterations(self)
 
getSolution(self)
 
getSolveTime(self)
 
getStepNumber(self)
 
getStepRejections(self)
 
getTheta(self)
 
getThetaEndpoint(self)
 
getTime(self)
 
getTimeStep(self)
 
getTolerances(self)
 
getTotalSteps(self)
 
getType(self)
 
interpolate(self, t, Vec u)
 
load(self, Viewer viewer)
 
monitor(self, step, time, Vec u=None)
 
reset(self)
 
rollBack(self)
 
setAlphaParams(self, alpha_m=None, alpha_f=None, gamma=None)
 
setAlphaRadius(self, radius)
 
setAppCtx(self, appctx)
 
setConvergedReason(self, reason)
 
setDM(self, DM dm)
 
setDuration(self, max_time, max_steps=None)
 
setEquationType(self, eqtype)
 
setErrorIfStepFails(self, flag=True)
 
setExactFinalTime(self, option)
 
setFromOptions(self)
 
setIFunction(self, function, Vec f=None, args=None, kargs=None)
 
setIJacobian(self, jacobian, Mat J=None, Mat P=None, args=None, kargs=None)
 
setInitialTimeStep(self, initial_time, initial_time_step)
 
setMaxSNESFailures(self, n)
 
setMaxStepRejections(self, n)
 
setMaxSteps(self, max_steps)
 
setMaxTime(self, max_time)
 
setMonitor(self, monitor, args=None, kargs=None)
 
setOptionsPrefix(self, prefix)
 
setPostStep(self, poststep, args=None, kargs=None)
 
setPreStep(self, prestep, args=None, kargs=None)
 
setProblemType(self, ptype)
 
setPythonContext(self, context)
 
setPythonType(self, py_type)
 
setRHSFunction(self, function, Vec f=None, args=None, kargs=None)
 
setRHSJacobian(self, jacobian, Mat J=None, Mat P=None, args=None, kargs=None)
 
setSolution(self, Vec u)
 
setStepNumber(self, step_number)
 
setTheta(self, theta)
 
setThetaEndpoint(self, flag=True)
 
setTime(self, t)
 
setTimeStep(self, time_step)
 
setTolerances(self, rtol=None, atol=None)
 
setType(self, ts_type)
 
setUp(self)
 
solve(self, Vec u)
 
step(self)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  appctx
  atol
  converged
  diverged
  dm
  equation_type
  iterating
  ksp
  max_steps
  max_time
  problem_type
  reason
  rtol
  snes
  step_number
  time
  time_step
  vec_sol

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getOptionsPrefix(self)

 
Overrides: Object.getOptionsPrefix

getType(self)

 
Overrides: Object.getType

setFromOptions(self)

 
Overrides: Object.setFromOptions

setOptionsPrefix(self, prefix)

 
Overrides: Object.setOptionsPrefix

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:51 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Mat.OrderingType-class.html0000644000175000001440000002616112711405154026100 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Mat.OrderingType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Mat :: Class OrderingType
[hide private]
[frames] | no frames]

Class OrderingType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  AMD = 'amd'
  NATURAL = 'natural'
  ND = 'nd'
  OWD = '1wd'
  QMD = 'qmd'
  RCM = 'rcm'
  ROWLENGTH = 'rowlength'
  SPECTRAL = 'spectral'
  WBM = 'wbm'
  __qualname__ = 'MatOrderingType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Vec :: Class Option
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Class Option

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  IGNORE_NEGATIVE_INDICES = 1
  IGNORE_OFF_PROC_ENTRIES = 0
  __qualname__ = 'VecOption'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:51 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/epydoc.js0000644000175000001440000002452512711405152020106 0ustar dalcinlusers00000000000000function toggle_private() { // Search for any private/public links on this page. Store // their old text in "cmd," so we will know what action to // take; and change their text to the opposite action. var cmd = "?"; var elts = document.getElementsByTagName("a"); for(var i=0; i...
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PETSc for Python
Package petsc4py :: Module PETSc :: Class _IS_buffer
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Class _IS_buffer

Instance Methods [hide private]
 
__enter__(self)
 
__exit__(self, *exc)
a new object with type S, a subtype of T
__new__(S, ...)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  __array_interface__

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:52 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.lib-module.html0000644000175000001440000002415012711405152022750 0ustar dalcinlusers00000000000000 petsc4py.lib
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PETSc for Python
Package petsc4py :: Package lib
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Package lib

Extension modules for different PETSc configurations.

PETSc can be configured with different options (eg. debug/optimized, single/double precisionm, C/C++ compilers, external packages). Each configuration variant is associated to a name, frequently available as an environmental variable named PETSC_ARCH.

This package is a holds all the available variants of the PETSc extension module built agaist specific PETSc configurations. It also provides a convenience function using of the builtin imp module for easily importing any of the available extension modules depending on the value of a user-provided configuration name, the PETSC_ARCH environmental variable, or a configuration file.

Functions [hide private]
 
ImportPETSc(arch=None)
Import the PETSc extension module for a given configuration name.
 
getPathArchPETSc(arch=None)
Undocumented.
 
Import(pkg, name, path, arch)
Import helper for PETSc-based extension modules.
 
getPathArch(path, arch, rcvar='PETSC_ARCH', rcfile='petsc.cfg')
Undocumented.
 
getInitArgs(args)
Undocumented.
Variables [hide private]
  __package__ = 'petsc4py.lib'
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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:46 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for__mat_stenc.png0000644000175000001440000000261212711405160025170 0ustar dalcinlusers00000000000000PNG  IHDRm$ #bKGD?IDATh{LSWՁ<d؄j f2 *8Bc>G!@R&|VE>Ъ@e2UwyW[l*=Xs~o~b8w(@܂ 6`3zҺW|Ѩ "s0ἧ022B]l͙9tQѻkQVK$VA@G4 rY VLXqmc5ۋ.04+e29+c\ec vv6ݞ;wi_»V[uuE^yF"9A FֺuN1:,R&jj"g϶3ߌ<ٞ'Gde]udnJbbW}F^M^D>х@تUh„2,"$DW]mvhxX"y-X05*J" 垸|t锈#G`xd$W.?uNΟ\9qk$J`ET1?0fT{mӠP ;' !&N$6u]],`i17wOаeQɔ)YSe8B*b;wũălUpj{'Vo^|==vvmGѺ:kgAASL!/^ Lr9 CujWNj23/=i{q8rK>_ZRjniKMQmm6^z<3ɱ<,j`222VfgXdr0.5uo8gYTܹB(.- JL\)Fb;O$Z2+0pOzjsnvO֭6 x,P{PV'K$T* uF߯_Ȋkdo[xuPuG4P> gꛛm #F3z}^;w)c DuA#(7r8jIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_log.png0000644000175000001440000000127312711405154023642 0ustar dalcinlusers00000000000000PNG  IHDR5$bKGDpIDATXc? L`}H 99q`ݣ P4(sڵp' KAVBBWzK dTg~ջw/-E2@ <~Lu`1 ?'֊˸3V 䳶vJMrb)9/޾=tߣ*+yZfϞ`u̖2~bǎW+0004eesw[Y1007eeEUV^}?eWEVɫW :p5ZHluҟ03ӽO!ܻOHKI]{{dLf~Ε ww]W)SD&L0ҺxfÌd4tU\2 S*+LXY#<<*XY{K}Fz ||PsCMM !ܵ{Hj KnTU~ۏ'.]:5%(TCVao?~~^IZ:) =$TCh>f斜J 1/(XK0QtO^Dqӿx z `ffFpE`} 5z7IENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Object-class.html0000644000175000001440000007525412711405155024163 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Object
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Object
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Class Object

Instance Methods [hide private]
 
__copy__(self)
 
__deepcopy__(self, dict memo)
 
__eq__(y)
x==y
 
__ge__(y)
x>=y
 
__gt__(y)
x>y
 
__le__(y)
x<=y
 
__lt__(y)
x<y
 
__ne__(y)
x!=y
a new object with type S, a subtype of T
__new__(S, ...)
 
__nonzero__()
x != 0
 
compose(self, name, Object obj)
 
decRef(self)
 
destroy(self)
 
getAttr(self, name)
 
getClassId(self)
 
getClassName(self)
 
getComm(self)
 
getDict(self)
 
getName(self)
 
getOptionsPrefix(self)
 
getRefCount(self)
 
getTabLevel(self)
 
getType(self)
 
incRef(self)
 
incrementTabLevel(self, tab, Object parent=None)
 
query(self, name)
 
setAttr(self, name, attr)
 
setFromOptions(self)
 
setName(self, name)
 
setOptionsPrefix(self, prefix)
 
setTabLevel(self, level)
 
stateIncrease(self)
 
view(self, Viewer viewer=None)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  classid
  comm
  fortran
  handle
  klass
  name
  prefix
  refcount
  type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
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petsc4py-3.7.0/docs/apiref/petsc4py.PETSc._Vec_buffer-class.html0000644000175000001440000002357412711405160025154 0ustar dalcinlusers00000000000000 petsc4py.PETSc._Vec_buffer
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PETSc for Python
Package petsc4py :: Module PETSc :: Class _Vec_buffer
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Class _Vec_buffer

Instance Methods [hide private]
 
__enter__(self)
 
__exit__(self, *exc)
a new object with type S, a subtype of T
__new__(S, ...)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  __array_interface__

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:52 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Log-class.html0000644000175000001440000003533512711405154023471 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Log
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Log
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Class Log

Instance Methods [hide private]
 
Class(type cls, name)
 
Event(type cls, name, klass=None)
 
Stage(type cls, name)
a new object with type S, a subtype of T
__new__(S, ...)
 
addFlops(type cls, flops)
 
begin(type cls, all=False)
 
destroy(type cls)
 
getCPUTime(type cls)
 
getFlops(type cls)
 
getTime(type cls)
 
logFlops(type cls, flops)
 
view(type cls, Viewer viewer=None)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_logevent.png0000644000175000001440000000225212711405154024702 0ustar dalcinlusers00000000000000PNG  IHDRX$jbKGD_IDAThc?(```h 0P00 $''322Έ\X233oGO_8% AVBBWwF/p/^000 Sʮ. `рр,eAh`p{fYYd40yQ c)JIQ{OEG9x<""5o?~$[;ʈ?'֊˸3V 䳶vJMrLE==_mm>ϟ~q''1G0000,ݶM30Pήk ggOioթKOر_2{vi齭[RR ኿~7dvH#gc\VV K̲e{gwTݴiC6|Ѣ }xb{~?V1LIFFWU)+k֭-*,tp17oʂ7 㵲BF o?~xʕϞI@R ,uLffb'OXYX޽Qs=DzzwukiAEϙ ?x"DFf~ś7py+wL^6a®~ԩ3}|4pYZ~]AΕ&=|ҭ[YYSa)+7d2SU\2 S*+LXY#<<*XY{K}F` *6VPWe۷ 兖.p&F`΂NR14tq|> ssJsˡCvϞٳOUv1vi׸tVLUչ׿qҥکSShg-˲o?~~^IZ:) =$vQh,-99-99`P0:"%&&)D0ZXBh@@h@@=ڔDIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_object.png0000644000175000001440000007166612711405155024345 0ustar dalcinlusers00000000000000PNG  IHDRaQ_bKGD IDATxw|SdIޖ%#y ޱd@LB(MӐ|҄Ќ&mCڒФMi@LB$`Oy`[-ɲw?ZKüqu%]s:2AAAApvAAAAJ    Ƚ*A    ! 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PETSc for Python
 
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Module Hierarchy

  • petsc4py: This package is an interface to PETSc libraries.
    • petsc4py.PETSc: Portable, Extensible Toolkit for Scientific Computation
    • petsc4py.lib: Extension modules for different PETSc configurations.
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PETSc for Python
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petsc4py-3.7.0/docs/apiref/class_hierarchy_for_normschedu.png0000644000175000001440000000330512711405156025230 0ustar dalcinlusers00000000000000PNG  IHDRw$#bKGDzIDATxP?wzji<fz阢$j \$5QjШ!BP\C:ȈĠX@4V1ɨ$W@DKGdUr}>~w}weÁ;R.H<8$s\wыիW;d2ڏ) GEEEo++yR|p1׃^v&3*Un!FyU~5meFJBdju}#H1+SYHLkc} bo!!3P~:kʰ06ݻ^Vcmly x֘WUU;&ܠ]ZSgdJ%dz$ D3ŋ6hmkKrˌ|Fٙ3ڰC'N<\<5y2MMu)=|uolڄsLBf&޽+sh8}2]h>s璶k?4ffSn3q믅س3gbyyi4̝r,Sl]]$L?h2Eζ"2^s/~?}1aÆT)X\'`M\9Czaпm|geau5ٶn[?@0s>/@pTۋ;JJ_]͑lj f܎>ͅ{1''nvm*)fZZJM~>ϟ;wUZ"u::{kְaǎA[b ӲϏ8ilmuboe%LJ羾JR֮aN6$Q#G[ OaaS`+̙>4 1"'^zңG( 5:R/L0%v/a < ~=ovƏGTQYWǟ1dzh|&t ŠKLD-B_nm󄯯2iM7o O;iM;}.wt`9y%RRq6d2 '||˝/n bwBaԩ}O_ DϕP@B|ܘ1 Y3 M(z=_b2@ōBի.eY&uGC<,l--\v ڵ䖕d &Oʺ:^ @vJK/Zjjb9z=qF#\ÇѠ_ʩ4[5?wn1n!!$GE_B~B0H{kt4qF#ӵZ2-X@NOFN22hikcRI3x{y5&o6~=ǏJ_ d)OW=X9_rd#H1nd#;q%f."b\.neGbQW\$DPj].ӏn4H1n8µ7IENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_normtype.png0000644000175000001440000000250312711405153024732 0ustar dalcinlusers00000000000000PNG  IHDR]$d>bKGDIDAThc?(LA F; ?HNNfddh PSS{<(P…iD'kƒY߿ O^<~߿,,Vvu] V}MpDg<`4\p FRĝǏ ;v0` 7oR|"rf;wFxxP5 a``U\ , @u2%=$$DBDdgdgg``;'Yh((57cv?|P[+bo/VOH.{򤜇Ǒ mؠ(1o-[kNcc^ggrC7.s7n@Lxc^g_~S/$XR=Hf033/hns͛Ѥr۟zujS=lY:U7m$>R|\?+vXV$#ڔdVTWAA;CAt4/7w/Cql,/7w?OpYgmhzYe۶r=EErr溺o8BVBBWU`ѣz:'"PC#^}?eWEVɫW"\+ `fb rrZw<RZg..5=ӧzr75醄Z"".,tS-%%OHA usRV14~HWUÇR "Qe``7oHnU)*]eea ww;wjLAX џfΌAW&Of``rv4nʚr%vQbnN5rpLJ `fb rvK3xKZWv5ĺl^..pT}5΂RbDh!%Y۠OWOӥǏU}}_@w+-e``XjUhh(Dp~yɓy6!.'\1J p01 qs:J{cw ͨuC& v0.h`X.acKLApabb/#033#86ˈ96 F]\`4\p@ IENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.PC.ASMType-class.html0000644000175000001440000002140512711405155024525 0ustar dalcinlusers00000000000000 petsc4py.PETSc.PC.ASMType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class PC :: Class ASMType
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Class ASMType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  BASIC = 3
  INTERPOLATE = 2
  NONE = 0
  RESTRICT = 1
  __qualname__ = 'PCASMType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:49 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_nullspace.png0000644000175000001440000000511512711405155025047 0ustar dalcinlusers00000000000000PNG  IHDR][(bKGD IDATx{LTWVp H%H ҆F+(X8Z`_*ch\t]JJC+TmGme&H+jʀz-|2㜢Knr|39{8s4BCq*]t t5@QQW\G.ggg޽{ǃҥ-++&g6w/ Of[Pt %J*]R[Vz=CgϞ⋬_^e6h4wh0͎J8\y8y$III>}X8@DDnݺotZmspo+6=, hZqvv`;@ȑ#c޼y6pm^jS [p7=##xEx ...z222s`hZϟO}}=к{ijjBӷo_<<<455իF2k,jkkx饗tDP鵵\r;^槟~RCnn.999瓘خNJJ /^ԩSSPP@||<[n%++ )++cݺu}h`0bܹj7ne˖ ///ѫW/1}tQSS#I1B:bTNIt-=^F#]vITϞ=KDDs̡0ea3J*]t e`˂:٨l KGGGdLs~F`0-;F%J*]t %J*]t %J*]t %J*]t %J*]t %J*]t %nZ]UU'N3L*..% DHHHm'7I8mNNN~h]r;~b*ۭ~ g̙<Ǖkwӓ,'Et %``htʵSW_ϲ-[0|'Nduz:7푺Mg^/W86n$kf.9VX>%rv),ܰ+j ~0{jh(+VzGb7Kz!071CmzŽLrP,;~_c(>LJM>;qiFp6@[NO;2ȑZו{457OIk1jl\»Iwvv|Y\̾l{ >wg#"3orv |Fvj*5daٴt)T԰5#/$'-](XXk/%#©߹#~ɮO/l\EIIT鷥#BB8s0_+Æ/;s[۴t)ބn8Isw߾VWǮGI\ __ boB/{>x1|c6}7H~>s֬a[l]=(쯾b1Īcuz:SRxs8?d~[׮Y,@]}=!C(e,_L6ruoݟӝ؛7F#;]o}i_KOF/it钲_fH~bG\RKex| Sv6hDQ|呼<,.e'(zlYIG2",``=n9LH~>ykژt7~nt-(okְvN0Y,ӇicqgDE>w.ֆGt)6ẗ駉=`rs640v| D K(.\ȢdBMIarx8IMZ=f dQbwDU8G^@ff&SNUc/SN=yZ%;K%J*]m'mljA?h0O;\h3.ؙQJ@..aI petsc4py.PETSc.PC.MGType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class PC :: Class MGType
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Class MGType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  ADDITIVE = 1
  FULL = 2
  KASKADE = 3
  MULTIPLICATIVE = 0
  __qualname__ = 'PCMGType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:49 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Mat.AssemblyType-class.html0000644000175000001440000002152512711405154026105 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Mat.AssemblyType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Mat :: Class AssemblyType
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Class AssemblyType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  FINAL = 0
  FINAL_ASSEMBLY = 0
  FLUSH = 1
  FLUSH_ASSEMBLY = 1
  __qualname__ = 'MatAssemblyType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Mat.SORType-class.html0000644000175000001440000002474212711405154024775 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Mat.SORType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Mat :: Class SORType
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Class SORType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  APPLY_LOWER = 128
  APPLY_UPPER = 64
  BACKWARD_SWEEP = 2
  EISENSTAT = 32
  FORWARD_SWEEP = 1
  LOCAL_BACKWARD_SWEEP = 8
  LOCAL_FORWARD_SWEEP = 4
  LOCAL_SYMMETRIC_SWEEP = 12
  SYMMETRY_SWEEP = 3
  ZERO_INITIAL_GUESS = 16
  __qualname__ = 'MatSORType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_dmshell.png0000644000175000001440000000574312711405153024516 0ustar dalcinlusers00000000000000PNG  IHDRSbKGD IDATx}Pǿ+4ӕ"‚ |K "|kzF)]%RpUf1] )Mi!ӆEeq xs]vE~ 3{9s18fLw\&!\&!fǷ~aKcUHR3"ښ1Ɣf7󡡡QP>...\.ǓO>Yfa…ν "hE",& ݍ ̙3F]]222(Ysrr H9K.鞏fߴ ۷oD"AEElll=bbb\<3w,#--mR1ܼy׮]Tb33//Q ˑ'*6Arr¶m裏B" %%ׯ_,YhXLLfrL&ï*PVVRTTT`ǎF( \|gϞEEE*++O>EEE(--؈PSShkk@-`XM ; 09991FaRd^^^10Fcg:NW^^d2e_~yhee)-gΞ=RjFj5>>>k___t:cjfooGQ a>^ۍڽF\\h׍;wQyNNNh4YףnnnhnnjO%vDDD Xx1*MOOGSSΜ9[⥗^2*/66jhhhe˰w^$''ƹsp9lܸZ؞KVu !1zzzXzz: `3gdlΝ1>yzz2gggc}fWW{嗙sttd֭cm޼1{{{vZc &'9Yn9܋LjC=4͑_TxxxLw8fadGGGt1!̼2 2 2 2 1jnk;Nbx͸b Mj( ()\`_(-Fll,ф)LBLBLBLBLBLBLBLBLBLBLBLBLBLBLBLBLBLBLBLBLBLBLBLBLBLBHaT*T*"o ++ de* ՔEんe? SOMˌb$$$$deD")))FOD"3ogVdϴӧOCʕ+EWWEKFinnF}}A^GUUT;.V!S"@*bΜ9Gqq1͛Ba/22hPpMeb2"R(J~!Ou&J(/^4H FOO;;;QYYիWOGFXLS ..Na=zpttFZF PT`YUT&c 999XrѾtwwԩS(//ǚ5k!BXJFSSLYIIQѦ~z,Zi\t)\]]dbdD\p8`g򅅅gn9*......̖ 2ݡRg_X[[['Y(J$%%Y._$$$$$$$$$$$$$$$$$$$$$$$$$hÇqAV521{b1lxJ~q&FGp.t?"/@pppdHytF|V2Ά dhu_ׇͻwk ibZm990(o44_S@/oDV#C=kU76B+黺PUWgP?ZE .]og'lB6)d\8;#|B+E^A%K*/7H;r,0H;|8^~~88 |[8T!c>S$!->'O'DEA锗#~>:;-+3wY :p@H\˳9<rCCU4¢ sqqL, 76:{zPY[Pw*`(՜?nT*lMMśc4sH3fVUFF wQrk+eLrT* 52>p꧟P^S#U i"1Kbh̏ՏܭД`j5'O/ j6>d2;z;Zq} \nm?̘߱#3g"(=y\zl޽k-3+؈d|):װAv4%Ex!@<{dĘS*qZvߏ{@I11x7-ͬxvn؀څII!!.2ٛ6u9)1zuL3:bJLLDD$$$$$d̖68wf\ ˧2f{71hގ*kd!:: [eG$%\&!qqAIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_insertmode.png0000644000175000001440000000245512711405153025234 0ustar dalcinlusers00000000000000PNG  IHDRa$+bKGDIDAThLSWO2%2Lu,eq@ ZR`5CJHIJ&VP 0$ 32 2CDE„K(?l[m-l t}s9w^-`07;FYtm>L&SVcLV/hiid tMmQMM*f7m\^D\/‡B#|F$kTy*&!<9iHd}Qb${yTƖ##X|{h 3ssƖfDٳywH,V}GG`r}EWƟzz|PjQ~eE"mdމgx`+ccr*F-,|/)siiA.{F>A T,Cł8g''e)! h`<\]!ߞ8`̬~梜m lvav6l)b^|blQTV_A``nZ~6''3xovK+Μ:+\~86O̬"??@4kN'DZ 429 떖i..^egk wWWO77EeeӨ?&9쐐!ݻyy}L~<1?RzѣKptmX\\Hc*].N{O gf76]j2yAA]݁JeKcGGO}Kd[ӝ}}wǚkc{iꂂov;[QPXzH{Y.u>H$Q!B#|!4‡B#|y9x8n5A55en|I#2 RVBPwe Ch_4aGIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_compositet.png0000644000175000001440000000320712711405155025247 0ustar dalcinlusers00000000000000PNG  IHDR}$+cMbKGD=NӒ +kk iD[ItvpJH_ZY 9~96[T?4<<~4p&Һ(LBh{QdmױcB!co]VuIyyx|7#L. ||L#Y,ĄR// +VXyzUVufնm+D$3SRL]\L))"XEX(qʿWjeÂ/[Z&$k?q+[줨?9#11NEEii盛z=6Fg2WWLJ%$qf ϿYPPwT}konj[KbP`E&/ZH*AezE8"Vd́0vU|)_WGoo::>>^XX;[jB$ hdtlj 䔗ƚHv66+WtPp8\[/JJPw==SCe7::~ Ypsss^_p)l,,`%On)=KYY%h۷)=~lMh#>_QO-,vٺ=<RY߿R͕}QOO"`jhvOJde>} O-5&BTr@ccwdH_aEMZ^4ڹP(dSSET-u|?q̀={ZiDjAN[oH+>=]v('*9˽kZ6OO0v:{o``B$pDaZQ8=,,Hk.K$N RJղPwc[Bkך濎\gfl`v9:ͲNNf"gLɱ:WbdwK35B77y(<\H|mkˊV2!ET*ro&[i4 Gvq6Ҷ6M:=ĹUUR[t8Pelެ ttBlAP{3A7[\39'sL,8eӒT{1?BPߑPߑAξz}(j흙|w, AW RNO3LNsȀ ?NIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_convergedr_3.png0000644000175000001440000000372512711405157025450 0ustar dalcinlusers00000000000000PNG  IHDR$;/.bKGDIDAThPSWo !i*.HR ̪T@bpM,hFMĠ`ݬdG_ UKLi~Eax5ؚ2>?;ysyYX^D'Lc޽(j#B///T KNZBҠ;t:HÚ5]"F}kV ³۹H3D'Ded72yY@׮ܰ^:=}}(??￑Ŏ1EQb=]ỏ҃h+)bPJOJZs~^A xХtt4K #^jlD@8r+;)տ٣oP?N r =|F@DEx-g(l,E35ei8;lNOC%͛-o QQ7n f2뚛jf5e ^$FݻsA0,[]kn^OW|ttgmSZ*uuFnFtdM߸ w%v|zzpGy󯴵eC^^Rg)*8W84sʾUQqOutr*)pJ;w.RdfB^yYA}1&Hn.RP&TA샳gl݊oq򏉉o<:t(9/O&+j*GP_)wL zj+$%;;LeD"+NfDFƞ<4PܺFd$P|٣G]5lvCk+gaa^pH$M*z |'*8x%500=!ҏF&IU[D'.qVVwYI 8:SZNPpXlWwLXl/wKZ6=֩SM.)3:3d_?< OOp~F_wڦo +CBk}}{} Z_-k..dbv6m ~􈙚:R_syo$ƒeLY"KJHe"vz9YZX @~z!n2stu򖖯JK!;o=|; ==qX nO8je0nWV@5N'kn-!aL0*wc1Mnر;w$'**N<遪|ȟ<R(q;$=twXODQZGߋ luJ\qC:2 shg7TNT=]355Za0jWXW*Q/j1 3*wc1E'{[ۯ++5Z-/|LĦMPd'{ ѡ$7Cݲehdd^IL:/ 6[߅E%=""2>M+n..q8;{m\>g _}un8uvb➔o i7bXɓ{Ҫ kTƂ/_d뚛]uO8ܹos掰T*d4=IwRRnwu&'H۱cZL߁, I11I #WPܹA-f2->>->~Yh̬߂d :Nvf ‚,,,t:]T'.TTbiiQK#D' petsc4py.PETSc.InsertMode
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PETSc for Python
Package petsc4py :: Module PETSc :: Class InsertMode
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Class InsertMode

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  ADD = 2
  ADD_ALL = 5
  ADD_ALL_VALUES = 5
  ADD_BC = 7
  ADD_BC_VALUES = 7
  ADD_VALUES = 2
  INSERT = 1
  INSERT_ALL = 4
  INSERT_ALL_VALUES = 4
  INSERT_BC = 6
  INSERT_BC_VALUES = 6
  INSERT_VALUES = 1
  MAX = 3
  MAX_VALUES = 3
  NOT_SET_VALUES = 0
  __qualname__ = 'InsertMode'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:47 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_sf.png0000644000175000001440000000353212711405156023473 0ustar dalcinlusers00000000000000PNG  IHDRG[!bKGDIDATxoLǿbf/ZqZIQ;@0W\`taպUnʆFrk,KԸ"e՛KpMXef ACeȴO4YpJ+p<[[8Wۇf;$y9Og][a0=n0p] t:˅ǏGձl>n޼ ˅ׯj̙3p8hiiA[[<N< ۥ߈376643 M{T*H[:fiDDDQ$"իWT t:r劔+jEa`hZnl߾=Fnn~ʕkN:XhQX^zz:ggg#;;;.̈,cΞ={PSSuW Ν;ă^PØ9/3\.ÀauJN~JT#3p896 v]f,JμyPRR2EB.*--Ug9 \.Àa0rp9 \.Àa0rp9 \.Àa0rp9 Z%6MMM' hbo$U]]]𝽬b^ejRQ199kuEw^\eY0^y9׮)Y}%ڻnG9kעh)YU9nŀa0P|h0? o0`wq1,oyf > %P\λ |Z-~ZC܏_|YYJտpaΆ:#?}VNJDq9IMſv ?|(t*Eq9 OVo/j4bGe%q|l petsc4py.PETSc.DM.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class DM :: Class Type
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Class Type

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  CARTESIAN = 'cartesian'
  COMPOSITE = 'composite'
  DA = 'da'
  MOAB = 'moab'
  NETWORK = 'network'
  PATCH = 'patch'
  PLEX = 'plex'
  REDUNDANT = 'redundant'
  SHELL = 'shell'
  SLICED = 'sliced'
  __qualname__ = 'DMType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:46 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.TAO-class.html0000644000175000001440000016416312711405157023400 0ustar dalcinlusers00000000000000 petsc4py.PETSc.TAO
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PETSc for Python
Package petsc4py :: Module PETSc :: Class TAO
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Class TAO

TAO Solver
Nested Classes [hide private]
  Reason
TAO Solver Termination Reasons
  Type
TAO Solver Types
Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
cancelMonitor(self)
 
computeConstraints(self, Vec x, Vec c)
 
computeDualVariables(self, Vec xl, Vec xu)
 
computeGradient(self, Vec x, Vec g)
 
computeHessian(self, Vec x, Mat H, Mat P=None)
 
computeJacobian(self, Vec x, Mat J, Mat P=None)
 
computeObjective(self, Vec x)
 
computeObjectiveGradient(self, Vec x, Vec g)
 
computeSeparableObjective(self, Vec x, Vec f)
 
computeVariableBounds(self, Vec xl, Vec xu)
 
create(self, comm=None)
 
destroy(self)
 
getAppCtx(self)
 
getConstraintTolerances(self)
 
getConvergedReason(self)
 
getConvergenceTest(self)
 
getFunctionValue(self)
 
getGradient(self)
 
getGradientNorm(self)
 
getIterationNumber(self)
 
getKSP(self)
 
getLMVMH0(self)
 
getLMVMH0KSP(self)
 
getMonitor(self)
 
getObjectiveValue(self)
 
getOptionsPrefix(self)
 
getSolution(self)
 
getSolutionNorm(self)
 
getSolutionStatus(self)
 
getTolerances(self)
 
getType(self)
 
getVariableBounds(self)
 
setAppCtx(self, appctx)
 
setConstraintTolerances(self, catol=None, crtol=None)
 
setConstraints(self, constraints, Vec C=None, args=None, kargs=None)
 
setConvergedReason(self, reason)
 
setConvergenceTest(self, converged, args=None, kargs=None)
 
setFromOptions(self)
 
setGradient(self, gradient, args=None, kargs=None)
 
setGradientNorm(self, Mat mat)
 
setHessian(self, hessian, Mat H=None, Mat P=None, args=None, kargs=None)
 
setInitial(self, Vec x)
 
setInitialTrustRegionRadius(self, radius)
 
setJacobian(self, jacobian, Mat J=None, Mat P=None, args=None, kargs=None)
 
setJacobianDesign(self, jacobian_design, Mat J=None, args=None, kargs=None)
 
setJacobianState(self, jacobian_state, Mat J=None, Mat P=None, Mat I=None, args=None, kargs=None)
 
setLMVMH0(self, Mat mat)
 
setMonitor(self, monitor, args=None, kargs=None)
 
setObjective(self, objective, args=None, kargs=None)
 
setObjectiveGradient(self, objgrad, args=None, kargs=None)
 
setOptionsPrefix(self, prefix)
 
setSeparableObjective(self, separable, Vec O=None, args=None, kargs=None)
 
setStateDesignIS(self, IS state, IS design)
 
setTolerances(self, gatol=None, grtol=None, gttol=None)
 
setType(self, tao_type)
 
setUp(self)
 
setVariableBounds(self, varbounds, args=None, kargs=None)
 
solve(self, Vec x=None)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  appctx
  cnorm
  converged
  ctol
  diverged
  ftol
  function
  gnorm
  gradient
  gtol
  iterating
  its
  ksp
  objective
  reason
  solution

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getOptionsPrefix(self)

 
Overrides: Object.getOptionsPrefix

getType(self)

 
Overrides: Object.getType

setFromOptions(self)

 
Overrides: Object.setFromOptions

setOptionsPrefix(self, prefix)

 
Overrides: Object.setOptionsPrefix

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:51 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_schurfactt.png0000644000175000001440000000330012711405155025221 0ustar dalcinlusers00000000000000PNG  IHDRy$"7bKGDuIDAThiPgǟrFZ@iS,V r3:"0L,Xj I((: 2C#[Q  $*EHR !-rDef?dwݼ8PR0@H"\@@@{l6jk^S^^ڻi@xOcc থ}sgIj*vyGjj:"#E;^ckX^i.7Z:NNdrr+m35 tuR. NNY*)1ݱC%CO\`u55:rrμ%ڒb2? X[jk訥m*** 7YYf&&fnN_ նlTUPbri4HR?TT*-E+ss|lvھ}~ OM]vtnJaDmQ٩յftՕt9"vdJJ@b"Ҟr,,?FҨllqɔY#324llԭ#32|q}=x~|,,,Rrs h֮8*=H˒VPCXRF9<4.|`q031c)?'&սWX:ZIʆ@;6JP[[#QXtdע7IK$5Yh:;UW@nEw!!C %%Yڅv9ﯬx&^1xjhzx([Z MnRJtLNO͗DlPt环 :ngA \8q UVfjj SBCmm&vx&w;; @H <` LM^jj|ˢ z-`&%MsDcc$"BW42x!vvv^9s xv8<" >RRZ P(}`Ypeltw?y,;}_$ff<"+.ΊC"t߈]E}}ݻ{D 4>9g0EUEeFvw 'ZZ]zVRPsq񌊪jib2{zN_..}}ǓRTF{PV>3;;;7YV73s6;8\Aҕ+.. RSy0J= lmc)SIF/ܹ99qTm}bPĒ1de**HO>/RDDE}*U#"|cd/GGtR{D-i]Ā2x![[^bqr"=cd8r*5HU挂[X.+nCgf>J#2JKKݑgffɼzfrξލ?TTᵐ^67ܼ(u億5H!;7vz,y,E,ccKya69222H1[;}cJ ;^ckpbgdYIENDB`petsc4py-3.7.0/docs/apiref/toc-everything.html0000644000175000001440000003273512711405152022124 0ustar dalcinlusers00000000000000 Everything

Everything

All Classes

petsc4py.PETSc.AO
petsc4py.PETSc.AO.Type
petsc4py.PETSc.Comm
petsc4py.PETSc.DM
petsc4py.PETSc.DM.BoundaryType
petsc4py.PETSc.DM.Type
petsc4py.PETSc.DMComposite
petsc4py.PETSc.DMDA
petsc4py.PETSc.DMDA.ElementType
petsc4py.PETSc.DMDA.InterpolationType
petsc4py.PETSc.DMDA.StencilType
petsc4py.PETSc.DMPlex
petsc4py.PETSc.DMShell
petsc4py.PETSc.Error
petsc4py.PETSc.IS
petsc4py.PETSc.IS.Type
petsc4py.PETSc.InsertMode
petsc4py.PETSc.KSP
petsc4py.PETSc.KSP.ConvergedReason
petsc4py.PETSc.KSP.NormType
petsc4py.PETSc.KSP.Type
petsc4py.PETSc.LGMap
petsc4py.PETSc.LGMap.MapType
petsc4py.PETSc.Log
petsc4py.PETSc.LogClass
petsc4py.PETSc.LogEvent
petsc4py.PETSc.LogStage
petsc4py.PETSc.Mat
petsc4py.PETSc.Mat.AssemblyType
petsc4py.PETSc.Mat.FactorShiftType
petsc4py.PETSc.Mat.InfoType
petsc4py.PETSc.Mat.Option
petsc4py.PETSc.Mat.OrderingType
petsc4py.PETSc.Mat.SORType
petsc4py.PETSc.Mat.Structure
petsc4py.PETSc.Mat.Type
petsc4py.PETSc.NormType
petsc4py.PETSc.NullSpace
petsc4py.PETSc.Object
petsc4py.PETSc.Options
petsc4py.PETSc.PC
petsc4py.PETSc.PC.ASMType
petsc4py.PETSc.PC.CompositeType
petsc4py.PETSc.PC.GAMGType
petsc4py.PETSc.PC.GASMType
petsc4py.PETSc.PC.MGType
petsc4py.PETSc.PC.SchurFactType
petsc4py.PETSc.PC.SchurPreType
petsc4py.PETSc.PC.Side
petsc4py.PETSc.PC.Type
petsc4py.PETSc.Partitioner
petsc4py.PETSc.PartitionerType
petsc4py.PETSc.Random
petsc4py.PETSc.Random.Type
petsc4py.PETSc.SF
petsc4py.PETSc.SF.Type
petsc4py.PETSc.SNES
petsc4py.PETSc.SNES.ConvergedReason
petsc4py.PETSc.SNES.NormSchedule
petsc4py.PETSc.SNES.Type
petsc4py.PETSc.Scatter
petsc4py.PETSc.ScatterMode
petsc4py.PETSc.Section
petsc4py.PETSc.Sys
petsc4py.PETSc.TAO
petsc4py.PETSc.TAO.Reason
petsc4py.PETSc.TAO.Type
petsc4py.PETSc.TS
petsc4py.PETSc.TS.ConvergedReason
petsc4py.PETSc.TS.EquationType
petsc4py.PETSc.TS.ExactFinalTime
petsc4py.PETSc.TS.ProblemType
petsc4py.PETSc.TS.Type
petsc4py.PETSc.Vec
petsc4py.PETSc.Vec.Option
petsc4py.PETSc.Vec.Type
petsc4py.PETSc.Viewer
petsc4py.PETSc.Viewer.Format
petsc4py.PETSc.Viewer.Mode
petsc4py.PETSc.Viewer.Size
petsc4py.PETSc.Viewer.Type
petsc4py.PETSc.ViewerHDF5
petsc4py.PETSc._DMComposite_access
petsc4py.PETSc._DMDA_Vec_array
petsc4py.PETSc._IS_buffer
petsc4py.PETSc._Mat_Stencil
petsc4py.PETSc._Vec_LocalForm
petsc4py.PETSc._Vec_buffer

All Functions

petsc4py.PETSc._finalize
petsc4py.PETSc._initialize
petsc4py.get_include
petsc4py.init
petsc4py.lib.Import
petsc4py.lib.ImportPETSc
petsc4py.lib.getInitArgs
petsc4py.lib.getPathArch
petsc4py.lib.getPathArchPETSc

All Variables

petsc4py.PETSc.COMM_NULL
petsc4py.PETSc.COMM_SELF
petsc4py.PETSc.COMM_WORLD
petsc4py.PETSc.DECIDE
petsc4py.PETSc.DEFAULT
petsc4py.PETSc.DETERMINE
petsc4py.PETSc.INFINITY
petsc4py.PETSc.NINFINITY
petsc4py.PETSc.PINFINITY
petsc4py.PETSc.__arch__
petsc4py.PETSc.__package__
petsc4py.PETSc.__pyx_capi__
petsc4py.PETSc.__type_registry__
petsc4py.__credits__
petsc4py.__package__
petsc4py.lib.__package__
[hide private] petsc4py-3.7.0/docs/apiref/class_hierarchy_for_comm.png0000644000175000001440000000142112711405152024005 0ustar dalcinlusers00000000000000PNG  IHDRH$1bKGDIDATXc?pLZQ 9 $''322~aD.<7011E$d%$,tui/?~񂁁/,,Vvu]2ǐ-v[g̘lYkn.+ K{^gOܹS3eJL cgWwhIMb#G6Mmk RY)%*j喑fiYDU t[܆\~ծ] ݖѶPj`cC [ a;`wbb"j CrIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_interpolat.png0000644000175000001440000000275512711405153025247 0ustar dalcinlusers00000000000000PNG  IHDR$(n bKGDIDAThLgǟ ha[ѥU4:;)(B3lJpV`llv*Nc0q*B 73G4Qd*?m7hI/>=|}(vHH@A,H?} ۊ.x<`@-JN/pY'l6pBB^mՊ}-?F<]o+gE,H?K] 6]Z-E '@q΄N=) :`&._ݣh4W++ih4GDqޯ^e2v)S8< !L& uE v˕'O  $60b䕔EG畔X,zy@nifMPtvd6 "["&[[Ri@TLx߉EGWq E޽H84H~g#a:VY zkU%UUOj:vk׾>|ﯬ~N9pbiXwRyW***rɹ ν{JgEQ\qjhbusjuKK8Wz~dK :իg+]8!!|.W!5\ĕ24.nZ@ᆆFmVUW7bnh!??sEYYUuuhB??kkU3LNp0 ȃePHZ_S=#@G3biӐFYho0,Lf`lGׇv:3CCH ay5Pbb~jjiۏҌ1R]H&|l ?F݇\.tvwgR/ ɔ_TLfsZ4FwNS$t|^D2J3H=M4 !ur3>+ƹK֭ݥVJ+]]{&<2G L9EG X֢G7&&bhvs?XeB!:sΦҘx petsc4py.PETSc._DMComposite_access
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PETSc for Python
Package petsc4py :: Module PETSc :: Class _DMComposite_access
[hide private]
[frames] | no frames]

Class _DMComposite_access

Instance Methods [hide private]
 
__enter__(self)
 
__exit__(self, *exc)
a new object with type S, a subtype of T
__new__(S, ...)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:52 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.TAO.Reason-class.html0000644000175000001440000002264412711405157024623 0ustar dalcinlusers00000000000000 petsc4py.PETSc.TAO.Reason
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PETSc for Python
Package petsc4py :: Module PETSc :: Class TAO :: Class Reason
[hide private]
[frames] | no frames]

Class Reason

TAO Solver Termination Reasons
Class Variables [hide private]
  CONTINUE_ITERATING = 0
  CONVERGED_GATOL = 3
  CONVERGED_GRTOL = 4
  CONVERGED_GTTOL = 5
  CONVERGED_ITERATING = 0
  CONVERGED_MINF = 7
  CONVERGED_STEPTOL = 6
  CONVERGED_USER = 8
  DIVERGED_LS_FAILURE = -6
  DIVERGED_MAXFCN = -5
  DIVERGED_MAXITS = -2
  DIVERGED_NAN = -4
  DIVERGED_TR_REDUCTION = -7
  DIVERGED_USER = -8
  ITERATING = 0
  __qualname__ = 'TAOConvergedReason'
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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:51 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.PC.Type-class.html0000644000175000001440000005737512711405156024204 0ustar dalcinlusers00000000000000 petsc4py.PETSc.PC.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class PC :: Class Type
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[frames] | no frames]

Class Type

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  AINVCUSP = 'ainvcusp'
  ASM = 'asm'
  BDDC = 'bddc'
  BFBT = 'bfbt'
  BICGSTABCUSP = 'bicgstabcusp'
  BJACOBI = 'bjacobi'
  CHOLESKY = 'cholesky'
  COMPOSITE = 'composite'
  CP = 'cp'
  EISENSTAT = 'eisenstat'
  EXOTIC = 'exotic'
  FIELDSPLIT = 'fieldsplit'
  GALERKIN = 'galerkin'
  GAMG = 'gamg'
  GASM = 'gasm'
  HYPRE = 'hypre'
  ICC = 'icc'
  ILU = 'ilu'
  JACOBI = 'jacobi'
  KACZMARZ = 'kaczmarz'
  KSP = 'ksp'
  LSC = 'lsc'
  LU = 'lu'
  MAT = 'mat'
  MG = 'mg'
  ML = 'ml'
  NN = 'nn'
  NONE = 'none'
  PARMS = 'parms'
  PBJACOBI = 'pbjacobi'
  PFMG = 'pfmg'
  PYTHON = 'python'
  REDISTRIBUTE = 'redistribute'
  REDUNDANT = 'redundant'
  SACUSP = 'sacusp'
  SACUSPPOLY = 'sacusppoly'
  SHELL = 'shell'
  SOR = 'sor'
  SPAI = 'spai'
  SVD = 'svd'
  SYSPFMG = 'syspfmg'
  TELESCOPE = 'telescope'
  TFS = 'tfs'
  __qualname__ = 'PCType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py-module.html0000644000175000001440000002763712711405152022220 0ustar dalcinlusers00000000000000 petsc4py
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PETSc for Python
Package petsc4py
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Package petsc4py

This package is an interface to PETSc libraries.

PETSc (the Portable, Extensible Toolkit for Scientific Computation) is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI standard for all message-passing communication.

Version: 3.7.0

Author: Lisandro Dalcin

Submodules [hide private]
  • petsc4py.PETSc: Portable, Extensible Toolkit for Scientific Computation
  • petsc4py.lib: Extension modules for different PETSc configurations.

Functions [hide private]
 
init(args=None, arch=None, comm=None)
Initialize PETSc.
 
get_include()
Return the directory in the package that contains header files.
Variables [hide private]
  __credits__ = 'PETSc Team <petsc-maint@mcs.anl.gov>'
  __package__ = None
Function Details [hide private]

init(args=None, arch=None, comm=None)

 

Initialize PETSc.

This function should be called only once, typically at the very beginning of the bootstrap script of an application.
Parameters:
  • args - command-line arguments, usually the 'sys.argv' list.
  • arch - specific configuration to use.
  • comm - MPI commmunicator

get_include()

 

Return the directory in the package that contains header files.

Extension modules that need to compile against petsc4py should use this function to locate the appropriate include directory. Using Python distutils (or perhaps NumPy distutils):

import petsc4py
Extension('extension_name', ...
          include_dirs=[..., petsc4py.get_include()])

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:46 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.NullSpace-class.html0000644000175000001440000004671412711405155024642 0ustar dalcinlusers00000000000000 petsc4py.PETSc.NullSpace
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PETSc for Python
Package petsc4py :: Module PETSc :: Class NullSpace
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Class NullSpace

Instance Methods [hide private]
 
__call__(...) <==> x(...)
a new object with type S, a subtype of T
__new__(S, ...)
 
create(self, constant=False, vectors=(), comm=None)
 
createRigidBody(self, Vec coords)
 
destroy(self)
 
getFunction(self)
 
getVecs(self)
 
hasConstant(self)
 
remove(self, Vec vec)
 
setFunction(self, function, args=None, kargs=None)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, getType, incRef, incrementTabLevel, query, setAttr, setFromOptions, setName, setOptionsPrefix, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:49 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_elementtyp.png0000644000175000001440000000233612711405153025247 0ustar dalcinlusers00000000000000PNG  IHDRm$ #bKGDIDAThc?(0   GpECxt(4~-+Wc,I0 e4`kdߦ3c}|<~|ժɓcv-2 3=Zš5[ Ù]\: 1H] RR6..c3SMQkh//߿GzzV&%Zd<)܆xO)>]RǵzRUVBmϟ petsc4py.PETSc.Mat.InfoType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Mat :: Class InfoType
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Class InfoType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  GLOBAL_MAX = 2
  GLOBAL_SUM = 3
  LOCAL = 1
  __qualname__ = 'MatInfoType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.TS.Type-class.html0000644000175000001440000003754712711405157024230 0ustar dalcinlusers00000000000000 petsc4py.PETSc.TS.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class TS :: Class Type
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Class Type

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  ALPHA = 'alpha'
  ALPHA2 = 'alpha2'
  ARKIMEX = 'arkimex'
  BDF = 'bdf'
  BE = 'beuler'
  BEULER = 'beuler'
  CN = 'cn'
  CRANK_NICOLSON = 'cn'
  EIMEX = 'eimex'
  EULER = 'euler'
  FE = 'euler'
  GL = 'gl'
  MIMEX = 'mimex'
  PSEUDO = 'pseudo'
  PYTHON = 'python'
  RK = 'rk'
  ROSW = 'rosw'
  RUNGE_KUTTA = 'rk'
  SSP = 'ssp'
  SUNDIALS = 'sundials'
  TH = 'theta'
  THETA = 'theta'
  __qualname__ = 'TSType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
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petsc4py-3.7.0/docs/apiref/class_hierarchy_for_error.png0000644000175000001440000001773512711405153024223 0ustar dalcinlusers00000000000000PNG  IHDRKibKGDIDATx}LSi7o- ."Z3;d* (Fv- !cbd} q31L5Affu8C &3Xg"qhP灖IN՞sΗRN%DD`L$fzM&<< qM b˴_>3x+߼aәD"<ᙨppp777C"L>%ɨe޼yċ/&u# b,3*𭭭P(B;""qܻw?nݺN~@*™ےәnGwwV(8~#** ,ĉشiӤ7ЦʹpWA#::Jč7²eׇ! 11QQQCOO>ƚ$%%ATXv-'2Ӄ۷CP >>j^M \˗c8y]mm-RRR ˱xb\|y\JP*B?oČ }/fʹxcοh448qlBϞ=#VKWQ^^m۶:;;)::߿ODDb jHk֬!ZO^O(--T* 98srrhÆ BZV\IG)##L&]pPww7Y,={6UTT`/RPPY,1kl6Soo/2""`*((Ouuuyݗ:ܯ0x Fd2 B֭[JDD&)%%E8 "$ڏ=vקpZvԘU*"l6J竫IR*@w@zF#d2:uL&d6ixxxZ`_q^'"b0ݽ{}yXu,\DŽ^.9<<\xR)=|6Q8*CV%\=~fD(##BCCitMv>9}}}t1JHH NDD555n:JMM|ξb _ _ z& v={7nľ}mbccSЀcǎ'zMMM8hHR ..NhϚZ ݎk׮h4bǎشiFBBB?jEff&7>[M͛qAA"==ΝnGAA QUU۷oÇCAahkkڧÞ={܌СCغubqL&CVVt:9r999M" -- fL&CHH/_͋/ىN<{ 'N@BB000͆`XVf}y\̈s/3|7oEFFΝ;Μ9CV"FDDׯ_2Ojbcc)<%$$);;J}Xь9D'sXLs.37y3]vz \L+JTTTz \L3&8LT8LT8LT8LT\$(CSϱ{,$R裏{ Hf.ws {`0,0UjO_s&RvB[P>(,X`;R +  Rb ƍdTUUaٲeJJJ(塧kKrMM T*QTT]9_{zz}v( CVȕ+W|r̟?'OEJJ r9/^˗/vfJM i4?qmٲ={FZV^M "<ڶmuvvRtt4ݿiŊj֬YCjkzPZZ555Q}}=T**--spnІ Z-\JKKc D.\ MfϞMd0ŋDml6,ӽ&h44>99 оudxJII IDDBѣGt0V+$\䶷ljI. Q5pܺ:ȠPZ~=ݼy} t/&*+ zЫ>L&xgbƍطoMll,>}*p1^/  TV᱖ Y\KiZaq5Fر6mh2c5 h8x ڠjsn۷Q[[ Ç{nyaϞ=hnnƃp!lݺUxbQ&!++ EEEx t:9&HJtuufA&!$$PYY/_ŋtŸ/甦i޼yI;w>:s Zl6]~bbbh4R?jp&O%.\H j [ΝKDA3KC{.p\lk4Zd Srr2Ԍn!S_9dr>aldL |XXvaL)bT*QQQaL)b  ʄ|~e {'ߗ&!!<">>~g9nRuD|xDDDDDDDDDDDDDDDDDDDDDDDDDD۷}W+y%KPP}W^ ƟlJ̄`Fbl*9<<<<Qyҿlb@VcѢE3g.]Ou#H$n`Bohmm;＃O ֆ> PTTш3gθq:w-Zaook4a)I|T__?걻wRbb"M~^> i4MȔfppňRDqq1q d2l2ahh%%%HLLDTTO嶦IIIP*(**֮] X`K|OOoBxja!Hp,_ɓ'jkk\ŋnkϣ[xWeFHHbbbpq9wFyy9-[gxwq}}:j_"11w؏7}ǣuuunm]]y?qmٲ={FZV^M "<ڶmuvvRtt4ݿiŊj֬YCjkW4jjjzRTTZZ ɡ 6PKK iZZr%ѫW 2Lt@dXhTQQA.^HAAAdXƬ_M+Vٳgӯk*//OSoo/SAAutt'|BN>MJ~/>OOOO?CCfe8oGfۺ;o~BLAhߺuRSSd2Q||<""JJJjѣQmw}:jGYRy f#TJ:NxT**;wuӥh4L&SNd"Nfchh멬V\IR\2&"b0ݽ{w4ݸ-[F^txӹ~q2x9=}s髀^.#<<\xR)=|6Q$*CV%\ND cṑ ͛7b*tQsCMM [RSS)??%ckΜ90ow}:oو3r,cqϹ뎇9B^dB}}=gϞƍo>aX<}Th744رc> z^wSSbcc=1::Rc---ڳfjnڵk0رc6m.GccD"o~ 9.ՊLo]k\o>|81Ns2k?ϹKݝ ͛qAA"==ΝnGAA QUU۷oÇCAa?/S?/^@gg׭xΔi޼yI;w>:s ZJd]~bbbh4R?jp&Oe.\H j [ΝKDHI111w^R KȶF%KPpp0%''SMM͘RJJ ͙3z-ڿ1>}ϟO ty&Rq\CCCT^^N*BCC Ox>ƚ 4VvիʂK.cC"@ 33zhc>aaaصkWixR@M>  MƦ{h466| {syyM+?Ւ6xDDDDDDDDDDDDDDDDDDDDDDDDDD盩~>5!󬣣pڵdfX`֯_Ӻ>[R&2])((>fhhF&l^x F 1ᙨppp.͐H$OD2j3g}]444}_u|0rNf|[[[P(vDD?w  Z-.],7M<˴B>@է ^O8 zǞ?NodX0h4qP*(.. nܸ8L&@UU-[> B^^zzz鸌 )) JEEEڵkmzۡP(Z~.W\1|}1W |rr2 }-JMM%""D񔒒"())GF(Vh4R<fT*%N'<_]]M*J8;w˺h$LFN"Dvf3 FckݻwGmvLU<ܯ8=z)x\Rp2Jrݧ`VUXÇ$=e;VKr\8Ǐ#uuuA~zyq܎>/9済\;X| }{j{:g9sfTkuc zɄz@{{;Ξ=7b߾}6xnhhc|z簾&zctt4R)Z[[ZZZ'gr-jnǵk`4clڴ Fч!!!(((@cc˻4υ|.ۍ5V__d1۾yۉ0aܼy3<6hZܹs(((@aa!pmrssqat:t:޽mmm^tسg:t[nX,.cdBQQJZp!) *,,$Jn:;w.^F#Rdd$޽{.<\5 -Y)99jjj\o60ѓ'O>C%KPMMOSom,#X2~z]Ni|jO }}}k&t?HKKCPfk}W uQ_8GS OiFxqw3_ܸZ^!@aJ_:C`4LT8LT8LTx$nI ]E"`>9kno$5_޿t||ƨvݷߢlG@|ZԧO`eۺo L{ }V+,. }%݋NMJ~nϕ+ZYHr\eo?} i=/]Q!|kX(ӟ?Hc]8~*!:ɋ~ݍaK~ ;v[x?IdNu##!5 /<с8q%Ʉs<;7 d7(:qY8r,r~ۉqyyc>/<='O>e25?8o[U qn0\C۲7sx&*x&*x&*x&*x&*x&*x&*>M_ ?ܹs=&~#GnO%'Khh(9aL)"@S&*x&*A&&M!/KѼIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.ScatterMode-class.html0000644000175000001440000002420012711405156025151 0ustar dalcinlusers00000000000000 petsc4py.PETSc.ScatterMode
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PETSc for Python
Package petsc4py :: Module PETSc :: Class ScatterMode
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Class ScatterMode

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  FORWARD = 0
  FORWARD_LOCAL = 2
  REVERSE = 1
  REVERSE_LOCAL = 3
  SCATTER_FORWARD = 0
  SCATTER_FORWARD_LOCAL = 2
  SCATTER_LOCAL = 2
  SCATTER_REVERSE = 1
  SCATTER_REVERSE_LOCAL = 3
  __qualname__ = 'ScatterMode'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
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petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.SNES.Type-class.html0000644000175000001440000003555312711405156024444 0ustar dalcinlusers00000000000000 petsc4py.PETSc.SNES.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class SNES :: Class Type
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Class Type

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  ANDERSON = 'anderson'
  ASPIN = 'aspin'
  COMPOSITE = 'composite'
  FAS = 'fas'
  KSPONLY = 'ksponly'
  MS = 'ms'
  NASM = 'nasm'
  NCG = 'ncg'
  NEWTONLS = 'newtonls'
  NEWTONTR = 'newtontr'
  NGMRES = 'ngmres'
  NGS = 'ngs'
  NRICHARDSON = 'nrichardson'
  PYTHON = 'python'
  QN = 'qn'
  SHELL = 'shell'
  TEST = 'test'
  VINEWTONRSLS = 'vinewtonrsls'
  VINEWTONSSLS = 'vinewtonssls'
  __qualname__ = 'SNESType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.TS.ConvergedReason-class.html0000644000175000001440000002401612711405157026356 0ustar dalcinlusers00000000000000 petsc4py.PETSc.TS.ConvergedReason
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PETSc for Python
Package petsc4py :: Module PETSc :: Class TS :: Class ConvergedReason
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Class ConvergedReason

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  CONVERGED_EVENT = 4
  CONVERGED_ITERATING = 0
  CONVERGED_ITS = 2
  CONVERGED_TIME = 1
  CONVERGED_USER = 3
  DIVERGED_NONLINEAR_SOLVE = -1
  DIVERGED_STEP_REJECTED = -2
  ITERATING = 0
  __qualname__ = 'TSConvergedReason'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:51 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/toc-petsc4py.PETSc-module.html0000644000175000001440000001474512711405152023714 0ustar dalcinlusers00000000000000 PETSc

Module PETSc

Classes

AO
Comm
DA
DM
DMComposite
DMDA
DMPlex
DMShell
Error
IS
InsertMode
KSP
LGMap
Log
LogClass
LogEvent
LogStage
Mat
NormType
NullSpace
Object
Options
PC
Partitioner
PartitionerType
Random
SF
SNES
Scatter
ScatterMode
Section
Sys
TAO
TS
Vec
Viewer
ViewerHDF5
_DMComposite_access
_DMDA_Vec_array
_IS_buffer
_Mat_Stencil
_Vec_LocalForm
_Vec_buffer

Functions

_finalize
_initialize

Variables

COMM_NULL
COMM_SELF
COMM_WORLD
DECIDE
DEFAULT
DETERMINE
INFINITY
NINFINITY
PINFINITY
__arch__
__package__
__pyx_capi__
__type_registry__
[hide private] petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Mat.Type-class.html0000644000175000001440000007600612711405155024412 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Mat.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Mat :: Class Type
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Class Type

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  AIJ = 'aij'
  AIJCRL = 'aijcrl'
  AIJCUSP = 'aijcusp'
  AIJCUSPARSE = 'aijcusparse'
  AIJPERM = 'aijperm'
  AIJVIENNACL = 'aijviennacl'
  BAIJ = 'baij'
  BLOCKMAT = 'blockmat'
  BSTRM = 'bstrm'
  COMPOSITE = 'composite'
  DAAD = 'daad'
  DENSE = 'dense'
  ELEMENTAL = 'elemental'
  FFT = 'fft'
  FFTW = 'fftw'
  HYPRESSTRUCT = 'hypresstruct'
  HYPRESTRUCT = 'hyprestruct'
  IS = 'is'
  LOCALREF = 'localref'
  LRC = 'lrc'
  MAIJ = 'maij'
  MFFD = 'mffd'
  MPIADJ = 'mpiadj'
  MPIAIJ = 'mpiaij'
  MPIAIJCRL = 'mpiaijcrl'
  MPIAIJCUSP = 'mpiaijcusp'
  MPIAIJCUSPARSE = 'mpiaijcusparse'
  MPIAIJPERM = 'mpiaijperm'
  MPIAIJVIENNACL = 'mpiaijviennacl'
  MPIBAIJ = 'mpibaij'
  MPIBSTRM = 'mpibstrm'
  MPIDENSE = 'mpidense'
  MPIMAIJ = 'mpimaij'
  MPISBAIJ = 'mpisbaij'
  MPISBSTRM = 'mpisbstrm'
  NEST = 'nest'
  NORMAL = 'normal'
  NORMALHERMITIAN = 'normalh'
  PREALLOCATOR = 'preallocator'
  PYTHON = 'python'
  SAME = 'same'
  SBAIJ = 'sbaij'
  SBSTRM = 'sbstrm'
  SCATTER = 'scatter'
  SCHURCOMPLEMENT = 'schurcomplement'
  SEQAIJ = 'seqaij'
  SEQAIJCRL = 'seqaijcrl'
  SEQAIJCUSP = 'seqaijcusp'
  SEQAIJCUSPARSE = 'seqaijcusparse'
  SEQAIJPERM = 'seqaijperm'
  SEQAIJVIENNACL = 'seqaijviennacl'
  SEQBAIJ = 'seqbaij'
  SEQBSTRM = 'seqbstrm'
  SEQCUFFT = 'seqcufft'
  SEQDENSE = 'seqdense'
  SEQMAIJ = 'seqmaij'
  SEQSBAIJ = 'seqsbaij'
  SEQSBSTRM = 'seqsbstrm'
  SHELL = 'shell'
  SUBMATRIX = 'submatrix'
  TRANSPOSEMAT = 'transpose'
  __qualname__ = 'MatType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:49 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.SNES-class.html0000644000175000001440000024562412711405156023526 0ustar dalcinlusers00000000000000 petsc4py.PETSc.SNES
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PETSc for Python
Package petsc4py :: Module PETSc :: Class SNES
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Class SNES

Nested Classes [hide private]
  ConvergedReason
  NormSchedule
  Type
Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
callConvergenceTest(self, its, xnorm, ynorm, fnorm)
 
cancelMonitor(self)
 
computeFunction(self, Vec x, Vec f)
 
computeJacobian(self, Vec x, Mat J, Mat P=None)
 
computeObjective(self, Vec x)
 
create(self, comm=None)
 
createPython(self, context=None, comm=None)
 
destroy(self)
 
getAppCtx(self)
 
getCompositeNumber(self)
 
getCompositeSNES(self, n)
 
getConvergedReason(self)
 
getConvergenceHistory(self)
 
getConvergenceTest(self)
 
getDM(self)
 
getFASCoarseSolve(self)
 
getFASCycleSNES(self, level)
 
getFASInjection(self, level)
 
getFASInterpolation(self, level)
 
getFASLevels(self)
 
getFASRestriction(self, level)
 
getFASSmoother(self, level)
 
getFASSmootherDown(self, level)
 
getFASSmootherUp(self, level)
 
getFunction(self)
 
getFunctionEvaluations(self)
 
getInitialGuess(self)
 
getIterationNumber(self)
 
getJacobian(self)
 
getKSP(self)
 
getKSPFailures(self)
 
getLinearSolveFailures(self)
 
getLinearSolveIterations(self)
 
getMaxFunctionEvaluations(self)
 
getMaxKSPFailures(self)
 
getMaxLinearSolveFailures(self)
 
getMaxNonlinearStepFailures(self)
 
getMaxStepFailures(self)
 
getMonitor(self)
 
getNPC(self)
 
getNonlinearStepFailures(self)
 
getNormSchedule(self)
 
getObjective(self)
 
getOptionsPrefix(self)
 
getParamsEW(self)
 
getPythonContext(self)
 
getRhs(self)
 
getSolution(self)
 
getSolutionUpdate(self)
 
getStepFailures(self)
 
getTolerances(self)
 
getType(self)
 
getUpdate(self)
 
getUseEW(self)
 
getUseFD(self)
 
getUseMF(self)
 
getVIInactiveSet(self)
 
hasNPC(self)
 
logConvergenceHistory(self, norm, linear_its=0)
 
monitor(self, its, rnorm)
 
reset(self)
 
setAppCtx(self, appctx)
 
setConvergedReason(self, reason)
 
setConvergenceHistory(self, length=None, reset=False)
 
setConvergenceTest(self, converged, args=None, kargs=None)
 
setDM(self, DM dm)
 
setFASInjection(self, level, Mat mat)
 
setFASInterpolation(self, level, Mat mat)
 
setFASLevels(self, levels, comms=None)
 
setFASRScale(self, level, Vec vec)
 
setFASRestriction(self, level, Mat mat)
 
setFromOptions(self)
 
setFunction(self, function, Vec f, args=None, kargs=None)
 
setInitialGuess(self, initialguess, args=None, kargs=None)
 
setIterationNumber(self, its)
 
setJacobian(self, jacobian, Mat J, Mat P=None, args=None, kargs=None)
 
setKSP(self, KSP ksp)
 
setMaxFunctionEvaluations(self, max_funcs)
 
setMaxKSPFailures(self, max_fails)
 
setMaxLinearSolveFailures(self, max_fails)
 
setMaxNonlinearStepFailures(self, max_fails)
 
setMaxStepFailures(self, max_fails)
 
setMonitor(self, monitor, args=None, kargs=None)
 
setNPC(self, SNES snes)
 
setNormSchedule(self, normsched)
 
setObjective(self, objective, args=None, kargs=None)
 
setOptionsPrefix(self, prefix)
 
setParamsEW(self, version=None, rtol_0=None, rtol_max=None, gamma=None, alpha=None, alpha2=None, threshold=None)
 
setPythonContext(self, context)
 
setPythonType(self, py_type)
 
setResetCounters(self, reset=True)
 
setSolution(self, Vec vec)
 
setTolerances(self, rtol=None, atol=None, stol=None, max_it=None)
 
setType(self, snes_type)
 
setUp(self)
 
setUpdate(self, update, args=None, kargs=None)
 
setUseEW(self, flag=True, *targs, **kargs)
 
setUseFD(self, flag=True)
 
setUseMF(self, flag=True)
 
setVariableBounds(self, Vec xl, Vec xu)
 
solve(self, Vec b, Vec x)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  appctx
  atol
  converged
  diverged
  dm
  history
  iterating
  its
  ksp
  max_funcs
  max_it
  npc
  reason
  rtol
  stol
  use_ew
  use_fd
  use_mf
  vec_rhs
  vec_sol
  vec_upd

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getOptionsPrefix(self)

 
Overrides: Object.getOptionsPrefix

getType(self)

 
Overrides: Object.getType

setFromOptions(self)

 
Overrides: Object.setFromOptions

setOptionsPrefix(self, prefix)

 
Overrides: Object.setOptionsPrefix

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.DMDA.StencilType-class.html0000644000175000001440000002044312711405153025710 0ustar dalcinlusers00000000000000 petsc4py.PETSc.DMDA.StencilType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class DMDA :: Class StencilType
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Class StencilType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  BOX = 1
  STAR = 0
  __qualname__ = 'DMDAStencilType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
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petsc4py.PETSc.Viewer.Format.ASCII_INFO petsc4py.PETSc.Viewer.Format-class.html#ASCII_INFO petsc4py.PETSc.Viewer.Format.ASCII_MATLAB petsc4py.PETSc.Viewer.Format-class.html#ASCII_MATLAB petsc4py.PETSc.Viewer.Format.ASCII_FACTOR_INFO petsc4py.PETSc.Viewer.Format-class.html#ASCII_FACTOR_INFO petsc4py.PETSc.Viewer.Format.ASCII_XML petsc4py.PETSc.Viewer.Format-class.html#ASCII_XML petsc4py.PETSc.Viewer.Format.ASCII_SYMMODU petsc4py.PETSc.Viewer.Format-class.html#ASCII_SYMMODU petsc4py.PETSc.Viewer.Format.HDF5_VIZ petsc4py.PETSc.Viewer.Format-class.html#HDF5_VIZ petsc4py.PETSc.Viewer.Format.ASCII_VTK_CELL petsc4py.PETSc.Viewer.Format-class.html#ASCII_VTK_CELL petsc4py.PETSc.Viewer.Format.ASCII_MATHEMATICA petsc4py.PETSc.Viewer.Format-class.html#ASCII_MATHEMATICA petsc4py.PETSc.Viewer.Format.ASCII_PCICE petsc4py.PETSc.Viewer.Format-class.html#ASCII_PCICE petsc4py.PETSc.Viewer.Format.__qualname__ petsc4py.PETSc.Viewer.Format-class.html#__qualname__ petsc4py.PETSc.Viewer.Format.ASCII_COMMON petsc4py.PETSc.Viewer.Format-class.html#ASCII_COMMON petsc4py.PETSc.Viewer.Format.ASCII_DENSE petsc4py.PETSc.Viewer.Format-class.html#ASCII_DENSE petsc4py.PETSc.Viewer.Format.DRAW_PORTS petsc4py.PETSc.Viewer.Format-class.html#DRAW_PORTS petsc4py.PETSc.Viewer.Format.BINARY_MATLAB petsc4py.PETSc.Viewer.Format-class.html#BINARY_MATLAB petsc4py.PETSc.Viewer.Mode petsc4py.PETSc.Viewer.Mode-class.html petsc4py.PETSc.Viewer.Mode.READ petsc4py.PETSc.Viewer.Mode-class.html#READ petsc4py.PETSc.Viewer.Mode.APPEND petsc4py.PETSc.Viewer.Mode-class.html#APPEND petsc4py.PETSc.Viewer.Mode.APPEND_UPDATE petsc4py.PETSc.Viewer.Mode-class.html#APPEND_UPDATE petsc4py.PETSc.Viewer.Mode.A petsc4py.PETSc.Viewer.Mode-class.html#A petsc4py.PETSc.Viewer.Mode.UPDATE petsc4py.PETSc.Viewer.Mode-class.html#UPDATE petsc4py.PETSc.Viewer.Mode.WRITE petsc4py.PETSc.Viewer.Mode-class.html#WRITE petsc4py.PETSc.Viewer.Mode.U petsc4py.PETSc.Viewer.Mode-class.html#U petsc4py.PETSc.Viewer.Mode.W 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petsc4py.PETSc.Viewer.Type-class.html#BINARY petsc4py.PETSc.Viewer.Type.SOCKET petsc4py.PETSc.Viewer.Type-class.html#SOCKET petsc4py.PETSc.Viewer.Type.__qualname__ petsc4py.PETSc.Viewer.Type-class.html#__qualname__ petsc4py.PETSc.Viewer.Type.ASCII petsc4py.PETSc.Viewer.Type-class.html#ASCII petsc4py.PETSc.ViewerHDF5 petsc4py.PETSc.ViewerHDF5-class.html petsc4py.PETSc.Object.getAttr petsc4py.PETSc.Object-class.html#getAttr petsc4py.PETSc.Object.query petsc4py.PETSc.Object-class.html#query petsc4py.PETSc.Object.__lt__ petsc4py.PETSc.Object-class.html#__lt__ petsc4py.PETSc.ViewerHDF5.getGroup petsc4py.PETSc.ViewerHDF5-class.html#getGroup petsc4py.PETSc.Object.getTabLevel petsc4py.PETSc.Object-class.html#getTabLevel petsc4py.PETSc.Object.compose petsc4py.PETSc.Object-class.html#compose petsc4py.PETSc.Viewer.createVTK petsc4py.PETSc.Viewer-class.html#createVTK petsc4py.PETSc.Object.fortran petsc4py.PETSc.Object-class.html#fortran petsc4py.PETSc.Viewer.__call__ petsc4py.PETSc.Viewer-class.html#__call__ petsc4py.PETSc.Object.handle petsc4py.PETSc.Object-class.html#handle petsc4py.PETSc.Object.setOptionsPrefix petsc4py.PETSc.Object-class.html#setOptionsPrefix petsc4py.PETSc.Object.__deepcopy__ petsc4py.PETSc.Object-class.html#__deepcopy__ petsc4py.PETSc.Object.setFromOptions petsc4py.PETSc.Object-class.html#setFromOptions petsc4py.PETSc.Object.__gt__ petsc4py.PETSc.Object-class.html#__gt__ petsc4py.PETSc.Viewer.createDraw petsc4py.PETSc.Viewer-class.html#createDraw petsc4py.PETSc.Viewer.BINARY petsc4py.PETSc.Viewer-class.html#BINARY petsc4py.PETSc.Object.__nonzero__ petsc4py.PETSc.Object-class.html#__nonzero__ petsc4py.PETSc.Object.name petsc4py.PETSc.Object-class.html#name petsc4py.PETSc.Viewer.createBinary petsc4py.PETSc.Viewer-class.html#createBinary petsc4py.PETSc.Object.getClassId petsc4py.PETSc.Object-class.html#getClassId petsc4py.PETSc.Object.prefix petsc4py.PETSc.Object-class.html#prefix petsc4py.PETSc.Viewer.popFormat petsc4py.PETSc.Viewer-class.html#popFormat petsc4py.PETSc.Object.__copy__ petsc4py.PETSc.Object-class.html#__copy__ petsc4py.PETSc.Viewer.ASCII petsc4py.PETSc.Viewer-class.html#ASCII petsc4py.PETSc.Viewer.view petsc4py.PETSc.Viewer-class.html#view petsc4py.PETSc.Object.decRef petsc4py.PETSc.Object-class.html#decRef petsc4py.PETSc.Object.stateIncrease petsc4py.PETSc.Object-class.html#stateIncrease petsc4py.PETSc.Viewer.flush petsc4py.PETSc.Viewer-class.html#flush petsc4py.PETSc.Viewer.Type petsc4py.PETSc.Viewer.Type-class.html petsc4py.PETSc.Object.getName petsc4py.PETSc.Object-class.html#getName petsc4py.PETSc.Object.incrementTabLevel petsc4py.PETSc.Object-class.html#incrementTabLevel petsc4py.PETSc.Object.__ne__ petsc4py.PETSc.Object-class.html#__ne__ petsc4py.PETSc.Viewer.createHDF5 petsc4py.PETSc.Viewer-class.html#createHDF5 petsc4py.PETSc.Object.getOptionsPrefix petsc4py.PETSc.Object-class.html#getOptionsPrefix petsc4py.PETSc.Object.getDict petsc4py.PETSc.Object-class.html#getDict petsc4py.PETSc.Object.comm petsc4py.PETSc.Object-class.html#comm petsc4py.PETSc.Viewer.getFormat petsc4py.PETSc.Viewer-class.html#getFormat petsc4py.PETSc.Viewer.createNetCDF petsc4py.PETSc.Viewer-class.html#createNetCDF petsc4py.PETSc.ViewerHDF5.incrementTimestep petsc4py.PETSc.ViewerHDF5-class.html#incrementTimestep petsc4py.PETSc.Viewer.STDERR petsc4py.PETSc.Viewer-class.html#STDERR petsc4py.PETSc.Object.classid petsc4py.PETSc.Object-class.html#classid petsc4py.PETSc.Viewer.pushFormat petsc4py.PETSc.Viewer-class.html#pushFormat petsc4py.PETSc.Viewer.setType petsc4py.PETSc.Viewer-class.html#setType petsc4py.PETSc.ViewerHDF5.create petsc4py.PETSc.ViewerHDF5-class.html#create petsc4py.PETSc.Viewer.clearDraw petsc4py.PETSc.Viewer-class.html#clearDraw petsc4py.PETSc.Object.type petsc4py.PETSc.Object-class.html#type petsc4py.PETSc.Viewer.DRAW petsc4py.PETSc.Viewer-class.html#DRAW petsc4py.PETSc.Object.getRefCount petsc4py.PETSc.Object-class.html#getRefCount petsc4py.PETSc.Object.incRef petsc4py.PETSc.Object-class.html#incRef petsc4py.PETSc.Object.setName petsc4py.PETSc.Object-class.html#setName petsc4py.PETSc.Viewer.getType petsc4py.PETSc.Viewer-class.html#getType petsc4py.PETSc.Object.refcount petsc4py.PETSc.Object-class.html#refcount petsc4py.PETSc.Viewer.setDrawInfo petsc4py.PETSc.Viewer-class.html#setDrawInfo petsc4py.PETSc.Object.__eq__ petsc4py.PETSc.Object-class.html#__eq__ petsc4py.PETSc.Viewer.getFileName petsc4py.PETSc.Viewer-class.html#getFileName petsc4py.PETSc.Viewer.createASCII petsc4py.PETSc.Viewer-class.html#createASCII petsc4py.PETSc.Object.__le__ petsc4py.PETSc.Object-class.html#__le__ petsc4py.PETSc.ViewerHDF5.getTimestep petsc4py.PETSc.ViewerHDF5-class.html#getTimestep petsc4py.PETSc.Object.getClassName petsc4py.PETSc.Object-class.html#getClassName petsc4py.PETSc.Object.__ge__ petsc4py.PETSc.Object-class.html#__ge__ petsc4py.PETSc.Viewer.Size petsc4py.PETSc.Viewer.Size-class.html petsc4py.PETSc.Viewer.getFileMode petsc4py.PETSc.Viewer-class.html#getFileMode petsc4py.PETSc.Viewer.STDOUT petsc4py.PETSc.Viewer-class.html#STDOUT petsc4py.PETSc.ViewerHDF5.__new__ petsc4py.PETSc.ViewerHDF5-class.html#__new__ petsc4py.PETSc.Viewer.Format petsc4py.PETSc.Viewer.Format-class.html petsc4py.PETSc.Viewer.setFileMode petsc4py.PETSc.Viewer-class.html#setFileMode petsc4py.PETSc.Viewer.destroy petsc4py.PETSc.Viewer-class.html#destroy petsc4py.PETSc.ViewerHDF5.popGroup petsc4py.PETSc.ViewerHDF5-class.html#popGroup petsc4py.PETSc.ViewerHDF5.pushGroup petsc4py.PETSc.ViewerHDF5-class.html#pushGroup petsc4py.PETSc.Object.setAttr petsc4py.PETSc.Object-class.html#setAttr petsc4py.PETSc.Viewer.Mode petsc4py.PETSc.Viewer.Mode-class.html petsc4py.PETSc.Viewer.createMPIIO petsc4py.PETSc.Viewer-class.html#createMPIIO petsc4py.PETSc.ViewerHDF5.setTimestep petsc4py.PETSc.ViewerHDF5-class.html#setTimestep petsc4py.PETSc.Object.getComm petsc4py.PETSc.Object-class.html#getComm petsc4py.PETSc.Viewer.setFileName petsc4py.PETSc.Viewer-class.html#setFileName petsc4py.PETSc.Object.setTabLevel petsc4py.PETSc.Object-class.html#setTabLevel petsc4py.PETSc.Object.klass petsc4py.PETSc.Object-class.html#klass petsc4py.PETSc._DMComposite_access petsc4py.PETSc._DMComposite_access-class.html petsc4py.PETSc._DMComposite_access.__exit__ petsc4py.PETSc._DMComposite_access-class.html#__exit__ petsc4py.PETSc._DMComposite_access.__new__ petsc4py.PETSc._DMComposite_access-class.html#__new__ petsc4py.PETSc._DMComposite_access.__enter__ petsc4py.PETSc._DMComposite_access-class.html#__enter__ petsc4py.PETSc._DMDA_Vec_array petsc4py.PETSc._DMDA_Vec_array-class.html petsc4py.PETSc._DMDA_Vec_array.shape petsc4py.PETSc._DMDA_Vec_array-class.html#shape petsc4py.PETSc._DMDA_Vec_array.array petsc4py.PETSc._DMDA_Vec_array-class.html#array petsc4py.PETSc._DMDA_Vec_array.__new__ petsc4py.PETSc._DMDA_Vec_array-class.html#__new__ petsc4py.PETSc._DMDA_Vec_array.__enter__ petsc4py.PETSc._DMDA_Vec_array-class.html#__enter__ petsc4py.PETSc._DMDA_Vec_array.__exit__ petsc4py.PETSc._DMDA_Vec_array-class.html#__exit__ petsc4py.PETSc._DMDA_Vec_array.__getitem__ petsc4py.PETSc._DMDA_Vec_array-class.html#__getitem__ petsc4py.PETSc._DMDA_Vec_array.strides petsc4py.PETSc._DMDA_Vec_array-class.html#strides petsc4py.PETSc._DMDA_Vec_array.__setitem__ petsc4py.PETSc._DMDA_Vec_array-class.html#__setitem__ petsc4py.PETSc._DMDA_Vec_array.__delitem__ petsc4py.PETSc._DMDA_Vec_array-class.html#__delitem__ petsc4py.PETSc._DMDA_Vec_array.sizes petsc4py.PETSc._DMDA_Vec_array-class.html#sizes petsc4py.PETSc._DMDA_Vec_array.starts petsc4py.PETSc._DMDA_Vec_array-class.html#starts petsc4py.PETSc._IS_buffer petsc4py.PETSc._IS_buffer-class.html petsc4py.PETSc._IS_buffer.__exit__ petsc4py.PETSc._IS_buffer-class.html#__exit__ petsc4py.PETSc._IS_buffer.__new__ petsc4py.PETSc._IS_buffer-class.html#__new__ petsc4py.PETSc._IS_buffer.__enter__ petsc4py.PETSc._IS_buffer-class.html#__enter__ petsc4py.PETSc._IS_buffer.__array_interface__ petsc4py.PETSc._IS_buffer-class.html#__array_interface__ petsc4py.PETSc._Mat_Stencil petsc4py.PETSc._Mat_Stencil-class.html petsc4py.PETSc._Mat_Stencil.index petsc4py.PETSc._Mat_Stencil-class.html#index petsc4py.PETSc._Mat_Stencil.c petsc4py.PETSc._Mat_Stencil-class.html#c petsc4py.PETSc._Mat_Stencil.__new__ petsc4py.PETSc._Mat_Stencil-class.html#__new__ petsc4py.PETSc._Mat_Stencil.i petsc4py.PETSc._Mat_Stencil-class.html#i petsc4py.PETSc._Mat_Stencil.k petsc4py.PETSc._Mat_Stencil-class.html#k petsc4py.PETSc._Mat_Stencil.j petsc4py.PETSc._Mat_Stencil-class.html#j petsc4py.PETSc._Mat_Stencil.field petsc4py.PETSc._Mat_Stencil-class.html#field petsc4py.PETSc._Vec_LocalForm petsc4py.PETSc._Vec_LocalForm-class.html petsc4py.PETSc._Vec_LocalForm.__exit__ petsc4py.PETSc._Vec_LocalForm-class.html#__exit__ petsc4py.PETSc._Vec_LocalForm.__new__ petsc4py.PETSc._Vec_LocalForm-class.html#__new__ petsc4py.PETSc._Vec_LocalForm.__enter__ petsc4py.PETSc._Vec_LocalForm-class.html#__enter__ petsc4py.PETSc._Vec_LocalForm.__init__ petsc4py.PETSc._Vec_LocalForm-class.html#__init__ petsc4py.PETSc._Vec_buffer petsc4py.PETSc._Vec_buffer-class.html petsc4py.PETSc._Vec_buffer.__exit__ petsc4py.PETSc._Vec_buffer-class.html#__exit__ petsc4py.PETSc._Vec_buffer.__new__ petsc4py.PETSc._Vec_buffer-class.html#__new__ petsc4py.PETSc._Vec_buffer.__enter__ petsc4py.PETSc._Vec_buffer-class.html#__enter__ petsc4py.PETSc._Vec_buffer.__array_interface__ petsc4py.PETSc._Vec_buffer-class.html#__array_interface__ petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.IS-class.html0000644000175000001440000012123712711405153023257 0ustar dalcinlusers00000000000000 petsc4py.PETSc.IS
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PETSc for Python
Package petsc4py :: Module PETSc :: Class IS
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Class IS

Nested Classes [hide private]
  Type
Instance Methods [hide private]
 
__enter__(self)
 
__exit__(self, *exc)
a new object with type S, a subtype of T
__new__(S, ...)
 
allGather(self)
 
complement(self, nmin, nmax)
 
copy(self, IS result=None)
 
create(self, comm=None)
 
createBlock(self, bsize, indices, comm=None)
 
createGeneral(self, indices, comm=None)
 
createStride(self, size, first=0, step=0, comm=None)
 
destroy(self)
 
difference(self, IS iset)
 
duplicate(self)
 
embed(self, IS iset, drop)
 
equal(self, IS iset)
 
expand(self, IS iset)
 
getBlockIndices(self)
 
getBlockSize(self)
 
getIndices(self)
 
getInfo(self)
 
getLocalSize(self)
 
getSize(self)
 
getSizes(self)
 
getStride(self)
 
getType(self)
 
invertPermutation(self, nlocal=None)
 
isIdentity(self)
 
isPermutation(self)
 
isSorted(self)
 
load(self, Viewer viewer)
 
setBlockIndices(self, bsize, indices)
 
setBlockSize(self, bs)
 
setIdentity(self)
 
setIndices(self, indices)
 
setPermutation(self)
 
setStride(self, size, first=0, step=1)
 
setType(self, is_type)
 
sort(self)
 
sum(self, IS iset)
 
toGeneral(self)
 
union(self, IS iset)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setFromOptions, setName, setOptionsPrefix, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  __array_interface__
  array
  block_size
  identity
  indices
  local_size
  permutation
  size
  sizes
  sorted

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getType(self)

 
Overrides: Object.getType

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:47 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Scatter-class.html0000644000175000001440000005507412711405156024361 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Scatter
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Scatter
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Class Scatter

Nested Classes [hide private]
  Mode
Instance Methods [hide private]
 
__call__(...) <==> x(...)
a new object with type S, a subtype of T
__new__(S, ...)
 
begin(self, Vec vec_from, Vec vec_to, addv=None, mode=None)
 
copy(self)
 
create(self, Vec vec_from, IS is_from, Vec vec_to, IS is_to)
 
destroy(self)
 
end(self, Vec vec_from, Vec vec_to, addv=None, mode=None)
 
scatter(self, Vec vec_from, Vec vec_to, addv=None, mode=None)
 
scatterBegin(self, Vec vec_from, Vec vec_to, addv=None, mode=None)
 
scatterEnd(self, Vec vec_from, Vec vec_to, addv=None, mode=None)
 
toAll(type cls, Vec vec)
 
toZero(type cls, Vec vec)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, getType, incRef, incrementTabLevel, query, setAttr, setFromOptions, setName, setOptionsPrefix, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
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petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Viewer.Size-class.html0000644000175000001440000002345512711405160025117 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Viewer.Size
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Viewer :: Class Size
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Class Size

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  FULL = -3
  FULL_SIZE = -3
  HALF = -4
  HALF_SIZE = -4
  QUARTER = -6
  QUARTER_SIZE = -6
  THIRD = -5
  THIRD_SIZE = -5
  __qualname__ = 'DrawSize'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:52 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.ViewerHDF5-class.html0000644000175000001440000005115112711405160024607 0ustar dalcinlusers00000000000000 petsc4py.PETSc.ViewerHDF5
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PETSc for Python
Package petsc4py :: Module PETSc :: Class ViewerHDF5
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Class ViewerHDF5

Nested Classes [hide private]

Inherited from Viewer: Format, Mode, Size, Type

Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
create(self, name, mode=None, comm=None)
 
getGroup(self)
 
getTimestep(self)
 
incrementTimestep(self)
 
popGroup(self)
 
pushGroup(self, group)
 
setTimestep(self, timestep)

Inherited from Viewer: ASCII, BINARY, DRAW, STDERR, STDOUT, __call__, clearDraw, createASCII, createBinary, createDraw, createHDF5, createMPIIO, createNetCDF, createVTK, destroy, flush, getFileMode, getFileName, getFormat, getType, popFormat, pushFormat, setDrawInfo, setFileMode, setFileName, setType, view

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setFromOptions, setName, setOptionsPrefix, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

create(self, name, mode=None, comm=None)

 
Overrides: Viewer.create

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PETSc for Python
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petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.LogStage-class.html0000644000175000001440000004063612711405154024455 0ustar dalcinlusers00000000000000 petsc4py.PETSc.LogStage
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PETSc for Python
Package petsc4py :: Module PETSc :: Class LogStage
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Class LogStage

Instance Methods [hide private]
 
__enter__(self)
 
__exit__(self, *exc)
 
__int__() <==> int(x)
 
__long__() <==> long(x)
a new object with type S, a subtype of T
__new__(S, ...)
 
activate(self)
 
deactivate(self)
 
getActive(self)
 
getName(self)
 
getVisible(self)
 
pop(self)
 
push(self)
 
setActive(self, flag)
 
setVisible(self, flag)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  active
  id
  name
  visible

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_dm.png0000644000175000001440000001621412711405152023460 0ustar dalcinlusers00000000000000PNG  IHDR2ڔbKGDAIDATxyTSg'VY"AwjEzjqauk U6T@X֊cPw,n@-YB !99ܼɽ7F" ""*[H=cW@DDaADDZ1,H+sc@d/^ѣGQXXhR b2bXPtQL8eT+sss jN܂Ld ""ҊaADDZ1,H+iŰ *&//~~~ի6m~qjj*$IϗH$HMMr Â999۷/Ν;͛7Xb8 }vX[[W7nʪ'2gA'NSND=o> :6Ν[T*?~\6 [D իAQI&C``zځkkk|GxP󃭭-lll|`͚5x7amm ___:u vvvptt͛ϟcƍӟx"-ZɐJ%ONNF>}:wwxNzz:55o/_x~׮]ѵkW},p7|||~z͛5.LP(_v m۶-ў MJIIIhݺ5%''wC*V^`8v 0`tfRϻtRܹsXr%fΜY &`Ŋ@JJ FL>V˗qe|xnnnH' Ef͚Xf p oSL%K4NgϞaXdI>s,Z{Fz0qDl޼fff˃';/k=rrrmى! ҷ`L<սzK$( 8;;WkZ^3BHO7r%Dǰ ҃+Wf͂!; ҃ݻÇ.`eADDZ1,H+iŰ ""DD Evy?Z-3!pZwAhhh~ Uj&a1,VjԨ&LP]nۻ&2$ ""DDÂbXV ""ҊaADDZ1,H+iŰ ""DDÂbXV ""ҊaADDZ1,H+iŰ ""DDÂbXV ""ҊaADDZ1,H+iŰ ""̍]\pzm3)) v% `ccv*J".%''O>PT.:wW B$BQø%ӧc`Ϟ.L#1%ePǰ:o`Ϟ0ve:ð n(""ҊaADDZ1,H+$..vFOP,1_G//QC[l*cX(oqW.h[ٹp}=<ј/=3]ӘFY.^0,tdݲ%쬬C?:88?0Pc>ј}\"`XUD"Iuto?+PL &I]"Q1,c۶1]\zW\<{c 3FDU° 2333L>xV͛2"1,@'GӽG@Ht423ʼnð "!`!%ܻ7r=Ù qE5 EJ%,7FJ[?AW_׬^=L>s> {obcX-__ߎvvpsuCsKR_)SD"cX@$'<{>%WvLYV ""ҊaADDZ1,H+iŰ ""DDϳ:]??c@deAueg[X3ܲ:Vµ~>}B4m[Sx2"(剨Bnܸ3gѣGqm4hpuuT*T*СCanfTc0,tP<? XXXsθ~:,--1w\|簵oFV?R#GěoiE!Â>>ѣ`mmD7+W ? 77:tPou9M65aAT\EaȐ!hذ!o1m4ܹ 4hK&ӧG>}s㏐_аaCuRH$0,n5bժU/zj]J%&Mg3fG|| `ڵ 6lKOR… ꭎxw777j°MP\ff&0 )w˲m6,YfB@@oG!11rФI 4Hѭ[ OT ]]x^^^h֬"##Ѯ]; /`4o޼Ͻqz#::O>8P>b#Âj6CCq?&O $$-Zt[gϞرcaeeHmV6 pEDH$@*B&᭷BzHÂj vؾ}^̾sd2߿#G_~UjѣG8ur@+++ 6 RFc:aAP-_]7*+77SL\.Ǿ}{]VxzL&5jcXi1f8)S 667nA),,_$znGFo(CqiiidP*G߾} m۰tR̘1;vE_w=>}BVVlmmLL7x`SİePO?cz cǎaׯ:TUXXdVG\\ ynaAePܡC 777Yf^CJJ аaCDFFSNnn.N:HDGG#==]}nL&رc+a_5)9CĘ1cnnnFǏGvvƹF Uv E^zٳg#00[l… ]cǰ{nL6%IIIT(733C^ ޽{܎ډaAPRĉq9K ׬YcRXz!bcc!;wCT*ѣѦMcIզp(dAxx8\]]]Rvڅc„ cG\rEqi|:tPouCq 7nڴi888$bbbݻð6vIz;Ο? [}1vTq .CqAAA9s&F@XXX |2`ffHt%UXZZbbbT*aggxyyA*e˖.ưkZ8B`ݺuX~=,Xy ѣG?~<~W:tÆ 3vI:+JT*AOL$1,jŽ|fm6̛7%Uɋ/ 44| f̘a쒪8y$r9;7oC<==+ue^+EmpcL0.\@PPFehKiݺuXpaR*Ms;;a| P6BL|DFF_۷oΝ1coEƍ]^xgΜѸ > V EMp'N`ҤIҥ > [[[cd0gΜ#Ge} L]}֭[ڈaa bccSN!33xC<X޽{1w\;V~.Mjj*F]^RpVG||<^znݺ:IoB ^/jmůz`e4cxb/)*;"&&F,_\tMB*M6o[ 6mYuo!ɐE 1湹XlڷoƍcǎXf ^x^Ê(ZuۖEBB޽۷oc߾}Ά+>^cǏѻwoXXX ((gϞ{ｇ)S*`Zh˗k+++#WT}.Ҧěo / 0fffk ?j*= ,/Pܼy{#Gge,5ЦM 6 aaaС5J%wwwik֬að{n 0ݺuҥK`|*`ԟlU*?~l䊪]ڼt~7ٳɸv 9pqq]l.KM1?|06nWWWX[[ _} ,ecsETTtoookl:t&MҘ/44-*5kg'O`̙-[ޔH$ػw/v kkklڴ GѼys|sȑ#ܹ3lllpB|Rkٳ'5j:`mvvv[[[iWuA6\\~]=zkת?~wĘ1cDvvعs =z$ F!]& 6;vw{"77WݦB"7o'N7o)))UoiܽN\tiSRۋ;w !Xj޽{k/2gMNN999";;[ &} !J孻bƌ޽{VO:-߄Ӣ{aÆC%d";;[߯(5M9\aP(Ŋ+B dzT*իWL\|Y=v_P5%%Ec#++Kԯ__|BT J%rrrDaaK.ݻ111ť}]M $PϟĥK*\o[]R)DϞ=tQâc."))I_^Ch+Pe ~uVPɩtooo@Q&Z˖-akk_sϝ;~ٳg> 5pvv۷.W\tUױcG]t۷e˖8uwww>}BIOOoF]ti((($ ubWTUWP@!^zX8;;:oyn-0{l\r}UvpA駟"%%+W_Wyޯ^O1B۷c%}<,--շSBP 99٠\ 1(kUT`|w刈r@cnii ___L<QQQql2L2BC}Vek<~ " Dž"==]L4InZ4mT_k%O.Zj%ŋKmEv-ڶm+Ă GPPprr 4]tGBh/꾳/Zl)Zj%fϞ-twS=fu"mΙ3G1D=*J899˗ܦ|[>".k׿%z%^z%",,LW*ELǼ@]VS4nXkN,_\/505]ebX)E]bDDT;0, 2s1vDD&a;v0vDD&aADDZ1,H+iŰ ""zw߭:1h CSr֭j'11kT׸sKW]vm M4ktj GGGx{{{#;;Nf OOOdq[_%FDD 1 ""ҊaADDZ1,Hi+IENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.DMShell-class.html0000644000175000001440000010332612711405153024233 0ustar dalcinlusers00000000000000 petsc4py.PETSc.DMShell
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PETSc for Python
Package petsc4py :: Module PETSc :: Class DMShell
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Class DMShell

Nested Classes [hide private]

Inherited from DM: BoundaryType, Type

Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
create(self, comm=None)
 
setCoarsen(self, coarsen, args=None, kargs=None)
 
setCreateFieldDecomposition(self, decomp, args=None, kargs=None)
 
setCreateGlobalVector(self, create_gvec, args=None, kargs=None)
 
setCreateInjection(self, create_injection, args=None, kargs=None)
 
setCreateInterpolation(self, create_interpolation, args=None, kargs=None)
 
setCreateLocalVector(self, create_lvec, args=None, kargs=None)
 
setCreateMatrix(self, create_matrix, args=None, kargs=None)
 
setCreateSubDM(self, create_subdm, args=None, kargs=None)
 
setGlobalToLocal(self, begin, end, begin_args=None, begin_kargs=None, end_args=None, end_kargs=None)
 
setGlobalToLocalVecScatter(self, Scatter gtol)
 
setGlobalVector(self, Vec gv)
 
setLocalToGlobal(self, begin, end, begin_args=None, begin_kargs=None, end_args=None, end_kargs=None)
 
setLocalToGlobalVecScatter(self, Scatter ltog)
 
setLocalToLocal(self, begin, end, begin_args=None, begin_kargs=None, end_args=None, end_kargs=None)
 
setLocalToLocalVecScatter(self, Scatter ltol)
 
setLocalVector(self, Vec lv)
 
setMatrix(self, Mat mat)
 
setRefine(self, refine, args=None, kargs=None)

Inherited from DM: clearLabelStratum, clearLabelValue, clone, coarsen, coarsenHierarchy, convert, createAggregates, createDefaultSF, createGlobalVec, createGlobalVector, createInjection, createInterpolation, createLabel, createLocalVec, createLocalVector, createMat, createMatrix, destroy, getAppCtx, getBlockSize, getCoordinateDM, getCoordinateSection, getCoordinates, getCoordinatesLocal, getDefaultGlobalSection, getDefaultSF, getDefaultSection, getDimension, getLGMap, getLabelIdIS, getLabelName, getLabelOutput, getLabelSize, getLabelValue, getMatrix, getNumLabels, getPointSF, getStratumIS, getStratumSize, getType, globalToLocal, hasLabel, localToGlobal, localToLocal, refine, refineHierarchy, removeLabel, setAppCtx, setCoordinates, setCoordinatesLocal, setDefaultGlobalSection, setDefaultSection, setDimension, setFromOptions, setLabelOutput, setLabelValue, setMatType, setOptionsPrefix, setPointSF, setType, setUp, setVecType, view

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

create(self, comm=None)

 
Overrides: DM.create

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PETSc for Python
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Modules

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petsc4py.PETSc
petsc4py.lib
[hide private] petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.TS.EquationType-class.html0000644000175000001440000002667312711405157025734 0ustar dalcinlusers00000000000000 petsc4py.PETSc.TS.EquationType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class TS :: Class EquationType
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Class EquationType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  DAE_IMPLICIT_INDEX1 = 1100
  DAE_IMPLICIT_INDEX2 = 1200
  DAE_IMPLICIT_INDEX3 = 1300
  DAE_IMPLICIT_INDEXHI = 1500
  DAE_SEMI_EXPLICIT_INDEX1 = 100
  DAE_SEMI_EXPLICIT_INDEX2 = 200
  DAE_SEMI_EXPLICIT_INDEX3 = 300
  DAE_SEMI_EXPLICIT_INDEXHI = 500
  EXPLICIT = 0
  IMPLICIT = 1000
  ODE_EXPLICIT = 1
  ODE_IMPLICIT = 1001
  UNSPECIFIED = -1
  __qualname__ = 'TSEquationType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
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petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.LGMap-class.html0000644000175000001440000006347212711405154023713 0ustar dalcinlusers00000000000000 petsc4py.PETSc.LGMap
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PETSc for Python
Package petsc4py :: Module PETSc :: Class LGMap
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Class LGMap

Nested Classes [hide private]
  MapType
Instance Methods [hide private]
 
__call__(...) <==> x(...)
a new object with type S, a subtype of T
__new__(S, ...)
 
apply(self, indices, result=None)
 
applyBlock(self, indices, result=None)
 
applyBlockInverse(self, indices, map_type=None)
 
applyIS(self, IS iset)
 
applyInverse(self, indices, map_type=None)
 
create(self, indices, bsize=None, comm=None)
 
createIS(self, IS iset)
 
createSF(self, SF sf, start)
 
destroy(self)
 
getBlockIndices(self)
 
getBlockInfo(self)
 
getBlockSize(self)
 
getIndices(self)
 
getInfo(self)
 
getSize(self)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, getType, incRef, incrementTabLevel, query, setAttr, setFromOptions, setName, setOptionsPrefix, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  block_indices
  block_info
  block_size
  indices
  info
  size

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_size.png0000644000175000001440000000163712711405160024034 0ustar dalcinlusers00000000000000PNG  IHDR;$7BbKGDTIDATh]HSaV-*[^tHYMp``0ԋ$2AJRX`h}(P km7BN'3g_y԰He $I(.ioo(&ie59XReqqaE .Rg'Rg'yxR2̪Ю] N8V]qd[df^ۛBqM ^ҏ|cc22vJjkzYp!4NZ,οrqٰCyv6UU$LT*򔐉0Mä14WD-jVbf)ev¦Aw7h@fVE ~?~Ф(/ZYl6ɊJd2v1Q˔2ceɦJIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.PC.SchurPreType-class.html0000644000175000001440000002206712711405156025646 0ustar dalcinlusers00000000000000 petsc4py.PETSc.PC.SchurPreType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class PC :: Class SchurPreType
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Class SchurPreType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  A11 = 2
  FULL = 4
  SELF = 0
  SELFP = 1
  USER = 3
  __qualname__ = 'PCFieldSplitSchurPreType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.TAO.Type-class.html0000644000175000001440000003115712711405157024314 0ustar dalcinlusers00000000000000 petsc4py.PETSc.TAO.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class TAO :: Class Type
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Class Type

TAO Solver Types
Class Variables [hide private]
  ASFLS = 'asfls'
  ASILS = 'asils'
  BLMVM = 'blmvm'
  BMRM = 'bmrm'
  BQPIP = 'bqpip'
  CG = 'cg'
  GPCG = 'gpcg'
  IPM = 'ipm'
  LCL = 'lcl'
  LMVM = 'lmvm'
  NLS = 'nls'
  NM = 'nm'
  NTL = 'ntl'
  NTR = 'ntr'
  OWLQN = 'owlqn'
  POUNDERS = 'pounders'
  SSFLS = 'ssfls'
  SSILS = 'ssils'
  TEST = 'test'
  TRON = 'tron'
  __qualname__ = 'TAOType'
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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:51 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_problemtyp.png0000644000175000001440000000266312711405157025265 0ustar dalcinlusers00000000000000PNG  IHDRm$ #bKGDhIDATh{LSWVJEuEٜvBjQ8Wc$X|ࠐFNd.1$D0e3-"F۲?NrwA!\p{z!70M|$G"@>3u|0\rΎX,Mmml6AwZ(#ctM5++o+#ԁL@HHI(d5t:@`Mz.UT۽Gl޳XC}~@[GGJv攔 Uf%UUҲzΓ)Fs纹CbqWoTmV1aR5p~cL&tVk[wvvwoMMuY- _X^#2EoS5AA@Ef[ hdId$S$:RV%8 99cڭR%>=}}V!RXZS ܭR y3ZF{{{{tI~~PD~{ߥ ܨW?:hJJ*rsZyyi3 .^Pn.6۳G[UUcqgv~=M!!7of(f([TT}5+[41Z> W#.USryLhÌ**~ڿߛsG ]CN+\Kd7Ӟ/-U8rUryE]-/>ޑ&"M޾X^/N$'s9|~LTVzlzu{Sl(Sގ\5|,h}8yK{H4{6jxX`og7=t {u2J=p.DFk=68ΟOǰg7xp"M$CH@HYgn76F<GnpY,Ѩ3'KNCb#Kv]Ha3:C@HA[|aQIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_pc.png0000644000175000001440000000355712711405155023473 0ustar dalcinlusers00000000000000PNG  IHDRG[!bKGD$IDATxmLSWŚ`"E %覝%0gF[S"%A1a/f`ࠤl0%!`6_ !}Aδ-_r{N˹VBDDG:pa0z'ʕ+xy( X~oya4 {IRo DDrK{/:1Àa0N ̜98u0YVH$IK$X`"ghhVBkk+pmΙΞ= Rw ]]]P(~@())Rd´i)))زe q9lܸYǁvc`` : Jϩ^ČNj!-R122r:t3gt:rP\\CTbϞ=5kxq,cZ=aZƽ{UUUhllDCCL&N8S<[`2^JF444ƍDii)h^}\WWG$Of#?a~ss3) X,ڄ<@DD, -]z{{]FjRSSҥKBݻw-sfϞxfl޼'l6cʕ%KSSSS i(@0)Asvڅo%Á2l߾]HX,N,X>B"\l6 11~fY8x6mڄFX,\|WJB^^VjEkk+ w^QPP!++ gΜݻQTTv(;<<&-A&äj)==d2T*:y$ѫ1(..Z-388HCo>r84::JHѴsNlDDt:iݺu$*n֘491a k+ >}z#$r:::hy:r* cBBs.Àa0J_$nik';a֭0?nnnFEE  L~GNdd$< o4?{2Àa0rp9 \.Àa0rp9 \.Àa0rp9 \.]. W^Z V',^˗/?30?oEDDН;wiI߿Ov=fͿ O4|mUL -mm(p!:ZE¿p9 `x-s+VѣH;WHߏr4nGZr2 =~_UUpB!S,߱H} YYy(ySPAk O>ÁYQQ('|_2.DWlYVpC0dZċ;F }+޿OE Y3 |]YU˖h؇1&%ddb @d9/^OJ6#x56&*X<ɂY0'6w6##JKwUdb s>۰ߟ?/qtDJ)=ri۶awQԄ/^ğOOXeL nbDN~>?~T#Zϡ+  as .Àa0rp9 >.WϑcJ7^zαcv|HIIgkڀ@ bZgc TIENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_convergedr_2.png0000644000175000001440000000372512711405156025446 0ustar dalcinlusers00000000000000PNG  IHDR$;/.bKGDIDAThPSWo !i*.HR ̪T@bpM,hFMĠ`ݬdG_ UKLi~Eax5ؚ2>?;ysyYX^D'Lc޽(j#B///T KNZBҠ;t:HÚ5]"F}kV ³۹H3D'Ded72yY@׮ܰ^:=}}(??￑Ŏ1EQb=]ỏ҃h+)bPJOJZs~^A xХtt4K #^jlD@8r+;)տ٣oP?N r =|F@DEx-g(l,E35ei8;lNOC%͛-o QQ7n f2뚛jf5e ^$FݻsA0,[]kn^OW|ttgmSZ*uuFnFtdM߸ w%v|zzpGy󯴵eC^^Rg)*8W84sʾUQqOutr*)pJ;w.RdfB^yYA}1&Hn.RP&TA샳gl݊oq򏉉o<:t(9/O&+j*GP_)wL zj+$%;;LeD"+NfDFƞ<4PܺFd$P|٣G]5lvCk+gaa^pH$M*z |'*8x%500=!ҏF&IU[D'.qVVwYI 8:SZNPpXlWwLXl/wKZ6=֩SM.)3:3d_?< OOp~F_wڦo +CBk}}{} Z_-k..dbv6m ~􈙚:R_syo$ƒeLY"KJHe"vz9YZX @~z!n2stu򖖯JK!;o=|; ==qX nO8je0nWV@5N'kn-!aL0*wc1Mnر;w$'**N<遪|ȟ<R(q;$=twXODQZGߋ luJ\qC:2 shg7TNT=]355Za0jWXW*Q/j1 3*wc1E'{[ۯ++5Z-/|LĦMPd'{ ѡ$7Cݲehdd^IL:/ 6[߅E%=""2>M+n..q8;{m\>g _}un8uvb➔o i7bXɓ{Ҫ kTƂ/_d뚛]uO8ܹos掰T*d4=IwRRnwu&'H۱cZL߁, I11I #WPܹA-f2->>->~Yh̬߂d :Nvf ‚,,,t:]T'.TTbiiQK#D' petsc4py.PETSc.Mat.Option
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Mat :: Class Option
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Class Option

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  ERROR_LOWER_TRIANGULAR = 13
  GETROW_UPPERTRIANGULAR = 14
  HERMITIAN = 9
  IGNORE_LOWER_TRIANGULAR = 12
  IGNORE_OFF_PROC_ENTRIES = 4
  IGNORE_ZERO_ENTRIES = 7
  KEEP_NONZERO_PATTERN = 6
  NEW_DIAGONALS = 3
  NEW_NONZERO_ALLOCATION_ERR = 19
  NEW_NONZERO_LOCATIONS = 18
  NEW_NONZERO_LOCATION_ERR = 11
  NO_OFF_PROC_ENTRIES = 17
  NO_OFF_PROC_ZERO_ROWS = 16
  ROW_ORIENTED = -1
  SPD = 15
  STRUCTURALLY_SYMMETRIC = 2
  SUBSET_OFF_PROC_ENTRIES = 20
  SYMMETRIC = 1
  SYMMETRY_ETERNAL = 10
  UNUSED_NONZERO_LOCATION_ERR = -2
  USE_HASH_TABLE = 5
  USE_INODES = 8
  __qualname__ = 'MatOption'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for__dmda_vec_.png0000644000175000001440000000342312711405160025115 0ustar dalcinlusers00000000000000PNG  IHDR$ObKGDIDATh{LSWO[ayIq$jڢঈ-bhD69 Vk* dCQNE"(P (DnP X|BWqݕR M's~7wOO.F;T3 #`0c]`<== ,;ac7N)((et ’ ƨ6whxTWtqa 楦~P/>rfh}YfǨi!3kþ}/^UnŐHR|tçOcHgϚ$#7w& z,&+z|^𼴴U 8ԭTR֮66ӮnqUz>č@M`(^~X[ [ t|~oZ4uU(ԽmeeQXr\T@nZFtܘL+6ۇ| %lfP߯1 ޞ{ ϯSb f%ӥ$RRTYe`PcflmXPjjOe0 r4qrӢ23)(-->yNvvLv$;ز=Dw͛v/.pH^^xhN߸sGnܽ;JC8M-x)0mrMh#RsMlO XSXVb"uƍ;gBJ|< Z}Ɩ4qb-G$LDtqQ*!Wj|h?5d2WUQ}}/߾ԬI&C$"-AA_i?N 5Q F7~a4 )+W EG[RBCjLC$ ֱX9őAAH[~Jb0l:=%>T[T!N)1q=L{Ӧhy;D"F/*b @Ƞ \ߢhik؃<4eLh04+rcUb8 gзӧ(tb}YficIENDB`petsc4py-3.7.0/docs/apiref/toc-petsc4py-module.html0000644000175000001440000000256112711405152022770 0ustar dalcinlusers00000000000000 petsc4py

Module petsc4py

Functions

get_include
init

Variables

__credits__
__package__
[hide private] petsc4py-3.7.0/docs/apiref/class_hierarchy_for_type_11.png0000644000175000001440000000156412711405157024351 0ustar dalcinlusers00000000000000PNG  IHDR=$٥bKGD)IDATXc?L2 #dFFƁvv SQ4ڵp KAVBBWw܆^Z&80n,?XcGdE+ թ$wt|ggϬ la*; / ݜ _g``TKy o߸߸qcF9:uv?NNb0wlܿ߿ P'i+Wn~-+Wj5˗`ggdh//4lkʤ$l^..pT}5΂R"?pMP?ɉY090090Y{^cFmZxޓ'6lH x} 7wzH@T+O썍:&(&$4ZV ڎu7}Pu7|yҥ0'/_b ߿_x\E`ffFp87] :yaIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.AO.Type-class.html0000644000175000001440000002235512711405152024163 0ustar dalcinlusers00000000000000 petsc4py.PETSc.AO.Type
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PETSc for Python
Package petsc4py :: Module PETSc :: Class AO :: Class Type
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Class Type

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  ADVANCED = 'advanced'
  BASIC = 'basic'
  MAPPING = 'mapping'
  MEMORYSCALABLE = 'memoryscalable'
  __qualname__ = 'AOType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:46 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_assemblyty.png0000644000175000001440000000275712711405154025265 0ustar dalcinlusers00000000000000PNG  IHDRx$Ji bKGDIDATh}LSW[lZ`*c@QYEqE -bdDfFHPlnHqf5046!T>B~!`?]rq>==9`/A4^0bAڑ# X,f`C'''^ og>>4G `Q٩l^}a?_G|v64b1 "h ۃ-+C|̎n,ӧR!LlF |=f_b8 CBAJ偤$z#Бzd.t ﹹƠ;{{vLD30׾3L<<ʉSGRe֮Z%W*+ׯon޼:2BQf. *,h0uўlvLVQ[_ͩSƏPW'x{&tT|0:tawϜbtij BCӥҗj9bK輱#"b9c/ⲲRLNN:tԔ"VV ~bCYٯmmߖMj*+)*ΥK33;ӧ@V](-ZRښ[Vft˭iltPԴۛo,K+EEܸ@Z-AuuFGc\p޿jFOLNR)PřB1Y55%h 4#Cq&<#!a뮨(ؗU$gPYY :}yii/Sp` Ln}.% m,d鬀ʫW-X [R(:GHd dIcyNo/D,nio'H&`xx9H+h+c# :`*^ uz\<rL Z9t\<2VKǏ5Fg*ҥnnG1Ywp0˱x> ^rsbl`U,V?-c |;..kgDD`Gw7۳qFC&]TEprFFlII9%'T˭[>۸Q9{6Q xcs_DF*R(8,q:?RIP~?O 8YQ!J"MM]5ҌYGGK$lvfb"UW'Wl'֮M;w&m޴6WWdƿo!!AAs{9x޾q"h "h  4+hfL"8fD3*h| C "haʵIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.PartitionerType-class.html0000644000175000001440000002155512711405156026113 0ustar dalcinlusers00000000000000 petsc4py.PETSc.PartitionerType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class PartitionerType
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Class PartitionerType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  CHACO = 'chaco'
  PARMETIS = 'parmetis'
  SHELL = 'shell'
  __qualname__ = 'PartitionerType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_stenciltyp.png0000644000175000001440000000267312711405153025263 0ustar dalcinlusers00000000000000PNG  IHDRe$cQbKGDpIDAThmLSWǟ[$FWʔfq$`VDŽ VDE$ѡL@#eF &Ad@ QQ7 4hmllPѾÝw[%_99ssz/b4bHo[8 _81 Vnh0E"mJKK1&V M-b0ޒwUwwSs3z,9ax/ N׻JIMMSRҐ$A/|Xד.AAlzHޜoV\DLj١3~J+#Gfhtt =└공klhx}Yd{ L3>>Z0L~,ǚU&ܨ`4FdQ̤i B:8( rƯvvŘ5jXns.I$r$=a2TUX1[x$99%KyL+bC'E//:'^ xepa_gw|t)76pABF$աEDrº܋7n|ˤҦSGHJkk+bi^^Bq(/UNTYUEE?/_N7#rk1uq/w ϟDyyVJlA \Aqd{-GΞ..A:w<,% ͛PXUÎo;;C[J*+H܋Ohhr H۸qoNN(20pH]]39)hD(j3cC"nkn?3GI{~" :Ln0dFkO7Sz ex#sg/^,pa15˷?xm z^&rp5e(/b[;22` J?LZeEE#v۝"YN?pz4 ʕ_n% \y߿`n.]p>=_l,qrZbp_ BVD A8Ab∽FGi7iA^^m!V;ь6(iSV&005:rIf@Lw;j.w?;+~g>-ʕJzHQ&{>KjjV'%@qqqxx8ǧ*U~Yư1nueaddK.ĒS^j4hGϥKC3M!-m4k!>1~ܼz{Uw H$`Pj4JfTlll/gCA/| msKIENDB`petsc4py-3.7.0/docs/apiref/crarr.png0000644000175000001440000000052412711405152020075 0ustar dalcinlusers00000000000000PNG  IHDR eE,tEXtCreation TimeTue 22 Aug 2006 00:43:10 -0500` XtIME)} pHYsnu>gAMA aEPLTEðf4sW ЊrD`@bCܖX{`,lNo@xdE螊dƴ~TwvtRNS@fMIDATxc`@0&+(;; /EXؑ? n  b;'+Y#(r<"IENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.Options-class.html0000644000175000001440000005324312711405155024402 0ustar dalcinlusers00000000000000 petsc4py.PETSc.Options
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PETSc for Python
Package petsc4py :: Module PETSc :: Class Options
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Class Options

Options(prefix=None)
Instance Methods [hide private]
 
__contains__(y)
y in x
 
__delitem__(y)
del x[y]
 
__getitem__(y)
x[y]
 
__init__(prefix=None)
x.__init__(...) initializes x; see help(type(x)) for signature
a new object with type S, a subtype of T
__new__(S, ...)
 
__setitem__(i, y)
x[i]=y
 
clear(self)
 
create(self)
 
delValue(self, name)
 
destroy(self)
 
getAll(self)
 
getBool(self, name, default=None)
 
getInt(self, name, default=None)
 
getReal(self, name, default=None)
 
getScalar(self, name, default=None)
 
getString(self, name, default=None)
 
hasName(self, name)
 
prefixPop(self)
 
prefixPush(self, prefix)
 
setFromOptions(self)
 
setValue(self, name, value)
 
view(self, Viewer viewer=None)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  prefix

Inherited from object: __class__

Method Details [hide private]

__init__(prefix=None)
(Constructor)

 
x.__init__(...) initializes x; see help(type(x)) for signature
Overrides: object.__init__

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:49 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_viewerhdf5.png0000644000175000001440000000621112711405160025123 0ustar dalcinlusers00000000000000PNG  IHDRl]bKGD >IDATxmPO:@d1"EArU̠ʵ|jcڪuiBX2n46 SBK(ǎiLIxYsɏݳ}=ɁFL -H-R** ^d @EPNjj*\z>)) $ HJJ DDDDhVZot:PGGF3O:::(R(ѣ TZTT\PPPZZ&K={bM~?3Ʉ`'ÇY,X,7oBgӦM+W|^hlBBH.{yy%VWã*yFTbaaaOOOTTTMMB|rhhFF!77C*8p_6.PPPT*bbbΜ9}޹sΝ;JҐTum"ǏsssW\ȑAi[VVVdWWa¨MHOOg0...;wh4CCCprrj VNc~.4UWeFS(˖-0Ywd!;;9^wx-X>(&=X"X"X"X"0wy敕~652}HB!B(;;{:*F#q% MKKKKKKKKKKKKKKKKKKKKKKKKK`INN/9oFLS'Ob%i4ڵkgtsT*D"4 ˧^m"X"X"X"TH<}… GGG )Axyy:uj\THLJJ~!ER%&&:;;SôBD6e<2""ݝd;vD@p%)))ى'm #=gcco>^g0c!+ŋ/nhh(؈joo &y'mb!XWWdCCCc!:qDqq1ԟz,{!ѣ\.L4|Җ&:>22s;;;Z]\\+b25@XXQQfu:ݚ5k>2XlvcccPPD" gΜYd"{ݾ8FSZZo|>_UU%\H$NSФ_@l۶`DGGRĽ{&&&vvvfffqE:Dt:Pܼgh"L7| )l>i AG!BѼ 77/ח8ۘ{m_,,,,,,H$\|Am&N?jzzz„2xzzN&%%%%%%%%%%%%%%%%%%%%%%%%%0… j`ɍ7Baaa3ȟh4@y?m.a_{9ˏ0DW$ X"X"X"K<]V3%&ԅ *m:g q8*x)4YjqNT`z {뭭W)-?D6?=*2+~~tTT[Zz%gGG&E>|97 ^{Z,RqAbemmD`;"@X Z!(hCFݻM#W*oAd~iD"+R,Nٴ !d|9ku]PN*ېreѼaJR&eI'wo|N΄=6V>'ƭ_y򤴺\ Lggŕ+LFdk$ncc+~~ܐDR~xEt;[ki ^h|L KJ:jcc`|+eD{͑Yܐa!!*]]mry̫)/G߯  믽ݽ'(bjuo=9>;ރ9۷O`YvqqJ& =q"36V=0=#{8:8NIرǧ(+ ! {PBhݪU#Z2fXqgt.8Mֶ ػ72$+XSdf|_MU7wKKKKK`΀HD}(sUwy"Ky0sQϜ===j,,FEDDM|wK蒡 IENDB`petsc4py-3.7.0/docs/apiref/class_hierarchy_for_type_12.png0000644000175000001440000000156412711405160024344 0ustar dalcinlusers00000000000000PNG  IHDR=$٥bKGD)IDATXc?L2 #dFFƁvv SQ4ڵp KAVBBWw܆^Z&80n,?XcGdE+ թ$wt|ggϬ la*; / ݜ _g``TKy o߸߸qcF9:uv?NNb0wlܿ߿ P'i+Wn~-+Wj5˗`ggdh//4lkʤ$l^..pT}5΂R"?pMP?ɉY090090Y{^cFmZxޓ'6lH x} 7wzH@T+O썍:&(&$4ZV ڎu7}Pu7|yҥ0'/_b ߿_x\E`ffFp87] :yaIENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.DM.BoundaryType-class.html0000644000175000001440000002206712711405152025670 0ustar dalcinlusers00000000000000 petsc4py.PETSc.DM.BoundaryType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class DM :: Class BoundaryType
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Class BoundaryType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  GHOSTED = 1
  MIRROR = 2
  NONE = 0
  PERIODIC = 3
  TWIST = 4
  __qualname__ = 'DMBoundaryType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:46 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.LogClass-class.html0000644000175000001440000003173412711405154024456 0ustar dalcinlusers00000000000000 petsc4py.PETSc.LogClass
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PETSc for Python
Package petsc4py :: Module PETSc :: Class LogClass
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Class LogClass

Instance Methods [hide private]
 
__int__() <==> int(x)
 
__long__() <==> long(x)
a new object with type S, a subtype of T
__new__(S, ...)
 
activate(self)
 
deactivate(self)
 
getActive(self)
 
getName(self)
 
setActive(self, flag)

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]
  active
  id
  name

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:48 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.SF-class.html0000644000175000001440000005516112711405156023261 0ustar dalcinlusers00000000000000 petsc4py.PETSc.SF
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PETSc for Python
Package petsc4py :: Module PETSc :: Class SF
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Class SF

Nested Classes [hide private]
  Type
Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
create(self, comm=None)
 
createInverse(self)
 
destroy(self)
 
getGraph(self)
 
getMulti(self)
 
getType(self)
 
reset(self)
 
setFromOptions(self)
 
setGraph(self, nroots, nleaves, local, remote)
 
setRankOrder(self, flag)
 
setType(self, sf_type)
 
setUp(self)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setOptionsPrefix, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getType(self)

 
Overrides: Object.getType

setFromOptions(self)

 
Overrides: Object.setFromOptions

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:50 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.PC.GASMType-class.html0000644000175000001440000002142112711405155024632 0ustar dalcinlusers00000000000000 petsc4py.PETSc.PC.GASMType
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PETSc for Python
Package petsc4py :: Module PETSc :: Class PC :: Class GASMType
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[frames] | no frames]

Class GASMType

Instance Methods [hide private]

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]
  BASIC = 3
  INTERPOLATE = 2
  NONE = 0
  RESTRICT = 1
  __qualname__ = 'PCGASMType'
Properties [hide private]

Inherited from object: __class__

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:49 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/apiref/class_hierarchy_for_gasmtype.png0000644000175000001440000000327712711405155024721 0ustar dalcinlusers00000000000000PNG  IHDRe$cQbKGDtIDATh{LSWmE|uQ -5ԁp J@(hFn3Q0( >C" dS HA@kcFudqwz9^V= K0E ^ђh_: ;;;\NH^t~2BdF+&s+rSj8~ϚU}R*]NHd/@j^/j託D*]͍qqɠ[hlT(x<#׽{_  l|i. 4 {[[u_gt XXTvɓ"#owtZm@`d lvl. ?%&!3޻O]CުުKVU}gcC.zmuvpݴeoϲJL L/,$:lkkOMJR~&-6iLsSlvVbZ˝;T$"'ϟw3Ս ffL33sSS@uw?+U^SF> XnmD, l.c?my51))yߏl@@xCJBbIG ҘùqNLFð^k*!3sGBfkJ)5UGOJB5r%|'u$-SWq<+)^@K_nhx0\nyMJ閖،ȕS\|*;"+ h<|ϣGU74C5wA5ǸYer9 uns{;rcKK99=z,12xIe%sŰƽ?WmsGϜ#fkm9[cb> 廓LG[8ŋTsbN8а 5bV,~TWGt(Tj; ء/8:nZtòeI=x{VVjc"QaAϝɓWy&7''Z977Ϗliv[6dg A8%mH^Xuk]}aᵖФϞ|;}: 8CNiL++4SS||6dg;lvZl/\1ӃpBq=X^ꚼt)=ؘdtȝF~Fboϻw92V,aKE PRRr`ĉ|\qxuyNX`tš>OGń 6nLWkE ^EwoE5L.C0`п~@~^/j߃~)IENDB`petsc4py-3.7.0/docs/apiref/petsc4py.PETSc.DM-class.html0000644000175000001440000015330412711405152023243 0ustar dalcinlusers00000000000000 petsc4py.PETSc.DM
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PETSc for Python
Package petsc4py :: Module PETSc :: Class DM
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[frames] | no frames]

Class DM

Nested Classes [hide private]
  BoundaryType
  Type
Instance Methods [hide private]
a new object with type S, a subtype of T
__new__(S, ...)
 
clearLabelStratum(self, name, value)
 
clearLabelValue(self, name, point, value)
 
clone(self)
 
coarsen(self, comm=None)
 
coarsenHierarchy(self, nlevels)
 
convert(self, dm_type)
 
create(self, comm=None)
 
createAggregates(self, DM dm)
 
createDefaultSF(self, Section localsec, Section globalsec)
 
createGlobalVec(self)
 
createGlobalVector(self)
 
createInjection(self, DM dm)
 
createInterpolation(self, DM dm)
 
createLabel(self, name)
 
createLocalVec(self)
 
createLocalVector(self)
 
createMat(self)
 
createMatrix(self)
 
destroy(self)
 
getAppCtx(self)
 
getBlockSize(self)
 
getCoordinateDM(self)
 
getCoordinateSection(self)
 
getCoordinates(self)
 
getCoordinatesLocal(self)
 
getDefaultGlobalSection(self)
 
getDefaultSF(self)
 
getDefaultSection(self)
 
getDimension(self)
 
getLGMap(self)
 
getLabelIdIS(self, name)
 
getLabelName(self, index)
 
getLabelOutput(self, name)
 
getLabelSize(self, name)
 
getLabelValue(self, name, point)
 
getMatrix(self)
 
getNumLabels(self)
 
getPointSF(self)
 
getStratumIS(self, name, value)
 
getStratumSize(self, name, value)
 
getType(self)
 
globalToLocal(self, Vec vg, Vec vl, addv=None)
 
hasLabel(self, name)
 
localToGlobal(self, Vec vl, Vec vg, addv=None)
 
localToLocal(self, Vec vl, Vec vlg, addv=None)
 
refine(self, comm=None)
 
refineHierarchy(self, nlevels)
 
removeLabel(self, name)
 
setAppCtx(self, appctx)
 
setCoordinates(self, Vec c)
 
setCoordinatesLocal(self, Vec c)
 
setDefaultGlobalSection(self, Section sec)
 
setDefaultSection(self, Section sec)
 
setDimension(self, dim)
 
setFromOptions(self)
 
setLabelOutput(self, name, output)
 
setLabelValue(self, name, point, value)
 
setMatType(self, mat_type)
Set matrix type to be used by DM.createMat
 
setOptionsPrefix(self, prefix)
 
setPointSF(self, SF sf)
 
setType(self, dm_type)
 
setUp(self)
 
setVecType(self, vec_type)
 
view(self, Viewer viewer=None)

Inherited from Object: __copy__, __deepcopy__, __eq__, __ge__, __gt__, __le__, __lt__, __ne__, __nonzero__, compose, decRef, getAttr, getClassId, getClassName, getComm, getDict, getName, getOptionsPrefix, getRefCount, getTabLevel, incRef, incrementTabLevel, query, setAttr, setName, setTabLevel, stateIncrease

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from Object: classid, comm, fortran, handle, klass, name, prefix, refcount, type

Inherited from object: __class__

Method Details [hide private]

__new__(S, ...)

 
Returns: a new object with type S, a subtype of T
Overrides: object.__new__

destroy(self)

 
Overrides: Object.destroy

getType(self)

 
Overrides: Object.getType

setFromOptions(self)

 
Overrides: Object.setFromOptions

setOptionsPrefix(self, prefix)

 
Overrides: Object.setOptionsPrefix

view(self, Viewer viewer=None)

 
Overrides: Object.view

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PETSc for Python
Generated by Epydoc 3.0.1 on Sun May 1 16:53:46 2016 http://epydoc.sourceforge.net
petsc4py-3.7.0/docs/source/0000755000175000001440000000000012711405164016312 5ustar dalcinlusers00000000000000petsc4py-3.7.0/docs/source/sphinxfix.sty0000644000175000001440000000106012711377604021077 0ustar dalcinlusers00000000000000\setcounter{tocdepth}{2} \pagenumbering{arabic} \makeatletter \renewcommand{\theindex}{ \cleardoublepage \phantomsection \py@OldTheindex \addcontentsline{toc}{section}{\indexname} } \makeatother \makeatletter \renewcommand{\thebibliography}[1]{ \cleardoublepage \phantomsection \py@OldThebibliography{1} \addcontentsline{toc}{section}{\bibname} } \makeatother \makeatletter \renewcommand{\tableofcontents}{ \begingroup \parskip = 0mm \py@OldTableofcontents \endgroup \vfill \rule{\textwidth}{1pt} \newpage } \makeatother petsc4py-3.7.0/docs/source/manual.rst0000644000175000001440000000020012711377604020320 0ustar dalcinlusers00000000000000================ PETSc for Python ================ .. include:: abstract.txt .. include:: toctree.txt .. include:: links.txt petsc4py-3.7.0/docs/source/tutorial.rst0000644000175000001440000000010312711377604020710 0ustar dalcinlusers00000000000000Tutorial ======== XXX To be written ... Any contribution welcome! petsc4py-3.7.0/docs/source/Makefile0000644000175000001440000001425212711377604017765 0ustar dalcinlusers00000000000000# Makefile for Sphinx documentation # # You can set these variables from the command line. SPHINXOPTS = SPHINXBUILD = sphinx-build PAPER = BUILDDIR = _build # Internal variables. PAPEROPT_a4 = -D latex_paper_size=a4 PAPEROPT_letter = -D latex_paper_size=letter ALLSPHINXOPTS = -d $(BUILDDIR)/doctrees $(PAPEROPT_$(PAPER)) $(SPHINXOPTS) . # the i18n builder cannot share the environment and doctrees with the others I18NSPHINXOPTS = $(PAPEROPT_$(PAPER)) $(SPHINXOPTS) . .PHONY: help clean html dirhtml singlehtml pickle json htmlhelp qthelp devhelp epub latex latexpdf text man changes linkcheck doctest gettext help: @echo "Please use \`make ' where is one of" @echo " html to make standalone HTML files" @echo " dirhtml to make HTML files named index.html in directories" @echo " singlehtml to make a single large HTML file" @echo " pickle to make pickle files" @echo " json to make JSON files" @echo " htmlhelp to make HTML files and a HTML help project" @echo " qthelp to make HTML files and a qthelp project" @echo " devhelp to make HTML files and a Devhelp project" @echo " epub to make an epub" @echo " latex to make LaTeX files, you can set PAPER=a4 or PAPER=letter" @echo " latexpdf to make LaTeX files and run them through pdflatex" @echo " latexpdfja to make LaTeX files and run them through platex/dvipdfmx" @echo " text to make text files" @echo " man to make manual pages" @echo " texinfo to make Texinfo files" @echo " info to make Texinfo files and run them through makeinfo" @echo " gettext to make PO message catalogs" @echo " changes to make an overview of all changed/added/deprecated items" @echo " xml to make Docutils-native XML files" @echo " pseudoxml to make pseudoxml-XML files for display purposes" @echo " linkcheck to check all external links for integrity" @echo " doctest to run all doctests embedded in the documentation (if enabled)" clean: rm -rf $(BUILDDIR)/* html: $(SPHINXBUILD) -b html $(ALLSPHINXOPTS) $(BUILDDIR)/html @echo @echo "Build finished. The HTML pages are in $(BUILDDIR)/html." dirhtml: $(SPHINXBUILD) -b dirhtml $(ALLSPHINXOPTS) $(BUILDDIR)/dirhtml @echo @echo "Build finished. The HTML pages are in $(BUILDDIR)/dirhtml." singlehtml: $(SPHINXBUILD) -b singlehtml $(ALLSPHINXOPTS) $(BUILDDIR)/singlehtml @echo @echo "Build finished. The HTML page is in $(BUILDDIR)/singlehtml." pickle: $(SPHINXBUILD) -b pickle $(ALLSPHINXOPTS) $(BUILDDIR)/pickle @echo @echo "Build finished; now you can process the pickle files." json: $(SPHINXBUILD) -b json $(ALLSPHINXOPTS) $(BUILDDIR)/json @echo @echo "Build finished; now you can process the JSON files." htmlhelp: $(SPHINXBUILD) -b htmlhelp $(ALLSPHINXOPTS) $(BUILDDIR)/htmlhelp @echo @echo "Build finished; now you can run HTML Help Workshop with the" \ ".hhp project file in $(BUILDDIR)/htmlhelp." qthelp: $(SPHINXBUILD) -b qthelp $(ALLSPHINXOPTS) $(BUILDDIR)/qthelp @echo @echo "Build finished; now you can run "qcollectiongenerator" with the" \ ".qhcp project file in $(BUILDDIR)/qthelp, like this:" @echo "# qcollectiongenerator $(BUILDDIR)/qthelp/petsc4py.qhcp" @echo "To view the help file:" @echo "# assistant -collectionFile $(BUILDDIR)/qthelp/petsc4py.qhc" devhelp: $(SPHINXBUILD) -b devhelp $(ALLSPHINXOPTS) $(BUILDDIR)/devhelp @echo @echo "Build finished." @echo "To view the help file:" @echo "# mkdir -p $$HOME/.local/share/devhelp/petsc4py" @echo "# ln -s $(BUILDDIR)/devhelp $$HOME/.local/share/devhelp/petsc4py" @echo "# devhelp" epub: $(SPHINXBUILD) -b epub $(ALLSPHINXOPTS) $(BUILDDIR)/epub @echo @echo "Build finished. The epub file is in $(BUILDDIR)/epub." latex: $(SPHINXBUILD) -b latex $(ALLSPHINXOPTS) $(BUILDDIR)/latex @echo @echo "Build finished; the LaTeX files are in $(BUILDDIR)/latex." @echo "Run \`make' in that directory to run these through (pdf)latex" \ "(use \`make latexpdf' here to do that automatically)." latexpdf: $(SPHINXBUILD) -b latex $(ALLSPHINXOPTS) $(BUILDDIR)/latex @echo "Running LaTeX files through pdflatex..." $(MAKE) -C $(BUILDDIR)/latex all-pdf @echo "pdflatex finished; the PDF files are in $(BUILDDIR)/latex." latexpdfja: $(SPHINXBUILD) -b latex $(ALLSPHINXOPTS) $(BUILDDIR)/latex @echo "Running LaTeX files through platex and dvipdfmx..." $(MAKE) -C $(BUILDDIR)/latex all-pdf-ja @echo "pdflatex finished; the PDF files are in $(BUILDDIR)/latex." text: $(SPHINXBUILD) -b text $(ALLSPHINXOPTS) $(BUILDDIR)/text @echo @echo "Build finished. The text files are in $(BUILDDIR)/text." man: $(SPHINXBUILD) -b man $(ALLSPHINXOPTS) $(BUILDDIR)/man @echo @echo "Build finished. The manual pages are in $(BUILDDIR)/man." texinfo: $(SPHINXBUILD) -b texinfo $(ALLSPHINXOPTS) $(BUILDDIR)/texinfo @echo @echo "Build finished. The Texinfo files are in $(BUILDDIR)/texinfo." @echo "Run \`make' in that directory to run these through makeinfo" \ "(use \`make info' here to do that automatically)." info: $(SPHINXBUILD) -b texinfo $(ALLSPHINXOPTS) $(BUILDDIR)/texinfo @echo "Running Texinfo files through makeinfo..." make -C $(BUILDDIR)/texinfo info @echo "makeinfo finished; the Info files are in $(BUILDDIR)/texinfo." gettext: $(SPHINXBUILD) -b gettext $(I18NSPHINXOPTS) $(BUILDDIR)/locale @echo @echo "Build finished. The message catalogs are in $(BUILDDIR)/locale." changes: $(SPHINXBUILD) -b changes $(ALLSPHINXOPTS) $(BUILDDIR)/changes @echo @echo "The overview file is in $(BUILDDIR)/changes." linkcheck: $(SPHINXBUILD) -b linkcheck $(ALLSPHINXOPTS) $(BUILDDIR)/linkcheck @echo @echo "Link check complete; look for any errors in the above output " \ "or in $(BUILDDIR)/linkcheck/output.txt." doctest: $(SPHINXBUILD) -b doctest $(ALLSPHINXOPTS) $(BUILDDIR)/doctest @echo "Testing of doctests in the sources finished, look at the " \ "results in $(BUILDDIR)/doctest/output.txt." xml: $(SPHINXBUILD) -b xml $(ALLSPHINXOPTS) $(BUILDDIR)/xml @echo @echo "Build finished. The XML files are in $(BUILDDIR)/xml." pseudoxml: $(SPHINXBUILD) -b pseudoxml $(ALLSPHINXOPTS) $(BUILDDIR)/pseudoxml @echo @echo "Build finished. The pseudo-XML files are in $(BUILDDIR)/pseudoxml." petsc4py-3.7.0/docs/source/install.rst0000644000175000001440000000713612711377604020530 0ustar dalcinlusers00000000000000Installation ============ Using **pip** or **easy_install** --------------------------------- You can use :program:`pip` to install :mod:`petsc4py` and its dependencies (:mod:`mpi4py` is optional but highly recommended):: $ pip install [--user] numpy mpi4py $ pip install [--user] petsc petsc4py Alternatively, you can use :program:`easy_install` (deprecated):: $ easy_install petsc4py If you already have a working PETSc installation, set environment variables :envvar:`PETSC_DIR` and :envvar:`PETSC_ARCH` to appropriate values and next use :program:`pip`:: $ export PETSC_DIR=/path/to/petsc $ export PETSC_ARCH=arch-linux2-c-opt $ pip install petsc4py Using **distutils** ------------------- Requirements ^^^^^^^^^^^^ You need to have the following software properly installed in order to build *PETSc for Python*: * Any MPI_ implementation [#]_ (e.g., MPICH_ or `Open MPI`_), built with shared libraries. * A matching version of PETSc_ built with shared libraries. * NumPy_ package. .. [#] Unless you have appropiatelly configured and built PETSc without MPI (configure option :option:`--with-mpi=0`). .. [#] You may need to use a parallelized version of the Python interpreter with some MPI-1 implementations (e.g. MPICH1). .. include:: links.txt Downloading ^^^^^^^^^^^ The *PETSc for Python* package is available for download at the project website generously hosted by Bitbucket. You can use :program:`curl` or :program:`wget` to get a release tarball. * Using :program:`curl`:: $ curl -O https://bitbucket.org/petsc/petsc4py/petsc4py-X.Y.tar.gz * Using :program:`wget`:: $ wget https://bitbucket.org/petsc/petsc4py/petsc4py-X.Y.tar.gz Building ^^^^^^^^ After unpacking the release tarball:: $ tar -zxf petsc4py-X.Y.tar.gz $ cd petsc4py-X.Y the distribution is ready for building. .. note:: **Mac OS X** users employing a Python distribution built with **universal binaries** may need to set the environment variables :envvar:`MACOSX_DEPLOYMENT_TARGET`, :envvar:`SDKROOT`, and :envvar:`ARCHFLAGS` to appropriate values. As an example, assume your Mac is running **Snow Leopard** on a **64-bit Intel** processor and you want to override the hard-wired cross-development SDK in Python configuration, your environment should be modified like this:: $ export MACOSX_DEPLOYMENT_TARGET=10.6 $ export SDKROOT=/ $ export ARCHFLAGS='-arch x86_64' Some environment configuration is needed to inform the location of PETSc. You can set (using :command:`setenv`, :command:`export` or what applies to you shell or system) the environment variables :envvar:`PETSC_DIR`, and :envvar:`PETSC_ARCH` indicating where you have built/installed PETSc:: $ export PETSC_DIR=/usr/local/petsc $ export PETSC_ARCH=arch-linux2-c-opt Alternatively, you can edit the file :file:`setup.cfg` and provide the required information below the ``[config]`` section:: [config] petsc_dir = /usr/local/petsc petsc_arch = arch-linux2-c-opt ... Finally, you can build the distribution by typing:: $ python setup.py build Installing ^^^^^^^^^^ After building, the distribution is ready for installation. If you have root privileges (either by log-in as the root user of by using :command:`sudo`) and you want to install *PETSc for Python* in your system for all users, just do:: $ python setup.py install The previous steps will install the :mod:`petsc4py` package at standard location :file:`{prefix}/lib/python{X}.{X}/site-packages`. If you do not have root privileges or you want to install *PETSc for Python* for your private use, just do:: $ python setup.py install --user petsc4py-3.7.0/docs/source/abstract.txt0000644000175000001440000000154312711377604020670 0ustar dalcinlusers00000000000000.. topic:: Abstract This document describes petsc4py_, a Python_ port to the PETSc_ libraries. PETSc_ (the Portable, Extensible Toolkit for Scientific Computation) is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI_ standard for all message-passing communication. This package provides an important subset of PETSc functionalities and uses NumPy_ to efficiently manage input and output of array data. A *good friend* of petsc4py is: * mpi4py_: Python bindings for MPI_, the *Message Passing Interface*. Other projects depends on petsc4py: * slepc4py_: Python bindings for SLEPc_, the *Scalable Library for Eigenvalue Problem Computations*. .. Local Variables: .. mode: rst .. End: petsc4py-3.7.0/docs/source/conf.py0000644000175000001440000002442012711377604017622 0ustar dalcinlusers00000000000000# -*- coding: utf-8 -*- # # PETSc for Python documentation build configuration file, created by # sphinx-quickstart on Sun Aug 17 12:57:45 2014. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. # # All configuration values have a default; values that are commented out # serve to show the default. import sys import os try: from petsc4py import __version__ as petsc4py_version except: petsc4py_version = 'X.X.X' # If extensions (or modules to document with autodoc) are in another directory, # add these directories to sys.path here. If the directory is relative to the # documentation root, use os.path.abspath to make it absolute, like shown here. #sys.path.insert(0, os.path.abspath('.')) # -- General configuration ------------------------------------------------ # If your documentation needs a minimal Sphinx version, state it here. #needs_sphinx = '1.0' # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [] # Add any paths that contain templates here, relative to this directory. #templates_path = ['_templates'] templates_path = [] # The suffix of source filenames. source_suffix = '.rst' # The encoding of source files. #source_encoding = 'utf-8-sig' # The master toctree document. master_doc = 'index' # General information about the project. project = u'PETSc for Python' copyright = u'2016, Lisandro Dalcin' # The version info for the project you're documenting, acts as replacement for # |version| and |release|, also used in various other places throughout the # built documents. # # The short X.Y version. version = petsc4py_version[:3] # The full version, including alpha/beta/rc tags. release = petsc4py_version # The language for content autogenerated by Sphinx. Refer to documentation # for a list of supported languages. #language = None # There are two options for replacing |today|: either, you set today to some # non-false value, then it is used: #today = '' # Else, today_fmt is used as the format for a strftime call. #today_fmt = '%B %d, %Y' # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. exclude_patterns = ['_build'] # The reST default role (used for this markup: `text`) to use for all # documents. #default_role = None # If true, '()' will be appended to :func: etc. cross-reference text. #add_function_parentheses = True # If true, the current module name will be prepended to all description # unit titles (such as .. function::). #add_module_names = True # If true, sectionauthor and moduleauthor directives will be shown in the # output. They are ignored by default. #show_authors = False # The name of the Pygments (syntax highlighting) style to use. pygments_style = 'sphinx' # A list of ignored prefixes for module index sorting. #modindex_common_prefix = [] # If true, keep warnings as "system message" paragraphs in the built documents. #keep_warnings = False # -- Options for HTML output --------------------------------------------------- # The theme to use for HTML and HTML Help pages. See the documentation for # a list of builtin themes. html_theme = 'default' # Theme options are theme-specific and customize the look and feel of a theme # further. For a list of options available for each theme, see the # documentation. #html_theme_options = {} # Add any paths that contain custom themes here, relative to this directory. #html_theme_path = [] # The name for this set of Sphinx documents. If None, it defaults to # " v documentation". #html_title = None # A shorter title for the navigation bar. Default is the same as html_title. #html_short_title = None # The name of an image file (relative to this directory) to place at the top # of the sidebar. #html_logo = None # The name of an image file (within the static path) to use as favicon of the # docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32 # pixels large. #html_favicon = None # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css". #html_static_path = ['_static'] html_static_path = [] # Add any extra paths that contain custom files (such as robots.txt or # .htaccess) here, relative to this directory. These files are copied # directly to the root of the documentation. #html_extra_path = [] # If not '', a 'Last updated on:' timestamp is inserted at every page bottom, # using the given strftime format. #html_last_updated_fmt = '%b %d, %Y' # If true, SmartyPants will be used to convert quotes and dashes to # typographically correct entities. #html_use_smartypants = True # Custom sidebar templates, maps document names to template names. #html_sidebars = {} # Additional templates that should be rendered to pages, maps page names to # template names. #html_additional_pages = {} # If false, no module index is generated. #html_domain_indices = True # If false, no index is generated. #html_use_index = True # If true, the index is split into individual pages for each letter. #html_split_index = False # If true, links to the reST sources are added to the pages. #html_show_sourcelink = True # If true, "Created using Sphinx" is shown in the HTML footer. Default is True. #html_show_sphinx = True # If true, "(C) Copyright ..." is shown in the HTML footer. Default is True. #html_show_copyright = True # If true, an OpenSearch description file will be output, and all pages will # contain a tag referring to it. The value of this option must be the # base URL from which the finished HTML is served. #html_use_opensearch = '' # This is the file name suffix for HTML files (e.g. ".xhtml"). #html_file_suffix = None # Output file base name for HTML help builder. htmlhelp_basename = 'petsc4py-man' # -- Options for LaTeX output -------------------------------------------------- latex_elements = { # The paper size ('letterpaper' or 'a4paper'). #'papersize': 'letterpaper', 'papersize': 'a4', # The font size ('10pt', '11pt' or '12pt'). #'pointsize': '10pt', # Additional stuff for the LaTeX preamble. #'preamble': '', 'printmodindex': '', 'printindex': '', 'preamble' : r'\usepackage{sphinxfix}', } latex_additional_files = ['sphinxfix.sty'] # Grouping the document tree into LaTeX files. List of tuples # (source start file, target name, title, author, documentclass [howto/manual]). latex_documents = [ ('manual', 'petsc4py.tex', u'PETSc for Python', u'Lisandro Dalcin', 'howto'), ] # The name of an image file (relative to this directory) to place at the top of # the title page. #latex_logo = None # For "manual" documents, if this is true, then toplevel headings are parts, # not chapters. #latex_use_parts = False # If true, show page references after internal links. #latex_show_pagerefs = False # If true, show URL addresses after external links. #latex_show_urls = False # Documents to append as an appendix to all manuals. #latex_appendices = [] # If false, no module index is generated. #latex_domain_indices = True # -- Options for manual page output -------------------------------------------- # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ ('index', 'petsc4py', u'PETSc for Python', [u'Lisandro Dalcin'], 1) ] # If true, show URL addresses after external links. #man_show_urls = False # -- Options for Texinfo output ------------------------------------------------ # Grouping the document tree into Texinfo files. List of tuples # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ ('index', 'petsc4py', u'PETSc for Python', u'Lisandro Dalcin', 'petsc4py', 'PETSc for Python.', 'Miscellaneous'), ] # Documents to append as an appendix to all manuals. #texinfo_appendices = [] # If false, no module index is generated. #texinfo_domain_indices = True # How to display URL addresses: 'footnote', 'no', or 'inline'. #texinfo_show_urls = 'footnote' # If true, do not generate a @detailmenu in the "Top" node's menu. #texinfo_no_detailmenu = False # -- Options for Epub output ---------------------------------------------- # Bibliographic Dublin Core info. epub_title = u'petsc4py' epub_author = u'Lisandro Dalcin' epub_publisher = u'Lisandro Dalcin' epub_copyright = u'2016, Lisandro Dalcin' # The basename for the epub file. It defaults to the project name. epub_basename = u'petsc4py' # The HTML theme for the epub output. Since the default themes are not optimized # for small screen space, using the same theme for HTML and epub output is # usually not wise. This defaults to 'epub', a theme designed to save visual # space. #epub_theme = 'epub' # The language of the text. It defaults to the language option # or en if the language is not set. #epub_language = '' # The scheme of the identifier. Typical schemes are ISBN or URL. #epub_scheme = '' # The unique identifier of the text. This can be a ISBN number # or the project homepage. #epub_identifier = '' # A unique identification for the text. #epub_uid = '' # A tuple containing the cover image and cover page html template filenames. #epub_cover = () # A sequence of (type, uri, title) tuples for the guide element of content.opf. #epub_guide = () # HTML files that should be inserted before the pages created by sphinx. # The format is a list of tuples containing the path and title. #epub_pre_files = [] # HTML files shat should be inserted after the pages created by sphinx. # The format is a list of tuples containing the path and title. #epub_post_files = [] # A list of files that should not be packed into the epub file. epub_exclude_files = ['search.html'] # The depth of the table of contents in toc.ncx. #epub_tocdepth = 3 # Allow duplicate toc entries. #epub_tocdup = True # Choose between 'default' and 'includehidden'. #epub_tocscope = 'default' # Fix unsupported image types using the PIL. #epub_fix_images = False # Scale large images. #epub_max_image_width = 0 # How to display URL addresses: 'footnote', 'no', or 'inline'. #epub_show_urls = 'inline' # If false, no index is generated. #epub_use_index = True petsc4py-3.7.0/docs/source/toctree.txt0000644000175000001440000000016512711377604020531 0ustar dalcinlusers00000000000000.. toctree:: :maxdepth: 2 overview install tutorial citing .. Local Variables: .. mode: rst .. End: petsc4py-3.7.0/docs/source/overview.rst0000644000175000001440000000775512711377604020737 0ustar dalcinlusers00000000000000Overview ======== PETSc_ is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI_ standard for all message-passing communication. PETSc is intended for use in large-scale application projects [petsc-efficient]_, and several ongoing computational science projects are built around the PETSc libraries. With strict attention to component interoperability, PETSc facilitates the integration of independently developed application modules, which often most naturally employ different coding styles and data structures. PETSc is easy to use for beginners [petsc-user-ref]_. Moreover, its careful design allows advanced users to have detailed control over the solution process. PETSc includes an expanding suite of parallel linear and nonlinear equation solvers that are easily used in application codes written in C, C++, and Fortran. PETSc provides many of the mechanisms needed within parallel application codes, such as simple parallel matrix and vector assembly routines that allow the overlap of communication and computation. .. [petsc-user-ref] S. Balay, S. Abhyankar, M.F. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W.D. Gropp, D. Karpeyev, D. Kaushik, M.G. Knepley, L. Curfman McInnes, K. Rupp, B.F. Smith, S. Zampini, H. Zhang, and H. Zhang, *PETSc Users Manual*, ANL-95/11 - Revision 3.7, 2016. http://www.mcs.anl.gov/petsc/petsc-current/docs/manual.pdf .. [petsc-efficient] Satish Balay, Victor Eijkhout, William D. Gropp, Lois Curfman McInnes and Barry F. Smith. Efficient Management of Parallelism in Object Oriented Numerical Software Libraries. Modern Software Tools in Scientific Computing. E. Arge, A. M. Bruaset and H. P. Langtangen, editors. 163--202. Birkhauser Press. 1997. .. include:: links.txt Components ---------- PETSc is designed with an object-oriented style. Almost all user-visible types are abstract interfaces with implementations that may be chosen at runtime. Those objects are managed through handles to opaque data structures which are created, accessed and destroyed by calling appropriate library routines. PETSc consists of a variety of components. Each component manipulates a particular family of objects and the operations one would like to perform on these objects. These components provide the functionality required for many parallel solutions of PDEs. :Vec: Provides the vector operations required for setting up and solving large-scale linear and nonlinear problems. Includes easy-to-use parallel scatter and gather operations, as well as special-purpose code for handling ghost points for regular data structures. :Mat: A large suite of data structures and code for the manipulation of parallel sparse matrices. Includes four different parallel matrix data structures, each appropriate for a different class of problems. :PC: A collection of sequential and parallel preconditioners, including (sequential) ILU(k), LU, and (both sequential and parallel) block Jacobi, overlapping additive Schwarz methods and (through BlockSolve95) ILU(0) and ICC(0). :KSP: Parallel implementations of many popular Krylov subspace iterative methods, including GMRES, CG, CGS, Bi-CG-Stab, two variants of TFQMR, CR, and LSQR. All are coded so that they are immediately usable with any preconditioners and any matrix data structures, including matrix-free methods. :SNES: Data-structure-neutral implementations of Newton-like methods for nonlinear systems. Includes both line search and trust region techniques with a single interface. Employs by default the above data structures and linear solvers. Users can set custom monitoring routines, convergence criteria, etc. :TS: Code for the time evolution of solutions of PDEs. In addition, provides pseudo-transient continuation techniques for computing steady-state solutions. petsc4py-3.7.0/docs/source/make.bat0000644000175000001440000001417712711377604017740 0ustar dalcinlusers00000000000000@ECHO OFF REM Command file for Sphinx documentation if "%SPHINXBUILD%" == "" ( set SPHINXBUILD=sphinx-build ) set BUILDDIR=_build set ALLSPHINXOPTS=-d %BUILDDIR%/doctrees %SPHINXOPTS% . set I18NSPHINXOPTS=%SPHINXOPTS% . if NOT "%PAPER%" == "" ( set ALLSPHINXOPTS=-D latex_paper_size=%PAPER% %ALLSPHINXOPTS% set I18NSPHINXOPTS=-D latex_paper_size=%PAPER% %I18NSPHINXOPTS% ) if "%1" == "" goto help if "%1" == "help" ( :help echo.Please use `make ^` where ^ is one of echo. html to make standalone HTML files echo. dirhtml to make HTML files named index.html in directories echo. singlehtml to make a single large HTML file echo. pickle to make pickle files echo. json to make JSON files echo. htmlhelp to make HTML files and a HTML help project echo. qthelp to make HTML files and a qthelp project echo. devhelp to make HTML files and a Devhelp project echo. epub to make an epub echo. latex to make LaTeX files, you can set PAPER=a4 or PAPER=letter echo. text to make text files echo. man to make manual pages echo. texinfo to make Texinfo files echo. gettext to make PO message catalogs echo. changes to make an overview over all changed/added/deprecated items echo. xml to make Docutils-native XML files echo. pseudoxml to make pseudoxml-XML files for display purposes echo. linkcheck to check all external links for integrity echo. doctest to run all doctests embedded in the documentation if enabled goto end ) if "%1" == "clean" ( for /d %%i in (%BUILDDIR%\*) do rmdir /q /s %%i del /q /s %BUILDDIR%\* goto end ) if "%1" == "html" ( %SPHINXBUILD% -b html %ALLSPHINXOPTS% %BUILDDIR%/html if errorlevel 1 exit /b 1 echo. echo.Build finished. The HTML pages are in %BUILDDIR%/html. goto end ) if "%1" == "dirhtml" ( %SPHINXBUILD% -b dirhtml %ALLSPHINXOPTS% %BUILDDIR%/dirhtml if errorlevel 1 exit /b 1 echo. echo.Build finished. The HTML pages are in %BUILDDIR%/dirhtml. goto end ) if "%1" == "singlehtml" ( %SPHINXBUILD% -b singlehtml %ALLSPHINXOPTS% %BUILDDIR%/singlehtml if errorlevel 1 exit /b 1 echo. echo.Build finished. The HTML pages are in %BUILDDIR%/singlehtml. goto end ) if "%1" == "pickle" ( %SPHINXBUILD% -b pickle %ALLSPHINXOPTS% %BUILDDIR%/pickle if errorlevel 1 exit /b 1 echo. echo.Build finished; now you can process the pickle files. goto end ) if "%1" == "json" ( %SPHINXBUILD% -b json %ALLSPHINXOPTS% %BUILDDIR%/json if errorlevel 1 exit /b 1 echo. echo.Build finished; now you can process the JSON files. goto end ) if "%1" == "htmlhelp" ( %SPHINXBUILD% -b htmlhelp %ALLSPHINXOPTS% %BUILDDIR%/htmlhelp if errorlevel 1 exit /b 1 echo. echo.Build finished; now you can run HTML Help Workshop with the ^ .hhp project file in %BUILDDIR%/htmlhelp. goto end ) if "%1" == "qthelp" ( %SPHINXBUILD% -b qthelp %ALLSPHINXOPTS% %BUILDDIR%/qthelp if errorlevel 1 exit /b 1 echo. echo.Build finished; now you can run "qcollectiongenerator" with the ^ .qhcp project file in %BUILDDIR%/qthelp, like this: echo.^> qcollectiongenerator %BUILDDIR%\qthelp\petsc4py.qhcp echo.To view the help file: echo.^> assistant -collectionFile %BUILDDIR%\qthelp\petsc4py.ghc goto end ) if "%1" == "devhelp" ( %SPHINXBUILD% -b devhelp %ALLSPHINXOPTS% %BUILDDIR%/devhelp if errorlevel 1 exit /b 1 echo. echo.Build finished. goto end ) if "%1" == "epub" ( %SPHINXBUILD% -b epub %ALLSPHINXOPTS% %BUILDDIR%/epub if errorlevel 1 exit /b 1 echo. echo.Build finished. The epub file is in %BUILDDIR%/epub. goto end ) if "%1" == "latex" ( %SPHINXBUILD% -b latex %ALLSPHINXOPTS% %BUILDDIR%/latex if errorlevel 1 exit /b 1 echo. echo.Build finished; the LaTeX files are in %BUILDDIR%/latex. goto end ) if "%1" == "latexpdf" ( %SPHINXBUILD% -b latex %ALLSPHINXOPTS% %BUILDDIR%/latex cd %BUILDDIR%/latex make all-pdf cd %BUILDDIR%/.. echo. echo.Build finished; the PDF files are in %BUILDDIR%/latex. goto end ) if "%1" == "latexpdfja" ( %SPHINXBUILD% -b latex %ALLSPHINXOPTS% %BUILDDIR%/latex cd %BUILDDIR%/latex make all-pdf-ja cd %BUILDDIR%/.. echo. echo.Build finished; the PDF files are in %BUILDDIR%/latex. goto end ) if "%1" == "text" ( %SPHINXBUILD% -b text %ALLSPHINXOPTS% %BUILDDIR%/text if errorlevel 1 exit /b 1 echo. echo.Build finished. The text files are in %BUILDDIR%/text. goto end ) if "%1" == "man" ( %SPHINXBUILD% -b man %ALLSPHINXOPTS% %BUILDDIR%/man if errorlevel 1 exit /b 1 echo. echo.Build finished. The manual pages are in %BUILDDIR%/man. goto end ) if "%1" == "texinfo" ( %SPHINXBUILD% -b texinfo %ALLSPHINXOPTS% %BUILDDIR%/texinfo if errorlevel 1 exit /b 1 echo. echo.Build finished. The Texinfo files are in %BUILDDIR%/texinfo. goto end ) if "%1" == "gettext" ( %SPHINXBUILD% -b gettext %I18NSPHINXOPTS% %BUILDDIR%/locale if errorlevel 1 exit /b 1 echo. echo.Build finished. The message catalogs are in %BUILDDIR%/locale. goto end ) if "%1" == "changes" ( %SPHINXBUILD% -b changes %ALLSPHINXOPTS% %BUILDDIR%/changes if errorlevel 1 exit /b 1 echo. echo.The overview file is in %BUILDDIR%/changes. goto end ) if "%1" == "linkcheck" ( %SPHINXBUILD% -b linkcheck %ALLSPHINXOPTS% %BUILDDIR%/linkcheck if errorlevel 1 exit /b 1 echo. echo.Link check complete; look for any errors in the above output ^ or in %BUILDDIR%/linkcheck/output.txt. goto end ) if "%1" == "doctest" ( %SPHINXBUILD% -b doctest %ALLSPHINXOPTS% %BUILDDIR%/doctest if errorlevel 1 exit /b 1 echo. echo.Testing of doctests in the sources finished, look at the ^ results in %BUILDDIR%/doctest/output.txt. goto end ) if "%1" == "xml" ( %SPHINXBUILD% -b xml %ALLSPHINXOPTS% %BUILDDIR%/xml if errorlevel 1 exit /b 1 echo. echo.Build finished. The XML files are in %BUILDDIR%/xml. goto end ) if "%1" == "pseudoxml" ( %SPHINXBUILD% -b pseudoxml %ALLSPHINXOPTS% %BUILDDIR%/pseudoxml if errorlevel 1 exit /b 1 echo. echo.Build finished. The pseudo-XML files are in %BUILDDIR%/pseudoxml. goto end ) :end petsc4py-3.7.0/docs/source/links.txt0000644000175000001440000000077312711377604020211 0ustar dalcinlusers00000000000000.. _MPI: http://www.mpi-forum.org .. _MPICH: http://www.mpich.org/ .. _Open MPI: http://www.open-mpi.org .. _PETSc: http://www.mcs.anl.gov/petsc/ .. _SLEPc: http://slepc.upv.es .. _TAO: http://www.mcs.anl.gov/tao/ .. _Python: http://www.python.org .. _NumPy: http://www.numpy.org .. _mpi4py: http://bitbucket.org/mpi4py/mpi4py .. _petsc4py: http://bitbucket.org/petsc/petsc4py .. _slepc4py: http://bitbucket.org/slepc/slepc4py petsc4py-3.7.0/docs/source/index.rst0000644000175000001440000000043712711377604020166 0ustar dalcinlusers00000000000000================ PETSc for Python ================ :Author: Lisandro Dalcin :Contact: dalcinl@gmail.com :Web Site: https://bitbucket.org/petsc/petsc4py :Date: |today| .. include:: abstract.txt Contents ======== .. include:: toctree.txt .. include:: links.txt petsc4py-3.7.0/docs/source/citing.rst0000644000175000001440000000131012711377604020323 0ustar dalcinlusers00000000000000Citations ========= If PETSc for Python been significant to a project that leads to an academic publication, please acknowledge that fact by citing the project. * L. Dalcin, P. Kler, R. Paz, and A. Cosimo, *Parallel Distributed Computing using Python*, Advances in Water Resources, 34(9):1124-1139, 2011. http://dx.doi.org/10.1016/j.advwatres.2011.04.013 * S. Balay, S. Abhyankar, M.F. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W.D. Gropp, D. Karpeyev, D. Kaushik, M.G. Knepley, L. Curfman McInnes, K. Rupp, B.F. Smith, S. Zampini, H. Zhang, and H. Zhang, *PETSc Users Manual*, ANL-95/11 - Revision 3.7, 2016. http://www.mcs.anl.gov/petsc/petsc-current/docs/manual.pdf petsc4py-3.7.0/docs/usrman/0000755000175000001440000000000012711405164016317 5ustar dalcinlusers00000000000000petsc4py-3.7.0/docs/usrman/search.html0000644000175000001440000000621512711405144020454 0ustar dalcinlusers00000000000000 Search — PETSc for Python 3.7.0 documentation

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A | E | M | P | S

A

ARCHFLAGS

E

environment variable
ARCHFLAGS
MACOSX_DEPLOYMENT_TARGET
PETSC_ARCH, [1]
PETSC_DIR, [1]
SDKROOT

M

MACOSX_DEPLOYMENT_TARGET

P

PETSC_ARCH, [1]
PETSC_DIR, [1]

S

SDKROOT

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petsc4py-3.7.0/docs/usrman/objects.inv0000644000175000001440000000037412711405144020470 0ustar dalcinlusers00000000000000# Sphinx inventory version 2 # Project: PETSc for Python # Version: 3.7 # The remainder of this file is compressed using zlib. xڅK 0yVqAWpt  &'M Uw/% 8=C.jT=x'ЏA6 Gh@fem= bF-aS"֝;_ 2g Ppetsc4py-3.7.0/docs/usrman/index.html0000644000175000001440000001575712711405144020331 0ustar dalcinlusers00000000000000 PETSc for Python — PETSc for Python 3.7.0 documentation

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PETSc for Python

Author:Lisandro Dalcin
Contact:dalcinl@gmail.com
Web Site:https://bitbucket.org/petsc/petsc4py
Date:May 01, 2016

Abstract

This document describes petsc4py, a Python port to the PETSc libraries.

PETSc (the Portable, Extensible Toolkit for Scientific Computation) is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI standard for all message-passing communication.

This package provides an important subset of PETSc functionalities and uses NumPy to efficiently manage input and output of array data.

A good friend of petsc4py is:

  • mpi4py: Python bindings for MPI, the Message Passing Interface.

Other projects depends on petsc4py:

  • slepc4py: Python bindings for SLEPc, the Scalable Library for Eigenvalue Problem Computations.

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petsc4py-3.7.0/docs/usrman/manual.html0000644000175000001440000001271612711405144020467 0ustar dalcinlusers00000000000000 PETSc for Python — PETSc for Python 3.7.0 documentation

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PETSc for Python

Abstract

This document describes petsc4py, a Python port to the PETSc libraries.

PETSc (the Portable, Extensible Toolkit for Scientific Computation) is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI standard for all message-passing communication.

This package provides an important subset of PETSc functionalities and uses NumPy to efficiently manage input and output of array data.

A good friend of petsc4py is:

  • mpi4py: Python bindings for MPI, the Message Passing Interface.

Other projects depends on petsc4py:

  • slepc4py: Python bindings for SLEPc, the Scalable Library for Eigenvalue Problem Computations.

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alism: 'al', iveness: 'ive', fulness: 'ful', ousness: 'ous', aliti: 'al', iviti: 'ive', biliti: 'ble', logi: 'log' }; var step3list = { icate: 'ic', ative: '', alize: 'al', iciti: 'ic', ical: 'ic', ful: '', ness: '' }; var c = "[^aeiou]"; // consonant var v = "[aeiouy]"; // vowel var C = c + "[^aeiouy]*"; // consonant sequence var V = v + "[aeiou]*"; // vowel sequence var mgr0 = "^(" + C + ")?" + V + C; // [C]VC... is m>0 var meq1 = "^(" + C + ")?" + V + C + "(" + V + ")?$"; // [C]VC[V] is m=1 var mgr1 = "^(" + C + ")?" + V + C + V + C; // [C]VCVC... is m>1 var s_v = "^(" + C + ")?" + v; // vowel in stem this.stemWord = function (w) { var stem; var suffix; var firstch; var origword = w; if (w.length < 3) return w; var re; var re2; var re3; var re4; firstch = w.substr(0,1); if (firstch == "y") w = firstch.toUpperCase() + w.substr(1); // Step 1a re = /^(.+?)(ss|i)es$/; re2 = /^(.+?)([^s])s$/; if (re.test(w)) w = w.replace(re,"$1$2"); else if (re2.test(w)) w = w.replace(re2,"$1$2"); // 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'); } // Prettify the comment rating. comment.pretty_rating = comment.rating + ' point' + (comment.rating == 1 ? '' : 's'); // Make a class (for displaying not yet moderated comments differently) comment.css_class = comment.displayed ? '' : ' moderate'; // Create a div for this comment. var context = $.extend({}, opts, comment); var div = $(renderTemplate(commentTemplate, context)); // If the user has voted on this comment, highlight the correct arrow. if (comment.vote) { var direction = (comment.vote == 1) ? 'u' : 'd'; div.find('#' + direction + 'v' + comment.id).hide(); div.find('#' + direction + 'u' + comment.id).show(); } if (opts.moderator || comment.text != '[deleted]') { div.find('a.reply').show(); if (comment.proposal_diff) div.find('#sp' + comment.id).show(); if (opts.moderator && !comment.displayed) div.find('#cm' + comment.id).show(); if (opts.moderator || (opts.username == comment.username)) div.find('#dc' + comment.id).show(); } return div; } /** * A simple template renderer. Placeholders such as <%id%> are replaced * by context['id'] with items being escaped. Placeholders such as <#id#> * are not escaped. */ function renderTemplate(template, context) { var esc = $(document.createElement('div')); function handle(ph, escape) { var cur = context; $.each(ph.split('.'), function() { cur = cur[this]; }); return escape ? esc.text(cur || "").html() : cur; } return template.replace(/<([%#])([\w\.]*)\1>/g, function() { return handle(arguments[2], arguments[1] == '%' ? true : false); }); } /** Flash an error message briefly. */ function showError(message) { $(document.createElement('div')).attr({'class': 'popup-error'}) .append($(document.createElement('div')) .attr({'class': 'error-message'}).text(message)) .appendTo('body') .fadeIn("slow") .delay(2000) .fadeOut("slow"); } /** Add a link the user uses to open the comments popup. */ $.fn.comment = function() { return this.each(function() { var id = $(this).attr('id').substring(1); var count = COMMENT_METADATA[id]; var title = count + ' comment' + (count == 1 ? '' : 's'); var image = count > 0 ? opts.commentBrightImage : opts.commentImage; var addcls = count == 0 ? ' nocomment' : ''; $(this) .append( $(document.createElement('a')).attr({ href: '#', 'class': 'sphinx-comment-open' + addcls, id: 'ao' + id }) .append($(document.createElement('img')).attr({ src: image, alt: 'comment', title: title })) .click(function(event) { event.preventDefault(); show($(this).attr('id').substring(2)); }) ) .append( $(document.createElement('a')).attr({ href: '#', 'class': 'sphinx-comment-close hidden', id: 'ah' + id }) .append($(document.createElement('img')).attr({ src: opts.closeCommentImage, alt: 'close', title: 'close' })) .click(function(event) { event.preventDefault(); hide($(this).attr('id').substring(2)); }) ); }); }; var opts = { processVoteURL: '/_process_vote', addCommentURL: '/_add_comment', getCommentsURL: '/_get_comments', acceptCommentURL: '/_accept_comment', deleteCommentURL: '/_delete_comment', commentImage: '/static/_static/comment.png', closeCommentImage: '/static/_static/comment-close.png', loadingImage: '/static/_static/ajax-loader.gif', commentBrightImage: '/static/_static/comment-bright.png', upArrow: '/static/_static/up.png', downArrow: '/static/_static/down.png', upArrowPressed: '/static/_static/up-pressed.png', downArrowPressed: '/static/_static/down-pressed.png', voting: false, moderator: false }; if (typeof COMMENT_OPTIONS != "undefined") { opts = jQuery.extend(opts, COMMENT_OPTIONS); } var popupTemplate = '\
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\
Comments
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\
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<#proposal_diff#>\
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    • \
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This script adds * in .sphixsidebar, after .sphinxsidebarwrapper, the #sidebarbutton * used to collapse and expand the sidebar. * * When the sidebar is collapsed the .sphinxsidebarwrapper is hidden * and the width of the sidebar and the margin-left of the document * are decreased. 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Any contribution welcome! petsc4py-3.7.0/docs/usrman/_sources/citing.txt0000644000175000001440000000131012711377604022161 0ustar dalcinlusers00000000000000Citations ========= If PETSc for Python been significant to a project that leads to an academic publication, please acknowledge that fact by citing the project. * L. Dalcin, P. Kler, R. Paz, and A. Cosimo, *Parallel Distributed Computing using Python*, Advances in Water Resources, 34(9):1124-1139, 2011. http://dx.doi.org/10.1016/j.advwatres.2011.04.013 * S. Balay, S. Abhyankar, M.F. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W.D. Gropp, D. Karpeyev, D. Kaushik, M.G. Knepley, L. Curfman McInnes, K. Rupp, B.F. Smith, S. Zampini, H. Zhang, and H. Zhang, *PETSc Users Manual*, ANL-95/11 - Revision 3.7, 2016. http://www.mcs.anl.gov/petsc/petsc-current/docs/manual.pdf petsc4py-3.7.0/docs/usrman/_sources/overview.txt0000644000175000001440000000775512711377604022575 0ustar dalcinlusers00000000000000Overview ======== PETSc_ is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI_ standard for all message-passing communication. PETSc is intended for use in large-scale application projects [petsc-efficient]_, and several ongoing computational science projects are built around the PETSc libraries. With strict attention to component interoperability, PETSc facilitates the integration of independently developed application modules, which often most naturally employ different coding styles and data structures. PETSc is easy to use for beginners [petsc-user-ref]_. Moreover, its careful design allows advanced users to have detailed control over the solution process. PETSc includes an expanding suite of parallel linear and nonlinear equation solvers that are easily used in application codes written in C, C++, and Fortran. PETSc provides many of the mechanisms needed within parallel application codes, such as simple parallel matrix and vector assembly routines that allow the overlap of communication and computation. .. [petsc-user-ref] S. Balay, S. Abhyankar, M.F. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W.D. Gropp, D. Karpeyev, D. Kaushik, M.G. Knepley, L. Curfman McInnes, K. Rupp, B.F. Smith, S. Zampini, H. Zhang, and H. Zhang, *PETSc Users Manual*, ANL-95/11 - Revision 3.7, 2016. http://www.mcs.anl.gov/petsc/petsc-current/docs/manual.pdf .. [petsc-efficient] Satish Balay, Victor Eijkhout, William D. Gropp, Lois Curfman McInnes and Barry F. Smith. Efficient Management of Parallelism in Object Oriented Numerical Software Libraries. Modern Software Tools in Scientific Computing. E. Arge, A. M. Bruaset and H. P. Langtangen, editors. 163--202. Birkhauser Press. 1997. .. include:: links.txt Components ---------- PETSc is designed with an object-oriented style. Almost all user-visible types are abstract interfaces with implementations that may be chosen at runtime. Those objects are managed through handles to opaque data structures which are created, accessed and destroyed by calling appropriate library routines. PETSc consists of a variety of components. Each component manipulates a particular family of objects and the operations one would like to perform on these objects. These components provide the functionality required for many parallel solutions of PDEs. :Vec: Provides the vector operations required for setting up and solving large-scale linear and nonlinear problems. Includes easy-to-use parallel scatter and gather operations, as well as special-purpose code for handling ghost points for regular data structures. :Mat: A large suite of data structures and code for the manipulation of parallel sparse matrices. Includes four different parallel matrix data structures, each appropriate for a different class of problems. :PC: A collection of sequential and parallel preconditioners, including (sequential) ILU(k), LU, and (both sequential and parallel) block Jacobi, overlapping additive Schwarz methods and (through BlockSolve95) ILU(0) and ICC(0). :KSP: Parallel implementations of many popular Krylov subspace iterative methods, including GMRES, CG, CGS, Bi-CG-Stab, two variants of TFQMR, CR, and LSQR. All are coded so that they are immediately usable with any preconditioners and any matrix data structures, including matrix-free methods. :SNES: Data-structure-neutral implementations of Newton-like methods for nonlinear systems. Includes both line search and trust region techniques with a single interface. Employs by default the above data structures and linear solvers. Users can set custom monitoring routines, convergence criteria, etc. :TS: Code for the time evolution of solutions of PDEs. In addition, provides pseudo-transient continuation techniques for computing steady-state solutions. petsc4py-3.7.0/docs/usrman/_sources/manual.txt0000644000175000001440000000020012711377604022156 0ustar dalcinlusers00000000000000================ PETSc for Python ================ .. include:: abstract.txt .. include:: toctree.txt .. include:: links.txt petsc4py-3.7.0/docs/usrman/_sources/index.txt0000644000175000001440000000043712711377604022024 0ustar dalcinlusers00000000000000================ PETSc for Python ================ :Author: Lisandro Dalcin :Contact: dalcinl@gmail.com :Web Site: https://bitbucket.org/petsc/petsc4py :Date: |today| .. include:: abstract.txt Contents ======== .. include:: toctree.txt .. include:: links.txt petsc4py-3.7.0/docs/usrman/_sources/install.txt0000644000175000001440000000713612711377604022366 0ustar dalcinlusers00000000000000Installation ============ Using **pip** or **easy_install** --------------------------------- You can use :program:`pip` to install :mod:`petsc4py` and its dependencies (:mod:`mpi4py` is optional but highly recommended):: $ pip install [--user] numpy mpi4py $ pip install [--user] petsc petsc4py Alternatively, you can use :program:`easy_install` (deprecated):: $ easy_install petsc4py If you already have a working PETSc installation, set environment variables :envvar:`PETSC_DIR` and :envvar:`PETSC_ARCH` to appropriate values and next use :program:`pip`:: $ export PETSC_DIR=/path/to/petsc $ export PETSC_ARCH=arch-linux2-c-opt $ pip install petsc4py Using **distutils** ------------------- Requirements ^^^^^^^^^^^^ You need to have the following software properly installed in order to build *PETSc for Python*: * Any MPI_ implementation [#]_ (e.g., MPICH_ or `Open MPI`_), built with shared libraries. * A matching version of PETSc_ built with shared libraries. * NumPy_ package. .. [#] Unless you have appropiatelly configured and built PETSc without MPI (configure option :option:`--with-mpi=0`). .. [#] You may need to use a parallelized version of the Python interpreter with some MPI-1 implementations (e.g. MPICH1). .. include:: links.txt Downloading ^^^^^^^^^^^ The *PETSc for Python* package is available for download at the project website generously hosted by Bitbucket. You can use :program:`curl` or :program:`wget` to get a release tarball. * Using :program:`curl`:: $ curl -O https://bitbucket.org/petsc/petsc4py/petsc4py-X.Y.tar.gz * Using :program:`wget`:: $ wget https://bitbucket.org/petsc/petsc4py/petsc4py-X.Y.tar.gz Building ^^^^^^^^ After unpacking the release tarball:: $ tar -zxf petsc4py-X.Y.tar.gz $ cd petsc4py-X.Y the distribution is ready for building. .. note:: **Mac OS X** users employing a Python distribution built with **universal binaries** may need to set the environment variables :envvar:`MACOSX_DEPLOYMENT_TARGET`, :envvar:`SDKROOT`, and :envvar:`ARCHFLAGS` to appropriate values. As an example, assume your Mac is running **Snow Leopard** on a **64-bit Intel** processor and you want to override the hard-wired cross-development SDK in Python configuration, your environment should be modified like this:: $ export MACOSX_DEPLOYMENT_TARGET=10.6 $ export SDKROOT=/ $ export ARCHFLAGS='-arch x86_64' Some environment configuration is needed to inform the location of PETSc. You can set (using :command:`setenv`, :command:`export` or what applies to you shell or system) the environment variables :envvar:`PETSC_DIR`, and :envvar:`PETSC_ARCH` indicating where you have built/installed PETSc:: $ export PETSC_DIR=/usr/local/petsc $ export PETSC_ARCH=arch-linux2-c-opt Alternatively, you can edit the file :file:`setup.cfg` and provide the required information below the ``[config]`` section:: [config] petsc_dir = /usr/local/petsc petsc_arch = arch-linux2-c-opt ... Finally, you can build the distribution by typing:: $ python setup.py build Installing ^^^^^^^^^^ After building, the distribution is ready for installation. If you have root privileges (either by log-in as the root user of by using :command:`sudo`) and you want to install *PETSc for Python* in your system for all users, just do:: $ python setup.py install The previous steps will install the :mod:`petsc4py` package at standard location :file:`{prefix}/lib/python{X}.{X}/site-packages`. If you do not have root privileges or you want to install *PETSc for Python* for your private use, just do:: $ python setup.py install --user petsc4py-3.7.0/docs/usrman/tutorial.html0000644000175000001440000000754112711405144021055 0ustar dalcinlusers00000000000000 Tutorial — PETSc for Python 3.7.0 documentation

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      Overview

      PETSc is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI standard for all message-passing communication.

      PETSc is intended for use in large-scale application projects [petsc-efficient], and several ongoing computational science projects are built around the PETSc libraries. With strict attention to component interoperability, PETSc facilitates the integration of independently developed application modules, which often most naturally employ different coding styles and data structures.

      PETSc is easy to use for beginners [petsc-user-ref]. Moreover, its careful design allows advanced users to have detailed control over the solution process. PETSc includes an expanding suite of parallel linear and nonlinear equation solvers that are easily used in application codes written in C, C++, and Fortran. PETSc provides many of the mechanisms needed within parallel application codes, such as simple parallel matrix and vector assembly routines that allow the overlap of communication and computation.

      [petsc-user-ref]S. Balay, S. Abhyankar, M.F. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W.D. Gropp, D. Karpeyev, D. Kaushik, M.G. Knepley, L. Curfman McInnes, K. Rupp, B.F. Smith, S. Zampini, H. Zhang, and H. Zhang, PETSc Users Manual, ANL-95/11 - Revision 3.7, 2016. http://www.mcs.anl.gov/petsc/petsc-current/docs/manual.pdf
      [petsc-efficient]Satish Balay, Victor Eijkhout, William D. Gropp, Lois Curfman McInnes and Barry F. Smith. Efficient Management of Parallelism in Object Oriented Numerical Software Libraries. Modern Software Tools in Scientific Computing. E. Arge, A. M. Bruaset and H. P. Langtangen, editors. 163–202. Birkhauser Press. 1997.

      Components

      PETSc is designed with an object-oriented style. Almost all user-visible types are abstract interfaces with implementations that may be chosen at runtime. Those objects are managed through handles to opaque data structures which are created, accessed and destroyed by calling appropriate library routines.

      PETSc consists of a variety of components. Each component manipulates a particular family of objects and the operations one would like to perform on these objects. These components provide the functionality required for many parallel solutions of PDEs.

      Vec:Provides the vector operations required for setting up and solving large-scale linear and nonlinear problems. Includes easy-to-use parallel scatter and gather operations, as well as special-purpose code for handling ghost points for regular data structures.
      Mat:A large suite of data structures and code for the manipulation of parallel sparse matrices. Includes four different parallel matrix data structures, each appropriate for a different class of problems.
      PC:A collection of sequential and parallel preconditioners, including (sequential) ILU(k), LU, and (both sequential and parallel) block Jacobi, overlapping additive Schwarz methods and (through BlockSolve95) ILU(0) and ICC(0).
      KSP:Parallel implementations of many popular Krylov subspace iterative methods, including GMRES, CG, CGS, Bi-CG-Stab, two variants of TFQMR, CR, and LSQR. All are coded so that they are immediately usable with any preconditioners and any matrix data structures, including matrix-free methods.
      SNES:Data-structure-neutral implementations of Newton-like methods for nonlinear systems. Includes both line search and trust region techniques with a single interface. Employs by default the above data structures and linear solvers. Users can set custom monitoring routines, convergence criteria, etc.
      TS:Code for the time evolution of solutions of PDEs. In addition, provides pseudo-transient continuation techniques for computing steady-state solutions.

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      Using pip or easy_install

      You can use pip to install petsc4py and its dependencies (mpi4py is optional but highly recommended):

      $ pip install [--user] numpy mpi4py
$ pip install [--user] petsc petsc4py

      Alternatively, you can use easy_install (deprecated):

      $ easy_install petsc4py

      If you already have a working PETSc installation, set environment variables PETSC_DIR and PETSC_ARCH to appropriate values and next use pip:

      $ export PETSC_DIR=/path/to/petsc
$ export PETSC_ARCH=arch-linux2-c-opt
$ pip install petsc4py

      Using distutils

      Requirements

      You need to have the following software properly installed in order to build PETSc for Python:

      • Any MPI implementation [1] (e.g., MPICH or Open MPI), built with shared libraries.
      • A matching version of PETSc built with shared libraries.
      • NumPy package.
      [1]Unless you have appropiatelly configured and built PETSc without MPI (configure option --with-mpi=0).
      [2]You may need to use a parallelized version of the Python interpreter with some MPI-1 implementations (e.g. MPICH1).

      Downloading

      The PETSc for Python package is available for download at the project website generously hosted by Bitbucket. You can use curl or wget to get a release tarball.

      • Using curl:

        $ curl -O https://bitbucket.org/petsc/petsc4py/petsc4py-X.Y.tar.gz

      • Using wget:

        $ wget https://bitbucket.org/petsc/petsc4py/petsc4py-X.Y.tar.gz

      Building

      After unpacking the release tarball:

      $ tar -zxf petsc4py-X.Y.tar.gz
$ cd petsc4py-X.Y

      the distribution is ready for building.

      Note

      Mac OS X users employing a Python distribution built with universal binaries may need to set the environment variables MACOSX_DEPLOYMENT_TARGET, SDKROOT, and ARCHFLAGS to appropriate values. As an example, assume your Mac is running Snow Leopard on a 64-bit Intel processor and you want to override the hard-wired cross-development SDK in Python configuration, your environment should be modified like this:

      $ export MACOSX_DEPLOYMENT_TARGET=10.6
$ export SDKROOT=/
$ export ARCHFLAGS='-arch x86_64'

      Some environment configuration is needed to inform the location of PETSc. You can set (using setenv, export or what applies to you shell or system) the environment variables PETSC_DIR, and PETSC_ARCH indicating where you have built/installed PETSc:

      $ export PETSC_DIR=/usr/local/petsc
$ export PETSC_ARCH=arch-linux2-c-opt

      Alternatively, you can edit the file setup.cfg and provide the required information below the [config] section:

      [config]
petsc_dir  = /usr/local/petsc
petsc_arch = arch-linux2-c-opt
...

      Finally, you can build the distribution by typing:

      $ python setup.py build

      Installing

      After building, the distribution is ready for installation.

      If you have root privileges (either by log-in as the root user of by using sudo) and you want to install PETSc for Python in your system for all users, just do:

      $ python setup.py install

      The previous steps will install the petsc4py package at standard location prefix/lib/pythonX.X/site-packages.

      If you do not have root privileges or you want to install PETSc for Python for your private use, just do:

      $ python setup.py install --user

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      petsc4py-3.7.0/docs/usrman/citing.html0000644000175000001440000001043312711405144020461 0ustar dalcinlusers00000000000000 Citations — PETSc for Python 3.7.0 documentation

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      If PETSc for Python been significant to a project that leads to an academic publication, please acknowledge that fact by citing the project.

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BR>ɰ"MjM6ˡ*!oTA5M1c*ǤfA BC4B4CZ ]U.{ۡ;.@/A? [Ӻ 1 jYT}x aaVaN%o[E؀5Цwj۰\=#84)J2e .Tn~,] CHANGES: PETSc for Python

      CHANGES: PETSc for Python

      Author: Lisandro Dalcin
      Contact: dalcinl@gmail.com

      Release 3.7.0

      • Update to PETSc 3.7 release.

      Release 3.6.0

      • Update to PETSc 3.6 release.

      Release 3.5.1

      • Add Log.{begin|view|destroy}().

      • Add Mat.SOR() and Mat.SORType.

      • Add DMPlex.createCoarsePointIS().

      • Add LGMap.createSF().

      • Add SNES.getVIInactiveSet().

      • Add Vec.isaxpy().

      • Add PC.setReusePreconditioner().

      • Return correct type in DM.getCoordinateDM().

      • Fix SWIG wrappers to handle 64bit PetscInt.

      • Fix linker flags for Python from Fink.

      Release 3.5

      • Update to PETSc 3.5 release.

      Release 3.4

      • Update to PETSc 3.4 release.

      • Add support for DMComposite and DMPlex.

      • Change Mat.getSizes() to return ((m,M),(n,N)).

      Release 3.3.1

      • Fix Options.getAll() mishandling values with negative numbers.

      • Minor backward compatibility fix for PETSc 3.2 .

      • Minor bugfix for TSPYTHON subtype.

      Release 3.3

      • Update to PETSc 3.3 release.

      • Change Vec.getLocalForm() to Vec.localForm() for use with context manager and add Vec.setMPIGhost().

      • Add AO.createMemoryScalable() and LGMap.block() / LGMap.unblock()

      • Add Object.handle property (C pointer as a Python integer). Can be used with ctypes to pass a PETSc handle.

      • Add Comm.tompi4py() to get a mpi4py communicator instance.

      Release 1.2

      • Update to PETSc 3.2 release.

      • Add new DM class , make DA inherit from DM.

      • Better support for inplace LU/ILU and Cholesky/ICC factorization and factor PC subtypes.

      • Now the Mat/PC/KSP/SNES/TS Python subtypes are implemented with Cython.

      • Better interaction between Python garbage collector and PETSc objects.

      • Support for PEP 3118 and legacy Python's buffer interface.

      Release 1.1.2

      This is a new-features and bug-fix release.

      • Add support for copying and computing complements in IS (IS.copy() and IS.complement()).

      • Add support for coarsening in DA (DA.coarsen()).

      • Support for shallow copy and deep copy operations (use copy.copy and copy.deepcopy). Deep copy is only supported for a bunch of types (IS, Scatter, Vec, Mat)

      • Support for pip install petsc4py to download and install PETSc.

      Release 1.1.1

      This is a new-features and bug-fix release.

      • Support for setting PETSC_COMM_WORLD before PETSc initialization.

      • Support for coordinates, refinement and interpolation in DA. Many thanks to Blaise Bourdin.

      • Workaround build failures when PETSc is built with mpiuni.

      • Workaround GIL-related APIs for non-threaded Python builds.

      Release 1.1

      • Update for API cleanups, changes, and new calls in PETSc 3.1 and some other missing features.

      • Add support for Jed Brown's THETA an GL timestepper implementations.

      • Fix the annoying issues related to Open MPI shared libraries dependencies and Python dynamic loading.

      • Many minor bug-fixes. Many thanks to Ethan Coon, Dmitry Karpeev, Juha Jaykka, and Michele De Stefano.

      Release 1.0.3

      This is a bug-fix release.

      • Added a quick fix to solve build issues. The macro __SDIR__ is no longer passed to the compiler in the command line.

      Release 1.0.2

      This is a new-features and bug-fix release.

      • Now petsc4py works against core PETSc built with complex scalars.

      • Added support for PETSc logging features like stages, classes and events. Stages and events support the context manager interface (with statement).

      • Documentation generated with Epydoc and Sphinx is now included in the release tarball.

      • Removed enumeration-like classes from the petsc4py.PETSc module namespace. For example, now you have to use PETSc.KSP.Type instead of PETSc.KSPType.

      • The PETSc.IS to numpy.ndarray conversion now works for stride and block index sets.

      • Implemented a more robust import machinery for multi-arch petsc4py installations. Now a wrong value in the PETSC_ARCH environmental variable emit a warning (instead of failing) at import time.

      • The unittest-based testsuite now can run under nose with its default options.

      • Removed the dependency on numpy.distutils, just use core Python distutils.

      Release 1.0.1

      This is a bug-fix release. Compile Cython-generated C sources with -Wwrite-strings removed, as this flag (inherited from PETSc) made GCC emit a lot of (harmless but annoying) warnings about conversion of string literals to non-const char pointers.

      Release 1.0.0

      This is the fist release of the all-new, Cython-based, implementation of PETSc for Python.

      petsc4py-3.7.0/CHANGES.rst0000644000175000001440000001145012711377604015674 0ustar dalcinlusers00000000000000========================= CHANGES: PETSc for Python ========================= :Author: Lisandro Dalcin :Contact: dalcinl@gmail.com Release 3.7.0 ============= - Update to PETSc 3.7 release. Release 3.6.0 ============= - Update to PETSc 3.6 release. Release 3.5.1 ============= - Add ``Log.{begin|view|destroy}()``. - Add ``Mat.SOR()`` and ``Mat.SORType``. - Add ``DMPlex.createCoarsePointIS()``. - Add ``LGMap.createSF()``. - Add ``SNES.getVIInactiveSet()``. - Add ``Vec.isaxpy()``. - Add ``PC.setReusePreconditioner()``. - Return correct type in ``DM.getCoordinateDM()``. - Fix SWIG wrappers to handle 64bit ``PetscInt``. - Fix linker flags for Python from Fink. Release 3.5 =========== - Update to PETSc 3.5 release. Release 3.4 =========== - Update to PETSc 3.4 release. - Add support for ``DMComposite`` and ``DMPlex``. - Change ``Mat.getSizes()`` to return ``((m,M),(n,N))``. Release 3.3.1 ============= - Fix ``Options.getAll()`` mishandling values with negative numbers. - Minor backward compatibility fix for PETSc 3.2 . - Minor bugfix for TSPYTHON subtype. Release 3.3 =========== - Update to PETSc 3.3 release. - Change ``Vec.getLocalForm()`` to ``Vec.localForm()`` for use with context manager and add ``Vec.setMPIGhost()``. - Add ``AO.createMemoryScalable()`` and ``LGMap.block()`` / ``LGMap.unblock()`` - Add ``Object.handle`` property (C pointer as a Python integer). Can be used with ``ctypes`` to pass a PETSc handle. - Add ``Comm.tompi4py()`` to get a ``mpi4py`` communicator instance. Release 1.2 =========== - Update to PETSc 3.2 release. - Add new ``DM`` class , make ``DA`` inherit from ``DM``. - Better support for inplace LU/ILU and Cholesky/ICC factorization and factor PC subtypes. - Now the ``Mat``/``PC``/``KSP``/``SNES``/``TS`` Python subtypes are implemented with Cython. - Better interaction between Python garbage collector and PETSc objects. - Support for PEP 3118 and legacy Python's buffer interface. Release 1.1.2 ============= This is a new-features and bug-fix release. - Add support for copying and computing complements in ``IS`` (``IS.copy()`` and ``IS.complement()``). - Add support for coarsening in ``DA`` (``DA.coarsen()``). - Support for shallow copy and deep copy operations (use ``copy.copy`` and ``copy.deepcopy``). Deep copy is only supported for a bunch of types (``IS``, ``Scatter``, ``Vec``, ``Mat``) - Support for ``pip install petsc4py`` to download and install PETSc. Release 1.1.1 ============= This is a new-features and bug-fix release. - Support for setting PETSC_COMM_WORLD before PETSc initialization. - Support for coordinates, refinement and interpolation in DA. Many thanks to Blaise Bourdin. - Workaround build failures when PETSc is built with *mpiuni*. - Workaround GIL-related APIs for non-threaded Python builds. Release 1.1 =========== - Update for API cleanups, changes, and new calls in PETSc 3.1 and some other missing features. - Add support for Jed Brown's THETA an GL timestepper implementations. - Fix the annoying issues related to Open MPI shared libraries dependencies and Python dynamic loading. - Many minor bug-fixes. Many thanks to Ethan Coon, Dmitry Karpeev, Juha Jaykka, and Michele De Stefano. Release 1.0.3 ============= This is a bug-fix release. - Added a quick fix to solve build issues. The macro __SDIR__ is no longer passed to the compiler in the command line. Release 1.0.2 ============= This is a new-features and bug-fix release. - Now ``petsc4py`` works against core PETSc built with complex scalars. - Added support for PETSc logging features like stages, classes and events. Stages and events support the context manager interface (``with`` statement). - Documentation generated with Epydoc and Sphinx is now included in the release tarball. - Removed enumeration-like classes from the ``petsc4py.PETSc`` module namespace. For example, now you have to use ``PETSc.KSP.Type`` instead of ``PETSc.KSPType``. - The ``PETSc.IS`` to ``numpy.ndarray`` conversion now works for stride and block index sets. - Implemented a more robust import machinery for multi-arch ``petsc4py`` installations. Now a wrong value in the ``PETSC_ARCH`` environmental variable emit a warning (instead of failing) at import time. - The unittest-based testsuite now can run under ``nose`` with its default options. - Removed the dependency on ``numpy.distutils``, just use core Python ``distutils``. Release 1.0.1 ============= This is a bug-fix release. Compile Cython-generated C sources with ``-Wwrite-strings`` removed, as this flag (inherited from PETSc) made GCC emit a lot of (harmless but annoying) warnings about conversion of string literals to non-const char pointers. Release 1.0.0 ============= This is the fist release of the all-new, Cython-based, implementation of *PETSc for Python*. petsc4py-3.7.0/setup.py0000755000175000001440000002101612711377604015606 0ustar dalcinlusers00000000000000#!/usr/bin/env python # Author: Lisandro Dalcin # Contact: dalcinl@gmail.com """ PETSc for Python """ import sys import os import re try: import setuptools except ImportError: setuptools = None pyver = sys.version_info[:2] if pyver < (2, 6) or (3, 0) <= pyver < (3, 2): raise RuntimeError("Python version 2.6, 2.7 or >= 3.2 required") # -------------------------------------------------------------------- # Metadata # -------------------------------------------------------------------- topdir = os.path.abspath(os.path.dirname(__file__)) from conf.metadata import metadata def name(): return 'petsc4py' def version(): with open(os.path.join(topdir, 'src', '__init__.py')) as f: m = re.search(r"__version__\s*=\s*'(.*)'", f.read()) return m.groups()[0] def description(): with open(os.path.join(topdir, 'DESCRIPTION.rst')) as f: return f.read() name = name() version = version() url = 'https://bitbucket.org/petsc/%(name)s/' % vars() download = url + 'downloads/%(name)s-%(version)s.tar.gz' % vars() devstat = ['Development Status :: 5 - Production/Stable'] keywords = ['PETSc', 'MPI'] metadata['name'] = name metadata['version'] = version metadata['description'] = __doc__.strip() metadata['long_description'] = description() metadata['keywords'] += keywords metadata['classifiers'] += devstat metadata['url'] = url metadata['download_url'] = download metadata['provides'] = ['petsc4py'] metadata['requires'] = ['numpy'] # -------------------------------------------------------------------- # Extension modules # -------------------------------------------------------------------- def get_ext_modules(Extension): from os import walk, path from glob import glob depends = [] for pth, dirs, files in walk('src'): depends += glob(path.join(pth, '*.h')) depends += glob(path.join(pth, '*.c')) try: import numpy numpy_includes = [numpy.get_include()] except ImportError: numpy_includes = [] return [Extension('petsc4py.lib.PETSc', sources=['src/PETSc.c', 'src/libpetsc4py.c', ], include_dirs=['src/include', ] + numpy_includes, depends=depends)] # -------------------------------------------------------------------- # Setup # -------------------------------------------------------------------- from conf.petscconf import setup, Extension from conf.petscconf import config, build, build_src, build_ext, install from conf.petscconf import clean, test, sdist CYTHON = '0.22' def run_setup(): setup_args = metadata.copy() if setuptools: setup_args['zip_safe'] = False setup_args['install_requires'] = ['numpy'] PETSC_DIR = os.environ.get('PETSC_DIR') if not (PETSC_DIR and os.path.isdir(PETSC_DIR)): vstr = setup_args['version'].split('.')[:2] x, y = int(vstr[0]), int(vstr[1]) PETSC = ">=%s.%s,<%s.%s" % (x, y, x, y+1) setup_args['install_requires'] += ['petsc'+PETSC] if setuptools: src = os.path.join('src', 'petsc4py.PETSc.c') has_src = os.path.exists(os.path.join(topdir, src)) has_git = os.path.isdir(os.path.join(topdir, '.git')) has_hg = os.path.isdir(os.path.join(topdir, '.hg')) if not has_src or has_git or has_hg: setup_args['setup_requires'] = ['Cython>='+CYTHON] # setup(packages = ['petsc4py', 'petsc4py.lib',], package_dir = {'petsc4py' : 'src', 'petsc4py.lib' : 'src/lib'}, package_data = {'petsc4py' : ['include/petsc4py/*.h', 'include/petsc4py/*.i', 'include/petsc4py/*.pxd', 'include/petsc4py/*.pxi', 'include/petsc4py/*.pyx',], 'petsc4py.lib' : ['petsc.cfg'],}, ext_modules = get_ext_modules(Extension), cmdclass = {'config' : config, 'build' : build, 'build_src' : build_src, 'build_ext' : build_ext, 'install' : install, 'clean' : clean, 'test' : test, 'sdist' : sdist, }, **setup_args) def chk_cython(VERSION): from distutils import log from distutils.version import LooseVersion from distutils.version import StrictVersion warn = lambda msg='': sys.stderr.write(msg+'\n') # try: import Cython except ImportError: warn("*"*80) warn() warn(" You need to generate C source files with Cython!!") warn(" Download and install Cython ") warn() warn("*"*80) return False # try: CYTHON_VERSION = Cython.__version__ except AttributeError: from Cython.Compiler.Version import version as CYTHON_VERSION REQUIRED = VERSION m = re.match(r"(\d+\.\d+(?:\.\d+)?).*", CYTHON_VERSION) if m: Version = StrictVersion AVAILABLE = m.groups()[0] else: Version = LooseVersion AVAILABLE = CYTHON_VERSION if (REQUIRED is not None and Version(AVAILABLE) < Version(REQUIRED)): warn("*"*80) warn() warn(" You need to install Cython %s (you have version %s)" % (REQUIRED, CYTHON_VERSION)) warn(" Download and install Cython ") warn() warn("*"*80) return False # return True def run_cython(source, depends=(), includes=(), destdir_c=None, destdir_h=None, wdir=None, force=False, VERSION=None): from glob import glob from distutils import log from distutils import dep_util from distutils.errors import DistutilsError target = os.path.splitext(source)[0]+'.c' cwd = os.getcwd() try: if wdir: os.chdir(wdir) alldeps = [source] for dep in depends: alldeps += glob(dep) if not (force or dep_util.newer_group(alldeps, target)): log.debug("skipping '%s' -> '%s' (up-to-date)", source, target) return finally: os.chdir(cwd) if not chk_cython(VERSION): raise DistutilsError("requires Cython>=%s" % VERSION) log.info("cythonizing '%s' -> '%s'", source, target) from conf.cythonize import cythonize err = cythonize(source, includes=includes, destdir_c=destdir_c, destdir_h=destdir_h, wdir=wdir) if err: raise DistutilsError( "Cython failure: '%s' -> '%s'" % (source, target)) def build_sources(cmd): from os.path import exists, isdir, join if (exists(join('src', 'petsc4py.PETSc.c')) and not (isdir('.hg') or isdir('.git')) and not cmd.force): return # petsc4py.PETSc source = 'petsc4py.PETSc.pyx' depends = ('include/*/*.pxd', 'PETSc/*.pyx', 'PETSc/*.pxi',) includes = ['include'] destdir_h = os.path.join('include', 'petsc4py') run_cython(source, depends, includes, destdir_c=None, destdir_h=destdir_h, wdir='src', force=cmd.force, VERSION=CYTHON) # libpetsc4py source = os.path.join('libpetsc4py', 'libpetsc4py.pyx') depends = ['include/petsc4py/*.pxd', 'libpetsc4py/*.pyx', 'libpetsc4py/*.pxi'] includes = ['include'] run_cython(source, depends, includes, destdir_c=None, destdir_h=None, wdir='src', force=cmd.force, VERSION=CYTHON) build_src.run = build_sources def run_testsuite(cmd): from distutils.errors import DistutilsError sys.path.insert(0, 'test') try: from runtests import main finally: del sys.path[0] if cmd.dry_run: return args = cmd.args[:] or [] if cmd.verbose < 1: args.insert(0,'-q') if cmd.verbose > 1: args.insert(0,'-v') err = main(args) if err: raise DistutilsError("test") test.run = run_testsuite # -------------------------------------------------------------------- def main(): run_setup() if __name__ == '__main__': main() # -------------------------------------------------------------------- petsc4py-3.7.0/test/0000755000175000001440000000000012711405164015041 5ustar dalcinlusers00000000000000petsc4py-3.7.0/test/test_object.py0000644000175000001440000001746312711377604017742 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest # -------------------------------------------------------------------- class BaseTestObject(object): CLASS, FACTORY = None, None TARGS, KARGS = (), {} BUILD = None def setUp(self): self.obj = self.CLASS() getattr(self.obj,self.FACTORY)(*self.TARGS, **self.KARGS) if not self.obj: self.obj.create() def tearDown(self): self.obj = None def testTypeRegistry(self): type_reg = PETSc.__type_registry__ classid = self.obj.getClassId() typeobj = self.CLASS if isinstance(self.obj, PETSc.DMDA): typeobj = PETSc.DM self.assertTrue(type_reg[classid] is typeobj ) def testLogClass(self): name = self.CLASS.__name__ if name == 'DMDA': name = 'DM' logcls = PETSc.Log.Class(name) classid = self.obj.getClassId() self.assertEqual(logcls.id, classid) def testClass(self): self.assertTrue(isinstance(self.obj, self.CLASS)) self.assertTrue(type(self.obj) is self.CLASS) def testNonZero(self): self.assertTrue(bool(self.obj)) def testDestroy(self): self.assertTrue(bool(self.obj)) self.obj.destroy() self.assertFalse(bool(self.obj)) ## self.assertRaises(PETSc.Error, self.obj.destroy) ## self.assertTrue(self.obj.this is this) def testOptions(self): self.assertFalse(self.obj.getOptionsPrefix()) prefix1 = 'my_' self.obj.setOptionsPrefix(prefix1) self.assertEqual(self.obj.getOptionsPrefix(), prefix1) prefix2 = 'opt_' self.obj.setOptionsPrefix(prefix2) self.assertEqual(self.obj.getOptionsPrefix(), prefix2) ## self.obj.appendOptionsPrefix(prefix1) ## self.assertEqual(self.obj.getOptionsPrefix(), ## prefix2 + prefix1) ## self.obj.prependOptionsPrefix(prefix1) ## self.assertEqual(self.obj.getOptionsPrefix(), ## prefix1 + prefix2 + prefix1) self.obj.setFromOptions() def testName(self): oldname = self.obj.getName() newname = '%s-%s' %(oldname, oldname) self.obj.setName(newname) self.assertEqual(self.obj.getName(), newname) self.obj.setName(oldname) self.assertEqual(self.obj.getName(), oldname) def testComm(self): comm = self.obj.getComm() self.assertTrue(isinstance(comm, PETSc.Comm)) self.assertTrue(comm in [PETSc.COMM_SELF, PETSc.COMM_WORLD]) def testRefCount(self): self.assertEqual(self.obj.getRefCount(), 1) self.obj.incRef() self.assertEqual(self.obj.getRefCount(), 2) self.obj.incRef() self.assertEqual(self.obj.getRefCount(), 3) self.obj.decRef() self.assertEqual(self.obj.getRefCount(), 2) self.obj.decRef() self.assertEqual(self.obj.getRefCount(), 1) self.obj.decRef() self.assertFalse(bool(self.obj)) def testHandle(self): self.assertTrue(self.obj.handle) self.assertTrue(self.obj.fortran) h, f = self.obj.handle, self.obj.fortran if (h>0 and f>0) or (h<0 and f<0): self.assertEqual(h, f) self.obj.destroy() self.assertFalse(self.obj.handle) self.assertFalse(self.obj.fortran) def testComposeQuery(self): self.assertEqual(self.obj.getRefCount(), 1) self.obj.compose('myobj', self.obj) self.assertTrue(type(self.obj.query('myobj')) is self.CLASS) self.assertEqual(self.obj.query('myobj'), self.obj) self.assertEqual(self.obj.getRefCount(), 2) self.obj.compose('myobj', None) self.assertEqual(self.obj.getRefCount(), 1) self.assertEqual(self.obj.query('myobj'), None) def testProperties(self): self.assertEqual(self.obj.getClassId(), self.obj.classid) self.assertEqual(self.obj.getClassName(), self.obj.klass) self.assertEqual(self.obj.getType(), self.obj.type) self.assertEqual(self.obj.getName(), self.obj.name) self.assertEqual(self.obj.getComm(), self.obj.comm) self.assertEqual(self.obj.getRefCount(), self.obj.refcount) def testShallowCopy(self): import copy rc = self.obj.getRefCount() obj = copy.copy(self.obj) self.assertTrue(obj is not self.obj) self.assertTrue(obj == self.obj) self.assertTrue(type(obj) is type(self.obj)) self.assertEqual(obj.getRefCount(), rc+1) del obj self.assertEqual(self.obj.getRefCount(), rc) def testDeepCopy(self): import copy rc = self.obj.getRefCount() try: obj = copy.deepcopy(self.obj) except NotImplementedError: return self.assertTrue(obj is not self.obj) self.assertTrue(obj != self.obj) self.assertTrue(type(obj) is type(self.obj)) self.assertEqual(self.obj.getRefCount(), rc) self.assertEqual(obj.getRefCount(), 1) del obj # -------------------------------------------------------------------- class TestObjectRandom(BaseTestObject, unittest.TestCase): CLASS = PETSc.Random FACTORY = 'create' class TestObjectViewer(BaseTestObject, unittest.TestCase): CLASS = PETSc.Viewer FACTORY = 'create' class TestObjectIS(BaseTestObject, unittest.TestCase): CLASS = PETSc.IS FACTORY = 'createGeneral' TARGS = ([],) class TestObjectLGMap(BaseTestObject, unittest.TestCase): CLASS = PETSc.LGMap FACTORY = 'create' TARGS = ([],) class TestObjectAO(BaseTestObject, unittest.TestCase): CLASS = PETSc.AO FACTORY = 'createMapping' TARGS = ([], []) class TestObjectDMDA(BaseTestObject, unittest.TestCase): CLASS = PETSc.DMDA FACTORY = 'create' TARGS = ([3,3,3],) class TestObjectVec(BaseTestObject, unittest.TestCase): CLASS = PETSc.Vec FACTORY = 'createSeq' TARGS = (0,) def setUp(self): BaseTestObject.setUp(self) self.obj.assemble() class TestObjectScatter(BaseTestObject, unittest.TestCase): CLASS = PETSc.Scatter FACTORY = 'create' def setUp(self): v1, v2 = PETSc.Vec().createSeq(0), PETSc.Vec().createSeq(0) i1, i2 = PETSc.IS().createGeneral([]), PETSc.IS().createGeneral([]) self.obj = PETSc.Scatter().create(v1, i1, v2, i2) del v1, v2, i1, i2 class TestObjectMat(BaseTestObject, unittest.TestCase): CLASS = PETSc.Mat FACTORY = 'createAIJ' TARGS = (0,) KARGS = {'nnz':0, 'comm': PETSc.COMM_SELF} def setUp(self): BaseTestObject.setUp(self) self.obj.assemble() class TestObjectNullSpace(BaseTestObject, unittest.TestCase): CLASS = PETSc.NullSpace FACTORY = 'create' TARGS = (True, []) class TestObjectKSP(BaseTestObject, unittest.TestCase): CLASS = PETSc.KSP FACTORY = 'create' class TestObjectPC(BaseTestObject, unittest.TestCase): CLASS = PETSc.PC FACTORY = 'create' class TestObjectSNES(BaseTestObject, unittest.TestCase): CLASS = PETSc.SNES FACTORY = 'create' class TestObjectTS(BaseTestObject, unittest.TestCase): CLASS = PETSc.TS FACTORY = 'create' def setUp(self): super(TestObjectTS, self).setUp() self.obj.setProblemType(PETSc.TS.ProblemType.NONLINEAR) self.obj.setType(PETSc.TS.Type.BEULER) class TestObjectTAO(BaseTestObject, unittest.TestCase): CLASS = PETSc.TAO FACTORY = 'create' class TestObjectAOBasic(BaseTestObject, unittest.TestCase): CLASS = PETSc.AO FACTORY = 'createBasic' TARGS = ([], []) class TestObjectAOMapping(BaseTestObject, unittest.TestCase): CLASS = PETSc.AO FACTORY = 'createMapping' TARGS = ([], []) # -------------------------------------------------------------------- import numpy if numpy.iscomplexobj(PETSc.ScalarType()): del TestObjectTAO if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_pc_py.py0000644000175000001440000002142412711377604017576 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- from petsc4py import PETSc import unittest from sys import getrefcount # -------------------------------------------------------------------- class BaseMyPC(object): def setup(self, pc): pass def reset(self, pc): pass def apply(self, pc, x, y): raise NotImplementedError def applyT(self, pc, x, y): self.apply(pc, x, y) def applyS(self, pc, x, y): self.apply(pc, x, y) def applySL(self, pc, x, y): self.applyS(pc, x, y) def applySR(self, pc, x, y): self.applyS(pc, x, y) def applyRich(self, pc, x, y, w, tols): self.apply(pc, x, y) class MyPCNone(BaseMyPC): def apply(self, pc, x, y): x.copy(y) class MyPCJacobi(BaseMyPC): def setup(self, pc): A, P = pc.getOperators() self.diag = P.getDiagonal() self.diag.reciprocal() def reset(self, pc): self.diag.destroy() del self.diag def apply(self, pc, x, y): y.pointwiseMult(self.diag, x) def applyS(self, pc, x, y): self.diag.copy(y) y.sqrtabs() y.pointwiseMult(y, x) class PC_PYTHON_CLASS(object): def __init__(self): self.impl = None self.log = {} def _log(self, method, *args): self.log.setdefault(method, 0) self.log[method] += 1 def create(self, pc): self._log('create', pc) def destroy(self, pc): self._log('destroy') self.impl = None def reset(self, pc): self._log('reset', pc) def view(self, pc, vw): self._log('view', pc, vw) assert isinstance(pc, PETSc.PC) assert isinstance(vw, PETSc.Viewer) pass def setFromOptions(self, pc): self._log('setFromOptions', pc) assert isinstance(pc, PETSc.PC) OptDB = PETSc.Options(pc) impl = OptDB.getString('impl','MyPCNone') klass = globals()[impl] self.impl = klass() def setUp(self, pc): self._log('setUp', pc) assert isinstance(pc, PETSc.PC) self.impl.setup(pc) def preSolve(self, pc, ksp, b, x): self._log('preSolve', pc, ksp, b, x) def postSolve(self, pc, ksp, b, x): self._log('postSolve', pc, ksp, b, x) def apply(self, pc, x, y): self._log('apply', pc, x, y) assert isinstance(pc, PETSc.PC) assert isinstance(x, PETSc.Vec) assert isinstance(y, PETSc.Vec) self.impl.apply(pc, x, y) def applySymmetricLeft(self, pc, x, y): self._log('applySymmetricLeft', pc, x, y) assert isinstance(pc, PETSc.PC) assert isinstance(x, PETSc.Vec) assert isinstance(y, PETSc.Vec) self.impl.applySL(pc, x, y) def applySymmetricRight(self, pc, x, y): self._log('applySymmetricRight', pc, x, y) assert isinstance(pc, PETSc.PC) assert isinstance(x, PETSc.Vec) assert isinstance(y, PETSc.Vec) self.impl.applySR(pc, x, y) def applyTranspose(self, pc, x, y): self._log('applyTranspose', pc, x, y) assert isinstance(pc, PETSc.PC) assert isinstance(x, PETSc.Vec) assert isinstance(y, PETSc.Vec) self.impl.applyT(pc, x, y) def applyRichardson(self, pc, x, y, w, tols): self._log('applyRichardson', pc, x, y, w, tols) assert isinstance(pc, PETSc.PC) assert isinstance(x, PETSc.Vec) assert isinstance(y, PETSc.Vec) assert isinstance(w, PETSc.Vec) assert isinstance(tols, tuple) assert len(tols) == 4 self.impl.applyRich(pc, x, y, w, tols) class TestPCPYTHON(unittest.TestCase): PC_TYPE = PETSc.PC.Type.PYTHON PC_PREFIX = 'test-' def setUp(self): pc = self.pc = PETSc.PC() pc.create(PETSc.COMM_SELF) pc.setType(self.PC_TYPE) module = __name__ factory = 'PC_PYTHON_CLASS' self.pc.prefix = self.PC_PREFIX OptDB = PETSc.Options(self.pc) assert OptDB.prefix == self.pc.prefix OptDB['pc_python_type'] = '%s.%s' % (module, factory) self.pc.setFromOptions() del OptDB['pc_python_type'] assert self._getCtx().log['create'] == 1 assert self._getCtx().log['setFromOptions'] == 1 ctx = self._getCtx() self.assertEqual(getrefcount(ctx), 3) def tearDown(self): ctx = self._getCtx() self.pc.destroy() # XXX self.pc = None assert ctx.log['destroy'] == 1 self.assertEqual(getrefcount(ctx), 2) def _prepare(self): A = PETSc.Mat().createAIJ([3,3], comm=PETSc.COMM_SELF) A.setUp() A.assemble() A.shift(10) x, y = A.createVecs() x.setRandom() self.pc.setOperators(A, A) assert (A,A) == self.pc.getOperators() return A, x, y def _getCtx(self): return self.pc.getPythonContext() def _applyMeth(self, meth): A, x, y = self._prepare() getattr(self.pc, meth)(x,y) if 'reset' not in self._getCtx().log: assert self._getCtx().log['setUp'] == 1 assert self._getCtx().log[meth] == 1 else: nreset = self._getCtx().log['reset'] nsetup = self._getCtx().log['setUp'] nmeth = self._getCtx().log[meth] assert (nreset == nsetup) assert (nreset == nmeth) if isinstance(self._getCtx().impl, MyPCNone): self.assertTrue(y.equal(x)) def testApply(self): self._applyMeth('apply') def testApplySymmetricLeft(self): self._applyMeth('applySymmetricLeft') def testApplySymmetricRight(self): self._applyMeth('applySymmetricRight') def testApplyTranspose(self): self._applyMeth('applyTranspose') ## def testApplyRichardson(self): ## x, y = self._prepare() ## w = x.duplicate() ## tols = 0,0,0,0 ## self.pc.applyRichardson(x,y,w,tols) ## assert self._getCtx().log['setUp'] == 1 ## assert self._getCtx().log['applyRichardson'] == 1 ## def testView(self): ## vw = PETSc.ViewerString(100, self.pc.comm) ## self.pc.view(vw) ## s = vw.getString() ## assert 'python' in s ## module = __name__ ## factory = 'self._getCtx()' ## assert '.'.join([module, factory]) in s def testResetAndApply(self): self.pc.reset() self.testApply() self.pc.reset() self.testApply() self.pc.reset() def testKSPSolve(self): A, x, y = self._prepare() ksp = PETSc.KSP().create(self.pc.comm) ksp.setType(PETSc.KSP.Type.PREONLY) assert self.pc.getRefCount() == 1 ksp.setPC(self.pc) assert self.pc.getRefCount() == 2 # normal ksp solve, twice ksp.solve(x,y) assert self._getCtx().log['setUp' ] == 1 assert self._getCtx().log['apply' ] == 1 assert self._getCtx().log['preSolve' ] == 1 assert self._getCtx().log['postSolve'] == 1 ksp.solve(x,y) assert self._getCtx().log['setUp' ] == 1 assert self._getCtx().log['apply' ] == 2 assert self._getCtx().log['preSolve' ] == 2 assert self._getCtx().log['postSolve'] == 2 # transpose ksp solve, twice ksp.solveTranspose(x,y) assert self._getCtx().log['setUp' ] == 1 assert self._getCtx().log['applyTranspose'] == 1 ksp.solveTranspose(x,y) assert self._getCtx().log['setUp' ] == 1 assert self._getCtx().log['applyTranspose'] == 2 del ksp # ksp.destroy() assert self.pc.getRefCount() == 1 def testGetSetContext(self): ctx = self.pc.getPythonContext() self.pc.setPythonContext(ctx) self.assertEqual(getrefcount(ctx), 3) del ctx class TestPCPYTHON2(TestPCPYTHON): def setUp(self): OptDB = PETSc.Options(self.PC_PREFIX) OptDB['impl'] = 'MyPCJacobi' super(TestPCPYTHON2, self).setUp() clsname = type(self._getCtx().impl).__name__ assert clsname == OptDB['impl'] del OptDB['impl'] class TestPCPYTHON3(TestPCPYTHON): def setUp(self): pc = self.pc = PETSc.PC() ctx = PC_PYTHON_CLASS() pc.createPython(ctx, comm=PETSc.COMM_SELF) self.pc.prefix = self.PC_PREFIX self.pc.setFromOptions() assert self._getCtx().log['create'] == 1 assert self._getCtx().log['setFromOptions'] == 1 class TestPCPYTHON4(TestPCPYTHON3): def setUp(self): OptDB = PETSc.Options(self.PC_PREFIX) OptDB['impl'] = 'MyPCJacobi' super(TestPCPYTHON4, self).setUp() clsname = type(self._getCtx().impl).__name__ assert clsname == OptDB['impl'] del OptDB['impl'] # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_is.py0000644000175000001440000001076112711377604017101 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest import random # -------------------------------------------------------------------- class BaseTestIS(object): TYPE = None def tearDown(self): self.iset = None def testGetType(self): istype = self.iset.getType() self.assertEqual(istype, self.TYPE) def testGetSize(self): lsize = self.iset.getLocalSize() gsize = self.iset.getSize() self.assertTrue(lsize <= gsize) def testDuplicate(self): iset = self.iset.duplicate() self.assertTrue(self.iset.equal(iset)) del iset def testCopy(self): iset = self.iset.copy() self.assertTrue(self.iset.equal(iset)) del iset def testEqual(self): self.assertTrue(self.iset.equal(self.iset)) iset = self.iset.duplicate() self.assertTrue(self.iset.equal(iset)) del iset def testSort(self): self.iset.sort() self.assertTrue(self.iset.isSorted()) def testDifference(self): iset = self.iset.difference(self.iset) self.assertEqual(iset.getLocalSize(), 0) del iset def testComplement(self): self.iset.sort() nmin = self.iset.getIndices().min() nmax = self.iset.getIndices().max() iset = self.iset.complement(nmin, nmax+1) iset.complement(nmin, nmax+1) del iset def testSum(self): if self.iset.getComm().getSize() > 1: return self.iset.sort() iset = self.iset.duplicate() iset.sum(self.iset) self.assertTrue(self.iset.equal(iset)) del iset def testExpand(self): iset = self.iset.expand(self.iset) if self.iset.type == iset.type: self.assertTrue(self.iset.equal(iset)) del iset def testProperties(self): proplist = ['sizes', 'size', 'local_size', 'indices', 'permutation', 'identity', 'sorted'] for prop in proplist: self.assertTrue(hasattr(self.iset, prop)) def testArray(self): import numpy refs = self.iset.getRefCount() arr1 = numpy.asarray(self.iset) self.assertEqual(self.iset.getRefCount(), refs+1) arr2 = self.iset.array self.assertEqual(self.iset.getRefCount(), refs+2) self.assertTrue((arr1 == arr2).all()) del arr2 self.assertEqual(self.iset.getRefCount(), refs+1) del arr1 self.assertEqual(self.iset.getRefCount(), refs) # -------------------------------------------------------------------- class TestISGeneral(BaseTestIS, unittest.TestCase): TYPE = PETSc.IS.Type.GENERAL def setUp(self): self.idx = list(range(10)) random.shuffle(self.idx) self.iset = PETSc.IS().createGeneral(self.idx) def testGetIndices(self): idx = self.iset.getIndices() self.assertEqual(self.idx, list(idx)) class TestISStride(BaseTestIS, unittest.TestCase): TYPE = PETSc.IS.Type.STRIDE def setUp(self): self.info = (10, 7, 3) size, start, step = self.info self.iset = PETSc.IS().createStride(size, start, step) def testGetIndices(self): size, start, step = self.info indices = [start+i*step for i in range(size)] self.assertEqual(list(self.iset.getIndices()), indices) def testToGeneral(self): self.iset.toGeneral() self.assertEqual(self.iset.getType(), PETSc.IS.Type.GENERAL) class TestISBlock(BaseTestIS, unittest.TestCase): TYPE = PETSc.IS.Type.BLOCK def setUp(self): self.bsize = 3 self.index = list(range(0,10,2)) random.shuffle(self.index) self.iset = PETSc.IS().createBlock(self.bsize, self.index) self.assertEqual(self.iset.getType(), PETSc.IS.Type.BLOCK) def testGetSize(self): lsize = self.iset.getLocalSize() self.assertEqual(lsize/self.bsize, len(self.index)) def testGetBlockSize(self): bs = self.iset.getBlockSize() self.assertEqual(bs, self.bsize) def testGetBlockIndices(self): index = list(self.iset.getBlockIndices()) self.assertEqual(index, self.index) def testGetIndices(self): bs = self.bsize idx = [] for i in self.iset.getBlockIndices(): for j in range(bs): idx.append(i*bs+j) index = list(self.iset.getIndices()) #self.assertEqual(index, idx) # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_ksp_py.py0000644000175000001440000000535712711377604020000 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- from petsc4py import PETSc import unittest from sys import getrefcount # -------------------------------------------------------------------- class MyKSP(object): def __init__(self): pass def create(self, ksp): self.work = [] def destroy(self, ksp): for v in self.work: v.destroy() def setUp(self, ksp): self.work[:] = ksp.getWorkVecs(right=2, left=None) def reset(self, ksp): for v in self.work: v.destroy() del self.work[:] def loop(self, ksp, r): its = ksp.getIterationNumber() rnorm = r.norm() ksp.setResidualNorm(rnorm) ksp.logConvergenceHistory(rnorm) ksp.monitor(its, rnorm) reason = ksp.callConvergenceTest(its, rnorm) if not reason: ksp.setIterationNumber(its+1) else: ksp.setConvergedReason(reason) return reason class MyRichardson(MyKSP): def solve(self, ksp, b, x): A, B = ksp.getOperators() P = ksp.getPC() r, z = self.work # A.mult(x, r) r.aypx(-1, b) P.apply(r, z) x.axpy(1, z) while not self.loop(ksp, z): A.mult(x, r) r.aypx(-1, b) P.apply(r, z) x.axpy(1, z) class MyCG(MyKSP): def setUp(self, ksp): super(MyCG, self).setUp(ksp) d = self.work[0].duplicate() q = d.duplicate() self.work += [d, q] def solve(self, ksp, b, x): A, B = ksp.getOperators() P = ksp.getPC() r, z, d, q = self.work # A.mult(x, r) r.aypx(-1, b) r.copy(d) delta_0 = r.dot(r) delta = delta_0 while not self.loop(ksp, r): A.mult(d, q) alpha = delta / d.dot(q) x.axpy(+alpha, d) r.axpy(-alpha, q) delta_old = delta delta = r.dot(r) beta = delta / delta_old d.aypx(beta, r) # -------------------------------------------------------------------- from test_ksp import BaseTestKSP class BaseTestKSPPYTHON(BaseTestKSP): KSP_TYPE = PETSc.KSP.Type.PYTHON ContextClass = None def setUp(self): super(BaseTestKSPPYTHON, self).setUp() ctx = self.ContextClass() self.ksp.setPythonContext(ctx) class TestKSPPYTHON_RICH(BaseTestKSPPYTHON, unittest.TestCase): PC_TYPE = PETSc.PC.Type.JACOBI ContextClass = MyRichardson class TestKSPPYTHON_CG(BaseTestKSPPYTHON, unittest.TestCase): PC_TYPE = PETSc.PC.Type.NONE ContextClass = MyCG # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_log.py0000644000175000001440000001066012711377604017245 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- if __name__ == "__main__": import sys, petsc4py petsc4py.init(sys.argv+['-log_summary']) # -------------------------------------------------------------------- from petsc4py import PETSc import unittest # -------------------------------------------------------------------- class TestLog(unittest.TestCase): def setUp(self): #PETSc.Log.begin() # register stages self.stage1 = PETSc.Log.Stage('Stage 1') self.stage2 = PETSc.Log.Stage('Stage 2') # register classes self.klassA = PETSc.Log.Class('Class A') self.klassB = PETSc.Log.Class('Class B') # register events self.event1 = PETSc.Log.Event('Event 1') # no class self.event2 = PETSc.Log.Event('Event 2') # no class self.eventA = PETSc.Log.Event('Event A', self.klassA) self.eventB = PETSc.Log.Event('Event B', self.klassB) def testGetName(self): self.assertEqual(self.klassA.name, 'Class A') self.assertEqual(self.klassB.name, 'Class B') self.assertEqual(self.event1.name, 'Event 1') self.assertEqual(self.event2.name, 'Event 2') self.assertEqual(self.eventA.name, 'Event A') self.assertEqual(self.eventB.name, 'Event B') self.assertEqual(self.stage1.name, 'Stage 1') self.assertEqual(self.stage2.name, 'Stage 2') def testLogBeginEnd(self): # ----- self._run_events() # in main stage self._run_stages() # in user stages # ----- for event in self._get_events(): event.deactivate() event.setActive(False) event.active = False self._run_events() # should not be logged for event in self._get_events(): event.activate() event.setActive(True) event.active = True # ----- for klass in self._get_classes(): klass.deactivate() klass.setActive(False) klass.active = False self._run_events() # A and B should not be logged for klass in self._get_classes(): klass.activate() klass.setActive(True) klass.active = True # ----- for stage in self._get_stages(): active = stage.getActive() self.assertTrue(active) self.assertTrue(stage.active) stage.setActive(False) active = stage.getActive() self.assertFalse(active) self.assertFalse(stage.active) self._run_stages() # should not be logged for stage in self._get_stages(): stage.setActive(True) stage.active = True active = stage.getActive() self.assertTrue(active) self.assertTrue(stage.active) # ----- self._run_events() self._run_stages() def testLogBarrierBeginEnd(self): self._run_events_barrier() # in main stage self._run_stages_barrier() # in user stages def _run_stages(self): for stage in self._get_stages(): self._run_events(stage) def _get_stages(self): return (self.stage1, self.stage2) def _get_classes(self): return (self.klassA, self.klassB) def _get_events(self): return (self.event1, self.event2, self.eventA, self.eventB) def _run_events(self, stage=None): if stage is not None: stage.push() self._events_begin() self._events_end() if stage is not None: stage.pop() def _events_begin(self): for event in self._get_events(): event.begin() def _events_end(self): for event in reversed(self._get_events()): event.end() def _run_stages_barrier(self): for stage in self._get_stages(): self._run_events_barrier(stage) def _run_events_barrier(self, stage=None): if stage is not None: stage.push() self._events_begin_barrier() self._events_end_barrier() if stage is not None: stage.pop() def _events_begin_barrier(self): for event in self._get_events(): event.barrierBegin() def _events_end_barrier(self): for event in reversed(self._get_events()): event.barrierEnd() # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_sys.py0000644000175000001440000000356012711377604017303 0ustar dalcinlusers00000000000000import unittest from petsc4py import PETSc # -------------------------------------------------------------------- class TestVersion(unittest.TestCase): def testGetVersion(self): version = PETSc.Sys.getVersion() self.assertTrue(version > (0, 0, 0)) v, patch = PETSc.Sys.getVersion(patch=True) self.assertTrue(version == v) self.assertTrue(patch >= 0) v, date = PETSc.Sys.getVersion(date=True) self.assertTrue(version == v) self.assertTrue(isinstance(date, str)) v, author = PETSc.Sys.getVersion(author=True) self.assertTrue(version == v) self.assertTrue(isinstance(author, (list,tuple))) def testGetVersionInfo(self): version = PETSc.Sys.getVersion() info = PETSc.Sys.getVersionInfo() self.assertEqual(version, (info['major'], info['minor'], info['subminor'],)) self.assertTrue(isinstance(info['release'], bool)) _, patch = PETSc.Sys.getVersion(patch=True) self.assertEqual(patch, info['patch']) v, date = PETSc.Sys.getVersion(date=True) self.assertEqual(date, info['date']) def testGetSetDefaultComm(self): c = PETSc.Sys.getDefaultComm() self.assertEqual(c, PETSc.COMM_WORLD) PETSc.Sys.setDefaultComm(PETSc.COMM_SELF) c = PETSc.Sys.getDefaultComm() self.assertEqual(c, PETSc.COMM_SELF) PETSc.Sys.setDefaultComm(PETSc.COMM_WORLD) c = PETSc.Sys.getDefaultComm() self.assertEqual(c, PETSc.COMM_WORLD) f = lambda : PETSc.Sys.setDefaultComm(PETSc.COMM_NULL) self.assertRaises(ValueError, f) # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() # -------------------------------------------------------------------- petsc4py-3.7.0/test/test_gc.py0000644000175000001440000000460712711377604017061 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest import gc, weakref import warnings # -------------------------------------------------------------------- ## gc.set_debug((gc.DEBUG_STATS | ## gc.DEBUG_LEAK) & ## ~gc.DEBUG_SAVEALL) # -------------------------------------------------------------------- class BaseTestGC(object): def setUp(self): self.obj = self.CLASS().create(comm=PETSc.COMM_SELF) def tearDown(self): wref = self.make_weakref() self.assertTrue(wref() is self.obj) self.obj = None gc.collect() self.assertTrue(wref() is None) def make_weakref(self): wref = weakref.ref(self.obj) return wref def testCycleInSelf(self): self.obj.setAttr('myself', self.obj) def testCycleInMethod(self): self.obj.setAttr('mymeth', self.obj.view) def testCycleInInstance(self): class A: pass a = A() a.obj = self.obj self.obj.setAttr('myinst', a) def testCycleInAllWays(self): self.testCycleInSelf() self.testCycleInMethod() self.testCycleInInstance() # -------------------------------------------------------------------- class TestGCVec(BaseTestGC, unittest.TestCase): CLASS = PETSc.Vec class TestGCVecSubType(TestGCVec): CLASS = type('_Vec', (PETSc.Vec,), {}) class TestGCMat(BaseTestGC, unittest.TestCase): CLASS = PETSc.Mat class TestGCMatSubType(TestGCMat): CLASS = type('_Mat', (PETSc.Mat,), {}) class TestGCPC(BaseTestGC, unittest.TestCase): CLASS = PETSc.PC class TestGCPCSubType(TestGCPC): CLASS = type('_PC', (PETSc.PC,), {}) class TestGCKSP(BaseTestGC, unittest.TestCase): CLASS = PETSc.KSP class TestGCKSPSubType(TestGCKSP): CLASS = type('_KSP', (PETSc.KSP,), {}) class TestGCSNES(BaseTestGC, unittest.TestCase): CLASS = PETSc.SNES def testCycleInAppCtx(self): self.obj.setAppCtx(self.obj) class TestGCSNESSubType(TestGCSNES): CLASS = type('_SNES', (PETSc.SNES,), {}) class TestGCTS(BaseTestGC, unittest.TestCase): CLASS = PETSc.TS def testCycleInAppCtx(self): self.obj.setAppCtx(self.obj) class TestGCTSSubType(TestGCTS): CLASS = type('_TS', (PETSc.TS,), {}) def testCycleInAppCtx(self): self.obj.setAppCtx(self.obj) # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_mat_fact.py0000644000175000001440000001156112711377604020243 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest import numpy as N def mkmat(n, mtype, opts): A = PETSc.Mat().create(PETSc.COMM_SELF) A.setSizes([n,n]) A.setType(mtype) A.setUp() for o in opts: A.setOption(o, True) return A def mksys_diag(n, mtype, opts): A = mkmat(n, mtype, opts) x, b = A.createVecs() for i in range(n): A[i,i] = i+1 x[i] = 1.0/(i+1) b[i] = 1 A.assemble() x.assemble() b.assemble() return A, x, b def mksys_poi2(n, mtype, opts): A = mkmat(n, mtype, opts) x, b = A.createVecs() for i in range(n): if i == 0: cols = [i, i+1] vals = [2, -1] elif i == n-1: cols = [i-1, i] vals = [-1, 2] else: cols = [i-1, i, i+1] vals = [-1, 2, -1] A[i,cols] = vals x[i] = i+1 b[i] = 0 A.assemble() x.assemble() b.assemble() A.mult(x,b) return A, x, b class BaseTestMatFactor(object): MKSYS = None MTYPE = None MOPTS = () def setUp(self): A, x, b = self.MKSYS(10, self.MTYPE, self.MOPTS) self.A = A self.x = x self.b = b def tearDown(self): self.A.setUnfactored() self.A.destroy(); self.A = None self.x.destroy(); self.x = None self.b.destroy(); self.b = None class BaseTestMatFactorLU(BaseTestMatFactor): def testFactorLU(self): r, c = self.A.getOrdering("nd") self.A.reorderForNonzeroDiagonal(r, c) self.A.factorLU(r,c,{'zeropivot':1e-5}) x = self.x.duplicate() self.A.solve(self.b, x) x.axpy(-1, self.x) self.assertTrue(x.norm() < 1e-3) class BaseTestMatFactorILU(BaseTestMatFactor): def testFactorILU(self): r, c = self.A.getOrdering("natural") self.A.factorILU(r,c,{'levels':0}) x = self.x.duplicate() self.A.solve(self.b, x) x.axpy(-1, self.x) self.assertTrue(x.norm() < 1e-3) ## class BaseTestMatFactorILUDT(BaseTestMatFactor): ## ## def testFactorILUDT(self): ## r, c = self.A.getOrdering("natural") ## self.A = self.A.factorILUDT(r,c) ## x = self.x.duplicate() ## self.A.solve(self.b, x) ## x.axpy(-1, self.x) ## self.assertTrue(x.norm() < 1e-3) ## class BaseTestMatFactorChol(BaseTestMatFactor): def testFactorChol(self): r, c = self.A.getOrdering("natural") self.A.factorCholesky(r) x = self.x.duplicate() self.A.solve(self.b, x) x.axpy(-1, self.x) self.assertTrue(x.norm() < 1e-3) class BaseTestMatFactorICC(BaseTestMatFactor): def testFactorICC(self): r, c = self.A.getOrdering("natural") self.A.factorICC(r) x = self.x.duplicate() self.A.solve(self.b, x) x.axpy(-1, self.x) self.assertTrue(x.norm() < 1e-3) # -------------------------------------------------------------------- class TestMatFactorA1(BaseTestMatFactorLU, BaseTestMatFactorChol, unittest.TestCase): MKSYS = staticmethod(mksys_diag) MTYPE = PETSc.Mat.Type.SEQDENSE class TestMatFactorA2(BaseTestMatFactorLU, BaseTestMatFactorChol, unittest.TestCase): MKSYS = staticmethod(mksys_poi2) MTYPE = PETSc.Mat.Type.SEQDENSE # --- class TestMatFactorB1(BaseTestMatFactorLU, BaseTestMatFactorILU, ## BaseTestMatFactorILUDT, unittest.TestCase): MKSYS = staticmethod(mksys_diag) MTYPE = PETSc.Mat.Type.SEQAIJ class TestMatFactorB2(BaseTestMatFactorLU, BaseTestMatFactorILU, ## BaseTestMatFactorILUDT, unittest.TestCase): MKSYS = staticmethod(mksys_poi2) MTYPE = PETSc.Mat.Type.SEQAIJ # --- class TestMatFactorC1(BaseTestMatFactorLU, BaseTestMatFactorILU, unittest.TestCase): MKSYS = staticmethod(mksys_diag) MTYPE = PETSc.Mat.Type.SEQBAIJ class TestMatFactorC2(BaseTestMatFactorLU, BaseTestMatFactorILU, unittest.TestCase): MKSYS = staticmethod(mksys_poi2) MTYPE = PETSc.Mat.Type.SEQBAIJ # --- class TestMatFactorD1(BaseTestMatFactorChol, BaseTestMatFactorICC, unittest.TestCase): MKSYS = staticmethod(mksys_diag) MTYPE = PETSc.Mat.Type.SEQSBAIJ MOPTS = [PETSc.Mat.Option.IGNORE_LOWER_TRIANGULAR] class TestMatFactorD2(BaseTestMatFactorChol, BaseTestMatFactorICC, unittest.TestCase): MKSYS = staticmethod(mksys_poi2) MTYPE = PETSc.Mat.Type.SEQSBAIJ MOPTS = [PETSc.Mat.Option.IGNORE_LOWER_TRIANGULAR] # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_optdb.py0000644000175000001440000000531012711377604017570 0ustar dalcinlusers00000000000000import unittest from petsc4py import PETSc from sys import getrefcount # -------------------------------------------------------------------- class TestOptions(unittest.TestCase): PREFIX = 'myopts-' OPTLIST = [('bool', True), ('int', -7), ('real', 5), ('scalar', 3), ('string', 'petsc4py'), ] def _putopts(self, opts=None, OPTLIST=None): if opts is None: opts = self.opts if OPTLIST is None: OPTLIST = self.OPTLIST for k,v in OPTLIST: opts[k] = v def _delopts(self, opts=None, OPTLIST=None): if opts is None: opts = self.opts if OPTLIST is None: OPTLIST = self.OPTLIST for k,v in OPTLIST: del opts[k] def setUp(self): self.opts = PETSc.Options(self.PREFIX) def tearDown(self): self.opts = None def testHasOpts(self): self._putopts() for k, v in self.OPTLIST: self.assertTrue(self.opts.hasName(k)) self.assertTrue(k in self.opts) missing = k+'-missing' self.assertFalse(self.opts.hasName(missing)) self.assertFalse(missing in self.opts) self._delopts() def testGetOpts(self): self._putopts() for k, v in self.OPTLIST: getopt = getattr(self.opts, 'get'+k.title()) self.assertEqual(getopt(k), v) self._delopts() def testGetAll(self): self._putopts() allopts = self.opts.getAll() self.assertTrue(type(allopts) is dict) optlist = [(k, str(v).lower()) for (k,v) in self.OPTLIST] for k,v in allopts.items(): self.assertTrue((k, v) in optlist) self._delopts() def testGetAllQuoted(self): dct = {'o0' : '"0 1 2"', 'o1' : '"a b c"', 'o2' : '"x y z"',} for k in dct: self.opts[k] = dct[k] allopts = self.opts.getAll() for k in dct: self.assertEqual(allopts[k], dct[k][1:-1]) del self.opts[k] def testMonitor(self): optlist = [] mon = lambda n,v: optlist.append((n,v)) self.opts.setMonitor(mon) self.assertEqual(getrefcount(mon)-1, 2) self._putopts() target = [(self.PREFIX+k, str(v).lower()) for k, v in self.OPTLIST] self.assertEqual(optlist, target) self.opts.cancelMonitor() self.assertEqual(getrefcount(mon)-1, 1) self._delopts() # -------------------------------------------------------------------- del TestOptions.testMonitor # XXX if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_lgmap.py0000644000175000001440000001067712711377604017574 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest # -------------------------------------------------------------------- class BaseTestLGMap(object): def _mk_idx(self, comm): comm_size = comm.getSize() comm_rank = comm.getRank() lsize = 10 first = lsize * comm_rank last = first + lsize if comm_rank > 0: first -= 1 if comm_rank < (comm_size-1): last += 1 return list(range(first, last)) def tearDown(self): self.lgmap = None def testGetSize(self): size = self.lgmap.getSize() self.assertTrue(size >= 0) def testGetIndices(self): size = self.lgmap.getSize() idx = self.lgmap.getIndices() self.assertEqual(len(idx), size) for i, val in enumerate(self.idx): self.assertEqual(idx[i], val) def testGetInfo(self): info = self.lgmap.getInfo() self.assertEqual(type(info), dict) if self.lgmap.getComm().getSize() == 1: self.assertEqual(info, {}) else: self.assertTrue(len(info) > 1) self.assertTrue(len(info) < 4) def testApply(self): idxin = list(range(self.lgmap.getSize())) idxout = self.lgmap.apply(idxin) self.lgmap.apply(idxin, idxout) invmap = self.lgmap.applyInverse(idxout) def testApplyIS(self): is_in = PETSc.IS().createStride(self.lgmap.getSize()) is_out = self.lgmap.apply(is_in) def testProperties(self): for prop in ('size', 'indices', 'info'): self.assertTrue(hasattr(self.lgmap, prop)) # -------------------------------------------------------------------- class TestLGMap(BaseTestLGMap, unittest.TestCase): def setUp(self): self.idx = self._mk_idx(PETSc.COMM_WORLD) self.lgmap = PETSc.LGMap().create(self.idx, comm=PETSc.COMM_WORLD) class TestLGMapIS(BaseTestLGMap, unittest.TestCase): def setUp(self): self.idx = self._mk_idx(PETSc.COMM_WORLD) self.iset = PETSc.IS().createGeneral(self.idx, comm=PETSc.COMM_WORLD) self.lgmap = PETSc.LGMap().create(self.iset) def tearDown(self): self.iset = None self.lgmap = None def testSameComm(self): comm1 = self.lgmap.getComm() comm2 = self.iset.getComm() self.assertEqual(comm1, comm2) # -------------------------------------------------------------------- class TestLGMapBlock(unittest.TestCase): BS = 3 def setUp(self): comm = PETSc.COMM_WORLD comm_size = comm.getSize() comm_rank = comm.getRank() lsize = 10 first = lsize * comm_rank last = first + lsize if comm_rank > 0: first -= 1 if comm_rank < (comm_size-1): last += 1 self.idx = list(range(first, last)) bs = self.BS self.lgmap = PETSc.LGMap().create(self.idx, bs, comm=PETSc.COMM_WORLD) def tearDown(self): self.lgmap = None def testGetSize(self): size = self.lgmap.getSize() self.assertTrue(size >= 0) def testGetBlockSize(self): bs = self.lgmap.getBlockSize() self.assertEqual(bs, self.BS) def testGetBlockIndices(self): size = self.lgmap.getSize() bs = self.lgmap.getBlockSize() idx = self.lgmap.getBlockIndices() self.assertEqual(len(idx), size//bs) for i, val in enumerate(self.idx): self.assertEqual(idx[i], val) def testGetIndices(self): size = self.lgmap.getSize() bs = self.lgmap.getBlockSize() idx = self.lgmap.getIndices() self.assertEqual(len(idx), size) for i, val in enumerate(self.idx): for j in range(bs): self.assertEqual(idx[i*bs+j], val*bs+j) def testGetBlockInfo(self): info = self.lgmap.getBlockInfo() self.assertEqual(type(info), dict) if self.lgmap.getComm().getSize() == 1: self.assertEqual(info, {}) else: self.assertTrue(len(info) > 1) self.assertTrue(len(info) < 4) def testGetInfo(self): info = self.lgmap.getInfo() self.assertEqual(type(info), dict) if self.lgmap.getComm().getSize() == 1: self.assertEqual(info, {}) else: self.assertTrue(len(info) > 1) self.assertTrue(len(info) < 4) # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_mat_py.py0000644000175000001440000001634512711377604017763 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest from sys import getrefcount # -------------------------------------------------------------------- class Matrix(object): def __init__(self): pass def create(self, mat): pass def destroy(self, mat): pass class Identity(Matrix): def mult(self, mat, x, y): x.copy(y) def getDiagonal(self, mat, vd): vd.set(1) class Diagonal(Matrix): def create(self, mat): super(Diagonal,self).create(mat) mat.setUp() self.D = mat.createVecLeft() def destroy(self, mat): self.D.destroy() super(Diagonal,self).destroy(mat) def scale(self, mat, a): self.D.scale(a) def shift(self, mat, a): self.D.shift(a) def zeroEntries(self, mat): self.D.zeroEntries() def mult(self, mat, x, y): y.pointwiseMult(x, self.D) def getDiagonal(self, mat, vd): self.D.copy(vd) def setDiagonal(self, mat, vd, im): if isinstance (im, bool): addv = im if addv: self.D.axpy(1, vd) else: vd.copy(self.D) elif im == PETSc.InsertMode.INSERT_VALUES: vd.copy(self.D) elif im == PETSc.InsertMode.ADD_VALUES: self.D.axpy(1, vd) else: raise ValueError('wrong InsertMode %d'% im) def diagonalScale(self, mat, vl, vr): if vl: self.D.pointwiseMult(self.D, vl) if vr: self.D.pointwiseMult(self.D, vr) # -------------------------------------------------------------------- class TestMatrix(unittest.TestCase): COMM = PETSc.COMM_WORLD PYMOD = __name__ PYCLS = 'Matrix' def _getCtx(self): return self.A.getPythonContext() def setUp(self): N = self.N = 10 self.A = PETSc.Mat() if 0: # command line way self.A.create(self.COMM) self.A.setSizes([N,N]) self.A.setType('python') OptDB = PETSc.Options(self.A) OptDB['mat_python_type'] = '%s.%s' % (self.PYMOD,self.PYCLS) self.A.setFromOptions() self.A.setUp() del OptDB['mat_python_type'] self.assertTrue(self._getCtx() is not None) else: # python way context = globals()[self.PYCLS]() self.A.createPython([N,N], context, comm=self.COMM) self.A.setUp() self.assertTrue(self._getCtx() is context) self.assertEqual(getrefcount(context), 3) del context self.assertEqual(getrefcount(self._getCtx()), 2) def tearDown(self): ctx = self.A.getPythonContext() self.assertEqual(getrefcount(ctx), 3) self.A.destroy() # XXX self.A = None self.assertEqual(getrefcount(ctx), 2) #import gc,pprint; pprint.pprint(gc.get_referrers(ctx)) def testBasic(self): ctx = self.A.getPythonContext() self.assertTrue(self._getCtx() is ctx) self.assertEqual(getrefcount(ctx), 3) def testZeroEntries(self): f = lambda : self.A.zeroEntries() self.assertRaises(Exception, f) def testMult(self): x, y = self.A.createVecs() f = lambda : self.A.mult(x, y) self.assertRaises(Exception, f) def testMultTranspose(self): x, y = self.A.createVecs() f = lambda : self.A.multTranspose(x, y) self.assertRaises(Exception, f) def testGetDiagonal(self): d = self.A.createVecLeft() f = lambda : self.A.getDiagonal(d) self.assertRaises(Exception, f) def testSetDiagonal(self): d = self.A.createVecLeft() f = lambda : self.A.setDiagonal(d) self.assertRaises(Exception, f) def testDiagonalScale(self): x, y = self.A.createVecs() f = lambda : self.A.diagonalScale(x, y) self.assertRaises(Exception, f) class TestIdentity(TestMatrix): PYCLS = 'Identity' def testMult(self): x, y = self.A.createVecs() x.setRandom() self.A.mult(x,y) self.assertTrue(y.equal(x)) def testMultTransposeSymmKnown(self): x, y = self.A.createVecs() x.setRandom() self.A.setOption(PETSc.Mat.Option.SYMMETRIC, True) self.A.multTranspose(x,y) self.assertTrue(y.equal(x)) self.A.setOption(PETSc.Mat.Option.SYMMETRIC, False) f = lambda : self.A.multTranspose(x, y) self.assertRaises(Exception, f) def testMultTransposeNewMeth(self): x, y = self.A.createVecs() x.setRandom() AA = self.A.getPythonContext() AA.multTranspose = AA.mult self.A.multTranspose(x,y) del AA.multTranspose self.assertTrue(y.equal(x)) def testGetDiagonal(self): d = self.A.createVecLeft() o = d.duplicate() o.set(1) self.A.getDiagonal(d) self.assertTrue(o.equal(d)) class TestDiagonal(TestMatrix): PYCLS = 'Diagonal' def setUp(self): super(TestDiagonal, self).setUp() D = self.A.createVecLeft() s, e = D.getOwnershipRange() for i in range(s, e): D[i] = i+1 D.assemble() self.A.setDiagonal(D) def testZeroEntries(self): self.A.zeroEntries() D = self._getCtx().D self.assertEqual(D.norm(), 0) def testMult(self): x, y = self.A.createVecs() x.set(1) self.A.mult(x,y) self.assertTrue(y.equal(self._getCtx().D)) def testMultTransposeSymmKnown(self): x, y = self.A.createVecs() x.set(1) self.A.setOption(PETSc.Mat.Option.SYMMETRIC, True) self.A.multTranspose(x,y) self.assertTrue(y.equal(self._getCtx().D)) self.A.setOption(PETSc.Mat.Option.SYMMETRIC, False) f = lambda : self.A.multTranspose(x, y) self.assertRaises(Exception, f) def testMultTransposeNewMeth(self): x, y = self.A.createVecs() x.set(1) AA = self.A.getPythonContext() AA.multTranspose = AA.mult self.A.multTranspose(x,y) del AA.multTranspose self.assertTrue(y.equal(self._getCtx().D)) def testGetDiagonal(self): d = self.A.createVecLeft() self.A.getDiagonal(d) self.assertTrue(d.equal(self._getCtx().D)) def testSetDiagonal(self): d = self.A.createVecLeft() d.setRandom() self.A.setDiagonal(d) self.assertTrue(d.equal(self._getCtx().D)) def testDiagonalScale(self): x, y = self.A.createVecs() x.set(2) y.set(3) old = self._getCtx().D.copy() self.A.diagonalScale(x, y) D = self._getCtx().D self.assertTrue(D.equal(old*6)) def testCreateTranspose(self): A = self.A A.setOption(PETSc.Mat.Option.SYMMETRIC, True) AT = PETSc.Mat().createTranspose(A) x, y = A.createVecs() xt, yt = AT.createVecs() # y.setRandom() A.multTranspose(y, x) y.copy(xt) AT.mult(xt, yt) self.assertTrue(yt.equal(x)) # x.setRandom() A.mult(x, y) x.copy(yt) AT.multTranspose(yt, xt) self.assertTrue(xt.equal(y)) del A # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_dmshell.py0000644000175000001440000001741512711377604020121 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest import numpy as np class TestDMShell(unittest.TestCase): COMM = PETSc.COMM_WORLD def setUp(self): self.dm = PETSc.DMShell().create(comm=self.COMM) def tearDown(self): self.dm = None def testSetGlobalVector(self): vec = PETSc.Vec().create(comm=self.COMM) vec.setSizes((10, None)) vec.setUp() self.dm.setGlobalVector(vec) gvec = self.dm.createGlobalVector() self.assertEqual(vec.getSizes(), gvec.getSizes()) self.assertEqual(vec.comm, gvec.comm) def testSetCreateGlobalVector(self): def create_vec(dm): v = PETSc.Vec().create(comm=dm.comm) v.setSizes((10, None)) v.setUp() return v self.dm.setCreateGlobalVector(create_vec) gvec = self.dm.createGlobalVector() self.assertEqual(gvec.comm, self.dm.comm) self.assertEqual(gvec.getLocalSize(), 10) def testSetLocalVector(self): vec = PETSc.Vec().create(comm=PETSc.COMM_SELF) vec.setSizes((1 + 10*self.COMM.rank, None)) vec.setUp() self.dm.setLocalVector(vec) lvec = self.dm.createLocalVector() self.assertEqual(vec.getSizes(), lvec.getSizes()) lsize, gsize = lvec.getSizes() self.assertEqual(lsize, gsize) self.assertEqual(lvec.comm, PETSc.COMM_SELF) def testSetCreateLocalVector(self): def create_vec(dm): v = PETSc.Vec().create(comm=PETSc.COMM_SELF) v.setSizes((1 + 10*dm.comm.rank, None)) v.setUp() return v self.dm.setCreateLocalVector(create_vec) lvec = self.dm.createLocalVector() lsize, gsize = lvec.getSizes() self.assertEqual(lsize, gsize) self.assertEqual(lsize, 1 + 10*self.dm.comm.rank) self.assertEqual(lvec.comm, PETSc.COMM_SELF) def testSetMatrix(self): mat = PETSc.Mat().create(comm=self.COMM) mat.setSizes(((10, None), (2, None))) mat.setUp() mat.assemble() self.dm.setMatrix(mat) nmat = self.dm.createMatrix() self.assertEqual(nmat.getSizes(), mat.getSizes()) def testSetCreateMatrix(self): def create_mat(dm): mat = PETSc.Mat().create(comm=self.COMM) mat.setSizes(((10, None), (2, None))) mat.setUp() return mat self.dm.setCreateMatrix(create_mat) nmat = self.dm.createMatrix() self.assertEqual(nmat.getSizes(), create_mat(self.dm).getSizes()) def testGlobalToLocal(self): def begin(dm, ivec, mode, ovec): if mode == PETSc.InsertMode.INSERT_VALUES: ivec.copy(ovec) elif mode == PETSc.InsertMode.ADD_VALUES: ovec.axpy(1.0, ivec) def end(dm, ivec, mode, ovec): pass vec = PETSc.Vec().create(comm=self.COMM) vec.setSizes((10, None)) vec.setUp() vec.set(self.dm.comm.rank + 1) ovec = PETSc.Vec().create(comm=PETSc.COMM_SELF) ovec.setSizes((10, None)) ovec.setUp() self.dm.setGlobalToLocal(begin, end) self.dm.globalToLocal(vec, ovec, addv=PETSc.InsertMode.INSERT_VALUES) self.assertTrue(np.allclose(vec.getArray(), ovec.getArray())) self.dm.globalToLocal(vec, ovec, addv=PETSc.InsertMode.ADD_VALUES) self.assertTrue(np.allclose(2*vec.getArray(), ovec.getArray())) def testLocalToGlobal(self): def begin(dm, ivec, mode, ovec): if mode == PETSc.InsertMode.INSERT_VALUES: ivec.copy(ovec) elif mode == PETSc.InsertMode.ADD_VALUES: ovec.axpy(1.0, ivec) def end(dm, ivec, mode, ovec): pass vec = PETSc.Vec().create(comm=PETSc.COMM_SELF) vec.setSizes((10, None)) vec.setUp() vec.set(self.dm.comm.rank + 1) ovec = PETSc.Vec().create(comm=self.COMM) ovec.setSizes((10, None)) ovec.setUp() self.dm.setLocalToGlobal(begin, end) self.dm.localToGlobal(vec, ovec, addv=PETSc.InsertMode.INSERT_VALUES) self.assertTrue(np.allclose(vec.getArray(), ovec.getArray())) self.dm.localToGlobal(vec, ovec, addv=PETSc.InsertMode.ADD_VALUES) self.assertTrue(np.allclose(2*vec.getArray(), ovec.getArray())) def testLocalToLocal(self): def begin(dm, ivec, mode, ovec): pass def end(dm, ivec, mode, ovec): if mode == PETSc.InsertMode.INSERT_VALUES: ivec.copy(ovec) elif mode == PETSc.InsertMode.ADD_VALUES: ovec.axpy(1.0, ivec) vec = PETSc.Vec().create(comm=PETSc.COMM_SELF) vec.setSizes((10, None)) vec.setUp() vec.set(self.dm.comm.rank + 1) ovec = vec.duplicate() self.dm.setLocalToLocal(begin, end) self.dm.localToLocal(vec, ovec, addv=PETSc.InsertMode.INSERT_VALUES) self.assertTrue(np.allclose(vec.getArray(), ovec.getArray())) self.dm.localToLocal(vec, ovec, addv=PETSc.InsertMode.ADD_VALUES) self.assertTrue(np.allclose(2*vec.getArray(), ovec.getArray())) def testGlobalToLocalVecScatter(self): vec = PETSc.Vec().create() vec.setSizes((10, None)) vec.setUp() sct, ovec = PETSc.Scatter.toAll(vec) self.dm.setGlobalToLocalVecScatter(sct) self.dm.globalToLocal(vec, ovec, addv=PETSc.InsertMode.INSERT_VALUES) self.assertTrue(np.allclose(vec.getArray(), ovec.getArray())) def testGlobalToLocalVecScatter(self): vec = PETSc.Vec().create() vec.setSizes((10, None)) vec.setUp() sct, ovec = PETSc.Scatter.toAll(vec) self.dm.setGlobalToLocalVecScatter(sct) self.dm.globalToLocal(vec, ovec, addv=PETSc.InsertMode.INSERT_VALUES) self.assertTrue(np.allclose(vec.getArray(), ovec.getArray())) def testLocalToGlobalVecScatter(self): vec = PETSc.Vec().create() vec.setSizes((10, None)) vec.setUp() sct, ovec = PETSc.Scatter.toAll(vec) self.dm.setLocalToGlobalVecScatter(sct) self.dm.localToGlobal(vec, ovec, addv=PETSc.InsertMode.INSERT_VALUES) self.assertTrue(np.allclose(vec.getArray(), ovec.getArray())) def testLocalToLocalVecScatter(self): vec = PETSc.Vec().create() vec.setSizes((10, None)) vec.setUp() sct, ovec = PETSc.Scatter.toAll(vec) self.dm.setLocalToLocalVecScatter(sct) self.dm.localToLocal(vec, ovec, addv=PETSc.InsertMode.INSERT_VALUES) self.assertTrue(np.allclose(vec.getArray(), ovec.getArray())) def testCoarsenRefine(self): cdm = PETSc.DMShell().create(comm=self.COMM) def coarsen(dm, comm): return cdm def refine(dm, comm): return self.dm cdm.setRefine(refine) self.dm.setCoarsen(coarsen) coarsened = self.dm.coarsen() self.assertEqual(coarsened, cdm) refined = coarsened.refine() self.assertEqual(refined, self.dm) def testCreateInterpolation(self): mat = PETSc.Mat().create() mat.setSizes(((10, None), (10, None))) mat.setUp() vec = PETSc.Vec().create() vec.setSizes((10, None)) vec.setUp() def create_interp(dm, dmf): return mat, vec self.dm.setCreateInterpolation(create_interp) m, v = self.dm.createInterpolation(self.dm) self.assertEqual(m, mat) self.assertEqual(v, vec) def testCreateInjection(self): mat = PETSc.Mat().create() mat.setSizes(((10, None), (10, None))) mat.setUp() def create_inject(dm, dmf): return mat self.dm.setCreateInjection(create_inject) m = self.dm.createInjection(self.dm) self.assertEqual(m, mat) if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_ts.py0000644000175000001440000001630712711377604017116 0ustar dalcinlusers00000000000000import unittest from petsc4py import PETSc from sys import getrefcount # -------------------------------------------------------------------- class MyODE: """ du/dt + u**2 = 0; u0,u1,u2 = 1,2,3 """ def __init__(self): self.rhsfunction_calls = 0 self.rhsjacobian_calls = 0 self.ifunction_calls = 0 self.ijacobian_calls = 0 self.presolve_calls = 0 self.update_calls = 0 self.postsolve_calls = 0 self.monitor_calls = 0 def rhsfunction(self,ts,t,u,F): # print ('MyODE.rhsfunction()') self.rhsfunction_calls += 1 f = -(u * u) f.copy(F) def rhsjacobian(self,ts,t,u,J,P): # print ('MyODE.rhsjacobian()') self.rhsjacobian_calls += 1 P.zeroEntries() diag = -2 * u P.setDiagonal(diag) P.assemble() if J != P: J.assemble() return True # same_nz def ifunction(self,ts,t,u,du,F): # print ('MyODE.ifunction()') self.ifunction_calls += 1 f = du + u * u f.copy(F) def ijacobian(self,ts,t,u,du,a,J,P): # print ('MyODE.ijacobian()') self.ijacobian_calls += 1 P.zeroEntries() diag = a + 2 * u P.setDiagonal(diag) P.assemble() if J != P: J.assemble() return True # same_nz def monitor(self, ts, s, t, u): self.monitor_calls += 1 dt = ts.time_step ut = ts.vec_sol.norm() #prn = PETSc.Sys.Print #prn('TS: step %2d, T:%f, dT:%f, u:%f' % (s,t,dt,ut)) class BaseTestTSNonlinear(object): TYPE = None def setUp(self): self.ts = PETSc.TS().create(PETSc.COMM_SELF) eft = PETSc.TS.ExactFinalTime.STEPOVER self.ts.setExactFinalTime(eft) ptype = PETSc.TS.ProblemType.NONLINEAR self.ts.setProblemType(ptype) self.ts.setType(self.TYPE) if PETSc.ScalarType().dtype.char in 'fF': snes = self.ts.getSNES() snes.setTolerances(rtol=1e-6) def tearDown(self): self.ts = None class BaseTestTSNonlinearRHS(BaseTestTSNonlinear): def testSolveRHS(self): ts = self.ts dct = self.ts.getDict() self.assertTrue(dct is not None) self.assertTrue(type(dct) is dict) ode = MyODE() J = PETSc.Mat().create(ts.comm) J.setSizes(3); J.setFromOptions() J.setUp() u, f = J.createVecs() ts.setAppCtx(ode) ts.setRHSFunction(ode.rhsfunction, f) ts.setRHSJacobian(ode.rhsjacobian, J, J) ts.setMonitor(ode.monitor) ts.snes.ksp.pc.setType('none') T0, dT, nT = 0.00, 0.1, 10 T = T0 + nT*dT ts.setTime(T0) ts.setTimeStep(dT) ts.setDuration(T, nT) ts.setFromOptions() u[0], u[1], u[2] = 1, 2, 3 ts.solve(u) self.assertTrue(ode.rhsfunction_calls > 0) self.assertTrue(ode.rhsjacobian_calls > 0) dct = self.ts.getDict() self.assertTrue('__appctx__' in dct) self.assertTrue('__rhsfunction__' in dct) self.assertTrue('__rhsjacobian__' in dct) self.assertTrue('__monitor__' in dct) n = ode.monitor_calls ts.monitor(ts.step_number, ts.time) self.assertEqual(ode.monitor_calls, n+1) n = ode.monitor_calls ts.cancelMonitor() ts.monitor(ts.step_number, ts.time) self.assertEqual(ode.monitor_calls, n) def testFDColorRHS(self): ts = self.ts ode = MyODE() J = PETSc.Mat().create(ts.comm) J.setSizes(5); J.setType('aij') J.setPreallocationNNZ(nnz=1) u, f = J.createVecs() ts.setAppCtx(ode) ts.setRHSFunction(ode.rhsfunction, f) ts.setRHSJacobian(ode.rhsjacobian, J, J) ts.setMonitor(ode.monitor) T0, dT, nT = 0.00, 0.1, 10 T = T0 + nT*dT ts.setTime(T0) ts.setTimeStep(dT) ts.setDuration(T, nT) ts.setFromOptions() u[0], u[1], u[2] = 1, 2, 3 ts.setSolution(u) ode.rhsjacobian(ts,0,u,J,J) ts.setUp() ts.snes.setUseFD(True) ts.solve(u) def testResetAndSolveRHS(self): self.ts.reset() self.testSolveRHS() self.ts.reset() self.testSolveRHS() self.ts.reset() class BaseTestTSNonlinearI(BaseTestTSNonlinear): def testSolveI(self): ts = self.ts dct = self.ts.getDict() self.assertTrue(dct is not None) self.assertTrue(type(dct) is dict) ode = MyODE() J = PETSc.Mat().create(ts.comm) J.setSizes(3); J.setFromOptions() J.setUp() u, f = J.createVecs() ts.setAppCtx(ode) ts.setIFunction(ode.ifunction, f) ts.setIJacobian(ode.ijacobian, J, J) ts.setMonitor(ode.monitor) ts.snes.ksp.pc.setType('none') T0, dT, nT = 0.00, 0.1, 10 T = T0 + nT*dT ts.setTime(T0) ts.setTimeStep(dT) ts.setDuration(T, nT) ts.setFromOptions() u[0], u[1], u[2] = 1, 2, 3 ts.solve(u) self.assertTrue(ode.ifunction_calls > 0) self.assertTrue(ode.ijacobian_calls > 0) dct = self.ts.getDict() self.assertTrue('__appctx__' in dct) self.assertTrue('__ifunction__' in dct) self.assertTrue('__ijacobian__' in dct) self.assertTrue('__monitor__' in dct) n = ode.monitor_calls ts.monitor(ts.step_number, ts.time) self.assertEqual(ode.monitor_calls, n+1) n = ode.monitor_calls ts.cancelMonitor() ts.monitor(ts.step_number, ts.time) self.assertEqual(ode.monitor_calls, n) def testFDColorI(self): ts = self.ts ode = MyODE() J = PETSc.Mat().create(ts.comm) J.setSizes(5); J.setType('aij') J.setPreallocationNNZ(nnz=1) J.setFromOptions() u, f = J.createVecs() ts.setAppCtx(ode) ts.setIFunction(ode.ifunction, f) ts.setIJacobian(ode.ijacobian, J, J) ts.setMonitor(ode.monitor) T0, dT, nT = 0.00, 0.1, 10 T = T0 + nT*dT ts.setTime(T0) ts.setTimeStep(dT) ts.setDuration(T, nT) ts.setFromOptions() u[0], u[1], u[2] = 1, 2, 3 ts.setSolution(u) ode.ijacobian(ts,0,u,0*u,1,J,J) ts.setUp() ts.snes.setUseFD(True) ts.solve(u) def testResetAndSolveI(self): self.ts.reset() self.testSolveI() self.ts.reset() self.testSolveI() self.ts.reset() class TestTSBeuler(BaseTestTSNonlinearRHS,BaseTestTSNonlinearI, unittest.TestCase): TYPE = PETSc.TS.Type.BEULER class TestTSCN(BaseTestTSNonlinearRHS,BaseTestTSNonlinearI, unittest.TestCase): TYPE = PETSc.TS.Type.CN class TestTSTheta(BaseTestTSNonlinearRHS, BaseTestTSNonlinearI, unittest.TestCase): TYPE = PETSc.TS.Type.THETA class TestTSAlpha(BaseTestTSNonlinearRHS, BaseTestTSNonlinearI, unittest.TestCase): TYPE = PETSc.TS.Type.ALPHA # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() # -------------------------------------------------------------------- petsc4py-3.7.0/test/runtests.py0000644000175000001440000001547512711377604017325 0ustar dalcinlusers00000000000000import sys, os import optparse import unittest def getoptionparser(): parser = optparse.OptionParser() parser.add_option("-q", "--quiet", action="store_const", const=0, dest="verbose", default=1, help="do not print status messages to stdout") parser.add_option("-v", "--verbose", action="store_const", const=2, dest="verbose", default=1, help="print status messages to stdout") parser.add_option("-i", "--include", type="string", action="append", dest="include", default=[], help="include tests matching PATTERN", metavar="PATTERN") parser.add_option("-e", "--exclude", type="string", action="append", dest="exclude", default=[], help="exclude tests matching PATTERN", metavar="PATTERN") parser.add_option("-f", "--failfast", action="store_true", dest="failfast", default=False, help="Stop on first failure") parser.add_option("--no-builddir", action="store_false", dest="builddir", default=True, help="disable testing from build directory") parser.add_option("--path", type="string", action="append", dest="path", default=[], help="prepend PATH to sys.path", metavar="PATH") parser.add_option("--refleaks", type="int", action="store", dest="repeats", default=3, help="run tests REPEAT times in a loop to catch leaks", metavar="REPEAT") parser.add_option("--arch", type="string", action="store", dest="arch", default=None, help="use PETSC_ARCH", metavar="PETSC_ARCH") parser.add_option("-s","--summary", action="store_true", dest="summary", default=0, help="print PETSc log summary") return parser def getbuilddir(): from distutils.util import get_platform s = os.path.join("build", "lib.%s-%.3s" % (get_platform(), sys.version)) if hasattr(sys, 'gettotalrefcount'): s += '-pydebug' return s def setup_python(options): rootdir = os.path.dirname(os.path.dirname(__file__)) builddir = os.path.join(rootdir, getbuilddir()) if options.builddir and os.path.exists(builddir): sys.path.insert(0, builddir) if options.path: path = options.path[:] path.reverse() for p in path: sys.path.insert(0, p) def setup_unittest(options): from unittest import TestSuite try: from unittest.runner import _WritelnDecorator except ImportError: from unittest import _WritelnDecorator # writeln_orig = _WritelnDecorator.writeln def writeln(self, message=''): try: self.stream.flush() except: pass writeln_orig(self, message) try: self.stream.flush() except: pass _WritelnDecorator.writeln = writeln def import_package(options, pkgname): args=[sys.argv[0], '-malloc', '-malloc_debug', '-malloc_dump', '-log_summary', ] if not options.summary: del args[-1] package = __import__(pkgname) package.init(args, arch=options.arch) return package def getprocessorinfo(): from petsc4py.PETSc import COMM_WORLD rank = COMM_WORLD.getRank() name = os.uname()[1] return (rank, name) def getpythoninfo(): x, y = sys.version_info[:2] return ("Python %d.%d (%s)" % (x, y, sys.executable)) def getlibraryinfo(): from petsc4py import PETSc (major, minor, micro) = PETSc.Sys.getVersion() r = PETSc.Sys.getVersionInfo()['release'] if r: release = 'release' else: release = 'development' arch = PETSc.__arch__ return ("PETSc %d.%d.%d %s (conf: '%s')" % (major, minor, micro, release, arch) ) def getpackageinfo(pkg): return ("%s %s (%s)" % (pkg.__name__, pkg.__version__, pkg.__path__[0])) def writeln(message='', endl='\n'): from petsc4py.PETSc import Sys Sys.syncPrint(message, endl=endl, flush=True) def print_banner(options, package): r, n = getprocessorinfo() fmt = "[%d@%s] %s" if options.verbose: writeln(fmt % (r, n, getpythoninfo())) writeln(fmt % (r, n, getlibraryinfo())) writeln(fmt % (r, n, getpackageinfo(package))) def load_tests(options, args): from glob import glob import re testsuitedir = os.path.dirname(__file__) sys.path.insert(0, testsuitedir) pattern = 'test_*.py' wildcard = os.path.join(testsuitedir, pattern) testfiles = glob(wildcard) testfiles.sort() testsuite = unittest.TestSuite() testloader = unittest.TestLoader() include = exclude = None if options.include: include = re.compile('|'.join(options.include)).search if options.exclude: exclude = re.compile('|'.join(options.exclude)).search for testfile in testfiles: filename = os.path.basename(testfile) testname = os.path.splitext(filename)[0] if ((exclude and exclude(testname)) or (include and not include(testname))): continue module = __import__(testname) for arg in args: try: cases = testloader.loadTestsFromNames((arg,), module) testsuite.addTests(cases) except AttributeError: pass if not args: cases = testloader.loadTestsFromModule(module) testsuite.addTests(cases) return testsuite def run_tests(options, testsuite): runner = unittest.TextTestRunner(verbosity=options.verbose) runner.failfast = options.failfast result = runner.run(testsuite) return result.wasSuccessful() def run_tests_leaks(options, testsuite): from sys import gettotalrefcount from gc import collect rank, name = getprocessorinfo() r1 = r2 = 0 repeats = options.repeats while repeats: repeats -= 1 collect() r1 = gettotalrefcount() run_tests(options, testsuite) collect() r2 = gettotalrefcount() writeln('[%d@%s] refleaks: (%d - %d) --> %d' % (rank, name, r2, r1, r2-r1)) def main(args=None): pkgname = 'petsc4py' parser = getoptionparser() (options, args) = parser.parse_args(args) setup_python(options) setup_unittest(options) package = import_package(options, pkgname) print_banner(options, package) testsuite = load_tests(options, args) success = run_tests(options, testsuite) if success and hasattr(sys, 'gettotalrefcount'): run_tests_leaks(options, testsuite) return not success if __name__ == '__main__': import sys sys.dont_write_bytecode = True sys.exit(main()) petsc4py-3.7.0/test/test_dmda.py0000644000175000001440000003265112711377604017375 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest # -------------------------------------------------------------------- class BaseTestDA(object): COMM = PETSc.COMM_WORLD SIZES = None BOUNDARY = None DOF = 1 STENCIL = PETSc.DMDA.StencilType.STAR SWIDTH = 1 def setUp(self): self.da = PETSc.DMDA().create(dim=len(self.SIZES), dof=self.DOF, sizes=self.SIZES, boundary_type=self.BOUNDARY, stencil_type=self.STENCIL, stencil_width=self.SWIDTH, comm=self.COMM) def tearDown(self): self.da = None def testGetInfo(self): dim = self.da.getDim() dof = self.da.getDof() sizes = self.da.getSizes() psizes = self.da.getProcSizes() boundary = self.da.getBoundaryType() stencil_type = self.da.getStencilType() stencil_width = self.da.getStencilWidth() self.assertEqual(dim, len(self.SIZES)) self.assertEqual(dof, self.DOF) self.assertEqual(sizes, tuple(self.SIZES)) self.assertEqual(boundary, self.BOUNDARY or (0,)*dim) self.assertEqual(stencil_type, self.STENCIL) self.assertEqual(stencil_width, self.SWIDTH) def testRangesCorners(self): dim = self.da.getDim() ranges = self.da.getRanges() starts, lsizes = self.da.getCorners() self.assertEqual(dim, len(ranges)) self.assertEqual(dim, len(starts)) self.assertEqual(dim, len(lsizes)) for i in range(dim): s, e = ranges[i] self.assertEqual(s, starts[i]) self.assertEqual(e-s, lsizes[i]) def testGhostRangesCorners(self): dim = self.da.getDim() ranges = self.da.getGhostRanges() starts, lsizes = self.da.getGhostCorners() self.assertEqual(dim, len(ranges)) self.assertEqual(dim, len(starts)) self.assertEqual(dim, len(lsizes)) for i in range(dim): s, e = ranges[i] self.assertEqual(s, starts[i]) self.assertEqual(e-s, lsizes[i]) def testOwnershipRanges(self): dim = self.da.getDim() ownership_ranges = self.da.getOwnershipRanges() procsizes = self.da.getProcSizes() self.assertEqual(len(procsizes), len(ownership_ranges)) for i,m in enumerate(procsizes): self.assertEqual(m, len(ownership_ranges[i])) def testFieldName(self): for i in range(self.da.getDof()): self.da.setFieldName(i, "field%d" % i) for i in range(self.da.getDof()): name = self.da.getFieldName(i) self.assertEqual(name, "field%d" % i) def testCoordinates(self): self.da.setUniformCoordinates(0,1,0,1,0,1) # c = self.da.getCoordinates() self.da.setCoordinates(c) c.destroy() cda = self.da.getCoordinateDM() cda.destroy() # c = self.da.getCoordinates() self.da.setCoordinates(c) c.destroy() gc = self.da.getCoordinatesLocal() gc.destroy() def testCreateVecMat(self): vn = self.da.createNaturalVec() vg = self.da.createGlobalVec() vl = self.da.createLocalVec() mat = self.da.createMat() self.assertTrue(mat.getType() in ('aij', 'seqaij', 'mpiaij')) vn.set(1.0) self.da.naturalToGlobal(vn,vg) self.assertEqual(vg.max()[1], 1.0) self.assertEqual(vg.min()[1], 1.0) self.da.globalToLocal(vg,vl) self.assertEqual(vl.max()[1], 1.0) self.assertTrue (vl.min()[1] in (1.0, 0.0)) vn.set(0.0) self.da.globalToNatural(vg,vn) self.assertEqual(vn.max()[1], 1.0) self.assertEqual(vn.min()[1], 1.0) vl2 = self.da.createLocalVec() self.da.localToLocal(vl,vl2) self.assertEqual(vl2.max()[1], 1.0) self.assertTrue (vl2.min()[1] in (1.0, 0.0)) NONE = PETSc.DM.BoundaryType.NONE s = self.da.stencil_width btype = self.da.boundary_type psize = self.da.proc_sizes for b, p in zip(btype, psize): if b != NONE and p == 1: return vg2 = self.da.createGlobalVec() self.da.localToGlobal(vl2,vg2) def testGetOther(self): ao = self.da.getAO() lgmap = self.da.getLGMap() l2g, g2l = self.da.getScatter() def testRefineCoarsen(self): da = self.da rda = da.refine() self.assertEqual(da.getDim(), rda.getDim()) self.assertEqual(da.getDof(), rda.getDof()) if da.dim != 1: self.assertEqual(da.getStencilType(), rda.getStencilType()) self.assertEqual(da.getStencilWidth(), rda.getStencilWidth()) cda = rda.coarsen() self.assertEqual(rda.getDim(), cda.getDim()) self.assertEqual(rda.getDof(), cda.getDof()) for n1, n2 in zip(self.da.getSizes(), cda.getSizes()): self.assertTrue(abs(n1-n2)<=1) def testCoarsenRefine(self): da = self.da cda = self.da.coarsen() self.assertEqual(da.getDim(), cda.getDim()) self.assertEqual(da.getDof(), cda.getDof()) if da.dim != 1: self.assertEqual(da.getStencilType(), cda.getStencilType()) self.assertEqual(da.getStencilWidth(), cda.getStencilWidth()) rda = cda.refine() for n1, n2 in zip(self.da.getSizes(), rda.getSizes()): self.assertTrue(abs(n1-n2)<=1) def testRefineHierarchy(self): levels = self.da.refineHierarchy(2) self.assertTrue(isinstance(levels, list)) self.assertEqual(len(levels), 2) for item in levels: self.assertTrue(isinstance(item, PETSc.DM)) def testCoarsenHierarchy(self): levels = self.da.coarsenHierarchy(2) self.assertTrue(isinstance(levels, list)) self.assertEqual(len(levels), 2) for item in levels: self.assertTrue(isinstance(item, PETSc.DM)) def testCreateInterpolation(self): da = self.da if da.dim == 1: return rda = da.refine() mat, vec = da.createInterpolation(rda) def testCreateInjection(self): da = self.da if da.dim == 1: return rda = da.refine() scatter = da.createInjection(rda) def testCreateAggregates(self): da = self.da if da.dim == 1: return rda = da.refine() mat = da.createAggregates(rda) MIRROR = PETSc.DMDA.BoundaryType.MIRROR GHOSTED = PETSc.DMDA.BoundaryType.GHOSTED PERIODIC = PETSc.DMDA.BoundaryType.PERIODIC TWIST = PETSc.DMDA.BoundaryType.TWIST SCALE = 4 class BaseTestDA_1D(BaseTestDA): SIZES = [100*SCALE] class BaseTestDA_2D(BaseTestDA): SIZES = [9*SCALE,11*SCALE] class BaseTestDA_3D(BaseTestDA): SIZES = [6*SCALE,7*SCALE,8*SCALE] # -------------------------------------------------------------------- class TestDA_1D(BaseTestDA_1D, unittest.TestCase): pass class TestDA_1D_W0(TestDA_1D): SWIDTH = 0 class TestDA_1D_W2(TestDA_1D): SWIDTH = 2 class TestDA_2D(BaseTestDA_2D, unittest.TestCase): pass class TestDA_2D_W0(TestDA_2D): SWIDTH = 0 class TestDA_2D_W0_N2(TestDA_2D): DOF = 2 SWIDTH = 0 class TestDA_2D_W2(TestDA_2D): SWIDTH = 2 class TestDA_2D_W2_N2(TestDA_2D): DOF = 2 SWIDTH = 2 class TestDA_2D_PXY(TestDA_2D): DOF = 2 SWIDTH = 5 BOUNDARY = (PERIODIC,)*2 class TestDA_2D_GXY(TestDA_2D): DOF = 2 SWIDTH = 5 BOUNDARY = (GHOSTED,)*2 class TestDA_2D_TXY(TestDA_2D): DOF = 2 SWIDTH = 5 BOUNDARY = (TWIST,)*2 class TestDA_3D(BaseTestDA_3D, unittest.TestCase): pass class TestDA_3D_W0(TestDA_3D): SWIDTH = 0 class TestDA_3D_W0_N2(TestDA_3D): DOF = 2 SWIDTH = 0 class TestDA_3D_W2(TestDA_3D): SWIDTH = 2 class TestDA_3D_W2_N2(TestDA_3D): DOF = 2 SWIDTH = 2 class TestDA_3D_PXYZ(TestDA_3D): DOF = 2 SWIDTH = 3 BOUNDARY = (PERIODIC,)*3 class TestDA_3D_GXYZ(TestDA_3D): DOF = 2 SWIDTH = 3 BOUNDARY = (GHOSTED,)*3 class TestDA_3D_TXYZ(TestDA_3D): DOF = 2 SWIDTH = 3 BOUNDARY = (TWIST,)*3 # -------------------------------------------------------------------- DIM = (1,2,3,) DOF = (None,1,2,3,4,5,) BOUNDARY_TYPE = ( None, "none", (0,)*3, 0, "ghosted", (GHOSTED,)*3, GHOSTED, "periodic", (PERIODIC,)*3, PERIODIC, "twist", (TWIST,)*3, TWIST, ) STENCIL_TYPE = (None,"star","box") STENCIL_WIDTH = (None,0,1,2,3) DIM = (1,2,3) DOF = (None,2,5) BOUNDARY_TYPE = (None,"none","periodic","ghosted","twist") STENCIL_TYPE = (None,"box") STENCIL_WIDTH = (None,1,2) class TestDACreate(unittest.TestCase): pass counter = 0 for dim in DIM: for dof in DOF: for boundary in BOUNDARY_TYPE: if isinstance(boundary, tuple): boundary = boundary[:dim] for stencil in STENCIL_TYPE: for width in STENCIL_WIDTH: kargs = dict(sizes=[8*SCALE]*dim, dim=dim, dof=dof, boundary_type=boundary, stencil_type=stencil, stencil_width=width) def testCreate(self, kargs=kargs): kargs = dict(kargs) da = PETSc.DMDA().create(**kargs) da.destroy() setattr(TestDACreate, "testCreate%04d"%counter, testCreate) del testCreate, kargs counter += 1 del counter, dim, dof, boundary, stencil, width class TestDADuplicate(unittest.TestCase): pass counter = 0 for dim in DIM: for dof in DOF: for boundary in BOUNDARY_TYPE: if isinstance(boundary, tuple): boundary = boundary[:dim] for stencil in STENCIL_TYPE: for width in STENCIL_WIDTH: kargs = dict(dim=dim, dof=dof, boundary_type=boundary, stencil_type=stencil, stencil_width=width) def testDuplicate(self, kargs=kargs): kargs = dict(kargs) dim = kargs.pop('dim') dof = kargs['dof'] boundary = kargs['boundary_type'] stencil = kargs['stencil_type'] width = kargs['stencil_width'] da = PETSc.DMDA().create([8*SCALE]*dim) newda = da.duplicate(**kargs) self.assertEqual(newda.dim, da.dim) self.assertEqual(newda.sizes, da.sizes) self.assertEqual(newda.proc_sizes, da.proc_sizes) self.assertEqual(newda.ranges, da.ranges) self.assertEqual(newda.corners, da.corners) if (newda.boundary_type == da.boundary_type and newda.stencil_width == da.stencil_width): self.assertEqual(newda.ghost_ranges, da.ghost_ranges) self.assertEqual(newda.ghost_corners, da.ghost_corners) if dof is None: dof = da.dof if boundary is None: boundary = da.boundary_type elif boundary == "none": boundary = (0,) * dim elif boundary == "mirror": boundary = (MIRROR,) * dim elif boundary == "ghosted": boundary = (GHOSTED,) * dim elif boundary == "periodic": boundary = (PERIODIC,) * dim elif boundary == "twist": boundary = (TWIST,) * dim elif isinstance(boundary, int): boundary = (boundary,) * dim if stencil is None: stencil = da.stencil[0] if width is None: width = da.stencil_width self.assertEqual(newda.dof, dof) self.assertEqual(newda.boundary_type, boundary) if dim == 1: self.assertEqual(newda.stencil, (stencil, width)) newda.destroy() da.destroy() setattr(TestDADuplicate, "testDuplicate%04d"%counter, testDuplicate) del testDuplicate, kargs counter += 1 del counter, dim, dof, boundary, stencil, width # -------------------------------------------------------------------- if PETSc.COMM_WORLD.getSize() > 1: del TestDA_1D_W0 del TestDA_2D_W0, TestDA_2D_W0_N2 del TestDA_3D_W0, TestDA_3D_W0_N2 # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() # -------------------------------------------------------------------- petsc4py-3.7.0/test/test_vec.py0000644000175000001440000002233312711377604017241 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest # -------------------------------------------------------------------- class BaseTestVec(object): COMM = None TYPE = None def setUp(self): v = PETSc.Vec() v.create(self.COMM) v.setSizes(100) v.setType(self.TYPE) self.vec = v def tearDown(self): self.vec.destroy() self.vec = None def testDuplicate(self): self.vec.set(1) vec = self.vec.duplicate() self.assertFalse(self.vec.equal(vec)) self.assertEqual(self.vec.sizes, vec.sizes) del vec def testCopy(self): self.vec.set(1) vec = self.vec.duplicate() self.vec.copy(vec) self.assertTrue(self.vec.equal(vec)) del vec def testDot(self): self.vec.set(1) d = self.vec.dot(self.vec) self.assertAlmostEqual(abs(d), self.vec.getSize()) self.vec.dotBegin(self.vec) d = self.vec.dotEnd(self.vec) self.assertAlmostEqual(abs(d), self.vec.getSize()) def testNorm(self): from math import sqrt self.vec.set(1) n1 = self.vec.norm(PETSc.NormType.NORM_1) n2 = self.vec.norm(PETSc.NormType.NORM_2) ni = self.vec.norm(PETSc.NormType.NORM_INFINITY) self.assertAlmostEqual(n1, self.vec.getSize()) self.assertAlmostEqual(n2, sqrt(self.vec.getSize())) self.assertAlmostEqual(n2, self.vec.norm()) self.assertAlmostEqual(ni, 1.0) self.vec.normBegin(PETSc.NormType.NORM_1) nn1 = self.vec.normEnd(PETSc.NormType.NORM_1) self.assertAlmostEqual(nn1, n1) self.vec.normBegin() nn2 = self.vec.normEnd() self.assertAlmostEqual(nn2, n2) self.vec.normBegin(PETSc.NormType.NORM_INFINITY) nni = self.vec.normEnd(PETSc.NormType.NORM_INFINITY) self.assertAlmostEqual(nni, ni) def testNormalize(self): from math import sqrt self.vec.set(1) n2 = self.vec.normalize() self.assertAlmostEqual(n2, sqrt(self.vec.getSize())) self.assertAlmostEqual(1, self.vec.norm()) def testSumMinMax(self): self.vec.set(1) self.assertEqual(self.vec.sum(), self.vec.getSize()) self.vec.set(-7) self.assertEqual(self.vec.min()[1], -7) self.vec.set(10) self.assertEqual(self.vec.max()[1], 10) def testSwap(self): v1 = self.vec v2 = v1.duplicate() v1.set(1) v2.set(2) v1.swap(v2) idx, _ = self.vec.getOwnershipRange() self.assertEqual(v1[idx], 2) self.assertEqual(v2[idx], 1) def testBsize(self): self.vec.setBlockSize(1) self.assertEqual(self.vec.getBlockSize(), 1) self.vec.setBlockSize(1) def testGetSetVals(self): start, end = self.vec.getOwnershipRange() self.vec[start] = -7 self.vec[end-1] = -7 self.assertEqual(self.vec[start], -7) self.assertEqual(self.vec[end-1], -7) for i in range(start, end): self.vec[i] = i values = [self.vec[i] for i in range(start, end)] self.assertEqual(values, list(range(start, end))) sz = self.vec.getSize() self.assertEqual(self.vec.sum(), (sz-1)/2.0*sz) def testGetSetValsBlocked(self): return lsize, gsize = self.vec.getSizes() start, end = self.vec.getOwnershipRange() bsizes = list(range(1, lsize+1)) nblocks = list(range(1, lsize+1)) compat = [(bs, nb) for bs in bsizes if not (gsize%bs or lsize % bs) for nb in nblocks if bs*nb <= lsize] for bsize, nblock in compat: self.vec.setBlockSize(bsize) bindex = [start//bsize+i for i in range(nblock)] bvalue = [float(i) for i in range(nblock*bsize)] self.vec.setValuesBlocked(bindex, bvalue) self.vec.assemble() index = [start+i for i in range(nblock*bsize)] value = self.vec.getValues(index) self.assertEqual(bvalue, list(value)) def testGetSetArray(self): self.vec.set(1) arr0 = self.vec.getArray().copy() self.assertEqual(arr0.sum(), self.vec.getLocalSize()) arr0 = self.vec.getArray().copy() self.vec.setRandom() arr1 = self.vec.getArray().copy() self.vec.setArray(arr1) arr1 = self.vec.getArray().copy() arr2 = self.vec.getArray().copy() self.assertTrue((arr1 == arr2).all()) import numpy refs = self.vec.getRefCount() arr3 = numpy.asarray(self.vec) self.assertEqual(self.vec.getRefCount(), refs+1) self.assertTrue((arr1 == arr3).all()) arr3[:] = 0 self.assertAlmostEqual(abs(self.vec.sum()), 0) self.assertEqual(self.vec.max()[1], 0) self.assertEqual(self.vec.min()[1], 0) self.vec.set(1) self.assertAlmostEqual(abs(arr3.sum()), self.vec.getLocalSize()) self.assertEqual(arr3.min(), 1) self.assertEqual(arr3.max(), 1) del arr3 self.assertEqual(self.vec.getRefCount(), refs) def testPlaceArray(self): self.vec.set(1) array = self.vec.getArray().copy() self.vec.placeArray(array) array[:] = 2 self.assertAlmostEqual(abs(self.vec.sum()), 2*self.vec.getSize()) self.vec.resetArray() self.assertAlmostEqual(abs(self.vec.sum()), self.vec.getSize()) def testSetOption(self): opt1 = PETSc.Vec.Option.IGNORE_OFF_PROC_ENTRIES opt2 = PETSc.Vec.Option.IGNORE_NEGATIVE_INDICES for opt in [opt1, opt2]*2: for flag in [True,False]*2: self.vec.setOption(opt,flag) def testGetSetItem(self): v = self.vec w = v.duplicate() # v[...] = 7 self.assertEqual(v.max()[1], 7) self.assertEqual(v.min()[1], 7) # v.setRandom() w[...] = v self.assertTrue(w.equal(v)) # v.setRandom() w[...] = v.getArray() self.assertTrue(w.equal(v)) # s, e = v.getOwnershipRange() v.setRandom() w[s:e] = v.getArray().copy() self.assertTrue(w.equal(v)) w1, v1 = w[s], v[s] w2, v2 = w[e-1], v[e-1] self.assertEqual(w1, v1) self.assertEqual(w2, v2) def testMAXPY(self): y = self.vec y.set(1) x = [y.copy() for _ in range(3)] a = [1]*len(x) y.maxpy(a, x) z = y.duplicate() z.set(len(x)+1) assert (y.equal(z)) # -------------------------------------------------------------------- class TestVecSeq(BaseTestVec, unittest.TestCase): COMM = PETSc.COMM_SELF TYPE = PETSc.Vec.Type.SEQ class TestVecMPI(BaseTestVec, unittest.TestCase): COMM = PETSc.COMM_WORLD TYPE = PETSc.Vec.Type.MPI class TestVecShared(BaseTestVec, unittest.TestCase): if PETSc.COMM_WORLD.getSize() == 1: TYPE = PETSc.Vec.Type.SHARED else: TYPE = PETSc.Vec.Type.MPI COMM = PETSc.COMM_WORLD #class TestVecSieve(BaseTestVec, unittest.TestCase): # CLASS = PETSc.VecSieve # TARGS = ([],) #class TestVecGhost(BaseTestVec, unittest.TestCase): # CLASS = PETSc.VecGhost # TARGS = ([],) # -------------------------------------------------------------------- class TestVecWithArray(unittest.TestCase): def testCreateSeq(self): import numpy a = numpy.zeros(5, dtype=PETSc.ScalarType) v1 = PETSc.Vec().createWithArray(a, comm=PETSc.COMM_SELF) v2 = PETSc.Vec().createWithArray(a, size=5, comm=PETSc.COMM_SELF) v3 = PETSc.Vec().createWithArray(a, size=3, comm=PETSc.COMM_SELF) self.assertTrue(v1.size == 5) self.assertTrue(v2.size == 5) self.assertTrue(v3.size == 3) a1 = v1.getDict()['__array__']; self.assertTrue(a is a1) a2 = v2.getDict()['__array__']; self.assertTrue(a is a2) a3 = v3.getDict()['__array__']; self.assertTrue(a is a2) def testCreateMPI(self): import numpy a = numpy.zeros(5, dtype=PETSc.ScalarType) v1 = PETSc.Vec().createWithArray(a, comm=PETSc.COMM_WORLD) v2 = PETSc.Vec().createWithArray(a, size=(5,None), comm=PETSc.COMM_WORLD) v3 = PETSc.Vec().createWithArray(a, size=(3,None), comm=PETSc.COMM_WORLD) self.assertTrue(v1.local_size == 5) self.assertTrue(v2.local_size == 5) self.assertTrue(v3.local_size == 3) a1 = v1.getDict()['__array__']; self.assertTrue(a is a1) a2 = v2.getDict()['__array__']; self.assertTrue(a is a2) a3 = v3.getDict()['__array__']; self.assertTrue(a is a2) def testSetMPIGhost(self): import numpy v = PETSc.Vec().create() v.setType(PETSc.Vec.Type.MPI) v.setSizes((5,None)) ghosts = [i % v.size for i in range(v.owner_range[1],v.owner_range[1]+3)] v.setMPIGhost(ghosts) v.setArray(numpy.array(range(*v.owner_range))) v.ghostUpdate() with v.localForm() as loc: self.assertTrue((loc[0:v.local_size] == range(*v.owner_range)).all()) self.assertTrue((loc[v.local_size:] == ghosts).all()) # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() # -------------------------------------------------------------------- petsc4py-3.7.0/test/test_ts_py.py0000644000175000001440000001114112711377604017615 0ustar dalcinlusers00000000000000import unittest from petsc4py import PETSc from sys import getrefcount import gc # -------------------------------------------------------------------- class MyODE: """ du/dt + u**2 = 0; u0 = 1 """ def __init__(self): self.function_calls = 0 self.jacobian_calls = 0 def function(self,ts,t,u,du,F): #print 'MyODE.function()' self.function_calls += 1 f = du + u * u f.copy(F) def jacobian(self,ts,t,u,du,a,J,P): #print 'MyODE.jacobian()' self.jacobian_calls += 1 P.zeroEntries() diag = a + 2 * u P.setDiagonal(diag) P.assemble() if J != P: J.assemble() return False # same_nz class MyTS: def __init__(self): self.log = {} def _log(self, method, *args): self.log.setdefault(method, 0) self.log[method] += 1 def create(self, ts, *args): self._log('create', *args) self.vec_update = PETSc.Vec() def destroy(self, ts, *args): self._log('destroy', *args) self.vec_update.destroy() def setFromOptions(self, ts, *args): self._log('setFromOptions', *args) def setUp(self, ts, *args): self._log('setUp', ts, *args) self.vec_update = ts.getSolution().duplicate() def reset(self, ts, *args): self._log('reset', ts, *args) def solveStep(self, ts, t, u, *args): self._log('solveStep', ts, t, u, *args) ts.snes.solve(None, u) def adaptStep(self, ts, t, u, *args): self._log('adaptStep', ts, t, u, *args) return (ts.getTimeStep(), True) class TestTSPython(unittest.TestCase): def setUp(self): self.ts = PETSc.TS() self.ts.createPython(MyTS(), comm=PETSc.COMM_SELF) eft = PETSc.TS.ExactFinalTime.STEPOVER self.ts.setExactFinalTime(eft) ctx = self.ts.getPythonContext() self.assertEqual(getrefcount(ctx), 3) self.assertEqual(ctx.log['create'], 1) self.nsolve = 0 def tearDown(self): ctx = self.ts.getPythonContext() self.assertEqual(getrefcount(ctx), 3) self.assertTrue('destroy' not in ctx.log) self.ts.destroy() # XXX self.ts = None self.assertEqual(ctx.log['destroy'], 1) self.assertEqual(getrefcount(ctx), 2) def testSolve(self): ts = self.ts ts.setProblemType(ts.ProblemType.NONLINEAR) ode = MyODE() J = PETSc.Mat().create(ts.comm) J.setSizes(3); J.setFromOptions() J.setUp() u, f = J.createVecs() ts.setAppCtx(ode) ts.setIFunction(ode.function, f) ts.setIJacobian(ode.jacobian, J, J) ts.snes.ksp.pc.setType('none') T0, dT, nT = 0.0, 0.1, 10 T = T0 + nT*dT ts.setTime(T0) ts.setTimeStep(dT) ts.setMaxTime(T) ts.setMaxSteps(nT) ts.setDuration(T, nT) ts.setFromOptions() u[0], u[1], u[2] = 1, 2, 3 ts.solve(u) self.nsolve +=1 self.assertTrue(ode.function_calls > 0) self.assertTrue(ode.jacobian_calls > 0) ctx = self.ts.getPythonContext() ncalls = self.nsolve * ts.step_number self.assertTrue(ctx.log['solveStep'] == ncalls) self.assertTrue(ctx.log['adaptStep'] == ncalls) del ctx dct = self.ts.getDict() self.assertTrue('__appctx__' in dct) self.assertTrue('__ifunction__' in dct) self.assertTrue('__ijacobian__' in dct) def testFDColor(self): # ts = self.ts ts.setProblemType(ts.ProblemType.NONLINEAR) ode = MyODE() J = PETSc.Mat().create(ts.comm) J.setSizes(5); J.setType('aij'); J.setPreallocationNNZ(1) J.setFromOptions() u, f = J.createVecs() ts.setAppCtx(ode) ts.setIFunction(ode.function, f) ts.setIJacobian(ode.jacobian, J, J) T0, dT, nT = 0.00, 0.1, 10 T = T0 + nT*dT ts.setTime(T0) ts.setTimeStep(dT) ts.setDuration(T, nT) ts.setFromOptions() u[:] = 1, 2, 3, 4, 5 ts.setSolution(u) ode.jacobian(ts,0.0,u,u,1.0,J,J) ts.snes.setUseFD(True) ts.solve(u) self.nsolve +=1 def testResetAndSolve(self): self.ts.reset() self.testSolve() self.ts.reset() self.testFDColor() self.ts.reset() self.testSolve() self.ts.reset() # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() # -------------------------------------------------------------------- petsc4py-3.7.0/test/test_tao.py0000644000175000001440000000332012711377604017242 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- from petsc4py import PETSc import unittest # -------------------------------------------------------------------- class BaseTestTAO(object): COMM = None def setUp(self): self.tao = PETSc.TAO().create(comm=self.COMM) def tearDown(self): self.tao = None def testSetRoutinesToNone(self): tao = self.tao objective, gradient, objgrad = None, None, None constraint, varbounds = None, None hessian, jacobian = None, None tao.setObjective(objective) tao.setGradient(gradient) tao.setVariableBounds(varbounds) tao.setObjectiveGradient(objgrad) tao.setConstraints(constraint) tao.setHessian(hessian) tao.setJacobian(jacobian) def testGetVecsAndMats(self): tao = self.tao x = tao.getSolution() g = tao.getGradient() l, u = tao.getVariableBounds() r = None#tao.getConstraintVec() H, HP = None,None#tao.getHessianMat() J, JP = None,None#tao.getJacobianMat() for o in [x, g, r, l, u ,H, HP, J, JP,]: self.assertFalse(o) def testGetKSP(self): ksp = self.tao.getKSP() self.assertFalse(ksp) # -------------------------------------------------------------------- class TestTAOSelf(BaseTestTAO, unittest.TestCase): COMM = PETSc.COMM_SELF class TestTAOWorld(BaseTestTAO, unittest.TestCase): COMM = PETSc.COMM_WORLD # -------------------------------------------------------------------- import numpy if numpy.iscomplexobj(PETSc.ScalarType()): del BaseTestTAO del TestTAOSelf del TestTAOWorld if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_ksp.py0000644000175000001440000001535512711377604017267 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- from petsc4py import PETSc import unittest from sys import getrefcount # -------------------------------------------------------------------- class BaseTestKSP(object): KSP_TYPE = None PC_TYPE = None def setUp(self): ksp = PETSc.KSP() ksp.create(PETSc.COMM_SELF) if self.KSP_TYPE: ksp.setType(self.KSP_TYPE) if self.PC_TYPE: pc = ksp.getPC() pc.setType(self.PC_TYPE) self.ksp = ksp def tearDown(self): self.ksp = None def testGetSetType(self): self.assertEqual(self.ksp.getType(), self.KSP_TYPE) self.ksp.setType(self.KSP_TYPE) self.assertEqual(self.ksp.getType(), self.KSP_TYPE) def testTols(self): tols = self.ksp.getTolerances() self.ksp.setTolerances(*tols) tnames = ('rtol', 'atol', 'divtol', 'max_it') tolvals = [getattr(self.ksp, t) for t in tnames] self.assertEqual(tuple(tols), tuple(tolvals)) def testProperties(self): ksp = self.ksp # ksp.appctx = (1,2,3) self.assertEqual(ksp.appctx, (1,2,3)) ksp.appctx = None self.assertEqual(ksp.appctx, None) # side = ksp.pc_side ksp.pc_side = side self.assertEqual(ksp.pc_side, side) # nt = ksp.norm_type ksp.norm_type = nt self.assertEqual(ksp.norm_type, nt) # ksp.its = 1 self.assertEqual(ksp.its, 1) ksp.its = 0 self.assertEqual(ksp.its, 0) # ksp.norm = 1 self.assertEqual(ksp.norm, 1) ksp.norm = 0 self.assertEqual(ksp.norm, 0) # rh = ksp.history self.assertTrue(len(rh)==0) # reason = PETSc.KSP.ConvergedReason.CONVERGED_ITS ksp.reason = reason self.assertEqual(ksp.reason, reason) self.assertTrue(ksp.converged) self.assertFalse(ksp.diverged) self.assertFalse(ksp.iterating) reason = PETSc.KSP.ConvergedReason.DIVERGED_MAX_IT ksp.reason = reason self.assertEqual(ksp.reason, reason) self.assertFalse(ksp.converged) self.assertTrue(ksp.diverged) self.assertFalse(ksp.iterating) reason = PETSc.KSP.ConvergedReason.CONVERGED_ITERATING ksp.reason = reason self.assertEqual(ksp.reason, reason) self.assertFalse(ksp.converged) self.assertFalse(ksp.diverged) self.assertTrue(ksp.iterating) def testGetSetPC(self): oldpc = self.ksp.getPC() self.assertEqual(oldpc.getRefCount(), 2) newpc = PETSc.PC() newpc.create(self.ksp.getComm()) self.assertEqual(newpc.getRefCount(), 1) self.ksp.setPC(newpc) self.assertEqual(newpc.getRefCount(), 2) self.assertEqual(oldpc.getRefCount(), 1) oldpc.destroy() self.assertFalse(bool(oldpc)) pc = self.ksp.getPC() self.assertTrue(bool(pc)) self.assertEqual(pc, newpc) self.assertEqual(pc.getRefCount(), 3) newpc.destroy() self.assertFalse(bool(newpc)) self.assertEqual(pc.getRefCount(), 2) def testSolve(self): A = PETSc.Mat().create(PETSc.COMM_SELF) A.setSizes([3,3]) A.setType(PETSc.Mat.Type.SEQAIJ) A.setPreallocationNNZ(1) for i in range(3): A.setValue(i, i, 0.9/(i+1)) A.assemble() A.shift(1) x, b = A.createVecs() b.set(10) x.setRandom() self.ksp.setOperators(A) self.ksp.setConvergenceHistory() self.ksp.solve(b, x) r = b.duplicate() u = x.duplicate() self.ksp.buildSolution(u) self.ksp.buildResidual(u) rh = self.ksp.getConvergenceHistory() self.ksp.setConvergenceHistory(0) rh = self.ksp.getConvergenceHistory() self.assertEqual(len(rh), 0) del A, x, b def testResetAndSolve(self): self.ksp.reset() self.testSolve() self.ksp.reset() self.testSolve() self.ksp.reset() def testSetMonitor(self): reshist = {} def monitor(ksp, its, rnorm): reshist[its] = rnorm refcnt = getrefcount(monitor) self.ksp.setMonitor(monitor) self.assertEqual(getrefcount(monitor), refcnt + 1) ## self.testSolve() reshist = {} self.ksp.cancelMonitor() self.assertEqual(getrefcount(monitor), refcnt) self.testSolve() self.assertEqual(len(reshist), 0) ## Monitor = PETSc.KSP.Monitor ## self.ksp.setMonitor(Monitor()) ## self.ksp.setMonitor(Monitor.DEFAULT) ## self.ksp.setMonitor(Monitor.TRUE_RESIDUAL_NORM) ## self.ksp.setMonitor(Monitor.SOLUTION) def testSetConvergenceTest(self): def converged(ksp, its, rnorm): if its > 10: return True return False refcnt = getrefcount(converged) self.ksp.setConvergenceTest(converged) self.assertEqual(getrefcount(converged), refcnt + 1) self.ksp.setConvergenceTest(None) self.assertEqual(getrefcount(converged), refcnt) # -------------------------------------------------------------------- class TestKSPPREONLY(BaseTestKSP, unittest.TestCase): KSP_TYPE = PETSc.KSP.Type.PREONLY PC_TYPE = PETSc.PC.Type.LU class TestKSPRICHARDSON(BaseTestKSP, unittest.TestCase): KSP_TYPE = PETSc.KSP.Type.RICHARDSON class TestKSPCHEBYCHEV(BaseTestKSP, unittest.TestCase): try: KSP_TYPE = PETSc.KSP.Type.CHEBYSHEV except AttributeError: KSP_TYPE = PETSc.KSP.Type.CHEBYCHEV class TestKSPCG(BaseTestKSP, unittest.TestCase): KSP_TYPE = PETSc.KSP.Type.CG class TestKSPCGNE(BaseTestKSP, unittest.TestCase): KSP_TYPE = PETSc.KSP.Type.CGNE class TestKSPSTCG(BaseTestKSP, unittest.TestCase): KSP_TYPE = PETSc.KSP.Type.STCG class TestKSPBCGS(BaseTestKSP, unittest.TestCase): KSP_TYPE = PETSc.KSP.Type.BCGS class TestKSPBCGSL(BaseTestKSP, unittest.TestCase): KSP_TYPE = PETSc.KSP.Type.BCGSL class TestKSPCGS(BaseTestKSP, unittest.TestCase): KSP_TYPE = PETSc.KSP.Type.CGS class TestKSPQCG(BaseTestKSP, unittest.TestCase): KSP_TYPE = PETSc.KSP.Type.QCG PC_TYPE = PETSc.PC.Type.JACOBI class TestKSPBICG(BaseTestKSP, unittest.TestCase): KSP_TYPE = PETSc.KSP.Type.BICG class TestKSPGMRES(BaseTestKSP, unittest.TestCase): KSP_TYPE = PETSc.KSP.Type.GMRES class TestKSPFGMRES(BaseTestKSP, unittest.TestCase): KSP_TYPE = PETSc.KSP.Type.FGMRES # -------------------------------------------------------------------- if PETSc.ScalarType().dtype.char in 'FDG': del TestKSPSTCG # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_nsp.py0000644000175000001440000000465312711377604017271 0ustar dalcinlusers00000000000000import unittest from petsc4py import PETSc import numpy as N from sys import getrefcount # -------------------------------------------------------------------- def allclose(seq1, seq2): for v1, v2 in zip(seq1, seq2): if abs(v1-v2) > 1e-5: return False return True class TestNullSpace(unittest.TestCase): def setUp(self): u1 = PETSc.Vec().createSeq(3) u2 = PETSc.Vec().createSeq(3) u1[0], u1[1], u1[2] = [1, 2, 0]; u1.normalize() u2[0], u2[1], u2[2] = [2, -1, 0]; u2.normalize() basis = [u1, u2] nullsp = PETSc.NullSpace().create(False, basis, comm=PETSc.COMM_SELF) self.basis = basis self.nullsp = nullsp def tearDown(self): self.basis = None self.nullsp = None def _remove(self): v = PETSc.Vec().createSeq(3); v[0], v[1], v[2] = [7, 8, 9] w = v.copy() self.nullsp.remove(w) return (v, w) def testRemove(self): v, w = self._remove() tols = (0, 1e-5) self.assertTrue(allclose(v.array, [7, 8, 9])) self.assertTrue(allclose(w.array, [0, 0, 9])) del v, w def testRemoveInplace(self): v, w = self._remove() self.nullsp.remove(v) self.assertTrue(v.equal(w)) del v, w def testRemoveWithFunction(self): def myremove(nsp, vec): vec.setArray([1,2,3]) self.nullsp.setFunction(myremove) v, w = self._remove() self.assertTrue(allclose(v.array, [7, 8, 9])) self.assertTrue(allclose(w.array, [1, 2, 3])) self.nullsp.remove(v) self.assertTrue(allclose(v.array, [1, 2, 3])) self.nullsp.setFunction(None) self.testRemove() def testGetSetFunction(self): def rem(nsp, vec): vec.set(0) self.nullsp.setFunction(rem) self.assertEqual(getrefcount(rem)-1, 2) dct = self.nullsp.getDict() self.assertTrue(dct is not None) self.assertEqual(getrefcount(dct)-1, 2) fun, a, kw = dct['__function__'] self.assertTrue(fun is rem) self.nullsp.setFunction(None) fun = dct.get('__function__') self.assertEqual(getrefcount(rem)-1, 1) self.assertTrue(fun is None) # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() # -------------------------------------------------------------------- petsc4py-3.7.0/test/test_mat_dense.py0000644000175000001440000001524212711377604020424 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest import numpy as np def mkdata(comm, m, N, bs): start = m * comm.rank end = start + m idt = PETSc.IntType sdt = PETSc.ScalarType rows = np.array(range(start, end), dtype=idt) cols = np.array(range(0, N), dtype=idt) vals = np.array(range(0, m*N*bs*bs), dtype=sdt) vals.shape = (-1, bs, bs) return rows, cols, vals class BaseTestMatAnyDense(object): COMM = PETSc.COMM_NULL GRID = 0, 0 BSIZE = None TYPE = PETSc.Mat.Type.DENSE def setUp(self): COMM = self.COMM GM, GN = self.GRID BS = self.BSIZE #or 1 # self.A = PETSc.Mat().create(comm=COMM) bs = BS or 1; m, N = GM, GN; rowsz = (m*bs, None) colsz = (None, N*bs) self.A.setSizes([rowsz, colsz], BS) self.A.setType(self.TYPE) def tearDown(self): self.A.destroy() self.A = None def testSetValues(self): self._preallocate() r, c, v = self._set_values() self.A.assemble() self._chk_array(self.A, r, c, v) r, c, v = self._set_values() self.A.assemble() self._chk_array(self.A, r, c, v) def testGetDiagonalBlock(self): M, N = self.A.getSize() # only for square matrices if M != N: return self._preallocate() self._set_values() self.A.assemble() B = self.A.getDiagonalBlock() self.assertEqual(self.A.getLocalSize(), B.getSize()) B.destroy() def testCreateTranspose(self): self._preallocate() self._set_values() self.A.assemble() A = self.A AT = PETSc.Mat().createTranspose(A) x, y = A.createVecs() xt, yt = AT.createVecs() # y.setRandom() A.multTranspose(y, x) y.copy(xt) AT.mult(xt, yt) self.assertTrue(yt.equal(x)) # x.setRandom() A.mult(x, y) x.copy(yt) AT.multTranspose(yt, xt) self.assertTrue(xt.equal(y)) def _preallocate(self): self.A.setPreallocationDense(None) def _set_values(self): COMM = self.COMM GM, GN = self.GRID BS = self.BSIZE or 1 rows, cols, vals = mkdata(COMM, GM, GN, BS) if not self.BSIZE: setvalues = self.A.setValues else: setvalues = self.A.setValuesBlocked setvalues(rows, cols, vals) return rows, cols, vals def _chk_bs(self, A, bs): self.assertEqual(A.getBlockSize(), bs or 1) def _chk_array(self, A, r, c, v): return # XXX vals = self.A.getValues(r, c) vals.shape = v.shape self.assertTrue(np.allclose(vals, v)) # -- Dense --------------------- class BaseTestMatDense(BaseTestMatAnyDense, unittest.TestCase): COMM = PETSc.COMM_WORLD GRID = 0, 0 BSIZE = None # -- Seq Dense -- class TestMatSeqDense(BaseTestMatDense): COMM = PETSc.COMM_SELF TYPE = PETSc.Mat.Type.SEQDENSE class TestMatSeqDense_G23(TestMatSeqDense): GRID = 2, 3 class TestMatSeqDense_G45(TestMatSeqDense): GRID = 4, 5 class TestMatSeqDense_G77(TestMatSeqDense): GRID = 7, 7 class TestMatSeqDense_G89(TestMatSeqDense): GRID = 8, 9 # -- MPI Dense -- class TestMatMPIDense(BaseTestMatDense): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.MPIDENSE class TestMatMPIDense_G23(TestMatMPIDense): GRID = 2, 3 class TestMatMPIDense_G45(TestMatMPIDense): GRID = 4, 5 class TestMatMPIDense_G77(TestMatMPIDense): GRID = 7, 7 class TestMatMPIDense_G89(TestMatMPIDense): GRID = 8, 9 # -- Dense + Block --------------- class BaseTestMatDense_B(BaseTestMatAnyDense, unittest.TestCase): COMM = PETSc.COMM_WORLD GRID = 0, 0 BSIZE = 1 def _preallocate(self): #self.A.setBlockSize(self.BSIZE) self.A.setPreallocationDense(None) #self.A.setBlockSize(self.BSIZE) self._chk_bs(self.A, self.BSIZE) # -- Seq Dense + Block -- class TestMatSeqDense_B(BaseTestMatDense_B): COMM = PETSc.COMM_SELF TYPE = PETSc.Mat.Type.SEQDENSE # bs = 1 class TestMatSeqDense_B_G23(TestMatSeqDense_B): GRID = 2, 3 class TestMatSeqDense_B_G45(TestMatSeqDense_B): GRID = 4, 5 class TestMatSeqDense_B_G89(TestMatSeqDense_B): GRID = 8, 9 # bs = 2 class TestMatSeqDense_B_G23_B2(TestMatSeqDense_B_G23): BSIZE = 2 class TestMatSeqDense_B_G45_B2(TestMatSeqDense_B_G45): BSIZE = 2 class TestMatSeqDense_B_G89_B2(TestMatSeqDense_B_G89): BSIZE = 2 # bs = 3 class TestMatSeqDense_B_G23_B3(TestMatSeqDense_B_G23): BSIZE = 3 class TestMatSeqDense_B_G45_B3(TestMatSeqDense_B_G45): BSIZE = 3 class TestMatSeqDense_B_G89_B3(TestMatSeqDense_B_G89): BSIZE = 3 # bs = 4 class TestMatSeqDense_B_G23_B4(TestMatSeqDense_B_G23): BSIZE = 4 class TestMatSeqDense_B_G45_B4(TestMatSeqDense_B_G45): BSIZE = 4 class TestMatSeqDense_B_G89_B4(TestMatSeqDense_B_G89): BSIZE = 4 # bs = 5 class TestMatSeqDense_B_G23_B5(TestMatSeqDense_B_G23): BSIZE = 5 class TestMatSeqDense_B_G45_B5(TestMatSeqDense_B_G45): BSIZE = 5 class TestMatSeqDense_B_G89_B5(TestMatSeqDense_B_G89): BSIZE = 5 # -- MPI Dense + Block -- class TestMatMPIDense_B(BaseTestMatDense_B): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.MPIDENSE # bs = 1 class TestMatMPIDense_B_G23(TestMatMPIDense_B): GRID = 2, 3 class TestMatMPIDense_B_G45(TestMatMPIDense_B): GRID = 4, 5 class TestMatMPIDense_B_G77(TestMatMPIDense_B): GRID = 7, 7 class TestMatMPIDense_B_G89(TestMatMPIDense_B): GRID = 8, 9 # bs = 2 class TestMatMPIDense_B_G23_B2(TestMatMPIDense_B_G23): BSIZE = 2 class TestMatMPIDense_B_G45_B2(TestMatMPIDense_B_G45): BSIZE = 2 class TestMatMPIDense_B_G77_B2(TestMatMPIDense_B_G77): BSIZE = 2 class TestMatMPIDense_B_G89_B2(TestMatMPIDense_B_G89): BSIZE = 2 # bs = 3 class TestMatMPIDense_B_G23_B3(TestMatMPIDense_B_G23): BSIZE = 3 class TestMatMPIDense_B_G45_B3(TestMatMPIDense_B_G45): BSIZE = 3 class TestMatMPIDense_B_G77_B3(TestMatMPIDense_B_G77): BSIZE = 3 class TestMatMPIDense_B_G89_B3(TestMatMPIDense_B_G89): BSIZE = 3 # bs = 4 class TestMatMPIDense_B_G23_B4(TestMatMPIDense_B_G23): BSIZE = 4 class TestMatMPIDense_B_G45_B4(TestMatMPIDense_B_G45): BSIZE = 4 class TestMatMPIDense_B_G77_B4(TestMatMPIDense_B_G77): BSIZE = 4 class TestMatMPIDense_B_G89_B4(TestMatMPIDense_B_G89): BSIZE = 4 # bs = 5 class TestMatMPIDense_B_G23_B5(TestMatMPIDense_B_G23): BSIZE = 5 class TestMatMPIDense_B_G45_B5(TestMatMPIDense_B_G45): BSIZE = 5 class TestMatMPIDense_B_G77_B5(TestMatMPIDense_B_G77): BSIZE = 5 class TestMatMPIDense_B_G89_B5(TestMatMPIDense_B_G89): BSIZE = 5 # ----- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_dmplex.py0000644000175000001440000001436212711377604017760 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest import numpy as np # -------------------------------------------------------------------- class BaseTestPlex(object): COMM = PETSc.COMM_WORLD DIM = 1 CELLS = [[0, 1], [1, 2]] COORDS = [[0.], [0.5], [1.]] COMP = 1 DOFS = [1, 0] def setUp(self): self.plex = PETSc.DMPlex().createFromCellList(self.DIM, self.CELLS, self.COORDS, comm=self.COMM) def tearDown(self): self.plex.destroy() self.plex = None def testTopology(self): dim = self.plex.getDimension() pStart, pEnd = self.plex.getChart() cStart, cEnd = self.plex.getHeightStratum(0) vStart, vEnd = self.plex.getDepthStratum(0) numDepths = self.plex.getLabelSize("depth") coords_raw = self.plex.getCoordinates().getArray() coords = np.reshape(coords_raw, (vEnd - vStart, dim)) self.assertEqual(dim, self.DIM) self.assertEqual(cEnd-cStart, len(self.CELLS)) self.assertEqual(vEnd-vStart, len(self.COORDS)) self.assertEqual(numDepths, self.DIM+1) self.assertTrue((coords == self.COORDS).all()) def testClosure(self): pStart, pEnd = self.plex.getChart() for p in range(pStart, pEnd): closure = self.plex.getTransitiveClosure(p)[0] for c in closure: cone = self.plex.getCone(c) self.assertEqual(self.plex.getConeSize(c), len(cone)) for i in cone: self.assertIn(i, closure) star = self.plex.getTransitiveClosure(p, useCone=False)[0] for s in star: support = self.plex.getSupport(s) self.assertEqual(self.plex.getSupportSize(s), len(support)) for i in support: self.assertIn(i, star) def testSectionDofs(self): section = self.plex.createSection([self.COMP], [self.DOFS]) size = section.getStorageSize() entity_dofs = [self.plex.getStratumSize("depth", d) * self.DOFS[d] for d in range(self.DIM+1)] self.assertEqual(sum(entity_dofs), size) def testSectionClosure(self): section = self.plex.createSection([self.COMP], [self.DOFS]) self.plex.setDefaultSection(section) vec = self.plex.createLocalVec() pStart, pEnd = self.plex.getChart() for p in range(pStart, pEnd): for i in range(section.getDof(p)): off = section.getOffset(p) vec.setValue(off+i, p) for p in range(pStart, pEnd): point_closure = self.plex.getTransitiveClosure(p)[0] dof_closure = self.plex.vecGetClosure(section, vec, p) for p in dof_closure: self.assertIn(p, point_closure) def testBoundaryLabel(self): self.assertFalse(self.plex.hasLabel("boundary")) self.plex.markBoundaryFaces("boundary") self.assertTrue(self.plex.hasLabel("boundary")) faces = self.plex.getStratumIS("boundary", 1) for f in faces.getIndices(): points, orient = self.plex.getTransitiveClosure(f, useCone=True) for p in points: self.plex.setLabelValue("boundary", p, 1) pStart, pEnd = self.plex.getChart() for p in range(pStart, pEnd): if self.plex.getLabelValue("boundary", p) != 1: self.plex.setLabelValue("boundary", p, 2) numBoundary = self.plex.getStratumSize("boundary", 1) numInterior = self.plex.getStratumSize("boundary", 2) self.assertNotEqual(numBoundary, pEnd - pStart) self.assertNotEqual(numInterior, pEnd - pStart) self.assertEqual(numBoundary + numInterior, pEnd - pStart) # -------------------------------------------------------------------- class BaseTestPlex_2D(BaseTestPlex): DIM = 2 CELLS = [[0, 1, 3], [1, 3, 4], [1, 2, 4], [2, 4, 5], [3, 4, 6], [4, 6, 7], [4, 5, 7], [5, 7, 8]] COORDS = [[0.0, 0.0], [0.5, 0.0], [1.0, 0.0], [0.0, 0.5], [0.5, 0.5], [1.0, 0.5], [0.0, 1.0], [0.5, 1.0], [1.0, 1.0]] DOFS = [1, 0, 0] class BaseTestPlex_3D(BaseTestPlex): DIM = 3 CELLS = [[0, 2, 3, 7], [0, 2, 6, 7], [0, 4, 6, 7], [0, 1, 3, 7], [0, 1, 5, 7], [0, 4, 5, 7]] COORDS = [[0., 0., 0.], [1., 0., 0.], [0., 1., 0.], [1., 1., 0.], [0., 0., 1.], [1., 0., 1.], [0., 1., 1.], [1., 1., 1.]] DOFS = [1, 0, 0, 0] # -------------------------------------------------------------------- class TestPlex_1D(BaseTestPlex, unittest.TestCase): pass class TestPlex_2D(BaseTestPlex_2D, unittest.TestCase): pass class TestPlex_3D(BaseTestPlex_3D, unittest.TestCase): pass class TestPlex_2D_P3(BaseTestPlex_2D, unittest.TestCase): DOFS = [1, 2, 1] class TestPlex_3D_P3(BaseTestPlex_3D, unittest.TestCase): DOFS = [1, 2, 1, 0] class TestPlex_3D_P4(BaseTestPlex_3D, unittest.TestCase): DOFS = [1, 3, 3, 1] import sys try: raise PETSc.Error PETSc.DMPlex().createBoxMesh(1, comm=PETSc.COMM_SELF).destroy() except PETSc.Error: pass else: class TestPlex_2D_Box(BaseTestPlex_2D, unittest.TestCase): def setUp(self): self.plex = PETSc.DMPlex().createBoxMesh(self.DIM) class TestPlex_2D_Boundary(BaseTestPlex_2D, unittest.TestCase): def setUp(self): boundary = PETSc.DMPlex().create(self.COMM) boundary.createSquareBoundary([0., 0.], [1., 1.], [2, 2]) boundary.setDimension(self.DIM-1) self.plex = PETSc.DMPlex().generate(boundary) class TestPlex_3D_Box(BaseTestPlex_3D, unittest.TestCase): def setUp(self): self.plex = PETSc.DMPlex().createBoxMesh(self.DIM) class TestPlex_3D_Boundary(BaseTestPlex_3D, unittest.TestCase): def setUp(self): boundary = PETSc.DMPlex().create(self.COMM) boundary.createCubeBoundary([0., 0., 0.], [1., 1., 1.], [1, 1, 1]) boundary.setDimension(self.DIM-1) self.plex = PETSc.DMPlex().generate(boundary) # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_mat_aij.py0000644000175000001440000006521112711377604020072 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest import numpy as N def mkgraph(comm, m, n): start = m*n * comm.rank end = start + m*n idt = PETSc.IntType rows = [] for I in range(start, end) : rows.append([]) adj = rows[-1] i = I//n; j = I - i*n if i> 0 : J = I-n; adj.append(J) if j> 0 : J = I-1; adj.append(J) adj.append(I) if j< n-1: J = I+1; adj.append(J) if i< m-1: J = I+n; adj.append(J) nods = N.array(range(start, end), dtype=idt) xadj = N.array([0]*(len(rows)+1), dtype=idt) xadj[0] = 0 xadj[1:] = N.cumsum([len(r) for r in rows], dtype=idt) if not rows: adjy = N.array([],dtype=idt) else: adjy = N.concatenate(rows).astype(idt) return nods, xadj, adjy class BaseTestMatAnyAIJ(object): COMM = PETSc.COMM_NULL TYPE = None GRID = 0, 0 BSIZE = None def setUp(self): COMM = self.COMM GM, GN = self.GRID BS = self.BSIZE # try: rbs, cbs = BS rbs = rbs or 1 cbs = cbs or 1 except (TypeError, ValueError): rbs = cbs = BS or 1 sdt = dtype = PETSc.ScalarType self.rows, self.xadj, self.adjy = mkgraph(COMM, GM, GN) self.vals = N.array(range(1, 1 + len(self.adjy)* rbs*cbs), dtype=sdt) self.vals.shape = (-1, rbs, cbs) # m, n = GM, GN rowsz = (m*n*rbs, None) colsz = (m*n*cbs, None) A = self.A = PETSc.Mat().create(comm=COMM) A.setType(self.TYPE) A.setSizes([rowsz, colsz], BS) def tearDown(self): self.A.destroy() self.A = None def testSetPreallocNNZ(self): nnz = [5, 2] self.A.setPreallocationNNZ(nnz) self._chk_bs(self.A, self.BSIZE) opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values() self.A.assemble() self._chk_aij(self.A, ai, aj) opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values_ijv() self.A.assemble() self._chk_aij(self.A, ai, aj) def testSetPreallocNNZ_2(self): _, ai, _, _ =self._get_aijv() d_nnz = N.diff(ai) nnz = [d_nnz, 3] self.A.setPreallocationNNZ(nnz) self._chk_bs(self.A, self.BSIZE) opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values() self.A.assemble() self._chk_aij(self.A, ai, aj) opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR self.A.setOption(opt, True) ai, aj, av =self._set_values_ijv() self.A.assemble() self._chk_aij(self.A, ai, aj) def testSetPreallocCSR(self): _, ai, aj, _ = self._get_aijv() csr = [ai, aj] self.A.setPreallocationCSR(csr) self._chk_bs(self.A, self.BSIZE) self._chk_aij(self.A, ai, aj) opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR self.A.setOption(opt, True) self._set_values() self.A.assemble() self._chk_aij(self.A, ai, aj) self._set_values_ijv() self.A.assemble() self._chk_aij(self.A, ai, aj) def testSetPreallocCSR_2(self): _, ai, aj, av =self._get_aijv() csr = [ai, aj, av] self.A.setPreallocationCSR(csr) self._chk_bs(self.A, self.BSIZE) self._chk_aij(self.A, ai, aj) opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR self.A.setOption(opt, True) self._set_values() self.A.assemble() self._chk_aij(self.A, ai, aj) self._set_values_ijv() self.A.assemble() self._chk_aij(self.A, ai, aj) def testSetValues(self): self._preallocate() opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values() self.A.assemble() self._chk_aij(self.A, ai, aj) opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values() self.A.assemble() self._chk_aij(self.A, ai, aj) def testSetValuesIJV(self): self._preallocate() opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values_ijv() self.A.assemble() self._chk_aij(self.A, ai, aj) opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values_ijv() self.A.assemble() self._chk_aij(self.A, ai, aj) def testGetValuesCSR(self): self._preallocate() self._set_values_ijv() A = self.A A.assemble() if 'sbaij' in A.getType(): opt = PETSc.Mat.Option.GETROW_UPPERTRIANGULAR self.A.setOption(opt, True) ai, aj, av = A.getValuesCSR() rstart, rend = A.getOwnershipRange() for row in range(rstart, rend): cols, vals = A.getRow(row) i = row - rstart self.assertTrue(N.allclose(aj[ai[i]:ai[i+1]], cols)) self.assertTrue(N.allclose(av[ai[i]:ai[i+1]], vals)) #def testConvertToAIJ(self): # self._preallocate() # self._set_values_ijv() # A = self.A # A.assemble() # A.convert('aij') def testGetDiagonalBlock(self): self._preallocate() self._set_values_ijv() self.A.assemble() B = self.A.getDiagonalBlock() self.assertEqual(self.A.getLocalSize(), B.getSize()) B.destroy() def testInvertBlockDiagonal(self): try: _ = len(self.BSIZE) return except (TypeError, ValueError): pass self._preallocate() rbs, cbs = self.A.getBlockSizes() if rbs != cbs: return self._set_values_ijv() self.A.assemble() self.A.shift(1000) # Make nonsingular ibdiag = self.A.invertBlockDiagonal() bs = self.A.getBlockSize() m, _ = self.A.getLocalSize() self.assertEqual(ibdiag.shape, (m//bs, bs, bs)) tmp = N.empty((m//bs, bs, bs), dtype=PETSc.ScalarType) rstart, rend = self.A.getOwnershipRange() s, e = rstart//bs, rend//bs for i in range(s, e): rows = cols = N.arange(i*bs,(i+1)*bs, dtype=PETSc.IntType) vals = self.A.getValues(rows,cols) tmp[i-s,:,:] = N.linalg.inv(vals) self.assertTrue(N.allclose(ibdiag, tmp)) def testGetSubMatrix(self): if 'baij' in self.A.getType(): return # XXX self._preallocate() self._set_values_ijv() self.A.assemble() # rank = self.A.getComm().getRank() rs, re = self.A.getOwnershipRange() cs, ce = self.A.getOwnershipRangeColumn() rows = N.array(range(rs, re), dtype=PETSc.IntType) cols = N.array(range(cs, ce), dtype=PETSc.IntType) rows = PETSc.IS().createGeneral(rows, comm=self.A.getComm()) cols = PETSc.IS().createGeneral(cols, comm=self.A.getComm()) # S = self.A.getSubMatrix(rows, None) S.zeroEntries() self.A.getSubMatrix(rows, None, S) S.destroy() # S = self.A.getSubMatrix(rows, cols) S.zeroEntries() self.A.getSubMatrix(rows, cols, S) S.destroy() def testGetSubMatrices(self): if 'baij' in self.A.getType(): return # XXX self._preallocate() self._set_values_ijv() self.A.assemble() # rs, re = self.A.getOwnershipRange() cs, ce = self.A.getOwnershipRangeColumn() rows = N.array(range(rs, re), dtype=PETSc.IntType) cols = N.array(range(cs, ce), dtype=PETSc.IntType) rows = PETSc.IS().createGeneral(rows, comm=self.A.getComm()) cols = PETSc.IS().createGeneral(cols, comm=self.A.getComm()) # (S,) = self.A.getSubMatrices(rows, cols) S.zeroEntries() self.A.getSubMatrices(rows, cols, submats=[S]) S.destroy() # (S1,) = self.A.getSubMatrices([rows], [cols]) (S2,) = self.A.getSubMatrices([rows], [cols]) self.assertTrue(S1.equal(S2)) S2.zeroEntries() self.A.getSubMatrices([rows], [cols], [S2]) self.assertTrue(S1.equal(S2)) S1.destroy() S2.destroy() # if 'seq' not in self.A.getType(): return # XXX S1, S2 = self.A.getSubMatrices([rows, rows], [cols, cols]) self.assertTrue(S1.equal(S2)) S1.zeroEntries() S2.zeroEntries() self.A.getSubMatrices([rows, rows], [cols, cols], [S1, S2]) self.assertTrue(S1.equal(S2)) S1.destroy() S2.destroy() def testGetRedundantMatrix(self): if 'aijcrl' in self.A.getType(): return # duplicate not supported self._preallocate() self._set_values_ijv() self.A.assemble() #Test the most simple case sizecommA = self.A.getComm().getSize() Ared = self.A.getRedundantMatrix(sizecommA) sizecommAred = Ared.getComm().getSize() self.assertEqual(1, sizecommAred) Ared.destroy() def testCreateTranspose(self): self._preallocate() self._set_values_ijv() self.A.assemble() A = self.A AT = PETSc.Mat().createTranspose(A) x, y = A.createVecs() xt, yt = AT.createVecs() # y.setRandom() A.multTranspose(y, x) y.copy(xt) AT.mult(xt, yt) self.assertTrue(yt.equal(x)) # x.setRandom() A.mult(x, y) x.copy(yt) AT.multTranspose(yt, xt) self.assertTrue(xt.equal(y)) def _get_aijv(self): return (self.rows, self.xadj, self.adjy, self.vals,) def _preallocate(self): self.A.setPreallocationNNZ([5, 2]) def _set_values(self): import sys if hasattr(sys, 'gettotalrefcount'): return self._set_values_ijv() # XXX Why the code below leak refs as a beast ??? row, ai, aj, av =self._get_aijv() if not self.BSIZE: setvalues = self.A.setValues else: setvalues = self.A.setValuesBlocked for i, r in enumerate(row): s, e = ai[i], ai[i+1] setvalues(r, aj[s:e], av[s:e]) return ai, aj, av def _set_values_ijv(self): row, ai, aj, av =self._get_aijv() if not self.BSIZE: setvalues = self.A.setValuesIJV else: setvalues = self.A.setValuesBlockedIJV setvalues(ai, aj, av, rowmap=row) setvalues(ai, aj, av, rowmap=None) return ai, aj, av def _chk_bs(self, A, bs): self.assertEqual(A.getBlockSize(), bs or 1) def _chk_bsizes(self, A, bsizes): try: rbs, cbs = bsizes except (TypeError, ValueError): rbs = cbs = bsizes self.assertEqual(A.getBlockSizes(), (rbs, cbs)) def _chk_aij(self, A, i, j): compressed = bool(self.BSIZE) ai, aj = A.getRowIJ(compressed=compressed) if ai is not None and aj is not None: self.assertTrue(N.all(i==ai)) self.assertTrue(N.all(j==aj)) ai, aj = A.getColumnIJ(compressed=compressed) if ai is not None and aj is not None: self.assertTrue(N.all(i==ai)) self.assertTrue(N.all(j==aj)) # -- AIJ --------------------- class BaseTestMatAIJ(BaseTestMatAnyAIJ, unittest.TestCase): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.AIJ GRID = 0, 0 BSIZE = None # -- Seq AIJ -- class TestMatSeqAIJ(BaseTestMatAIJ): COMM = PETSc.COMM_SELF TYPE = PETSc.Mat.Type.SEQAIJ class TestMatSeqAIJ_G23(TestMatSeqAIJ): GRID = 2, 3 class TestMatSeqAIJ_G45(TestMatSeqAIJ): GRID = 4, 5 class TestMatSeqAIJ_G89(TestMatSeqAIJ): GRID = 8, 9 # -- MPI AIJ -- class TestMatMPIAIJ(BaseTestMatAIJ): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.MPIAIJ class TestMatMPIAIJ_G23(TestMatMPIAIJ): GRID = 2, 3 class TestMatMPIAIJ_G45(TestMatMPIAIJ): GRID = 4, 5 class TestMatMPIAIJ_G89(TestMatMPIAIJ): GRID = 8, 9 # -- Block AIJ --------------- class BaseTestMatBAIJ(BaseTestMatAnyAIJ, unittest.TestCase): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.BAIJ GRID = 0, 0 BSIZE = 1 # -- Seq Block AIJ -- class TestMatSeqBAIJ(BaseTestMatBAIJ): COMM = PETSc.COMM_SELF TYPE = PETSc.Mat.Type.SEQBAIJ # bs = 1 class TestMatSeqBAIJ_G23(TestMatSeqBAIJ): GRID = 2, 3 class TestMatSeqBAIJ_G45(TestMatSeqBAIJ): GRID = 4, 5 class TestMatSeqBAIJ_G89(TestMatSeqBAIJ): GRID = 8, 9 # bs = 2 class TestMatSeqBAIJ_G23_B2(TestMatSeqBAIJ_G23): BSIZE = 2 class TestMatSeqBAIJ_G45_B2(TestMatSeqBAIJ_G45): BSIZE = 2 class TestMatSeqBAIJ_G89_B2(TestMatSeqBAIJ_G89): BSIZE = 2 # bs = 3 class TestMatSeqBAIJ_G23_B3(TestMatSeqBAIJ_G23): BSIZE = 3 class TestMatSeqBAIJ_G45_B3(TestMatSeqBAIJ_G45): BSIZE = 3 class TestMatSeqBAIJ_G89_B3(TestMatSeqBAIJ_G89): BSIZE = 3 # bs = 4 class TestMatSeqBAIJ_G23_B4(TestMatSeqBAIJ_G23): BSIZE = 4 class TestMatSeqBAIJ_G45_B4(TestMatSeqBAIJ_G45): BSIZE = 4 class TestMatSeqBAIJ_G89_B4(TestMatSeqBAIJ_G89): BSIZE = 4 # bs = 5 class TestMatSeqBAIJ_G23_B5(TestMatSeqBAIJ_G23): BSIZE = 5 class TestMatSeqBAIJ_G45_B5(TestMatSeqBAIJ_G45): BSIZE = 5 class TestMatSeqBAIJ_G89_B5(TestMatSeqBAIJ_G89): BSIZE = 5 # -- MPI Block AIJ -- class TestMatMPIBAIJ(BaseTestMatBAIJ): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.MPIBAIJ # bs = 1 class TestMatMPIBAIJ_G23(TestMatMPIBAIJ): GRID = 2, 3 class TestMatMPIBAIJ_G45(TestMatMPIBAIJ): GRID = 4, 5 class TestMatMPIBAIJ_G89(TestMatMPIBAIJ): GRID = 8, 9 # bs = 2 class TestMatMPIBAIJ_G23_B2(TestMatMPIBAIJ_G23): BSIZE = 2 class TestMatMPIBAIJ_G45_B2(TestMatMPIBAIJ_G45): BSIZE = 2 class TestMatMPIBAIJ_G89_B2(TestMatMPIBAIJ_G89): BSIZE = 2 # bs = 3 class TestMatMPIBAIJ_G23_B3(TestMatMPIBAIJ_G23): BSIZE = 3 class TestMatMPIBAIJ_G45_B3(TestMatMPIBAIJ_G45): BSIZE = 3 class TestMatMPIBAIJ_G89_B3(TestMatMPIBAIJ_G89): BSIZE = 3 # bs = 4 class TestMatMPIBAIJ_G23_B4(TestMatMPIBAIJ_G23): BSIZE = 4 class TestMatMPIBAIJ_G45_B4(TestMatMPIBAIJ_G45): BSIZE = 4 class TestMatMPIBAIJ_G89_B4(TestMatMPIBAIJ_G89): BSIZE = 4 # bs = 5 class TestMatMPIBAIJ_G23_B5(TestMatMPIBAIJ_G23): BSIZE = 5 class TestMatMPIBAIJ_G45_B5(TestMatMPIBAIJ_G45): BSIZE = 5 class TestMatMPIBAIJ_G89_B5(TestMatMPIBAIJ_G89): BSIZE = 5 # -- SymmBlock AIJ --------------- class BaseTestMatSBAIJ(BaseTestMatAnyAIJ, unittest.TestCase): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.SBAIJ GRID = 0, 0 BSIZE = 1 def testInvertBlockDiagonal(self): pass def _chk_aij(self, A, i, j): ai, aj = A.getRowIJ(compressed=True) if ai is not None and aj is not None: if 0: # XXX Implement self.assertTrue(N.all(i==ai)) self.assertTrue(N.all(j==aj)) ai, aj = A.getColumnIJ(compressed=True) if ai is not None and aj is not None: if 0: # XXX Implement self.assertTrue(N.all(i==ai)) self.assertTrue(N.all(j==aj)) # -- Seq SymmBlock AIJ -- class TestMatSeqSBAIJ(BaseTestMatSBAIJ): COMM = PETSc.COMM_SELF TYPE = PETSc.Mat.Type.SEQSBAIJ # bs = 1 class TestMatSeqSBAIJ_G23(TestMatSeqSBAIJ): GRID = 2, 3 class TestMatSeqSBAIJ_G45(TestMatSeqSBAIJ): GRID = 4, 5 class TestMatSeqSBAIJ_G89(TestMatSeqSBAIJ): GRID = 8, 9 # bs = 2 class TestMatSeqSBAIJ_G23_B2(TestMatSeqSBAIJ_G23): BSIZE = 2 class TestMatSeqSBAIJ_G45_B2(TestMatSeqSBAIJ_G45): BSIZE = 2 class TestMatSeqSBAIJ_G89_B2(TestMatSeqSBAIJ_G89): BSIZE = 2 # bs = 3 class TestMatSeqSBAIJ_G23_B3(TestMatSeqSBAIJ_G23): BSIZE = 3 class TestMatSeqSBAIJ_G45_B3(TestMatSeqSBAIJ_G45): BSIZE = 3 class TestMatSeqSBAIJ_G89_B3(TestMatSeqSBAIJ_G89): BSIZE = 3 # bs = 4 class TestMatSeqSBAIJ_G23_B4(TestMatSeqSBAIJ_G23): BSIZE = 4 class TestMatSeqSBAIJ_G45_B4(TestMatSeqSBAIJ_G45): BSIZE = 4 class TestMatSeqSBAIJ_G89_B4(TestMatSeqSBAIJ_G89): BSIZE = 4 # bs = 5 class TestMatSeqSBAIJ_G23_B5(TestMatSeqSBAIJ_G23): BSIZE = 5 class TestMatSeqSBAIJ_G45_B5(TestMatSeqSBAIJ_G45): BSIZE = 5 class TestMatSeqSBAIJ_G89_B5(TestMatSeqSBAIJ_G89): BSIZE = 5 # -- MPI SymmBlock AIJ -- class TestMatMPISBAIJ(BaseTestMatSBAIJ): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.MPISBAIJ # bs = 1 class TestMatMPISBAIJ_G23(TestMatMPISBAIJ): GRID = 2, 3 class TestMatMPISBAIJ_G45(TestMatMPISBAIJ): GRID = 4, 5 class TestMatMPISBAIJ_G89(TestMatMPISBAIJ): GRID = 8, 9 # bs = 2 class TestMatMPISBAIJ_G23_B2(TestMatMPISBAIJ_G23): BSIZE = 2 class TestMatMPISBAIJ_G45_B2(TestMatMPISBAIJ_G45): BSIZE = 2 class TestMatMPISBAIJ_G89_B2(TestMatMPISBAIJ_G89): BSIZE = 2 # bs = 3 class TestMatMPISBAIJ_G23_B3(TestMatMPISBAIJ_G23): BSIZE = 3 class TestMatMPISBAIJ_G45_B3(TestMatMPISBAIJ_G45): BSIZE = 3 class TestMatMPISBAIJ_G89_B3(TestMatMPISBAIJ_G89): BSIZE = 3 # bs = 4 class TestMatMPISBAIJ_G23_B4(TestMatMPISBAIJ_G23): BSIZE = 4 class TestMatMPISBAIJ_G45_B4(TestMatMPISBAIJ_G45): BSIZE = 4 class TestMatMPISBAIJ_G89_B4(TestMatMPISBAIJ_G89): BSIZE = 4 # bs = 5 class TestMatMPISBAIJ_G23_B5(TestMatMPISBAIJ_G23): BSIZE = 5 class TestMatMPISBAIJ_G45_B5(TestMatMPISBAIJ_G45): BSIZE = 5 class TestMatMPISBAIJ_G89_B5(TestMatMPISBAIJ_G89): BSIZE = 5 # -- AIJ + Block --------------- class BaseTestMatAIJ_B(BaseTestMatAnyAIJ, unittest.TestCase): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.AIJ GRID = 0, 0 BSIZE = 1 def testSetPreallocNNZ(self):pass def testSetPreallocNNZ_2(self):pass def testSetPreallocCSR(self):pass def testSetPreallocCSR_2(self):pass def testSetValues(self): self._preallocate() opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values() self.A.assemble() self._chk_aij(self.A, ai, aj) opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values() self.A.assemble() self._chk_aij(self.A, ai, aj) def testSetValuesIJV(self): self._preallocate() opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values_ijv() self.A.assemble() self._chk_aij(self.A, ai, aj) opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values_ijv() self.A.assemble() self._chk_aij(self.A, ai, aj) def _preallocate(self): self.A.setPreallocationNNZ([5*self.BSIZE, 3*self.BSIZE]) self._chk_bs(self.A, self.BSIZE) def _chk_aij(self, A, i, j): bs = self.BSIZE or 1 ai, aj = A.getRowIJ() if ai is not None and aj is not None: ## XXX map and check !! #self.assertTrue(N.all(i==ai)) #self.assertTrue(N.all(j==aj)) pass ai, aj = A.getColumnIJ(compressed=bool(self.BSIZE)) if ai is not None and aj is not None: ## XXX map and check !! #self.assertTrue(N.all(i==ai)) #self.assertTrue(N.all(j==aj)) pass # -- Seq AIJ + Block -- class TestMatSeqAIJ_B(BaseTestMatAIJ_B): COMM = PETSc.COMM_SELF TYPE = PETSc.Mat.Type.SEQAIJ # bs = 1 class TestMatSeqAIJ_B_G23(TestMatSeqAIJ_B): GRID = 2, 3 class TestMatSeqAIJ_B_G45(TestMatSeqAIJ_B): GRID = 4, 5 class TestMatSeqAIJ_B_G89(TestMatSeqAIJ_B): GRID = 8, 9 # bs = 2 class TestMatSeqAIJ_B_G23_B2(TestMatSeqAIJ_B_G23): BSIZE = 2 class TestMatSeqAIJ_B_G45_B2(TestMatSeqAIJ_B_G45): BSIZE = 2 class TestMatSeqAIJ_B_G89_B2(TestMatSeqAIJ_B_G89): BSIZE = 2 # bs = 3 class TestMatSeqAIJ_B_G23_B3(TestMatSeqAIJ_B_G23): BSIZE = 3 class TestMatSeqAIJ_B_G45_B3(TestMatSeqAIJ_B_G45): BSIZE = 3 class TestMatSeqAIJ_B_G89_B3(TestMatSeqAIJ_B_G89): BSIZE = 3 # bs = 4 class TestMatSeqAIJ_B_G23_B4(TestMatSeqAIJ_B_G23): BSIZE = 4 class TestMatSeqAIJ_B_G45_B4(TestMatSeqAIJ_B_G45): BSIZE = 4 class TestMatSeqAIJ_B_G89_B4(TestMatSeqAIJ_B_G89): BSIZE = 4 # bs = 5 class TestMatSeqAIJ_B_G23_B5(TestMatSeqAIJ_B_G23): BSIZE = 5 class TestMatSeqAIJ_B_G45_B5(TestMatSeqAIJ_B_G45): BSIZE = 5 class TestMatSeqAIJ_B_G89_B5(TestMatSeqAIJ_B_G89): BSIZE = 5 # -- MPI AIJ + Block -- class TestMatMPIAIJ_B(BaseTestMatAIJ_B): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.MPIAIJ # bs = 1 class TestMatMPIAIJ_B_G23(TestMatMPIAIJ_B): GRID = 2, 3 class TestMatMPIAIJ_B_G45(TestMatMPIAIJ_B): GRID = 4, 5 class TestMatMPIAIJ_B_G89(TestMatMPIAIJ_B): GRID = 8, 9 # bs = 2 class TestMatMPIAIJ_B_G23_B2(TestMatMPIAIJ_B_G23): BSIZE = 2 class TestMatMPIAIJ_B_G45_B2(TestMatMPIAIJ_B_G45): BSIZE = 2 class TestMatMPIAIJ_B_G89_B2(TestMatMPIAIJ_B_G89): BSIZE = 2 # bs = 3 class TestMatMPIAIJ_B_G23_B3(TestMatMPIAIJ_B_G23): BSIZE = 3 class TestMatMPIAIJ_B_G45_B3(TestMatMPIAIJ_B_G45): BSIZE = 3 class TestMatMPIAIJ_B_G89_B3(TestMatMPIAIJ_B_G89): BSIZE = 3 # bs = 4 class TestMatMPIAIJ_B_G23_B4(TestMatMPIAIJ_B_G23): BSIZE = 4 class TestMatMPIAIJ_B_G45_B4(TestMatMPIAIJ_B_G45): BSIZE = 4 class TestMatMPIAIJ_B_G89_B4(TestMatMPIAIJ_B_G89): BSIZE = 4 # bs = 5 class TestMatMPIAIJ_B_G23_B5(TestMatMPIAIJ_B_G23): BSIZE = 5 class TestMatMPIAIJ_B_G45_B5(TestMatMPIAIJ_B_G45): BSIZE = 5 class TestMatMPIAIJ_B_G89_B5(TestMatMPIAIJ_B_G89): BSIZE = 5 # -- Non-square blocks -- class BaseTestMatAIJ_B(BaseTestMatAnyAIJ, unittest.TestCase): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.AIJ GRID = 0, 0 BSIZE = 4, 2 def _preallocate(self): try: rbs, cbs = self.BSIZE except (TypeError, ValueError): rbs = cbs = self.BSIZE self.A.setPreallocationNNZ([5*rbs, 3*cbs]) self._chk_bsizes(self.A, self.BSIZE) def testSetPreallocNNZ(self):pass def testSetPreallocNNZ_2(self):pass def testSetPreallocCSR(self):pass def testSetPreallocCSR_2(self):pass def testSetValues(self): self._preallocate() opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values() self.A.assemble() self._chk_aij(self.A, ai, aj) opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values() self.A.assemble() self._chk_aij(self.A, ai, aj) def testSetValuesIJV(self): self._preallocate() opt = PETSc.Mat.Option.NEW_NONZERO_ALLOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values_ijv() self.A.assemble() self._chk_aij(self.A, ai, aj) opt = PETSc.Mat.Option.NEW_NONZERO_LOCATION_ERR self.A.setOption(opt, True) ai, aj, av = self._set_values_ijv() self.A.assemble() self._chk_aij(self.A, ai, aj) def _chk_aij(self, A, i, j): bs = self.BSIZE or 1 ai, aj = A.getRowIJ() if ai is not None and aj is not None: ## XXX map and check !! #self.assertTrue(N.all(i==ai)) #self.assertTrue(N.all(j==aj)) pass ai, aj = A.getColumnIJ() if ai is not None and aj is not None: ## XXX map and check !! #self.assertTrue(N.all(i==ai)) #self.assertTrue(N.all(j==aj)) pass # -- AIJCRL --------------------- class BaseTestMatAIJCRL(BaseTestMatAIJ, unittest.TestCase): TYPE = PETSc.Mat.Type.AIJCRL # -- Seq AIJCRL -- class TestMatSeqAIJCRL(BaseTestMatAIJCRL): COMM = PETSc.COMM_SELF TYPE = PETSc.Mat.Type.SEQAIJCRL class TestMatSeqAIJCRL_G23(TestMatSeqAIJCRL): GRID = 2, 3 class TestMatSeqAIJCRL_G45(TestMatSeqAIJCRL): GRID = 4, 5 class TestMatSeqAIJCRL_G89(TestMatSeqAIJCRL): GRID = 8, 9 # -- MPI AIJCRL -- class TestMatMPIAIJCRL(BaseTestMatAIJCRL): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.MPIAIJCRL class TestMatMPIAIJCRL_G23(TestMatMPIAIJCRL): GRID = 2, 3 class TestMatMPIAIJCRL_G45(TestMatMPIAIJCRL): GRID = 4, 5 class TestMatMPIAIJCRL_G89(TestMatMPIAIJCRL): GRID = 8, 9 # -- AIJCRL + Block ------------- class BaseTestMatAIJCRL_B(BaseTestMatAIJ_B, unittest.TestCase): TYPE = PETSc.Mat.Type.AIJCRL # -- Seq AIJCRL + Block -- class TestMatSeqAIJCRL_B(BaseTestMatAIJCRL_B): COMM = PETSc.COMM_SELF TYPE = PETSc.Mat.Type.SEQAIJCRL # bs = 1 class TestMatSeqAIJCRL_B_G23(TestMatSeqAIJCRL_B): GRID = 2, 3 class TestMatSeqAIJCRL_B_G45(TestMatSeqAIJCRL_B): GRID = 4, 5 class TestMatSeqAIJCRL_B_G89(TestMatSeqAIJCRL_B): GRID = 8, 9 # bs = 2 class TestMatSeqAIJCRL_B_G23_B2(TestMatSeqAIJCRL_B_G23): BSIZE = 2 class TestMatSeqAIJCRL_B_G45_B2(TestMatSeqAIJCRL_B_G45): BSIZE = 2 class TestMatSeqAIJCRL_B_G89_B2(TestMatSeqAIJCRL_B_G89): BSIZE = 2 # bs = 3 class TestMatSeqAIJCRL_B_G23_B3(TestMatSeqAIJCRL_B_G23): BSIZE = 3 class TestMatSeqAIJCRL_B_G45_B3(TestMatSeqAIJCRL_B_G45): BSIZE = 3 class TestMatSeqAIJCRL_B_G89_B3(TestMatSeqAIJCRL_B_G89): BSIZE = 3 # bs = 4 class TestMatSeqAIJCRL_B_G23_B4(TestMatSeqAIJCRL_B_G23): BSIZE = 4 class TestMatSeqAIJCRL_B_G45_B4(TestMatSeqAIJCRL_B_G45): BSIZE = 4 class TestMatSeqAIJCRL_B_G89_B4(TestMatSeqAIJCRL_B_G89): BSIZE = 4 # bs = 5 class TestMatSeqAIJCRL_B_G23_B5(TestMatSeqAIJCRL_B_G23): BSIZE = 5 class TestMatSeqAIJCRL_B_G45_B5(TestMatSeqAIJCRL_B_G45): BSIZE = 5 class TestMatSeqAIJCRL_B_G89_B5(TestMatSeqAIJCRL_B_G89): BSIZE = 5 # -- MPI AIJCRL + Block -- class TestMatMPIAIJCRL_B(BaseTestMatAIJCRL_B): COMM = PETSc.COMM_WORLD TYPE = PETSc.Mat.Type.MPIAIJCRL # bs = 1 class TestMatMPIAIJCRL_B_G23(TestMatMPIAIJCRL_B): GRID = 2, 3 class TestMatMPIAIJCRL_B_G45(TestMatMPIAIJCRL_B): GRID = 4, 5 class TestMatMPIAIJCRL_B_G89(TestMatMPIAIJCRL_B): GRID = 8, 9 # bs = 2 class TestMatMPIAIJCRL_B_G23_B2(TestMatMPIAIJCRL_B_G23): BSIZE = 2 class TestMatMPIAIJCRL_B_G45_B2(TestMatMPIAIJCRL_B_G45): BSIZE = 2 class TestMatMPIAIJCRL_B_G89_B2(TestMatMPIAIJCRL_B_G89): BSIZE = 2 # bs = 3 class TestMatMPIAIJCRL_B_G23_B3(TestMatMPIAIJCRL_B_G23): BSIZE = 3 class TestMatMPIAIJCRL_B_G45_B3(TestMatMPIAIJCRL_B_G45): BSIZE = 3 class TestMatMPIAIJCRL_B_G89_B3(TestMatMPIAIJCRL_B_G89): BSIZE = 3 # bs = 4 class TestMatMPIAIJCRL_B_G23_B4(TestMatMPIAIJCRL_B_G23): BSIZE = 4 class TestMatMPIAIJCRL_B_G45_B4(TestMatMPIAIJCRL_B_G45): BSIZE = 4 class TestMatMPIAIJCRL_B_G89_B4(TestMatMPIAIJCRL_B_G89): BSIZE = 4 # bs = 5 class TestMatMPIAIJCRL_B_G23_B5(TestMatMPIAIJCRL_B_G23): BSIZE = 5 class TestMatMPIAIJCRL_B_G45_B5(TestMatMPIAIJCRL_B_G45): BSIZE = 5 class TestMatMPIAIJCRL_B_G89_B5(TestMatMPIAIJCRL_B_G89): BSIZE = 5 # ----- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_comm.py0000644000175000001440000000572612711377604017426 0ustar dalcinlusers00000000000000from petsc4py import PETSc import unittest # -------------------------------------------------------------------- class TestComm(unittest.TestCase): def testInit(self): comm_null1 = PETSc.Comm() comm_null2 = PETSc.Comm(PETSc.COMM_NULL) comm_world = PETSc.Comm(PETSc.COMM_WORLD) comm_self = PETSc.Comm(PETSc.COMM_SELF) self.assertEqual(comm_null1, PETSc.COMM_NULL) self.assertEqual(comm_null2, PETSc.COMM_NULL) self.assertEqual(comm_world, PETSc.COMM_WORLD) self.assertEqual(comm_self, PETSc.COMM_SELF) def testDupDestr(self): self.assertRaises(ValueError, PETSc.COMM_NULL.duplicate) comm = PETSc.COMM_SELF.duplicate() comm.destroy() self.assertEqual(comm, PETSc.COMM_NULL) del comm comm = PETSc.COMM_WORLD.duplicate() comm.destroy() self.assertEqual(comm, PETSc.COMM_NULL) del comm def testBarrier(self): self.assertRaises(ValueError, PETSc.COMM_NULL.barrier) PETSc.COMM_SELF.barrier() PETSc.COMM_WORLD.barrier() def testSize(self): self.assertRaises(ValueError, PETSc.COMM_NULL.getSize) self.assertTrue(PETSc.COMM_WORLD.getSize() >= 1) self.assertEqual(PETSc.COMM_SELF.getSize(), 1) def testRank(self): self.assertRaises(ValueError, PETSc.COMM_NULL.getRank) self.assertEqual(PETSc.COMM_SELF.getRank(), 0) self.assertTrue(PETSc.COMM_WORLD.getRank() >= 0) def testProperties(self): self.assertEqual(PETSc.COMM_SELF.getSize(), PETSc.COMM_SELF.size) self.assertEqual(PETSc.COMM_SELF.getRank(), PETSc.COMM_SELF.rank) self.assertEqual(PETSc.COMM_WORLD.getSize(), PETSc.COMM_WORLD.size) self.assertEqual(PETSc.COMM_WORLD.getRank(), PETSc.COMM_WORLD.rank) def testCompatMPI4PY(self): try: from mpi4py import MPI except ImportError: return # mpi4py -> petsc4py cn = PETSc.Comm(MPI.COMM_NULL) cs = PETSc.Comm(MPI.COMM_SELF) cw = PETSc.Comm(MPI.COMM_WORLD) self.assertEqual(cn, PETSc.COMM_NULL) self.assertEqual(cs, PETSc.COMM_SELF) self.assertEqual(cw, PETSc.COMM_WORLD) # petsc4py - > mpi4py cn = PETSc.COMM_NULL.tompi4py() self.assertTrue(isinstance(cn, MPI.Comm)) self.assertFalse(cn) cs = PETSc.COMM_SELF.tompi4py() self.assertTrue(isinstance(cs, MPI.Intracomm)) self.assertEqual(cs.Get_size(), 1) self.assertEqual(cs.Get_rank(), 0) cw = PETSc.COMM_WORLD.tompi4py() self.assertTrue(isinstance(cw, MPI.Intracomm)) self.assertEqual(cw.Get_size(), PETSc.COMM_WORLD.getSize()) self.assertEqual(cw.Get_rank(), PETSc.COMM_WORLD.getRank()) # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/test/test_snes_py.py0000644000175000001440000000551512711377604020147 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- from petsc4py import PETSc import unittest from sys import getrefcount # -------------------------------------------------------------------- class MySNES(object): def __init__(self): self.trace = False self.call_log = {} def _log(self, method, *args): self.call_log.setdefault(method, 0) self.call_log[method] += 1 if not self.trace: return clsname = self.__class__.__name__ pargs = [] for a in args: pargs.append(a) if isinstance(a, PETSc.Object): pargs[-1] = type(a).__name__ pargs = tuple(pargs) print ('%-20s' % ('%s.%s%s'% (clsname, method, pargs))) def create(self,*args): self._log('create', *args) def destroy(self,*args): self._log('destroy', *args) if not self.trace: return for k, v in self.call_log.items(): print ('%-20s %2d' % (k, v)) def view(self, snes, viewer): self._log('view', snes, viewer) def setFromOptions(self, snes): OptDB = PETSc.Options(snes) self.trace = OptDB.getBool('trace',self.trace) self._log('setFromOptions',snes) def setUp(self, snes): self._log('setUp', snes) def reset(self, snes): self._log('reset', snes) #def preSolve(self, snes): # self._log('preSolve', snes) # #def postSolve(self, snes): # self._log('postSolve', snes) def preStep(self, snes): self._log('preStep', snes) def postStep(self, snes): self._log('postStep', snes) #def computeFunction(self, snes, x, F): # self._log('computeFunction', snes, x, F) # snes.computeFunction(x, F) # #def computeJacobian(self, snes, x, A, B): # self._log('computeJacobian', snes, x, A, B) # flag = snes.computeJacobian(x, A, B) # return flag # #def linearSolve(self, snes, b, x): # self._log('linearSolve', snes, b, x) # snes.ksp.solve(b,x) # ## return False # not succedd # if snes.ksp.getConvergedReason() < 0: # return False # not succedd # return True # succedd # #def lineSearch(self, snes, x, y, F): # self._log('lineSearch', snes, x, y, F) # x.axpy(-1,y) # snes.computeFunction(x, F) # ## return False # not succedd # return True # succedd from test_snes import BaseTestSNES class TestSNESPython(BaseTestSNES, unittest.TestCase): SNES_TYPE = PETSc.SNES.Type.PYTHON def setUp(self): super(TestSNESPython, self).setUp() self.snes.setPythonContext(MySNES()) # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() # -------------------------------------------------------------------- petsc4py-3.7.0/test/test_snes.py0000644000175000001440000003104712711377604017436 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- from petsc4py import PETSc import unittest from sys import getrefcount # -------------------------------------------------------------------- class Function: def __call__(self, snes, x, f): f[0] = (x[0]*x[0] + x[0]*x[1] - 3.0).item() f[1] = (x[0]*x[1] + x[1]*x[1] - 6.0).item() f.assemble() class Jacobian: def __call__(self, snes, x, J, P): P[0,0] = (2.0*x[0] + x[1]).item() P[0,1] = (x[0]).item() P[1,0] = (x[1]).item() P[1,1] = (x[0] + 2.0*x[1]).item() P.assemble() if J != P: J.assemble() # -------------------------------------------------------------------- class BaseTestSNES(object): SNES_TYPE = None def setUp(self): snes = PETSc.SNES() snes.create(PETSc.COMM_SELF) if self.SNES_TYPE: snes.setType(self.SNES_TYPE) self.snes = snes def tearDown(self): self.snes = None def testGetSetType(self): self.assertEqual(self.snes.getType(), self.SNES_TYPE) self.snes.setType(self.SNES_TYPE) self.assertEqual(self.snes.getType(), self.SNES_TYPE) def testTols(self): tols = self.snes.getTolerances() self.snes.setTolerances(*tols) tnames = ('rtol', 'atol','stol', 'max_it') tolvals = [getattr(self.snes, t) for t in tnames] self.assertEqual(tuple(tols), tuple(tolvals)) def testProperties(self): snes = self.snes # snes.appctx = (1,2,3) self.assertEqual(snes.appctx, (1,2,3)) snes.appctx = None self.assertEqual(snes.appctx, None) # snes.its = 1 self.assertEqual(snes.its, 1) snes.its = 0 self.assertEqual(snes.its, 0) # rh, ih = snes.history self.assertTrue(len(rh)==0) self.assertTrue(len(ih)==0) # reason = PETSc.SNES.ConvergedReason.CONVERGED_ITS snes.reason = reason self.assertEqual(snes.reason, reason) self.assertTrue(snes.converged) self.assertFalse(snes.diverged) self.assertFalse(snes.iterating) reason = PETSc.SNES.ConvergedReason.DIVERGED_MAX_IT snes.reason = reason self.assertEqual(snes.reason, reason) self.assertFalse(snes.converged) self.assertTrue(snes.diverged) self.assertFalse(snes.iterating) reason = PETSc.SNES.ConvergedReason.CONVERGED_ITERATING snes.reason = reason self.assertEqual(snes.reason, reason) self.assertFalse(snes.converged) self.assertFalse(snes.diverged) self.assertTrue(snes.iterating) # self.assertFalse(snes.use_ew) self.assertFalse(snes.use_mf) self.assertFalse(snes.use_fd) def testGetSetFunc(self): r, func = self.snes.getFunction() self.assertFalse(r) self.assertTrue(func is None) r = PETSc.Vec().createSeq(2) func = Function() refcnt = getrefcount(func) self.snes.setFunction(func, r) self.snes.setFunction(func, r) self.assertEqual(getrefcount(func), refcnt + 1) r2, func2 = self.snes.getFunction() self.assertEqual(r, r2) self.assertEqual(func, func2[0]) self.assertEqual(getrefcount(func), refcnt + 1) r3, func3 = self.snes.getFunction() self.assertEqual(r, r3) self.assertEqual(func, func3[0]) self.assertEqual(getrefcount(func), refcnt + 1) def testCompFunc(self): r = PETSc.Vec().createSeq(2) func = Function() self.snes.setFunction(func, r) x, y = r.duplicate(), r.duplicate() x[0], x[1] = [1, 2] self.snes.computeFunction(x, y) self.assertAlmostEqual(abs(y[0]), 0.0) self.assertAlmostEqual(abs(y[1]), 0.0) def testGetSetJac(self): A, P, jac = self.snes.getJacobian() self.assertFalse(A) self.assertFalse(P) self.assertTrue(jac is None) J = PETSc.Mat().create(PETSc.COMM_SELF) J.setSizes([2,2]) J.setType(PETSc.Mat.Type.SEQAIJ) J.setUp() jac = Jacobian() refcnt = getrefcount(jac) self.snes.setJacobian(jac, J) self.snes.setJacobian(jac, J) self.assertEqual(getrefcount(jac), refcnt + 1) J2, P2, jac2 = self.snes.getJacobian() self.assertEqual(J, J2) self.assertEqual(J2, P2) self.assertEqual(jac, jac2[0]) self.assertEqual(getrefcount(jac), refcnt + 1) J3, P3, jac3 = self.snes.getJacobian() self.assertEqual(J, J3) self.assertEqual(J3, P3) self.assertEqual(jac, jac3[0]) self.assertEqual(getrefcount(jac), refcnt + 1) def testCompJac(self): J = PETSc.Mat().create(PETSc.COMM_SELF) J.setSizes([2,2]) J.setType(PETSc.Mat.Type.SEQAIJ) J.setUp() jac = Jacobian() self.snes.setJacobian(jac, J) x = PETSc.Vec().createSeq(2) x[0], x[1] = [1, 2] self.snes.getKSP().getPC() self.snes.computeJacobian(x, J) def testGetSetUpd(self): self.assertTrue(self.snes.getUpdate() is None) upd = lambda snes, it: None refcnt = getrefcount(upd) self.snes.setUpdate(upd) self.assertEqual(getrefcount(upd), refcnt + 1) self.snes.setUpdate(upd) self.assertEqual(getrefcount(upd), refcnt + 1) self.snes.setUpdate(None) self.assertTrue(self.snes.getUpdate() is None) self.assertEqual(getrefcount(upd), refcnt) self.snes.setUpdate(upd) self.assertEqual(getrefcount(upd), refcnt + 1) upd2 = lambda snes, it: None refcnt2 = getrefcount(upd2) self.snes.setUpdate(upd2) self.assertEqual(getrefcount(upd), refcnt) self.assertEqual(getrefcount(upd2), refcnt2 + 1) tmp = self.snes.getUpdate()[0] self.assertTrue(tmp is upd2) self.assertEqual(getrefcount(upd2), refcnt2 + 2) del tmp self.snes.setUpdate(None) self.assertTrue(self.snes.getUpdate() is None) self.assertEqual(getrefcount(upd2), refcnt2) def testGetKSP(self): ksp = self.snes.getKSP() self.assertEqual(ksp.getRefCount(), 2) def testSolve(self): J = PETSc.Mat().create(PETSc.COMM_SELF) J.setSizes([2,2]) J.setType(PETSc.Mat.Type.SEQAIJ) J.setUp() r = PETSc.Vec().createSeq(2) x = PETSc.Vec().createSeq(2) b = PETSc.Vec().createSeq(2) self.snes.setFunction(Function(), r) self.snes.setJacobian(Jacobian(), J) x.setArray([2,3]) b.set(0) self.snes.setConvergenceHistory() self.snes.setFromOptions() self.snes.solve(b, x) rh, ih = self.snes.getConvergenceHistory() self.snes.setConvergenceHistory(0, reset=True) rh, ih = self.snes.getConvergenceHistory() self.assertEqual(len(rh), 0) self.assertEqual(len(ih), 0) self.assertAlmostEqual(abs(x[0]), 1.0) self.assertAlmostEqual(abs(x[1]), 2.0) # XXX this test should not be here ! reason = self.snes.callConvergenceTest(1, 0, 0, 0) self.assertTrue(reason > 0) def testResetAndSolve(self): self.snes.reset() self.testSolve() self.snes.reset() self.testSolve() self.snes.reset() def testSetMonitor(self): reshist = {} def monitor(snes, its, fgnorm): reshist[its] = fgnorm refcnt = getrefcount(monitor) self.snes.setMonitor(monitor) self.assertEqual(getrefcount(monitor), refcnt + 1) self.testSolve() self.assertTrue(len(reshist) > 0) reshist = {} self.snes.cancelMonitor() self.assertEqual(getrefcount(monitor), refcnt) self.testSolve() self.assertTrue(len(reshist) == 0) self.snes.setMonitor(monitor) self.snes.monitor(1, 7) self.assertTrue(reshist[1] == 7) ## Monitor = PETSc.SNES.Monitor ## self.snes.setMonitor(Monitor()) ## self.snes.setMonitor(Monitor.DEFAULT) ## self.snes.setMonitor(Monitor.SOLUTION) ## self.snes.setMonitor(Monitor.RESIDUAL) ## self.snes.setMonitor(Monitor.SOLUTION_UPDATE) def testSetGetStepFails(self): its = self.snes.getIterationNumber() self.assertEqual(its, 0) fails = self.snes.getNonlinearStepFailures() self.assertEqual(fails, 0) fails = self.snes.getMaxNonlinearStepFailures() self.assertEqual(fails, 1) self.snes.setMaxNonlinearStepFailures(5) fails = self.snes.getMaxNonlinearStepFailures() self.assertEqual(fails, 5) self.snes.setMaxNonlinearStepFailures(1) fails = self.snes.getMaxNonlinearStepFailures() self.assertEqual(fails, 1) def testSetGetLinFails(self): its = self.snes.getLinearSolveIterations() self.assertEqual(its, 0) fails = self.snes.getLinearSolveFailures() self.assertEqual(fails, 0) fails = self.snes.getMaxLinearSolveFailures() self.assertEqual(fails, 1) self.snes.setMaxLinearSolveFailures(5) fails = self.snes.getMaxLinearSolveFailures() self.assertEqual(fails, 5) self.snes.setMaxLinearSolveFailures(1) fails = self.snes.getMaxLinearSolveFailures() self.assertEqual(fails, 1) def testEW(self): self.snes.setUseEW(False) self.assertFalse(self.snes.getUseEW()) self.snes.setUseEW(True) self.assertTrue(self.snes.getUseEW()) params = self.snes.getParamsEW() params['version'] = 1 self.snes.setParamsEW(**params) params = self.snes.getParamsEW() self.assertEqual(params['version'], 1) params['version'] = PETSc.DEFAULT self.snes.setParamsEW(**params) params = self.snes.getParamsEW() self.assertEqual(params['version'], 1) def testMF(self): #self.snes.setOptionsPrefix('MF-') #opts = PETSc.Options(self.snes) #opts['mat_mffd_type'] = 'ds' #opts['snes_monitor'] = 'stdout' #opts['ksp_monitor'] = 'stdout' #opts['snes_view'] = 'stdout' J = PETSc.Mat().create(PETSc.COMM_SELF) J.setSizes([2,2]) J.setType(PETSc.Mat.Type.SEQAIJ) J.setUp() r = PETSc.Vec().createSeq(2) x = PETSc.Vec().createSeq(2) b = PETSc.Vec().createSeq(2) fun = Function() jac = Jacobian() self.snes.setFunction(fun, r) self.snes.setJacobian(jac, J) self.assertFalse(self.snes.getUseMF()) self.snes.setUseMF(False) self.assertFalse(self.snes.getUseMF()) self.snes.setUseMF(True) self.assertTrue(self.snes.getUseMF()) self.snes.setFromOptions() x.setArray([2,3]) b.set(0) self.snes.solve(b, x) self.assertAlmostEqual(abs(x[0]), 1.0) self.assertAlmostEqual(abs(x[1]), 2.0) def testFDColor(self): J = PETSc.Mat().create(PETSc.COMM_SELF) J.setSizes([2,2]) J.setType(PETSc.Mat.Type.SEQAIJ) J.setUp() r = PETSc.Vec().createSeq(2) x = PETSc.Vec().createSeq(2) b = PETSc.Vec().createSeq(2) fun = Function() jac = Jacobian() self.snes.setFunction(fun, r) self.snes.setJacobian(jac, J) self.assertFalse(self.snes.getUseFD()) jac(self.snes, x, J, J) self.snes.setUseFD(False) self.assertFalse(self.snes.getUseFD()) self.snes.setUseFD(True) self.assertTrue(self.snes.getUseFD()) self.snes.setFromOptions() x.setArray([2,3]) b.set(0) self.snes.solve(b, x) self.assertAlmostEqual(abs(x[0]), 1.0) self.assertAlmostEqual(abs(x[1]), 2.0) # -------------------------------------------------------------------- class TestSNESLS(BaseTestSNES, unittest.TestCase): SNES_TYPE = PETSc.SNES.Type.NEWTONLS class TestSNESTR(BaseTestSNES, unittest.TestCase): SNES_TYPE = PETSc.SNES.Type.NEWTONTR ## class TestSNESTEST(BaseTestSNES, unittest.TestCase): ## SNES_TYPE = PETSc.SNES.Type.TEST ## def setUp(self): ## super(TestSNESTEST, self).setUp() ## import tempfile ## self.stdout = tempfile.TemporaryFile(mode='w+') ## PETSc.SetStdout(self.stdout) ## def tearDown(self): ## super(TestSNESTEST, self).tearDown() ## import sys ## PETSc.SetStdout(sys.stdout) ## self.stdout.flush() ## self.stdout.close() ## self.stdout = None # -------------------------------------------------------------------- if __name__ == '__main__': unittest.main() petsc4py-3.7.0/src/0000755000175000001440000000000012711405164014651 5ustar dalcinlusers00000000000000petsc4py-3.7.0/src/petsc4py.PETSc.c0000644000175000001440005145372512711405031017524 0ustar dalcinlusers00000000000000/* Generated by Cython 0.24 */ #define PY_SSIZE_T_CLEAN #include "Python.h" #ifndef Py_PYTHON_H #error Python headers needed to compile C extensions, please install development version of Python. #elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03020000) #error Cython requires Python 2.6+ or Python 3.2+. #else #define CYTHON_ABI "0_24" #include #ifndef offsetof #define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) #endif #if !defined(WIN32) && 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PyMethod_New(func, self) : PyInstanceMethod_New(func)) #else #define __Pyx_PyMethod_New(func, self, klass) PyMethod_New(func, self, klass) #endif #if PY_VERSION_HEX >= 0x030500B1 #define __Pyx_PyAsyncMethodsStruct PyAsyncMethods #define __Pyx_PyType_AsAsync(obj) (Py_TYPE(obj)->tp_as_async) #elif CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 typedef struct { unaryfunc am_await; unaryfunc am_aiter; unaryfunc am_anext; } __Pyx_PyAsyncMethodsStruct; #define __Pyx_PyType_AsAsync(obj) ((__Pyx_PyAsyncMethodsStruct*) (Py_TYPE(obj)->tp_reserved)) #else #define __Pyx_PyType_AsAsync(obj) NULL #endif #ifndef CYTHON_RESTRICT #if defined(__GNUC__) #define CYTHON_RESTRICT __restrict__ #elif defined(_MSC_VER) && _MSC_VER >= 1400 #define CYTHON_RESTRICT __restrict #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L #define CYTHON_RESTRICT restrict #else #define CYTHON_RESTRICT #endif #endif #define __Pyx_void_to_None(void_result) ((void)(void_result), Py_INCREF(Py_None), Py_None) #ifndef CYTHON_INLINE #if defined(__GNUC__) #define CYTHON_INLINE __inline__ #elif defined(_MSC_VER) #define CYTHON_INLINE __inline #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L #define CYTHON_INLINE inline #else #define CYTHON_INLINE #endif #endif #if defined(WIN32) || defined(MS_WINDOWS) #define _USE_MATH_DEFINES #endif #include #ifdef NAN #define __PYX_NAN() ((float) NAN) #else static CYTHON_INLINE float __PYX_NAN() { float value; memset(&value, 0xFF, sizeof(value)); return value; } #endif #define __PYX_ERR(f_index, lineno, Ln_error) \ { \ __pyx_filename = __pyx_f[f_index]; __pyx_lineno = lineno; __pyx_clineno = __LINE__; goto Ln_error; \ } #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) #else #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y) #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y) #endif #ifndef __PYX_EXTERN_C #ifdef __cplusplus #define __PYX_EXTERN_C extern "C" #else #define __PYX_EXTERN_C extern #endif #endif #define __PYX_HAVE__petsc4py__PETSc #define __PYX_HAVE_API__petsc4py__PETSc #include "petsc.h" #include "compat.h" #include "custom.h" #include "scalar.h" #include "petsc4py/numpy.h" #include "cython.h" #include "pep3118.h" #include "libpetsc4py.h" #include "stdio.h" #include "stdlib.h" #include "string.h" #include "initpkg.h" #ifdef _OPENMP #include #endif /* _OPENMP */ #ifdef PYREX_WITHOUT_ASSERTIONS #define CYTHON_WITHOUT_ASSERTIONS #endif #ifndef CYTHON_UNUSED # if defined(__GNUC__) # if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) # define CYTHON_UNUSED __attribute__ ((__unused__)) # else # define CYTHON_UNUSED # endif # elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) # define CYTHON_UNUSED __attribute__ ((__unused__)) # else # define CYTHON_UNUSED # endif #endif #ifndef CYTHON_NCP_UNUSED # if CYTHON_COMPILING_IN_CPYTHON # define CYTHON_NCP_UNUSED # else # define CYTHON_NCP_UNUSED CYTHON_UNUSED # endif #endif typedef struct {PyObject **p; const char *s; const Py_ssize_t n; const char* encoding; const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry; #define __PYX_DEFAULT_STRING_ENCODING_IS_ASCII 0 #define __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT 0 #define __PYX_DEFAULT_STRING_ENCODING "" #define __Pyx_PyObject_FromString __Pyx_PyBytes_FromString #define __Pyx_PyObject_FromStringAndSize __Pyx_PyBytes_FromStringAndSize #define __Pyx_uchar_cast(c) ((unsigned char)c) #define __Pyx_long_cast(x) ((long)x) #define __Pyx_fits_Py_ssize_t(v, type, is_signed) (\ (sizeof(type) < sizeof(Py_ssize_t)) ||\ (sizeof(type) > sizeof(Py_ssize_t) &&\ likely(v < (type)PY_SSIZE_T_MAX ||\ v == (type)PY_SSIZE_T_MAX) &&\ (!is_signed || likely(v > (type)PY_SSIZE_T_MIN ||\ v == (type)PY_SSIZE_T_MIN))) ||\ (sizeof(type) == sizeof(Py_ssize_t) &&\ (is_signed || likely(v < (type)PY_SSIZE_T_MAX ||\ v == (type)PY_SSIZE_T_MAX))) ) #if defined (__cplusplus) && __cplusplus >= 201103L #include #define __Pyx_sst_abs(value) std::abs(value) #elif SIZEOF_INT >= SIZEOF_SIZE_T #define __Pyx_sst_abs(value) abs(value) #elif SIZEOF_LONG >= SIZEOF_SIZE_T #define __Pyx_sst_abs(value) labs(value) #elif defined (_MSC_VER) && defined (_M_X64) #define __Pyx_sst_abs(value) _abs64(value) #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L #define __Pyx_sst_abs(value) llabs(value) #elif defined (__GNUC__) #define __Pyx_sst_abs(value) __builtin_llabs(value) #else #define __Pyx_sst_abs(value) ((value<0) ? -value : value) #endif static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject*); static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); #define __Pyx_PyByteArray_FromString(s) PyByteArray_FromStringAndSize((const char*)s, strlen((const char*)s)) #define __Pyx_PyByteArray_FromStringAndSize(s, l) PyByteArray_FromStringAndSize((const char*)s, l) #define __Pyx_PyBytes_FromString PyBytes_FromString #define __Pyx_PyBytes_FromStringAndSize PyBytes_FromStringAndSize static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*); #if PY_MAJOR_VERSION < 3 #define __Pyx_PyStr_FromString __Pyx_PyBytes_FromString #define __Pyx_PyStr_FromStringAndSize __Pyx_PyBytes_FromStringAndSize #else #define __Pyx_PyStr_FromString __Pyx_PyUnicode_FromString #define __Pyx_PyStr_FromStringAndSize __Pyx_PyUnicode_FromStringAndSize #endif #define __Pyx_PyObject_AsSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_AsUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_FromCString(s) __Pyx_PyObject_FromString((const char*)s) #define __Pyx_PyBytes_FromCString(s) __Pyx_PyBytes_FromString((const char*)s) #define __Pyx_PyByteArray_FromCString(s) __Pyx_PyByteArray_FromString((const char*)s) #define __Pyx_PyStr_FromCString(s) __Pyx_PyStr_FromString((const char*)s) #define __Pyx_PyUnicode_FromCString(s) __Pyx_PyUnicode_FromString((const char*)s) #if PY_MAJOR_VERSION < 3 static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) { const Py_UNICODE *u_end = u; while (*u_end++) ; return (size_t)(u_end - u - 1); } #else #define __Pyx_Py_UNICODE_strlen Py_UNICODE_strlen #endif #define __Pyx_PyUnicode_FromUnicode(u) PyUnicode_FromUnicode(u, __Pyx_Py_UNICODE_strlen(u)) #define __Pyx_PyUnicode_FromUnicodeAndLength PyUnicode_FromUnicode #define __Pyx_PyUnicode_AsUnicode PyUnicode_AsUnicode #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) #define __Pyx_Owned_Py_None(b) __Pyx_NewRef(Py_None) #define __Pyx_PyBool_FromLong(b) ((b) ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False)) static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*); static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x); static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*); static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t); #if CYTHON_COMPILING_IN_CPYTHON #define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x)) #else #define __pyx_PyFloat_AsDouble(x) PyFloat_AsDouble(x) #endif #define __pyx_PyFloat_AsFloat(x) ((float) __pyx_PyFloat_AsDouble(x)) #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyNumber_Int(x) (PyLong_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Long(x)) #else #define __Pyx_PyNumber_Int(x) (PyInt_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Int(x)) #endif #define __Pyx_PyNumber_Float(x) (PyFloat_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Float(x)) #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII static int __Pyx_sys_getdefaultencoding_not_ascii; static int __Pyx_init_sys_getdefaultencoding_params(void) { PyObject* sys; PyObject* default_encoding = NULL; PyObject* ascii_chars_u = NULL; PyObject* ascii_chars_b = NULL; const char* default_encoding_c; sys = PyImport_ImportModule("sys"); if (!sys) goto bad; default_encoding = PyObject_CallMethod(sys, (char*) "getdefaultencoding", NULL); Py_DECREF(sys); if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); if (!default_encoding_c) goto bad; if (strcmp(default_encoding_c, "ascii") == 0) { __Pyx_sys_getdefaultencoding_not_ascii = 0; } else { char ascii_chars[128]; int c; for (c = 0; c < 128; c++) { ascii_chars[c] = c; } __Pyx_sys_getdefaultencoding_not_ascii = 1; ascii_chars_u = PyUnicode_DecodeASCII(ascii_chars, 128, NULL); if (!ascii_chars_u) goto bad; ascii_chars_b = PyUnicode_AsEncodedString(ascii_chars_u, default_encoding_c, NULL); if (!ascii_chars_b || !PyBytes_Check(ascii_chars_b) || memcmp(ascii_chars, PyBytes_AS_STRING(ascii_chars_b), 128) != 0) { PyErr_Format( PyExc_ValueError, "This module compiled with c_string_encoding=ascii, but default encoding '%.200s' is not a superset of ascii.", default_encoding_c); goto bad; } Py_DECREF(ascii_chars_u); Py_DECREF(ascii_chars_b); } Py_DECREF(default_encoding); return 0; bad: Py_XDECREF(default_encoding); Py_XDECREF(ascii_chars_u); Py_XDECREF(ascii_chars_b); return -1; } #endif #if __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT && PY_MAJOR_VERSION >= 3 #define __Pyx_PyUnicode_FromStringAndSize(c_str, size) PyUnicode_DecodeUTF8(c_str, size, NULL) #else #define __Pyx_PyUnicode_FromStringAndSize(c_str, size) PyUnicode_Decode(c_str, size, __PYX_DEFAULT_STRING_ENCODING, NULL) #if __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT static char* __PYX_DEFAULT_STRING_ENCODING; static int __Pyx_init_sys_getdefaultencoding_params(void) { PyObject* sys; PyObject* default_encoding = NULL; char* default_encoding_c; sys = PyImport_ImportModule("sys"); if (!sys) goto bad; default_encoding = PyObject_CallMethod(sys, (char*) (const char*) "getdefaultencoding", NULL); Py_DECREF(sys); if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); if (!default_encoding_c) goto bad; __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c)); if (!__PYX_DEFAULT_STRING_ENCODING) goto bad; strcpy(__PYX_DEFAULT_STRING_ENCODING, default_encoding_c); Py_DECREF(default_encoding); return 0; bad: Py_XDECREF(default_encoding); return -1; } #endif #endif /* Test for GCC > 2.95 */ #if defined(__GNUC__) && (__GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95))) #define likely(x) __builtin_expect(!!(x), 1) #define unlikely(x) __builtin_expect(!!(x), 0) #else /* !__GNUC__ or GCC < 2.95 */ #define likely(x) (x) #define unlikely(x) (x) #endif /* __GNUC__ */ static PyObject *__pyx_m; static PyObject *__pyx_d; static PyObject *__pyx_b; static PyObject *__pyx_empty_tuple; static PyObject *__pyx_empty_bytes; static PyObject *__pyx_empty_unicode; static int __pyx_lineno; static int __pyx_clineno = 0; static const char * __pyx_cfilenm= __FILE__; static const char *__pyx_filename; static const char *__pyx_f[] = { "PETSc/Const.pyx", "PETSc/Error.pyx", "PETSc/petscdef.pxi", "PETSc/petscopt.pxi", "PETSc/petscis.pxi", "PETSc/petscvec.pxi", "PETSc/petscmat.pxi", "PETSc/petscdmda.pxi", "PETSc/petscdmshell.pxi", "PETSc/Comm.pyx", "PETSc/Object.pyx", "PETSc/PETSc.pyx", "PETSc/arraynpy.pxi", "PETSc/petscmpi.pxi", "PETSc/petscsys.pxi", "PETSc/petsclog.pxi", "PETSc/petscobj.pxi", "PETSc/petscvwr.pxi", "PETSc/petscksp.pxi", "PETSc/petscsnes.pxi", "PETSc/petscts.pxi", "PETSc/petsctao.pxi", "PETSc/petscdm.pxi", "PETSc/petscdmcomposite.pxi", "PETSc/Options.pyx", "PETSc/Sys.pyx", "PETSc/Log.pyx", "PETSc/Viewer.pyx", "PETSc/Random.pyx", "PETSc/IS.pyx", "PETSc/Vec.pyx", "PETSc/Scatter.pyx", "PETSc/Section.pyx", "PETSc/Mat.pyx", "PETSc/PC.pyx", "PETSc/KSP.pyx", "PETSc/SNES.pyx", "PETSc/TS.pyx", "PETSc/TAO.pyx", "PETSc/AO.pyx", "PETSc/DM.pyx", "PETSc/DMDA.pyx", "PETSc/DMPlex.pyx", "PETSc/DMComposite.pyx", "PETSc/DMShell.pyx", "PETSc/SF.pyx", "PETSc/Partitioner.pyx", "PETSc/CAPI.pyx", "petsc4py.PETSc.pyx", }; /*--- Type declarations ---*/ struct PyPetscCommObject; struct PyPetscObjectObject; struct PyPetscViewerObject; struct PyPetscRandomObject; struct PyPetscISObject; struct PyPetscLGMapObject; struct PyPetscSFObject; struct PyPetscVecObject; struct PyPetscScatterObject; struct PyPetscSectionObject; struct PyPetscMatObject; struct PyPetscNullSpaceObject; struct PyPetscPCObject; struct PyPetscKSPObject; struct PyPetscSNESObject; struct PyPetscTSObject; struct PyPetscTAOObject; struct PyPetscAOObject; struct PyPetscDMObject; struct PyPetscPartitionerObject; struct __pyx_obj_8petsc4py_5PETSc__IS_buffer; struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer; struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm; struct __pyx_obj_8petsc4py_5PETSc__Mat_Stencil; struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array; struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access; struct __pyx_obj_8petsc4py_5PETSc_Options; struct __pyx_obj_8petsc4py_5PETSc_Sys; struct __pyx_obj_8petsc4py_5PETSc_Log; struct __pyx_obj_8petsc4py_5PETSc_LogStage; struct __pyx_obj_8petsc4py_5PETSc_LogClass; struct __pyx_obj_8petsc4py_5PETSc_LogEvent; struct __pyx_obj_8petsc4py_5PETSc_ViewerHDF5; struct __pyx_obj_8petsc4py_5PETSc_DMDA; struct __pyx_obj_8petsc4py_5PETSc_DMPlex; struct __pyx_obj_8petsc4py_5PETSc_DMComposite; struct __pyx_obj_8petsc4py_5PETSc_DMShell; struct __pyx_opt_args_8petsc4py_5PETSc_getprefix; /* "PETSc/petscopt.pxi":104 * * * cdef enum PetscOptType: # <<<<<<<<<<<<<< * OPT_BOOL * OPT_INT */ enum __pyx_t_8petsc4py_5PETSc_PetscOptType { __pyx_e_8petsc4py_5PETSc_OPT_BOOL, __pyx_e_8petsc4py_5PETSc_OPT_INT, __pyx_e_8petsc4py_5PETSc_OPT_REAL, __pyx_e_8petsc4py_5PETSc_OPT_SCALAR, __pyx_e_8petsc4py_5PETSc_OPT_STRING }; /* "PETSc/petscopt.pxi":39 * # * * cdef getprefix(prefix, deft=None): # <<<<<<<<<<<<<< * if prefix is None: * prefix = deft */ struct __pyx_opt_args_8petsc4py_5PETSc_getprefix { int __pyx_n; PyObject *deft; }; /* "PETSc/petscmpi.pxi":36 * void *Cython_ImportFunction(object, char[], char[]) except? NULL * * ctypedef MPI_Comm* PyMPICommGet(object) except NULL # <<<<<<<<<<<<<< * ctypedef object PyMPICommNew(MPI_Comm) * */ typedef MPI_Comm *__pyx_t_8petsc4py_5PETSc_PyMPICommGet(PyObject *); /* "PETSc/petscmpi.pxi":37 * * ctypedef MPI_Comm* PyMPICommGet(object) except NULL * ctypedef object PyMPICommNew(MPI_Comm) # <<<<<<<<<<<<<< * * cdef inline MPI_Comm mpi4py_Comm_Get(object comm) except *: */ typedef PyObject *__pyx_t_8petsc4py_5PETSc_PyMPICommNew(MPI_Comm); /* "PETSc/petscvec.pxi":288 * # -------------------------------------------------------------------- * * ctypedef int VecSetValuesFcn(PetscVec,PetscInt,const_PetscInt[], # <<<<<<<<<<<<<< * const_PetscScalar[],PetscInsertMode) * */ typedef int __pyx_t_8petsc4py_5PETSc_VecSetValuesFcn(Vec, PetscInt, const PetscInt *, const PetscScalar *, InsertMode); /* "PETSc/petscmat.pxi":737 * # ----------------------------------------------------------------------------- * * ctypedef int MatSetValuesFcn(PetscMat,PetscInt,const_PetscInt[], # <<<<<<<<<<<<<< * PetscInt,const_PetscInt[], * const_PetscScalar[],PetscInsertMode) */ typedef int __pyx_t_8petsc4py_5PETSc_MatSetValuesFcn(Mat, PetscInt, const PetscInt *, PetscInt, const PetscInt *, const PetscScalar *, InsertMode); /* "PETSc/petscdmshell.pxi":1 * ctypedef int (*PetscDMShellXToYFunction)(PetscDM, # <<<<<<<<<<<<<< * PetscVec, * PetscInsertMode, */ typedef int (*__pyx_t_8petsc4py_5PETSc_PetscDMShellXToYFunction)(DM, Vec, InsertMode, Vec); /* "petsc4py/PETSc.pxd":70 * # -------------------------------------------------------------------- * * ctypedef public api class Comm [ # <<<<<<<<<<<<<< * type PyPetscComm_Type, * object PyPetscCommObject, */ struct PyPetscCommObject { PyObject_HEAD MPI_Comm comm; int isdup; PyObject *base; }; typedef struct PyPetscCommObject PyPetscCommObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscComm_Type; /* "petsc4py/PETSc.pxd":78 * cdef object base * * ctypedef public api class Object [ # <<<<<<<<<<<<<< * type PyPetscObject_Type, * object PyPetscObjectObject, */ struct PyPetscObjectObject { PyObject_HEAD struct __pyx_vtabstruct_8petsc4py_5PETSc_Object *__pyx_vtab; PyObject *__weakref__; PyObject *__pyx___dummy__; PetscObject oval; PetscObject *obj; }; typedef struct PyPetscObjectObject PyPetscObjectObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscObject_Type; /* "petsc4py/PETSc.pxd":90 * cdef object get_dict(self) * * ctypedef public api class Viewer(Object) [ # <<<<<<<<<<<<<< * type PyPetscViewer_Type, * object PyPetscViewerObject, */ struct PyPetscViewerObject { struct PyPetscObjectObject __pyx_base; PetscViewer vwr; }; typedef struct PyPetscViewerObject PyPetscViewerObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscViewer_Type; /* "petsc4py/PETSc.pxd":96 * cdef PetscViewer vwr * * ctypedef public api class Random(Object) [ # <<<<<<<<<<<<<< * type PyPetscRandom_Type, * object PyPetscRandomObject, */ struct PyPetscRandomObject { struct PyPetscObjectObject __pyx_base; PetscRandom rnd; }; typedef struct PyPetscRandomObject PyPetscRandomObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscRandom_Type; /* "petsc4py/PETSc.pxd":102 * cdef PetscRandom rnd * * ctypedef public api class IS(Object) [ # <<<<<<<<<<<<<< * type PyPetscIS_Type, * object PyPetscISObject, */ struct PyPetscISObject { struct PyPetscObjectObject __pyx_base; IS iset; }; typedef struct PyPetscISObject PyPetscISObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscIS_Type; /* "petsc4py/PETSc.pxd":108 * cdef PetscIS iset * * ctypedef public api class LGMap(Object) [ # <<<<<<<<<<<<<< * type PyPetscLGMap_Type, * object PyPetscLGMapObject, */ struct PyPetscLGMapObject { struct PyPetscObjectObject __pyx_base; ISLocalToGlobalMapping lgm; }; typedef struct PyPetscLGMapObject PyPetscLGMapObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscLGMap_Type; /* "petsc4py/PETSc.pxd":114 * cdef PetscLGMap lgm * * ctypedef public api class SF(Object) [ # <<<<<<<<<<<<<< * type PyPetscSF_Type, * object PyPetscSFObject, */ struct PyPetscSFObject { struct PyPetscObjectObject __pyx_base; PetscSF sf; }; typedef struct PyPetscSFObject PyPetscSFObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscSF_Type; /* "petsc4py/PETSc.pxd":120 * cdef PetscSF sf * * ctypedef public api class Vec(Object) [ # <<<<<<<<<<<<<< * type PyPetscVec_Type, * object PyPetscVecObject, */ struct PyPetscVecObject { struct PyPetscObjectObject __pyx_base; Vec vec; }; typedef struct PyPetscVecObject PyPetscVecObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscVec_Type; /* "petsc4py/PETSc.pxd":126 * cdef PetscVec vec * * ctypedef public api class Scatter(Object) [ # <<<<<<<<<<<<<< * type PyPetscScatter_Type, * object PyPetscScatterObject, */ struct PyPetscScatterObject { struct PyPetscObjectObject __pyx_base; VecScatter sct; }; typedef struct PyPetscScatterObject PyPetscScatterObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscScatter_Type; /* "petsc4py/PETSc.pxd":132 * cdef PetscScatter sct * * ctypedef public api class Section(Object) [ # <<<<<<<<<<<<<< * type PyPetscSection_Type, * object PyPetscSectionObject, */ struct PyPetscSectionObject { struct PyPetscObjectObject __pyx_base; PetscSection sec; }; typedef struct PyPetscSectionObject PyPetscSectionObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscSection_Type; /* "petsc4py/PETSc.pxd":138 * cdef PetscSection sec * * ctypedef public api class Mat(Object) [ # <<<<<<<<<<<<<< * type PyPetscMat_Type, * object PyPetscMatObject, */ struct PyPetscMatObject { struct PyPetscObjectObject __pyx_base; Mat mat; }; typedef struct PyPetscMatObject PyPetscMatObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscMat_Type; /* "petsc4py/PETSc.pxd":144 * cdef PetscMat mat * * ctypedef public api class NullSpace(Object) [ # <<<<<<<<<<<<<< * type PyPetscNullSpace_Type, * object PyPetscNullSpaceObject, */ struct PyPetscNullSpaceObject { struct PyPetscObjectObject __pyx_base; MatNullSpace nsp; }; typedef struct PyPetscNullSpaceObject PyPetscNullSpaceObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscNullSpace_Type; /* "petsc4py/PETSc.pxd":150 * cdef PetscNullSpace nsp * * ctypedef public api class PC(Object) [ # <<<<<<<<<<<<<< * type PyPetscPC_Type, * object PyPetscPCObject, */ struct PyPetscPCObject { struct PyPetscObjectObject __pyx_base; PC pc; }; typedef struct PyPetscPCObject PyPetscPCObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscPC_Type; /* "petsc4py/PETSc.pxd":156 * cdef PetscPC pc * * ctypedef public api class KSP(Object) [ # <<<<<<<<<<<<<< * type PyPetscKSP_Type, * object PyPetscKSPObject, */ struct PyPetscKSPObject { struct PyPetscObjectObject __pyx_base; KSP ksp; }; typedef struct PyPetscKSPObject PyPetscKSPObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscKSP_Type; /* "petsc4py/PETSc.pxd":162 * cdef PetscKSP ksp * * ctypedef public api class SNES(Object) [ # <<<<<<<<<<<<<< * type PyPetscSNES_Type, * object PyPetscSNESObject, */ struct PyPetscSNESObject { struct PyPetscObjectObject __pyx_base; SNES snes; }; typedef struct PyPetscSNESObject PyPetscSNESObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscSNES_Type; /* "petsc4py/PETSc.pxd":168 * cdef PetscSNES snes * * ctypedef public api class TS(Object) [ # <<<<<<<<<<<<<< * type PyPetscTS_Type, * object PyPetscTSObject, */ struct PyPetscTSObject { struct PyPetscObjectObject __pyx_base; TS ts; }; typedef struct PyPetscTSObject PyPetscTSObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscTS_Type; /* "petsc4py/PETSc.pxd":174 * cdef PetscTS ts * * ctypedef public api class TAO(Object) [ # <<<<<<<<<<<<<< * type PyPetscTAO_Type, * object PyPetscTAOObject, */ struct PyPetscTAOObject { struct PyPetscObjectObject __pyx_base; Tao tao; }; typedef struct PyPetscTAOObject PyPetscTAOObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscTAO_Type; /* "petsc4py/PETSc.pxd":180 * cdef PetscTAO tao * * ctypedef public api class AO(Object) [ # <<<<<<<<<<<<<< * type PyPetscAO_Type, * object PyPetscAOObject, */ struct PyPetscAOObject { struct PyPetscObjectObject __pyx_base; AO ao; }; typedef struct PyPetscAOObject PyPetscAOObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscAO_Type; /* "petsc4py/PETSc.pxd":186 * cdef PetscAO ao * * ctypedef public api class DM(Object) [ # <<<<<<<<<<<<<< * type PyPetscDM_Type, * object PyPetscDMObject, */ struct PyPetscDMObject { struct PyPetscObjectObject __pyx_base; DM dm; }; typedef struct PyPetscDMObject PyPetscDMObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscDM_Type; /* "petsc4py/PETSc.pxd":192 * cdef PetscDM dm * * ctypedef public api class Partitioner(Object) [ # <<<<<<<<<<<<<< * type PyPetscPartitioner_Type, * object PyPetscPartitionerObject, */ struct PyPetscPartitionerObject { struct PyPetscObjectObject __pyx_base; PetscPartitioner part; }; typedef struct PyPetscPartitionerObject PyPetscPartitionerObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscPartitioner_Type; /* "PETSc/petscis.pxi":113 * # -------------------------------------------------------------------- * * cdef class _IS_buffer: # <<<<<<<<<<<<<< * * cdef PetscIS iset */ struct __pyx_obj_8petsc4py_5PETSc__IS_buffer { PyObject_HEAD struct __pyx_vtabstruct_8petsc4py_5PETSc__IS_buffer *__pyx_vtab; IS iset; PetscInt size; const PetscInt *data; int hasarray; }; /* "PETSc/petscvec.pxi":413 * return 0 * * cdef class _Vec_buffer: # <<<<<<<<<<<<<< * * cdef PetscVec vec */ struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer { PyObject_HEAD struct __pyx_vtabstruct_8petsc4py_5PETSc__Vec_buffer *__pyx_vtab; Vec vec; PetscInt size; PetscScalar *data; int readonly; int hasarray; }; /* "PETSc/petscvec.pxi":533 * # -------------------------------------------------------------------- * * cdef class _Vec_LocalForm: # <<<<<<<<<<<<<< * * "Context manager for `Vec` local form" */ struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm { PyObject_HEAD struct PyPetscVecObject *gvec; struct PyPetscVecObject *lvec; }; /* "PETSc/petscmat.pxi":1017 * * #@cython.internal * cdef class _Mat_Stencil: # <<<<<<<<<<<<<< * cdef PetscMatStencil stencil * property i: */ struct __pyx_obj_8petsc4py_5PETSc__Mat_Stencil { PyObject_HEAD MatStencil stencil; }; /* "PETSc/petscdmda.pxi":198 * # -------------------------------------------------------------------- * * cdef class _DMDA_Vec_array(object): # <<<<<<<<<<<<<< * * cdef _Vec_buffer vecbuf */ struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array { PyObject_HEAD struct __pyx_vtabstruct_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_vtab; struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *vecbuf; PyObject *starts; PyObject *sizes; PyObject *shape; PyObject *strides; PyArrayObject *array; }; /* "PETSc/petscdmcomposite.pxi":17 * int DMCompositeGetISLocalToGlobalMappings(PetscDM,PetscLGMap**) * * cdef class _DMComposite_access: # <<<<<<<<<<<<<< * cdef PetscDM dm * cdef PetscVec gvec */ struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access { PyObject_HEAD DM dm; Vec gvec; PetscInt nlocs; PetscInt *locs; Vec *vecs; PyObject *locs_mem; PyObject *vecs_mem; PyObject *access; }; /* "PETSc/Options.pyx":3 * # -------------------------------------------------------------------- * * cdef class Options: # <<<<<<<<<<<<<< * * cdef PetscOptions opt */ struct __pyx_obj_8petsc4py_5PETSc_Options { PyObject_HEAD PetscOptions opt; PyObject *_prefix; }; /* "PETSc/Sys.pyx":3 * # -------------------------------------------------------------------- * * cdef class Sys: # <<<<<<<<<<<<<< * * @classmethod */ struct __pyx_obj_8petsc4py_5PETSc_Sys { PyObject_HEAD }; /* "PETSc/Log.pyx":3 * # -------------------------------------------------------------------- * * cdef class Log: # <<<<<<<<<<<<<< * * @classmethod */ struct __pyx_obj_8petsc4py_5PETSc_Log { PyObject_HEAD }; /* "PETSc/Log.pyx":95 * # -------------------------------------------------------------------- * * cdef class LogStage: # <<<<<<<<<<<<<< * * cdef readonly PetscLogStage id */ struct __pyx_obj_8petsc4py_5PETSc_LogStage { PyObject_HEAD PetscLogStage id; }; /* "PETSc/Log.pyx":191 * # -------------------------------------------------------------------- * * cdef class LogClass: # <<<<<<<<<<<<<< * * cdef readonly PetscLogClass id */ struct __pyx_obj_8petsc4py_5PETSc_LogClass { PyObject_HEAD PetscClassId id; }; /* "PETSc/Log.pyx":253 * # -------------------------------------------------------------------- * * cdef class LogEvent: # <<<<<<<<<<<<<< * * cdef readonly PetscLogEvent id */ struct __pyx_obj_8petsc4py_5PETSc_LogEvent { PyObject_HEAD PetscLogEvent id; }; /* "PETSc/Viewer.pyx":322 * # -------------------------------------------------------------------- * * cdef class ViewerHDF5(Viewer): # <<<<<<<<<<<<<< * * def create(self, name, mode=None, comm=None): */ struct __pyx_obj_8petsc4py_5PETSc_ViewerHDF5 { struct PyPetscViewerObject __pyx_base; }; /* "PETSc/DMDA.pyx":17 * # -------------------------------------------------------------------- * * cdef class DMDA(DM): # <<<<<<<<<<<<<< * * StencilType = DMDAStencilType */ struct __pyx_obj_8petsc4py_5PETSc_DMDA { struct PyPetscDMObject __pyx_base; }; /* "PETSc/DMPlex.pyx":3 * # -------------------------------------------------------------------- * * cdef class DMPlex(DM): # <<<<<<<<<<<<<< * * def create(self, comm=None): */ struct __pyx_obj_8petsc4py_5PETSc_DMPlex { struct PyPetscDMObject __pyx_base; }; /* "PETSc/DMComposite.pyx":3 * # -------------------------------------------------------------------- * * cdef class DMComposite(DM): # <<<<<<<<<<<<<< * * def create(self, comm=None): */ struct __pyx_obj_8petsc4py_5PETSc_DMComposite { struct PyPetscDMObject __pyx_base; }; /* "PETSc/DMShell.pyx":1 * cdef class DMShell(DM): # <<<<<<<<<<<<<< * * def create(self, comm=None): */ struct __pyx_obj_8petsc4py_5PETSc_DMShell { struct PyPetscDMObject __pyx_base; }; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscObject_Type; /* "PETSc/Object.pyx":3 * # -------------------------------------------------------------------- * * cdef class Object: # <<<<<<<<<<<<<< * * # --- special methods --- */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Object { PyObject *(*get_attr)(struct PyPetscObjectObject *, char *); PyObject *(*set_attr)(struct PyPetscObjectObject *, char *, PyObject *); PyObject *(*get_dict)(struct PyPetscObjectObject *); }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Object *__pyx_vtabptr_8petsc4py_5PETSc_Object; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscViewer_Type; /* "PETSc/Viewer.pyx":74 * # -------------------------------------------------------------------- * * cdef class Viewer(Object): # <<<<<<<<<<<<<< * * Type = ViewerType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Viewer { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Viewer *__pyx_vtabptr_8petsc4py_5PETSc_Viewer; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscRandom_Type; /* "PETSc/Random.pyx":11 * # -------------------------------------------------------------------- * * cdef class Random(Object): # <<<<<<<<<<<<<< * * Type = RandomType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Random { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Random *__pyx_vtabptr_8petsc4py_5PETSc_Random; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscIS_Type; /* "PETSc/IS.pyx":10 * # -------------------------------------------------------------------- * * cdef class IS(Object): # <<<<<<<<<<<<<< * * Type = ISType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_IS { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_IS *__pyx_vtabptr_8petsc4py_5PETSc_IS; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscLGMap_Type; /* "PETSc/IS.pyx":350 * # -------------------------------------------------------------------- * * cdef class LGMap(Object): # <<<<<<<<<<<<<< * * MapType = GLMapType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_LGMap { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_LGMap *__pyx_vtabptr_8petsc4py_5PETSc_LGMap; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscSF_Type; /* "PETSc/SF.pyx":9 * # -------------------------------------------------------------------- * * cdef class SF(Object): # <<<<<<<<<<<<<< * * Type = SFType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_SF { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_SF *__pyx_vtabptr_8petsc4py_5PETSc_SF; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscVec_Type; /* "PETSc/Vec.pyx":25 * # -------------------------------------------------------------------- * * cdef class Vec(Object): # <<<<<<<<<<<<<< * * Type = VecType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Vec { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Vec *__pyx_vtabptr_8petsc4py_5PETSc_Vec; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscScatter_Type; /* "PETSc/Scatter.pyx":3 * # -------------------------------------------------------------------- * * cdef class Scatter(Object): # <<<<<<<<<<<<<< * * Mode = ScatterMode */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Scatter { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Scatter *__pyx_vtabptr_8petsc4py_5PETSc_Scatter; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscSection_Type; /* "PETSc/Section.pyx":3 * # -------------------------------------------------------------------- * * cdef class Section(Object): # <<<<<<<<<<<<<< * * def __cinit__(self): */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Section { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Section *__pyx_vtabptr_8petsc4py_5PETSc_Section; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscMat_Type; /* "PETSc/Mat.pyx":148 * # -------------------------------------------------------------------- * * cdef class Mat(Object): # <<<<<<<<<<<<<< * * Type = MatType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Mat { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Mat *__pyx_vtabptr_8petsc4py_5PETSc_Mat; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscNullSpace_Type; /* "PETSc/Mat.pyx":1461 * # -------------------------------------------------------------------- * * cdef class NullSpace(Object): # <<<<<<<<<<<<<< * * # */ struct __pyx_vtabstruct_8petsc4py_5PETSc_NullSpace { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_NullSpace *__pyx_vtabptr_8petsc4py_5PETSc_NullSpace; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscPC_Type; /* "PETSc/PC.pyx":104 * # -------------------------------------------------------------------- * * cdef class PC(Object): # <<<<<<<<<<<<<< * * Type = PCType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_PC { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_PC *__pyx_vtabptr_8petsc4py_5PETSc_PC; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscKSP_Type; /* "PETSc/KSP.pyx":86 * # -------------------------------------------------------------------- * * cdef class KSP(Object): # <<<<<<<<<<<<<< * * Type = KSPType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_KSP { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_KSP *__pyx_vtabptr_8petsc4py_5PETSc_KSP; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscSNES_Type; /* "PETSc/SNES.pyx":61 * # -------------------------------------------------------------------- * * cdef class SNES(Object): # <<<<<<<<<<<<<< * * Type = SNESType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_SNES { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_SNES *__pyx_vtabptr_8petsc4py_5PETSc_SNES; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscTS_Type; /* "PETSc/TS.pyx":69 * # ----------------------------------------------------------------------------- * * cdef class TS(Object): # <<<<<<<<<<<<<< * * Type = TSType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_TS { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_TS *__pyx_vtabptr_8petsc4py_5PETSc_TS; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscTAO_Type; /* "PETSc/TAO.pyx":53 * # -------------------------------------------------------------------- * * cdef class TAO(Object): # <<<<<<<<<<<<<< * * """ */ struct __pyx_vtabstruct_8petsc4py_5PETSc_TAO { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_TAO *__pyx_vtabptr_8petsc4py_5PETSc_TAO; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscAO_Type; /* "PETSc/AO.pyx":11 * # -------------------------------------------------------------------- * * cdef class AO(Object): # <<<<<<<<<<<<<< * * Type = AOType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_AO { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_AO *__pyx_vtabptr_8petsc4py_5PETSc_AO; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscDM_Type; /* "PETSc/DM.pyx":24 * # -------------------------------------------------------------------- * * cdef class DM(Object): # <<<<<<<<<<<<<< * * Type = DMType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_DM { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_DM *__pyx_vtabptr_8petsc4py_5PETSc_DM; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscPartitioner_Type; /* "PETSc/Partitioner.pyx":10 * # -------------------------------------------------------------------- * * cdef class Partitioner(Object): # <<<<<<<<<<<<<< * * Type = PartitionerType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Partitioner { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Partitioner *__pyx_vtabptr_8petsc4py_5PETSc_Partitioner; /* "PETSc/petscis.pxi":113 * # -------------------------------------------------------------------- * * cdef class _IS_buffer: # <<<<<<<<<<<<<< * * cdef PetscIS iset */ struct __pyx_vtabstruct_8petsc4py_5PETSc__IS_buffer { int (*acquire)(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *); int (*release)(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *); int (*acquirebuffer)(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *, Py_buffer *, int); int (*releasebuffer)(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *, Py_buffer *); PyObject *(*enter)(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *); PyObject *(*exit)(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *); Py_ssize_t (*getbuffer)(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *, void **); }; static struct __pyx_vtabstruct_8petsc4py_5PETSc__IS_buffer *__pyx_vtabptr_8petsc4py_5PETSc__IS_buffer; /* "PETSc/petscvec.pxi":413 * return 0 * * cdef class _Vec_buffer: # <<<<<<<<<<<<<< * * cdef PetscVec vec */ struct __pyx_vtabstruct_8petsc4py_5PETSc__Vec_buffer { int (*acquire)(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *); int (*release)(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *); int (*acquirebuffer)(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *, Py_buffer *, int); int (*releasebuffer)(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *, Py_buffer *); PyObject *(*enter)(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *); PyObject *(*exit)(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *); Py_ssize_t (*getbuffer)(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *, void **); }; static struct __pyx_vtabstruct_8petsc4py_5PETSc__Vec_buffer *__pyx_vtabptr_8petsc4py_5PETSc__Vec_buffer; /* "PETSc/petscdmda.pxi":198 * # -------------------------------------------------------------------- * * cdef class _DMDA_Vec_array(object): # <<<<<<<<<<<<<< * * cdef _Vec_buffer vecbuf */ struct __pyx_vtabstruct_8petsc4py_5PETSc__DMDA_Vec_array { int (*acquire)(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *); int (*release)(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *); }; static struct __pyx_vtabstruct_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_vtabptr_8petsc4py_5PETSc__DMDA_Vec_array; /* "PETSc/Viewer.pyx":322 * # -------------------------------------------------------------------- * * cdef class ViewerHDF5(Viewer): # <<<<<<<<<<<<<< * * def create(self, name, mode=None, comm=None): */ struct __pyx_vtabstruct_8petsc4py_5PETSc_ViewerHDF5 { struct __pyx_vtabstruct_8petsc4py_5PETSc_Viewer __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_ViewerHDF5 *__pyx_vtabptr_8petsc4py_5PETSc_ViewerHDF5; /* "PETSc/DMDA.pyx":17 * # -------------------------------------------------------------------- * * cdef class DMDA(DM): # <<<<<<<<<<<<<< * * StencilType = DMDAStencilType */ struct __pyx_vtabstruct_8petsc4py_5PETSc_DMDA { struct __pyx_vtabstruct_8petsc4py_5PETSc_DM __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_DMDA *__pyx_vtabptr_8petsc4py_5PETSc_DMDA; /* "PETSc/DMPlex.pyx":3 * # -------------------------------------------------------------------- * * cdef class DMPlex(DM): # <<<<<<<<<<<<<< * * def create(self, comm=None): */ struct __pyx_vtabstruct_8petsc4py_5PETSc_DMPlex { struct __pyx_vtabstruct_8petsc4py_5PETSc_DM __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_DMPlex *__pyx_vtabptr_8petsc4py_5PETSc_DMPlex; /* "PETSc/DMComposite.pyx":3 * # -------------------------------------------------------------------- * * cdef class DMComposite(DM): # <<<<<<<<<<<<<< * * def create(self, comm=None): */ struct __pyx_vtabstruct_8petsc4py_5PETSc_DMComposite { struct __pyx_vtabstruct_8petsc4py_5PETSc_DM __pyx_base; 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} /* PyObjectCall.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw); #else #define __Pyx_PyObject_Call(func, arg, kw) PyObject_Call(func, arg, kw) #endif /* PyObjectCallMethO.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg); #endif /* PyObjectCallOneArg.proto */ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg); /* PyObjectCallNoArg.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallNoArg(PyObject *func); #else #define __Pyx_PyObject_CallNoArg(func) __Pyx_PyObject_Call(func, __pyx_empty_tuple, NULL) #endif /* ForceInitThreads.proto */ #ifndef __PYX_FORCE_INIT_THREADS #define __PYX_FORCE_INIT_THREADS 0 #endif /* PyThreadStateGet.proto */ #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_PyThreadState_declare PyThreadState *__pyx_tstate; #define __Pyx_PyThreadState_assign __pyx_tstate = PyThreadState_GET(); #else #define __Pyx_PyThreadState_declare #define __Pyx_PyThreadState_assign #endif /* PyErrFetchRestore.proto */ #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_ErrRestoreWithState(type, value, tb) __Pyx_ErrRestoreInState(PyThreadState_GET(), type, value, tb) #define __Pyx_ErrFetchWithState(type, value, tb) __Pyx_ErrFetchInState(PyThreadState_GET(), type, value, tb) #define __Pyx_ErrRestore(type, value, tb) __Pyx_ErrRestoreInState(__pyx_tstate, type, value, tb) #define __Pyx_ErrFetch(type, value, tb) __Pyx_ErrFetchInState(__pyx_tstate, type, value, tb) static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); #else #define __Pyx_ErrRestoreWithState(type, value, tb) PyErr_Restore(type, value, tb) #define __Pyx_ErrFetchWithState(type, value, tb) PyErr_Fetch(type, value, tb) #define __Pyx_ErrRestore(type, value, tb) PyErr_Restore(type, value, tb) #define __Pyx_ErrFetch(type, value, tb) PyErr_Fetch(type, value, tb) #endif /* WriteUnraisableException.proto */ static void __Pyx_WriteUnraisable(const char *name, int clineno, int lineno, const char *filename, int full_traceback, int nogil); /* IncludeStringH.proto */ #include /* BytesEquals.proto */ static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals); /* UnicodeEquals.proto */ static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals); /* StrEquals.proto */ #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyString_Equals __Pyx_PyUnicode_Equals #else #define __Pyx_PyString_Equals __Pyx_PyBytes_Equals #endif /* RaiseException.proto */ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause); /* ListAppend.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE int __Pyx_PyList_Append(PyObject* list, PyObject* x) { PyListObject* L = (PyListObject*) list; Py_ssize_t len = Py_SIZE(list); if (likely(L->allocated > len) & likely(len > (L->allocated >> 1))) { Py_INCREF(x); PyList_SET_ITEM(list, len, x); Py_SIZE(list) = len+1; return 0; } return PyList_Append(list, x); } #else #define __Pyx_PyList_Append(L,x) PyList_Append(L,x) #endif /* GetException.proto */ #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_GetException(type, value, tb) __Pyx__GetException(__pyx_tstate, type, value, tb) static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); #else static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); #endif /* SwapException.proto */ #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_ExceptionSwap(type, value, tb) __Pyx__ExceptionSwap(__pyx_tstate, type, value, tb) static CYTHON_INLINE void __Pyx__ExceptionSwap(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); #else static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb); #endif /* SaveResetException.proto */ #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_ExceptionSave(type, value, tb) __Pyx__ExceptionSave(__pyx_tstate, type, value, tb) static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); #define __Pyx_ExceptionReset(type, value, tb) __Pyx__ExceptionReset(__pyx_tstate, type, value, tb) static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); #else #define __Pyx_ExceptionSave(type, value, tb) PyErr_GetExcInfo(type, value, tb) #define __Pyx_ExceptionReset(type, value, tb) PyErr_SetExcInfo(type, value, tb) #endif /* PyObjectCallMethod1.proto */ static PyObject* __Pyx_PyObject_CallMethod1(PyObject* obj, PyObject* method_name, PyObject* arg); /* pop_index.proto */ static PyObject* __Pyx__PyObject_PopNewIndex(PyObject* L, PyObject* py_ix); static PyObject* __Pyx__PyObject_PopIndex(PyObject* L, PyObject* py_ix); #if CYTHON_COMPILING_IN_CPYTHON static PyObject* __Pyx__PyList_PopIndex(PyObject* L, PyObject* py_ix, Py_ssize_t ix); #define __Pyx_PyObject_PopIndex(L, py_ix, ix, is_signed, type, to_py_func) (\ (likely(PyList_CheckExact(L) && __Pyx_fits_Py_ssize_t(ix, type, is_signed))) ?\ __Pyx__PyList_PopIndex(L, py_ix, ix) : (\ (unlikely(py_ix == Py_None)) ? __Pyx__PyObject_PopNewIndex(L, to_py_func(ix)) :\ __Pyx__PyObject_PopIndex(L, py_ix))) #define __Pyx_PyList_PopIndex(L, py_ix, ix, is_signed, type, to_py_func) (\ __Pyx_fits_Py_ssize_t(ix, type, is_signed) ?\ __Pyx__PyList_PopIndex(L, py_ix, ix) : (\ (unlikely(py_ix == Py_None)) ? __Pyx__PyObject_PopNewIndex(L, to_py_func(ix)) :\ __Pyx__PyObject_PopIndex(L, py_ix))) #else #define __Pyx_PyList_PopIndex(L, py_ix, ix, is_signed, type, to_py_func)\ __Pyx_PyObject_PopIndex(L, py_ix, ix, is_signed, type, to_py_func) #define __Pyx_PyObject_PopIndex(L, py_ix, ix, is_signed, type, to_py_func) (\ (unlikely(py_ix == Py_None)) ? __Pyx__PyObject_PopNewIndex(L, to_py_func(ix)) :\ __Pyx__PyObject_PopIndex(L, py_ix)) #endif /* SliceObject.proto */ static CYTHON_INLINE PyObject* __Pyx_PyObject_GetSlice( PyObject* obj, Py_ssize_t cstart, Py_ssize_t cstop, PyObject** py_start, PyObject** py_stop, PyObject** py_slice, int has_cstart, int has_cstop, int wraparound); /* GetItemInt.proto */ #define __Pyx_GetItemInt(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) :\ (is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) :\ __Pyx_GetItemInt_Generic(o, to_py_func(i)))) #define __Pyx_GetItemInt_List(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ __Pyx_GetItemInt_List_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) :\ (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL)) static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, int wraparound, int boundscheck); #define __Pyx_GetItemInt_Tuple(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ __Pyx_GetItemInt_Tuple_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) :\ (PyErr_SetString(PyExc_IndexError, "tuple index out of range"), (PyObject*)NULL)) static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, int wraparound, int boundscheck); static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j); static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, int is_list, int wraparound, int boundscheck); /* Import.proto */ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); /* ImportFrom.proto */ static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name); /* ExtTypeTest.proto */ static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type); /* RaiseTooManyValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected); /* RaiseNeedMoreValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index); /* IterFinish.proto */ static CYTHON_INLINE int __Pyx_IterFinish(void); /* UnpackItemEndCheck.proto */ static int __Pyx_IternextUnpackEndCheck(PyObject *retval, Py_ssize_t expected); /* PyErrExceptionMatches.proto */ #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_PyErr_ExceptionMatches(err) __Pyx_PyErr_ExceptionMatchesInState(__pyx_tstate, err) static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err); #else #define __Pyx_PyErr_ExceptionMatches(err) PyErr_ExceptionMatches(err) #endif /* RaiseDoubleKeywords.proto */ static void __Pyx_RaiseDoubleKeywordsError(const char* func_name, PyObject* kw_name); /* ParseKeywords.proto */ static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject **argnames[],\ PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args,\ const char* function_name); /* RaiseArgTupleInvalid.proto */ static void __Pyx_RaiseArgtupleInvalid(const char* func_name, int exact, Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found); /* ArgTypeTest.proto */ static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, const char *name, int exact); /* KeywordStringCheck.proto */ static CYTHON_INLINE int __Pyx_CheckKeywordStrings(PyObject *kwdict, const char* function_name, int kw_allowed); /* PyObjectSetAttrStr.proto */ #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_PyObject_DelAttrStr(o,n) __Pyx_PyObject_SetAttrStr(o,n,NULL) static CYTHON_INLINE int __Pyx_PyObject_SetAttrStr(PyObject* obj, PyObject* attr_name, PyObject* value) { PyTypeObject* tp = Py_TYPE(obj); if (likely(tp->tp_setattro)) return tp->tp_setattro(obj, attr_name, value); #if PY_MAJOR_VERSION < 3 if (likely(tp->tp_setattr)) return tp->tp_setattr(obj, PyString_AS_STRING(attr_name), value); #endif return PyObject_SetAttr(obj, attr_name, value); } #else #define __Pyx_PyObject_DelAttrStr(o,n) PyObject_DelAttr(o,n) #define __Pyx_PyObject_SetAttrStr(o,n,v) PyObject_SetAttr(o,n,v) #endif /* py_dict_keys.proto */ static CYTHON_INLINE PyObject* __Pyx_PyDict_Keys(PyObject* d); /* UnpackUnboundCMethod.proto */ typedef struct { PyObject *type; PyObject **method_name; PyCFunction func; PyObject *method; int flag; } __Pyx_CachedCFunction; /* CallUnboundCMethod0.proto */ static PyObject* __Pyx__CallUnboundCMethod0(__Pyx_CachedCFunction* cfunc, PyObject* self); #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_CallUnboundCMethod0(cfunc, self)\ ((likely((cfunc)->func)) ?\ (likely((cfunc)->flag == METH_NOARGS) ? 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PyNumber_InPlaceAdd(op1, op2) : PyNumber_Add(op1, op2)) #endif /* ListCompAppend.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE int __Pyx_ListComp_Append(PyObject* list, PyObject* x) { PyListObject* L = (PyListObject*) list; Py_ssize_t len = Py_SIZE(list); if (likely(L->allocated > len)) { Py_INCREF(x); PyList_SET_ITEM(list, len, x); Py_SIZE(list) = len+1; return 0; } return PyList_Append(list, x); } #else #define __Pyx_ListComp_Append(L,x) PyList_Append(L,x) #endif /* StringJoin.proto */ #if PY_MAJOR_VERSION < 3 #define __Pyx_PyString_Join __Pyx_PyBytes_Join #define __Pyx_PyBaseString_Join(s, v) (PyUnicode_CheckExact(s) ? PyUnicode_Join(s, v) : __Pyx_PyBytes_Join(s, v)) #else #define __Pyx_PyString_Join PyUnicode_Join #define __Pyx_PyBaseString_Join PyUnicode_Join #endif #if CYTHON_COMPILING_IN_CPYTHON #if PY_MAJOR_VERSION < 3 #define __Pyx_PyBytes_Join _PyString_Join #else #define __Pyx_PyBytes_Join _PyBytes_Join #endif #else static CYTHON_INLINE PyObject* __Pyx_PyBytes_Join(PyObject* sep, PyObject* values); #endif /* append.proto */ static CYTHON_INLINE int __Pyx_PyObject_Append(PyObject* L, PyObject* x); /* dict_getitem_default.proto */ static PyObject* __Pyx_PyDict_GetItemDefault(PyObject* d, PyObject* key, PyObject* default_value); /* PyObjectCallMethod0.proto */ static PyObject* __Pyx_PyObject_CallMethod0(PyObject* obj, PyObject* method_name); /* pop.proto */ static CYTHON_INLINE PyObject* __Pyx__PyObject_Pop(PyObject* L); #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyList_Pop(PyObject* L); #define __Pyx_PyObject_Pop(L) (likely(PyList_CheckExact(L)) ?\ __Pyx_PyList_Pop(L) : __Pyx__PyObject_Pop(L)) #else #define __Pyx_PyList_Pop(L) __Pyx__PyObject_Pop(L) #define __Pyx_PyObject_Pop(L) __Pyx__PyObject_Pop(L) #endif /* PyDictContains.proto */ static CYTHON_INLINE int __Pyx_PyDict_ContainsTF(PyObject* item, PyObject* dict, int eq) { int result = PyDict_Contains(dict, item); return unlikely(result < 0) ? result : (result == (eq == Py_EQ)); } /* DictGetItem.proto */ #if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { PyObject *value; value = PyDict_GetItemWithError(d, key); if (unlikely(!value)) { if (!PyErr_Occurred()) { PyObject* args = PyTuple_Pack(1, key); if (likely(args)) PyErr_SetObject(PyExc_KeyError, args); Py_XDECREF(args); } return NULL; } Py_INCREF(value); return value; } #else #define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) #endif /* PyObjectLookupSpecial.proto */ #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x02070000 static CYTHON_INLINE PyObject* __Pyx_PyObject_LookupSpecial(PyObject* obj, PyObject* attr_name) { PyObject *res; PyTypeObject *tp = Py_TYPE(obj); #if PY_MAJOR_VERSION < 3 if (unlikely(PyInstance_Check(obj))) return __Pyx_PyObject_GetAttrStr(obj, attr_name); #endif res = _PyType_Lookup(tp, attr_name); if (likely(res)) { descrgetfunc f = Py_TYPE(res)->tp_descr_get; if (!f) { Py_INCREF(res); } else { res = f(res, obj, (PyObject *)tp); } } else { PyErr_SetObject(PyExc_AttributeError, attr_name); } return res; } #else #define __Pyx_PyObject_LookupSpecial(o,n) __Pyx_PyObject_GetAttrStr(o,n) #endif /* SliceObject.proto */ #define __Pyx_PyObject_DelSlice(obj, cstart, cstop, py_start, py_stop, py_slice, has_cstart, has_cstop, wraparound)\ __Pyx_PyObject_SetSlice(obj, (PyObject*)NULL, cstart, cstop, py_start, py_stop, py_slice, has_cstart, has_cstop, wraparound) static CYTHON_INLINE int __Pyx_PyObject_SetSlice( PyObject* obj, PyObject* value, Py_ssize_t cstart, Py_ssize_t cstop, PyObject** py_start, PyObject** py_stop, PyObject** py_slice, int has_cstart, int has_cstop, int wraparound); /* SliceTupleAndList.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyList_GetSlice(PyObject* src, Py_ssize_t start, Py_ssize_t stop); static CYTHON_INLINE PyObject* __Pyx_PyTuple_GetSlice(PyObject* src, Py_ssize_t start, Py_ssize_t stop); #else #define __Pyx_PyList_GetSlice(seq, start, stop) PySequence_GetSlice(seq, start, stop) #define __Pyx_PyTuple_GetSlice(seq, start, stop) PySequence_GetSlice(seq, start, stop) #endif /* GetModuleGlobalName.proto */ static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name); /* py_dict_clear.proto */ #define __Pyx_PyDict_Clear(d) (PyDict_Clear(d), 0) /* SetVTable.proto */ static int __Pyx_SetVtable(PyObject *dict, void *vtable); /* CalculateMetaclass.proto */ static PyObject *__Pyx_CalculateMetaclass(PyTypeObject *metaclass, PyObject *bases); /* Py3ClassCreate.proto */ static PyObject *__Pyx_Py3MetaclassPrepare(PyObject *metaclass, PyObject *bases, PyObject *name, PyObject *qualname, PyObject *mkw, PyObject *modname, PyObject *doc); static PyObject *__Pyx_Py3ClassCreate(PyObject *metaclass, PyObject *name, PyObject *bases, PyObject *dict, PyObject *mkw, int calculate_metaclass, int allow_py2_metaclass); /* FetchCommonType.proto */ static PyTypeObject* __Pyx_FetchCommonType(PyTypeObject* type); /* CythonFunction.proto */ #define __Pyx_CyFunction_USED 1 #include #define __Pyx_CYFUNCTION_STATICMETHOD 0x01 #define __Pyx_CYFUNCTION_CLASSMETHOD 0x02 #define __Pyx_CYFUNCTION_CCLASS 0x04 #define __Pyx_CyFunction_GetClosure(f)\ (((__pyx_CyFunctionObject *) (f))->func_closure) #define __Pyx_CyFunction_GetClassObj(f)\ (((__pyx_CyFunctionObject *) (f))->func_classobj) #define __Pyx_CyFunction_Defaults(type, f)\ ((type *)(((__pyx_CyFunctionObject *) (f))->defaults)) #define __Pyx_CyFunction_SetDefaultsGetter(f, g)\ ((__pyx_CyFunctionObject *) (f))->defaults_getter = (g) typedef struct { PyCFunctionObject func; #if PY_VERSION_HEX < 0x030500A0 PyObject *func_weakreflist; #endif PyObject *func_dict; PyObject *func_name; PyObject *func_qualname; PyObject *func_doc; PyObject *func_globals; PyObject *func_code; PyObject *func_closure; PyObject *func_classobj; void *defaults; int defaults_pyobjects; int flags; PyObject *defaults_tuple; PyObject *defaults_kwdict; PyObject *(*defaults_getter)(PyObject *); PyObject *func_annotations; } __pyx_CyFunctionObject; static PyTypeObject *__pyx_CyFunctionType = 0; #define __Pyx_CyFunction_NewEx(ml, flags, qualname, self, module, globals, code)\ __Pyx_CyFunction_New(__pyx_CyFunctionType, ml, flags, qualname, self, module, globals, code) static PyObject *__Pyx_CyFunction_New(PyTypeObject *, PyMethodDef *ml, int flags, PyObject* qualname, PyObject *self, PyObject *module, PyObject *globals, PyObject* code); static CYTHON_INLINE void *__Pyx_CyFunction_InitDefaults(PyObject *m, size_t size, int pyobjects); static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsTuple(PyObject *m, PyObject *tuple); static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsKwDict(PyObject *m, PyObject *dict); static CYTHON_INLINE void __Pyx_CyFunction_SetAnnotationsDict(PyObject *m, PyObject *dict); static int __pyx_CyFunction_init(void); /* GetNameInClass.proto */ static PyObject *__Pyx_GetNameInClass(PyObject *nmspace, PyObject *name); /* PyIdentifierFromString.proto */ #if !defined(__Pyx_PyIdentifier_FromString) #if PY_MAJOR_VERSION < 3 #define __Pyx_PyIdentifier_FromString(s) PyString_FromString(s) #else #define __Pyx_PyIdentifier_FromString(s) PyUnicode_FromString(s) #endif #endif /* ModuleImport.proto */ static PyObject *__Pyx_ImportModule(const char *name); /* RegisterModuleCleanup.proto */ static void __pyx_module_cleanup(PyObject *self); static int __Pyx_RegisterCleanup(void); /* CodeObjectCache.proto */ typedef struct { PyCodeObject* code_object; int code_line; } __Pyx_CodeObjectCacheEntry; struct __Pyx_CodeObjectCache { int count; int max_count; __Pyx_CodeObjectCacheEntry* entries; }; static struct __Pyx_CodeObjectCache __pyx_code_cache = {0,0,NULL}; static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line); static PyCodeObject *__pyx_find_code_object(int code_line); static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object); /* AddTraceback.proto */ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_InsertMode(InsertMode value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_ScatterMode(ScatterMode value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_NormType(NormType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscViewerFormat(PetscViewerFormat value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscFileMode(PetscFileMode value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_ISGlobalToLocalMappingType(ISGlobalToLocalMappingType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_VecOption(VecOption value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatOption(MatOption value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatAssemblyType(MatAssemblyType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatInfoType(MatInfoType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatStructure(MatStructure value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatFactorShiftType(MatFactorShiftType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatSORType(MatSORType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCSide(PCSide value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCASMType(PCASMType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCGASMType(PCGASMType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCMGType(PCMGType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCCompositeType(PCCompositeType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCFieldSplitSchurPreType(PCFieldSplitSchurPreType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCFieldSplitSchurFactType(PCFieldSplitSchurFactType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_KSPNormType(KSPNormType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_KSPConvergedReason(KSPConvergedReason value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_SNESNormSchedule(SNESNormSchedule value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_SNESConvergedReason(SNESConvergedReason value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_TSProblemType(TSProblemType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_TSEquationType(TSEquationType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_TSExactFinalTimeOption(TSExactFinalTimeOption value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_TSConvergedReason(TSConvergedReason value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_TaoConvergedReason(TaoConvergedReason value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_DMBoundaryType(DMBoundaryType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_DMDAStencilType(DMDAStencilType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_DMDAInterpolationType(DMDAInterpolationType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_DMDAElementType(DMDAElementType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscInt(PetscInt value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscBool(PetscBool value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscLogStage(PetscLogStage value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscClassId(PetscClassId value); static PyObject* __pyx_convert__to_py_PetscEventPerfInfo(PetscEventPerfInfo s); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscLogEvent(PetscLogEvent value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MPI_Fint(MPI_Fint value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_unsigned_long(unsigned long value); static PyObject* __pyx_convert__to_py_MatInfo(MatInfo s); /* ClassMethod.proto */ #include "descrobject.h" static PyObject* __Pyx_Method_ClassMethod(PyObject *method); /* CIntFromPy.proto */ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE PetscInt __Pyx_PyInt_As_PetscInt(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE InsertMode __Pyx_PyInt_As_InsertMode(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE ScatterMode __Pyx_PyInt_As_ScatterMode(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE PetscFileMode __Pyx_PyInt_As_PetscFileMode(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE MatStructure __Pyx_PyInt_As_MatStructure(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE MatAssemblyType __Pyx_PyInt_As_MatAssemblyType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE MatInfoType __Pyx_PyInt_As_MatInfoType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE MatFactorShiftType __Pyx_PyInt_As_MatFactorShiftType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE KSPConvergedReason __Pyx_PyInt_As_KSPConvergedReason(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE SNESConvergedReason __Pyx_PyInt_As_SNESConvergedReason(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE TaoConvergedReason __Pyx_PyInt_As_TaoConvergedReason(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE DMBoundaryType __Pyx_PyInt_As_DMBoundaryType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE DMDAStencilType __Pyx_PyInt_As_DMDAStencilType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE DMDAInterpolationType __Pyx_PyInt_As_DMDAInterpolationType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE DMDAElementType __Pyx_PyInt_As_DMDAElementType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE PetscClassId __Pyx_PyInt_As_PetscClassId(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE PetscViewerFormat __Pyx_PyInt_As_PetscViewerFormat(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE unsigned long __Pyx_PyInt_As_unsigned_long(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE PetscBool __Pyx_PyInt_As_PetscBool(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE ISGlobalToLocalMappingType __Pyx_PyInt_As_ISGlobalToLocalMappingType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE VecOption __Pyx_PyInt_As_VecOption(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE size_t __Pyx_PyInt_As_size_t(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE NormType __Pyx_PyInt_As_NormType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE MatOption __Pyx_PyInt_As_MatOption(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE PCASMType __Pyx_PyInt_As_PCASMType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE PCGASMType __Pyx_PyInt_As_PCGASMType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE PCCompositeType __Pyx_PyInt_As_PCCompositeType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE PCFieldSplitSchurFactType __Pyx_PyInt_As_PCFieldSplitSchurFactType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE PCFieldSplitSchurPreType __Pyx_PyInt_As_PCFieldSplitSchurPreType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE PCMGType __Pyx_PyInt_As_PCMGType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE PCSide __Pyx_PyInt_As_PCSide(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE KSPNormType __Pyx_PyInt_As_KSPNormType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE SNESNormSchedule __Pyx_PyInt_As_SNESNormSchedule(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE TSProblemType __Pyx_PyInt_As_TSProblemType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE TSEquationType __Pyx_PyInt_As_TSEquationType(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE TSExactFinalTimeOption __Pyx_PyInt_As_TSExactFinalTimeOption(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE TSConvergedReason __Pyx_PyInt_As_TSConvergedReason(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *); /* CheckBinaryVersion.proto */ static int __Pyx_check_binary_version(void); /* FunctionExport.proto */ static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig); /* TypeImport.proto */ static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict); /* InitStrings.proto */ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); static int __pyx_f_8petsc4py_5PETSc_10_IS_buffer_acquire(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self); /* proto*/ static int __pyx_f_8petsc4py_5PETSc_10_IS_buffer_release(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self); /* proto*/ static int __pyx_f_8petsc4py_5PETSc_10_IS_buffer_acquirebuffer(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self, Py_buffer *__pyx_v_view, int __pyx_v_flags); /* proto*/ static int __pyx_f_8petsc4py_5PETSc_10_IS_buffer_releasebuffer(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self, Py_buffer *__pyx_v_view); /* proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_10_IS_buffer_enter(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self); /* proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_10_IS_buffer_exit(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self); /* proto*/ static Py_ssize_t __pyx_f_8petsc4py_5PETSc_10_IS_buffer_getbuffer(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self, void **__pyx_v_p); /* proto*/ static int __pyx_f_8petsc4py_5PETSc_11_Vec_buffer_acquire(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self); /* proto*/ static int __pyx_f_8petsc4py_5PETSc_11_Vec_buffer_release(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self); /* proto*/ static int __pyx_f_8petsc4py_5PETSc_11_Vec_buffer_acquirebuffer(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self, Py_buffer *__pyx_v_view, int __pyx_v_flags); /* proto*/ static int __pyx_f_8petsc4py_5PETSc_11_Vec_buffer_releasebuffer(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self, Py_buffer *__pyx_v_view); /* proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_11_Vec_buffer_enter(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self); /* proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_11_Vec_buffer_exit(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self); /* proto*/ static Py_ssize_t __pyx_f_8petsc4py_5PETSc_11_Vec_buffer_getbuffer(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self, void **__pyx_v_p); /* proto*/ static int __pyx_f_8petsc4py_5PETSc_15_DMDA_Vec_array_acquire(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_v_self); /* proto*/ static int __pyx_f_8petsc4py_5PETSc_15_DMDA_Vec_array_release(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_v_self); /* proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_6Object_get_attr(struct PyPetscObjectObject *__pyx_v_self, char *__pyx_v_name); /* proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_6Object_set_attr(struct PyPetscObjectObject *__pyx_v_self, char *__pyx_v_name, PyObject *__pyx_v_attr); /* proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_6Object_get_dict(struct PyPetscObjectObject *__pyx_v_self); /* proto*/ /* Module declarations from 'numpy' */ /* Module declarations from 'petsc4py.PETSc' */ static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Comm = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Object = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Viewer = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Random = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_IS = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_LGMap = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_SF = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Vec = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Scatter = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Section = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Mat = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_NullSpace = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_PC = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_KSP = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_SNES = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_TS = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_TAO = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_AO = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_DM = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Partitioner = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_dtype = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_ndarray = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc__IS_buffer = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc__Vec_buffer = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc__Vec_LocalForm = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc__Mat_Stencil = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc__DMDA_Vec_array = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc__DMComposite_access = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Options = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Sys = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Log = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_LogStage = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_LogClass = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_LogEvent = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_ViewerHDF5 = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_DMDA = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_DMPlex = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_DMComposite = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_DMShell = 0; static PyObject *__pyx_v_8petsc4py_5PETSc_PetscError = 0; static PyObject *__pyx_v_8petsc4py_5PETSc_citations_registry = 0; static PyObject *__pyx_v_8petsc4py_5PETSc_stage_registry = 0; static PyObject *__pyx_v_8petsc4py_5PETSc_class_registry = 0; static PyObject *__pyx_v_8petsc4py_5PETSc_event_registry = 0; static struct PyPetscCommObject *__pyx_v_8petsc4py_5PETSc___COMM_NULL__ = 0; static struct PyPetscCommObject *__pyx_v_8petsc4py_5PETSc___COMM_SELF__ = 0; static struct PyPetscCommObject *__pyx_v_8petsc4py_5PETSc___COMM_WORLD__ = 0; static MPI_Comm __pyx_v_8petsc4py_5PETSc_PETSC_COMM_DEFAULT; static PyObject *__pyx_v_8petsc4py_5PETSc_type_registry = 0; static PyObject *__pyx_v_8petsc4py_5PETSc_tracebacklist = 0; static int __pyx_v_8petsc4py_5PETSc_PyPetsc_Argc; static char **__pyx_v_8petsc4py_5PETSc_PyPetsc_Argv; static int __pyx_v_8petsc4py_5PETSc_registercalled; static char const *__pyx_v_8petsc4py_5PETSc_citation; static int __pyx_f_8petsc4py_5PETSc_PyPetscType_Register(int, PyTypeObject *); /*proto*/ static PyTypeObject *__pyx_f_8petsc4py_5PETSc_PyPetscType_Lookup(int); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_bytes2str(const char *); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_str2bytes(PyObject *, const char **); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_S_(const char *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_SETERR(int); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_CHKERR(int); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_toInt(PetscInt); /*proto*/ static CYTHON_INLINE PetscInt __pyx_f_8petsc4py_5PETSc_asInt(PyObject *); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_toReal(PetscReal); /*proto*/ static CYTHON_INLINE PetscReal __pyx_f_8petsc4py_5PETSc_asReal(PyObject *); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_toScalar(PetscScalar); /*proto*/ static CYTHON_INLINE PetscScalar __pyx_f_8petsc4py_5PETSc_asScalar(PyObject *); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_asarray(PyObject *); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_arange(PyObject *, PyObject *, PyObject *); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_empty_i(PetscInt); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_empty_r(PetscInt); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_empty_s(PetscInt); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_empty_c(PetscInt); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_empty_p(PetscInt); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_array_i(PetscInt, const PetscInt *); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_array_r(PetscInt, const PetscReal *); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_array_s(PetscInt, const PetscScalar *); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_iarray(PyObject *, int); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_iarray_i(PyObject *, PetscInt *, PetscInt **); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_iarray_r(PyObject *, PetscInt *, PetscReal **); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_iarray_s(PyObject *, PetscInt *, PetscScalar **); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_oarray(PyObject *, int); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_oarray_i(PyObject *, PetscInt *, PetscInt **); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_oarray_r(PyObject *, PetscInt *, PetscReal **); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_oarray_s(PyObject *, PetscInt *, PetscScalar **); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_oarray_p(PyObject *, PetscInt *, void **); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_ofarray_s(PyObject *, PetscInt *, PetscScalar **); /*proto*/ static CYTHON_INLINE InsertMode __pyx_f_8petsc4py_5PETSc_insertmode(PyObject *); /*proto*/ static CYTHON_INLINE ScatterMode __pyx_f_8petsc4py_5PETSc_scattermode(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_getprefix(PyObject *, struct __pyx_opt_args_8petsc4py_5PETSc_getprefix *__pyx_optional_args); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_opt2str(const char *, const char *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_getopt_Bool(PetscOptions, const char *, const char *, PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_getopt_Int(PetscOptions, const char *, const char *, PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_getopt_Real(PetscOptions, const char *, const char *, PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_getopt_Scalar(PetscOptions, const char *, const char *, PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_getopt_String(PetscOptions, const char *, const char *, PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_getpair(PyObject *, PyObject *, const char **, const char **); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_getopt(PetscOptions, enum __pyx_t_8petsc4py_5PETSc_PetscOptType, PyObject *, PyObject *, PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_tokenize(PyObject *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_iskey(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_gettok(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_getkey(PyObject *, PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_parseopt(PyObject *, PyObject *); /*proto*/ static CYTHON_INLINE MPI_Comm __pyx_f_8petsc4py_5PETSc_mpi4py_Comm_Get(PyObject *); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_mpi4py_Comm_New(MPI_Comm); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_PetscCommDEALLOC(MPI_Comm *); /*proto*/ static CYTHON_INLINE MPI_Comm __pyx_f_8petsc4py_5PETSc_def_Comm(PyObject *, MPI_Comm); /*proto*/ static CYTHON_INLINE struct PyPetscCommObject *__pyx_f_8petsc4py_5PETSc_new_Comm(MPI_Comm); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_comm_size(MPI_Comm); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_comm_rank(MPI_Comm); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_Sys_Sizes(PyObject *, PyObject *, PetscInt *, PetscInt *, PetscInt *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_Sys_Layout(MPI_Comm, PetscInt, PetscInt *, PetscInt *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_event_args2objs(PyObject *, PetscObject *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_PetscINCREF(PetscObject *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_PetscCLEAR(PetscObject *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_PetscDEALLOC(PetscObject *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_PetscINCSTATE(PetscObject *); /*proto*/ static CYTHON_INLINE void __pyx_f_8petsc4py_5PETSc_Py_DecRef(PyObject *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_PetscDelPyDict(void *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PetscGetPyDict(PetscObject, int); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PetscGetPyObj(PetscObject, char *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PetscSetPyObj(PetscObject, char *, PyObject *); /*proto*/ static CYTHON_INLINE long __pyx_f_8petsc4py_5PETSc_Object_toFortran(PetscObject); /*proto*/ static CYTHON_INLINE PyTypeObject *__pyx_f_8petsc4py_5PETSc_subtype_DM(DM); /*proto*/ static CYTHON_INLINE PyTypeObject *__pyx_f_8petsc4py_5PETSc_subtype_Object(PetscObject); /*proto*/ static CYTHON_INLINE PetscFileMode __pyx_f_8petsc4py_5PETSc_filemode(PyObject *); /*proto*/ static CYTHON_INLINE struct PyPetscISObject *__pyx_f_8petsc4py_5PETSc_ref_IS(IS); /*proto*/ static CYTHON_INLINE struct PyPetscLGMapObject *__pyx_f_8petsc4py_5PETSc_ref_LGMap(ISLocalToGlobalMapping); /*proto*/ static CYTHON_INLINE struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_ref_Vec(Vec); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_pos(struct PyPetscVecObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_neg(struct PyPetscVecObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_abs(struct PyPetscVecObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_iadd(struct PyPetscVecObject *, PyObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_isub(struct PyPetscVecObject *, PyObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_imul(struct PyPetscVecObject *, PyObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_idiv(struct PyPetscVecObject *, PyObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_add(struct PyPetscVecObject *, PyObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_sub(struct PyPetscVecObject *, PyObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_mul(struct PyPetscVecObject *, PyObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_div(struct PyPetscVecObject *, PyObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_radd(struct PyPetscVecObject *, PyObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_rsub(struct PyPetscVecObject *, PyObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_rmul(struct PyPetscVecObject *, PyObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_vec_rdiv(struct PyPetscVecObject *, PyObject *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_Vec_Sizes(PyObject *, PyObject *, PetscInt *, PetscInt *, PetscInt *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_vecsetvalues(Vec, PyObject *, PyObject *, PyObject *, int, int); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_vecgetvalues(Vec, PyObject *, PyObject *); /*proto*/ static CYTHON_INLINE struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_f_8petsc4py_5PETSc_vec_getbuffer_r(struct PyPetscVecObject *); /*proto*/ static CYTHON_INLINE struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_f_8petsc4py_5PETSc_vec_getbuffer_w(struct PyPetscVecObject *); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_vec_getarray_r(struct PyPetscVecObject *); /*proto*/ static CYTHON_INLINE PyArrayObject *__pyx_f_8petsc4py_5PETSc_vec_getarray_w(struct PyPetscVecObject *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_vec_setarray(struct PyPetscVecObject *, PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_vec_getitem(struct PyPetscVecObject *, PyObject *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_vec_setitem(struct PyPetscVecObject *, PyObject *, PyObject *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_Vec_AcquireArray(Vec, PetscScalar **, int); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_Vec_ReleaseArray(Vec, PetscScalar **, int); /*proto*/ static CYTHON_INLINE struct PyPetscNullSpaceObject *__pyx_f_8petsc4py_5PETSc_ref_NullSpace(MatNullSpace); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_NullSpace_Function(MatNullSpace, Vec, void *); /*proto*/ static CYTHON_INLINE struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_ref_Mat(Mat); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_pos(struct PyPetscMatObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_neg(struct PyPetscMatObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_iadd(struct PyPetscMatObject *, PyObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_isub(struct PyPetscMatObject *, PyObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_imul(struct PyPetscMatObject *, PyObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_idiv(struct PyPetscMatObject *, PyObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_add(struct PyPetscMatObject *, PyObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_sub(struct PyPetscMatObject *, PyObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_mul(struct PyPetscMatObject *, PyObject *); /*proto*/ static struct PyPetscVecObject *__pyx_f_8petsc4py_5PETSc_mat_mul_vec(struct PyPetscMatObject *, struct PyPetscVecObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_div(struct PyPetscMatObject *, PyObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_radd(struct PyPetscMatObject *, PyObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_rsub(struct PyPetscMatObject *, PyObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_rmul(struct PyPetscMatObject *, PyObject *); /*proto*/ static struct PyPetscMatObject *__pyx_f_8petsc4py_5PETSc_mat_rdiv(struct PyPetscMatObject *, PyObject *); /*proto*/ static CYTHON_INLINE MatStructure __pyx_f_8petsc4py_5PETSc_matstructure(PyObject *); /*proto*/ static CYTHON_INLINE MatAssemblyType __pyx_f_8petsc4py_5PETSc_assemblytype(PyObject *); /*proto*/ static CYTHON_INLINE MatInfoType __pyx_f_8petsc4py_5PETSc_infotype(PyObject *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_Mat_Sizes(PyObject *, PyObject *, PetscInt *, PetscInt *, PetscInt *, PetscInt *, PetscInt *, PetscInt *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_Mat_Create(const char*, PyObject *, PyObject *, PyObject *, Mat *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_Mat_AllocAIJ_NNZ(Mat, PyObject *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_Mat_AllocAIJ_CSR(Mat, PyObject *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_Mat_AllocAIJ(Mat, PyObject *, PyObject *); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_Mat_AllocDense(Mat, PyObject *); /*proto*/ static CYTHON_INLINE __pyx_t_8petsc4py_5PETSc_MatSetValuesFcn *__pyx_f_8petsc4py_5PETSc_matsetvalues_fcn(int, int); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_matsetvalues(Mat, PyObject *, PyObject *, PyObject *, PyObject *, int, int); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_matsetvalues_rcv(Mat, PyObject *, PyObject *, PyObject *, PyObject *, int, int); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_matsetvalues_ijv(Mat, PyObject *, PyObject *, PyObject *, PyObject *, PyObject *, int, int); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_matsetvalues_csr(Mat, PyObject *, PyObject *, PyObject *, PyObject *, int, int); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_matgetvalues(Mat, PyObject *, PyObject *, PyObject *); /*proto*/ static CYTHON_INLINE MatFactorShiftType __pyx_f_8petsc4py_5PETSc_matfactorshifttype(PyObject *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_matfactorinfo(PetscBool, PetscBool, PyObject *, MatFactorInfo *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_mat_getitem(struct PyPetscMatObject *, PyObject *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_mat_setitem(struct PyPetscMatObject *, PyObject *, PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_matsetvaluestencil(Mat, struct __pyx_obj_8petsc4py_5PETSc__Mat_Stencil *, struct __pyx_obj_8petsc4py_5PETSc__Mat_Stencil *, PyObject *, InsertMode, int); /*proto*/ static CYTHON_INLINE struct PyPetscKSPObject *__pyx_f_8petsc4py_5PETSc_ref_KSP(KSP); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_KSP_Converged(KSP, PetscInt, PetscReal, KSPConvergedReason *, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_KSP_Monitor(KSP, PetscInt, PetscReal, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_KSP_ComputeRHS(KSP, Vec, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_KSP_ComputeOps(KSP, Mat, Mat, void *); /*proto*/ static CYTHON_INLINE struct PyPetscSNESObject *__pyx_f_8petsc4py_5PETSc_ref_SNES(SNES); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_SNES_InitialGuess(SNES, Vec, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_SNES_Function(SNES, Vec, Vec, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_SNES_Update(SNES, PetscInt); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_SNES_Jacobian(SNES, Vec, Mat, Mat, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_SNES_Objective(SNES, Vec, PetscReal *, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_SNES_Converged(SNES, PetscInt, PetscReal, PetscReal, PetscReal, SNESConvergedReason *, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_SNES_Monitor(SNES, PetscInt, PetscReal, void *); /*proto*/ static CYTHON_INLINE struct PyPetscTSObject *__pyx_f_8petsc4py_5PETSc_ref_TS(TS); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TS_RHSFunction(TS, PetscReal, Vec, Vec, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TS_RHSJacobian(TS, PetscReal, Vec, Mat, Mat, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TS_IFunction(TS, PetscReal, Vec, Vec, Vec, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TS_IJacobian(TS, PetscReal, Vec, Vec, PetscReal, Mat, Mat, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TS_Monitor(TS, PetscInt, PetscReal, Vec, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TS_PreStep(TS); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TS_PostStep(TS); /*proto*/ static CYTHON_INLINE struct PyPetscTAOObject *__pyx_f_8petsc4py_5PETSc_ref_TAO(Tao); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TAO_Objective(Tao, Vec, PetscReal *, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TAO_SeparableObjective(Tao, Vec, Vec, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TAO_Gradient(Tao, Vec, Vec, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TAO_ObjGrad(Tao, Vec, PetscReal *, Vec, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TAO_Constraints(Tao, Vec, Vec, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TAO_VarBounds(Tao, Vec, Vec, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TAO_Hessian(Tao, Vec, Mat, Mat, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TAO_Jacobian(Tao, Vec, Mat, Mat, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TAO_JacobianState(Tao, Vec, Mat, Mat, Mat, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TAO_JacobianDesign(Tao, Vec, Mat, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TAO_Converged(Tao, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_TAO_Monitor(Tao, void *); /*proto*/ static CYTHON_INLINE DMBoundaryType __pyx_f_8petsc4py_5PETSc_asBoundaryType(PyObject *); /*proto*/ static CYTHON_INLINE PetscInt __pyx_f_8petsc4py_5PETSc_asBoundary(PyObject *, DMBoundaryType *, DMBoundaryType *, DMBoundaryType *); /*proto*/ static CYTHON_INLINE DMDAStencilType __pyx_f_8petsc4py_5PETSc_asStencil(PyObject *); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_toStencil(DMDAStencilType); /*proto*/ static CYTHON_INLINE DMDAInterpolationType __pyx_f_8petsc4py_5PETSc_dainterpolationtype(PyObject *); /*proto*/ static CYTHON_INLINE DMDAElementType __pyx_f_8petsc4py_5PETSc_daelementtype(PyObject *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_DMDAGetDim(DM, PetscInt *); /*proto*/ static CYTHON_INLINE PetscInt __pyx_f_8petsc4py_5PETSc_asDims(PyObject *, PetscInt *, PetscInt *, PetscInt *); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_toDims(PetscInt, PetscInt, PetscInt, PetscInt); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_asOwnershipRanges(PyObject *, PetscInt, PetscInt *, PetscInt *, PetscInt *, PetscInt **, PetscInt **, PetscInt **); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_8petsc4py_5PETSc_toOwnershipRanges(PetscInt, PetscInt, PetscInt, PetscInt, const PetscInt *, const PetscInt *, const PetscInt *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_adjust_index_exp(PyObject *, PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_adjust_index(PyObject *, PyObject *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_CreateGlobalVector(DM, Vec *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_CreateLocalVector(DM, Vec *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_GlobalToLocalBegin(DM, Vec, InsertMode, Vec); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_GlobalToLocalEnd(DM, Vec, InsertMode, Vec); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_LocalToGlobalBegin(DM, Vec, InsertMode, Vec); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_LocalToGlobalEnd(DM, Vec, InsertMode, Vec); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_LocalToLocalBegin(DM, Vec, InsertMode, Vec); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_LocalToLocalEnd(DM, Vec, InsertMode, Vec); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_CreateMatrix(DM, Mat *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_Coarsen(DM, MPI_Comm, DM *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_Refine(DM, MPI_Comm, DM *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_CreateInterpolation(DM, DM, Mat *, Vec *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_CreateInjection(DM, DM, Mat *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_CreateFieldDecomposition(DM, PetscInt *, char ***, IS **, DM **); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_DMSHELL_CreateSubDM(DM, PetscInt, PetscInt *, IS *, DM *); /*proto*/ static PetscBool __pyx_f_8petsc4py_5PETSc_get_citation(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_set_citation(PyObject *, int); /*proto*/ static struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_f_8petsc4py_5PETSc_get_LogStage(PyObject *); /*proto*/ static struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_f_8petsc4py_5PETSc_reg_LogStage(PyObject *, PetscLogStage); /*proto*/ static struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_f_8petsc4py_5PETSc_get_LogClass(PyObject *); /*proto*/ static struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_f_8petsc4py_5PETSc_reg_LogClass(PyObject *, PetscClassId); /*proto*/ static struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_f_8petsc4py_5PETSc_get_LogEvent(PyObject *); /*proto*/ static struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_f_8petsc4py_5PETSc_reg_LogEvent(PyObject *, PetscLogEvent); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_tp_traverse(PyObject *, visitproc, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_tp_clear(PyObject *); /*proto*/ static CYTHON_INLINE void __pyx_f_8petsc4py_5PETSc_TypeEnableGC(PyTypeObject *); /*proto*/ static CYTHON_INLINE int __pyx_f_8petsc4py_5PETSc_setref(void *, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_PyPetscError_Set(int); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscComm_New(MPI_Comm); /*proto*/ static MPI_Comm __pyx_f_8petsc4py_5PETSc_PyPetscComm_Get(PyObject *); /*proto*/ static MPI_Comm *__pyx_f_8petsc4py_5PETSc_PyPetscComm_GetPtr(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscObject_New(PetscObject); /*proto*/ static PetscObject __pyx_f_8petsc4py_5PETSc_PyPetscObject_Get(PyObject *); /*proto*/ static PetscObject *__pyx_f_8petsc4py_5PETSc_PyPetscObject_GetPtr(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscViewer_New(PetscViewer); /*proto*/ static PetscViewer __pyx_f_8petsc4py_5PETSc_PyPetscViewer_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscRandom_New(PetscRandom); /*proto*/ static PetscRandom __pyx_f_8petsc4py_5PETSc_PyPetscRandom_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscIS_New(IS); /*proto*/ static IS __pyx_f_8petsc4py_5PETSc_PyPetscIS_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscLGMap_New(ISLocalToGlobalMapping); /*proto*/ static ISLocalToGlobalMapping __pyx_f_8petsc4py_5PETSc_PyPetscLGMap_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscSF_New(PetscSF); /*proto*/ static PetscSF __pyx_f_8petsc4py_5PETSc_PyPetscSF_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscVec_New(Vec); /*proto*/ static Vec __pyx_f_8petsc4py_5PETSc_PyPetscVec_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscScatter_New(VecScatter); /*proto*/ static VecScatter __pyx_f_8petsc4py_5PETSc_PyPetscScatter_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscSection_New(PetscSection); /*proto*/ static PetscSection __pyx_f_8petsc4py_5PETSc_PyPetscSection_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscMat_New(Mat); /*proto*/ static Mat __pyx_f_8petsc4py_5PETSc_PyPetscMat_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscPC_New(PC); /*proto*/ static PC __pyx_f_8petsc4py_5PETSc_PyPetscPC_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscKSP_New(KSP); /*proto*/ static KSP __pyx_f_8petsc4py_5PETSc_PyPetscKSP_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscSNES_New(SNES); /*proto*/ static SNES __pyx_f_8petsc4py_5PETSc_PyPetscSNES_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscTS_New(TS); /*proto*/ static TS __pyx_f_8petsc4py_5PETSc_PyPetscTS_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscTAO_New(Tao); /*proto*/ static Tao __pyx_f_8petsc4py_5PETSc_PyPetscTAO_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscAO_New(AO); /*proto*/ static AO __pyx_f_8petsc4py_5PETSc_PyPetscAO_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscDM_New(DM); /*proto*/ static DM __pyx_f_8petsc4py_5PETSc_PyPetscDM_Get(PyObject *); /*proto*/ static PyObject *__pyx_f_8petsc4py_5PETSc_PyPetscPartitioner_New(PetscPartitioner); /*proto*/ static PetscPartitioner __pyx_f_8petsc4py_5PETSc_PyPetscPartitioner_Get(PyObject *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_traceback(MPI_Comm, int, const char *, const char *, int, PetscErrorType, const char *, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_PetscPythonErrorHandler(MPI_Comm, int, const char *, const char *, int, PetscErrorType, const char *, void *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_getinitargs(PyObject *, int *, char ***); /*proto*/ static void __pyx_f_8petsc4py_5PETSc_delinitargs(int *, char ***); /*proto*/ static void __pyx_f_8petsc4py_5PETSc_finalize(void); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_initialize(PyObject *, PyObject *); /*proto*/ static int __pyx_f_8petsc4py_5PETSc_register(void); /*proto*/ #define __Pyx_MODULE_NAME "petsc4py.PETSc" int __pyx_module_is_main_petsc4py__PETSc = 0; /* Implementation of 'petsc4py.PETSc' */ static PyObject *__pyx_builtin_object; static PyObject *__pyx_builtin_RuntimeError; static PyObject *__pyx_builtin_ValueError; static PyObject *__pyx_builtin_TypeError; static PyObject *__pyx_builtin_KeyError; static PyObject *__pyx_builtin_SystemError; static PyObject *__pyx_builtin_Ellipsis; static PyObject *__pyx_builtin_NotImplementedError; static PyObject *__pyx_builtin_enumerate; static PyObject *__pyx_builtin_range; static PyObject *__pyx_builtin_NotImplemented; static PyObject *__pyx_builtin_AttributeError; static PyObject *__pyx_builtin_MemoryError; static const char __pyx_k_A[] = "A"; static const char __pyx_k_B[] = "B"; static const char __pyx_k_C[] = "C"; static const char __pyx_k_H[] = "H"; static const char __pyx_k_I[] = "I"; static const char __pyx_k_J[] = "J"; static const char __pyx_k_L[] = "L"; static const char __pyx_k_O[] = "O"; static const char __pyx_k_P[] = "P"; static const char __pyx_k_R[] = "R"; static const char __pyx_k_S[] = "S"; static const char __pyx_k_U[] = "U"; static const char __pyx_k_V[] = "V"; static const char __pyx_k_W[] = "W"; static const char __pyx_k_X[] = "X"; static const char __pyx_k_a[] = "a"; static const char __pyx_k_b[] = "b"; static const char __pyx_k_c[] = "c"; static const char __pyx_k_f[] = "f"; static const char __pyx_k_g[] = "g"; static const char __pyx_k_l[] = "l"; static const char __pyx_k_n[] = "n"; static const char __pyx_k_p[] = "p"; static const char __pyx_k_r[] = "r"; static const char __pyx_k_s[] = "%s"; static const char __pyx_k_t[] = "t"; static const char __pyx_k_u[] = "u"; static const char __pyx_k_v[] = "v"; static const char __pyx_k_w[] = "w"; static const char __pyx_k_x[] = "x"; static const char __pyx_k_y[] = "y"; static const char __pyx_k_AU[] = "AU"; static const char __pyx_k_BE[] = "BE"; static const char __pyx_k_CG[] = "CG"; static const char __pyx_k_CN[] = "CN"; static const char __pyx_k_CP[] = "CP"; static const char __pyx_k_CR[] = "CR"; static const char __pyx_k_DA[] = "DA"; static const char __pyx_k_FE[] = "FE"; static const char __pyx_k_GL[] = "GL"; static const char __pyx_k_IS[] = "IS"; static const char __pyx_k_LU[] = "LU"; static const char __pyx_k_MG[] = "MG"; static const char __pyx_k_ML[] = "ML"; static const char __pyx_k_MS[] = "MS"; static const char __pyx_k_N1[] = "N1"; static const char __pyx_k_N2[] = "N2"; static const char __pyx_k_ND[] = "ND"; static const char __pyx_k_NM[] = "NM"; static const char __pyx_k_NN[] = "NN"; static const char __pyx_k_NO[] = "NO"; static const char __pyx_k_NZ[] = "NZ"; static const char __pyx_k_P1[] = "P1"; static const char __pyx_k_PD[] = "PD"; static const char __pyx_k_Q0[] = "Q0"; static const char __pyx_k_Q1[] = "Q1"; static const char __pyx_k_QN[] = "QN"; static const char __pyx_k_RK[] = "RK"; static const char __pyx_k_TH[] = "TH"; static const char __pyx_k_UA[] = "UA"; static const char __pyx_k_VU[] = "VU"; static const char __pyx_k__2[] = " "; static const char __pyx_k__5[] = "-"; static const char __pyx_k_au[] = "au"; static const char __pyx_k_bs[] = "bs"; static const char __pyx_k_da[] = "da"; static const char __pyx_k_dm[] = "dm"; static const char __pyx_k_dt[] = "dt"; static const char __pyx_k_gv[] = "gv"; static const char __pyx_k_lv[] = "lv"; static const char __pyx_k_na[] = "na"; static const char __pyx_k_p1[] = "p1"; static const char __pyx_k_pc[] = "pc"; static const char __pyx_k_pd[] = "pd"; static const char __pyx_k_q0[] = "q0"; static const char __pyx_k_q1[] = "q1"; static const char __pyx_k_rw[] = "rw"; static const char __pyx_k_sf[] = "sf"; static const char __pyx_k_sx[] = "sx"; static const char __pyx_k_ua[] = "ua"; static const char __pyx_k_vg[] = "vg"; static const char __pyx_k_vl[] = "vl"; static const char __pyx_k_vn[] = "vn"; static const char __pyx_k_xl[] = "xl"; static const char __pyx_k_xu[] = "xu"; static const char __pyx_k_A11[] = "A11"; static const char __pyx_k_ADD[] = "ADD"; static const char __pyx_k_AGG[] = "AGG"; static const char __pyx_k_AIJ[] = "AIJ"; static const char __pyx_k_AMD[] = "AMD"; static const char __pyx_k_ASM[] = "ASM"; static const char __pyx_k_BDF[] = "BDF"; static const char __pyx_k_BOX[] = "BOX"; static const char __pyx_k_CGS[] = "CGS"; static const char __pyx_k_DOF[] = "DOF"; static const char __pyx_k_Dup[] = "Dup"; static const char __pyx_k_FAS[] = "FAS"; static const char __pyx_k_FCG[] = "FCG"; static const char __pyx_k_FFT[] = "FFT"; static const char __pyx_k_FRB[] = "FRB"; static const char __pyx_k_GCR[] = "GCR"; static const char __pyx_k_GEO[] = "GEO"; static const char __pyx_k_ICC[] = "ICC"; static const char __pyx_k_ILU[] = "ILU"; static const char __pyx_k_INF[] = "INF"; static const char __pyx_k_IPM[] = "IPM"; static const char __pyx_k_KSP[] = "KSP"; static const char __pyx_k_LCD[] = "LCD"; static const char __pyx_k_LCL[] = "LCL"; static const char __pyx_k_LRC[] = "LRC"; static const char __pyx_k_LSC[] = "LSC"; static const char __pyx_k_MAT[] = "MAT"; static const char __pyx_k_MAX[] = "MAX"; static const char __pyx_k_MPI[] = "MPI"; static const char __pyx_k_N12[] = "N12"; static const char __pyx_k_NCG[] = "NCG"; static const char __pyx_k_NGS[] = "NGS"; static const char __pyx_k_NLS[] = "NLS"; static const char __pyx_k_NTL[] = "NTL"; static const char __pyx_k_NTR[] = "NTR"; static const char __pyx_k_OWD[] = "OWD"; static const char __pyx_k_QCG[] = "QCG"; static const char __pyx_k_QMD[] = "QMD"; static const char __pyx_k_RCM[] = "RCM"; static const char __pyx_k_SEQ[] = "SEQ"; static const char __pyx_k_SOR[] = "SOR"; static const char __pyx_k_SPD[] = "SPD"; static const char __pyx_k_SSP[] = "SSP"; static const char __pyx_k_SVD[] = "SVD"; static const char __pyx_k_TFS[] = "TFS"; static const char __pyx_k_VTK[] = "VTK"; static const char __pyx_k_WBM[] = "WBM"; static const char __pyx_k__10[] = ""; static const char __pyx_k__32[] = "\n"; static const char __pyx_k_a_2[] = "a+"; static const char __pyx_k_all[] = "all"; static const char __pyx_k_app[] = "app"; static const char __pyx_k_box[] = "box"; static const char __pyx_k_c_d[] = "=%c%d"; static const char __pyx_k_col[] = "col"; static const char __pyx_k_csr[] = "csr"; static const char __pyx_k_d_s[] = "[%*d] %s"; static const char __pyx_k_dim[] = "dim"; static const char __pyx_k_doc[] = "__doc__"; static const char __pyx_k_dof[] = "dof"; static const char __pyx_k_end[] = "end"; static const char __pyx_k_get[] = "get"; static const char __pyx_k_idx[] = "idx"; static const char __pyx_k_its[] = "its"; static const char __pyx_k_ksp[] = "ksp"; static const char __pyx_k_mat[] = "mat"; static const char __pyx_k_nnz[] = "nnz"; static const char __pyx_k_nsd[] = "nsd"; static const char __pyx_k_nsp[] = "nsp"; static const char __pyx_k_obj[] = "obj"; static const char __pyx_k_out[] = "out"; static const char __pyx_k_ozz[] = "ozz"; static const char __pyx_k_pop[] = "pop"; static const char __pyx_k_pre[] = "pre"; static const char __pyx_k_r_2[] = "r+"; static const char __pyx_k_rhs[] = "rhs"; static const char __pyx_k_row[] = "row"; static const char __pyx_k_s_s[] = "-%s%s"; static const char __pyx_k_sec[] = "sec"; static const char __pyx_k_sep[] = "sep"; static const char __pyx_k_str[] = "__str__"; static const char __pyx_k_tab[] = "tab"; static const char __pyx_k_tol[] = "tol"; static const char __pyx_k_val[] = "val"; static const char __pyx_k_vec[] = "vec"; static const char __pyx_k_vlg[] = "vlg"; static const char __pyx_k_w_2[] = "w+"; static const char __pyx_k_zoz[] = "zoz"; static const char __pyx_k_zzo[] = "zzo"; static const char __pyx_k_BAIJ[] = "BAIJ"; static const char __pyx_k_BCGS[] = "BCGS"; static const char __pyx_k_BDDC[] = "BDDC"; static const char __pyx_k_BFBT[] = "BFBT"; static const char __pyx_k_BICG[] = "BICG"; static const char __pyx_k_BMRM[] = "BMRM"; static const char __pyx_k_CGLS[] = "CGLS"; static const char __pyx_k_CGNE[] = "CGNE"; static const char __pyx_k_CUSP[] = "CUSP"; static const char __pyx_k_DAAD[] = "DAAD"; static const char __pyx_k_DIAG[] = "DIAG"; static const char __pyx_k_DRAW[] = "DRAW"; static const char __pyx_k_DROP[] = "DROP"; static const char __pyx_k_FFTW[] = "FFTW"; static const char __pyx_k_FULL[] = "FULL"; static const char __pyx_k_Free[] = "Free"; static const char __pyx_k_GAMG[] = "GAMG"; static const char __pyx_k_GASM[] = "GASM"; static const char __pyx_k_GLTR[] = "GLTR"; static const char __pyx_k_GPCG[] = "GPCG"; static const char __pyx_k_HALF[] = "HALF"; static const char __pyx_k_HDF5[] = "HDF5"; static const char __pyx_k_LEFT[] = "LEFT"; static const char __pyx_k_LMVM[] = "LMVM"; static const char __pyx_k_LSQR[] = "LSQR"; static const char __pyx_k_Left[] = "Left"; static const char __pyx_k_MAIJ[] = "MAIJ"; static const char __pyx_k_MASK[] = "MASK"; static const char __pyx_k_MFFD[] = "MFFD"; static const char __pyx_k_MOAB[] = "MOAB"; static const char __pyx_k_Mode[] = "Mode"; static const char __pyx_k_NASH[] = "NASH"; static const char __pyx_k_NASM[] = "NASM"; static const char __pyx_k_NEST[] = "NEST"; static const char __pyx_k_NONE[] = "NONE"; static const char __pyx_k_PFMG[] = "PFMG"; static const char __pyx_k_PLEX[] = "PLEX"; static const char __pyx_k_RAND[] = "RAND"; static const char __pyx_k_READ[] = "READ"; static const char __pyx_k_ROSW[] = "ROSW"; static const char __pyx_k_SAME[] = "SAME"; static const char __pyx_k_SAWS[] = "SAWS"; static const char __pyx_k_SELF[] = "SELF"; static const char __pyx_k_SPAI[] = "SPAI"; static const char __pyx_k_STAR[] = "STAR"; static const char __pyx_k_STCG[] = "STCG"; static const char __pyx_k_Side[] = "Side"; static const char __pyx_k_Size[] = "Size"; static const char __pyx_k_TEST[] = "TEST"; static const char __pyx_k_TRON[] = "TRON"; static const char __pyx_k_Type[] = "Type"; static const char __pyx_k_USER[] = "USER"; static const char __pyx_k_addv[] = "addv"; static const char __pyx_k_args[] = "args"; static const char __pyx_k_atol[] = "atol"; static const char __pyx_k_attr[] = "attr"; static const char __pyx_k_axpy[] = "axpy"; static const char __pyx_k_beta[] = "beta"; static const char __pyx_k_cell[] = "cell"; static const char __pyx_k_cgid[] = "cgid"; static const char __pyx_k_cmap[] = "cmap"; static const char __pyx_k_cols[] = "cols"; static const char __pyx_k_comm[] = "comm"; static const char __pyx_k_cone[] = "cone"; static const char __pyx_k_copy[] = "copy"; static const char __pyx_k_data[] = "data"; static const char __pyx_k_date[] = "date"; static const char __pyx_k_diag[] = "diag"; static const char __pyx_k_dims[] = "dims"; static const char __pyx_k_drop[] = "drop"; static const char __pyx_k_exit[] = "__exit__"; static const char __pyx_k_fill[] = "fill"; static const char __pyx_k_flag[] = "flag"; static const char __pyx_k_gtol[] = "gtol"; static const char __pyx_k_gvec[] = "gvec"; static const char __pyx_k_idxm[] = "idxm"; static const char __pyx_k_ierr[] = "ierr"; static const char __pyx_k_imag[] = "imag"; static const char __pyx_k_imex[] = "imex"; static const char __pyx_k_info[] = "info"; static const char __pyx_k_init[] = "__init__"; static const char __pyx_k_iset[] = "iset"; static const char __pyx_k_ival[] = "ival"; static const char __pyx_k_join[] = "join"; static const char __pyx_k_keys[] = "keys"; static const char __pyx_k_kind[] = "kind"; static const char __pyx_k_left[] = "left"; static const char __pyx_k_lits[] = "lits"; static const char __pyx_k_locs[] = "locs"; static const char __pyx_k_ltog[] = "ltog"; static const char __pyx_k_ltol[] = "ltol"; static const char __pyx_k_main[] = "__main__"; static const char __pyx_k_mats[] = "mats"; static const char __pyx_k_memo[] = "memo"; static const char __pyx_k_mode[] = "mode"; static const char __pyx_k_mult[] = "mult"; static const char __pyx_k_name[] = "name"; static const char __pyx_k_nmax[] = "nmax"; static const char __pyx_k_nmin[] = "nmin"; static const char __pyx_k_none[] = "none"; static const char __pyx_k_norm[] = "norm"; static const char __pyx_k_opts[] = "opts"; static const char __pyx_k_pEnd[] = "pEnd"; static const char __pyx_k_perm[] = "perm"; static const char __pyx_k_push[] = "push"; static const char __pyx_k_rank[] = "rank"; static const char __pyx_k_real[] = "real"; static const char __pyx_k_repr[] = "__repr__"; static const char __pyx_k_rmap[] = "rmap"; static const char __pyx_k_rows[] = "rows"; static const char __pyx_k_rtol[] = "rtol"; static const char __pyx_k_seed[] = "seed"; static const char __pyx_k_self[] = "self"; static const char __pyx_k_side[] = "side"; static const char __pyx_k_size[] = "size"; static const char __pyx_k_snes[] = "snes"; static const char __pyx_k_star[] = "star"; static const char __pyx_k_step[] = "step"; static const char __pyx_k_stol[] = "stol"; static const char __pyx_k_stop[] = "stop"; static const char __pyx_k_supp[] = "supp"; static const char __pyx_k_time[] = "time"; static const char __pyx_k_vecs[] = "vecs"; static const char __pyx_k_view[] = "view"; static const char __pyx_k_xdot[] = "xdot"; static const char __pyx_k_xmax[] = "xmax"; static const char __pyx_k_xmin[] = "xmin"; static const char __pyx_k_ymax[] = "ymax"; static const char __pyx_k_ymin[] = "ymin"; static const char __pyx_k_zmax[] = "zmax"; static const char __pyx_k_zmin[] = "zmin"; static const char __pyx_k_ALPHA[] = "ALPHA"; static const char __pyx_k_ASCII[] = "ASCII"; static const char __pyx_k_ASFLS[] = "ASFLS"; static const char __pyx_k_ASILS[] = "ASILS"; static const char __pyx_k_ASPIN[] = "ASPIN"; static const char __pyx_k_BASIC[] = "BASIC"; static const char __pyx_k_BCGSL[] = "BCGSL"; static const char __pyx_k_BLMVM[] = "BLMVM"; static const char __pyx_k_BLOCK[] = "BLOCK"; static const char __pyx_k_BQPIP[] = "BQPIP"; static const char __pyx_k_BSTRM[] = "BSTRM"; static const char __pyx_k_CHACO[] = "CHACO"; static const char __pyx_k_Class[] = "Class"; static const char __pyx_k_Clone[] = "Clone"; static const char __pyx_k_DENSE[] = "DENSE"; static const char __pyx_k_EIMEX[] = "EIMEX"; static const char __pyx_k_EULER[] = "EULER"; static const char __pyx_k_Error[] = "Error"; static const char __pyx_k_Event[] = "Event"; static const char __pyx_k_FBCGS[] = "FBCGS"; static const char __pyx_k_FINAL[] = "FINAL"; static const char __pyx_k_FLUSH[] = "FLUSH"; static const char __pyx_k_GMRES[] = "GMRES"; static const char __pyx_k_HYPRE[] = "HYPRE"; static const char __pyx_k_IBCGS[] = "IBCGS"; static const char __pyx_k_LOCAL[] = "LOCAL"; static const char __pyx_k_LOWER[] = "LOWER"; static const char __pyx_k_MIMEX[] = "MIMEX"; static const char __pyx_k_OWLQN[] = "OWLQN"; static const char __pyx_k_PARMS[] = "PARMS"; static const char __pyx_k_PATCH[] = "PATCH"; static const char __pyx_k_Print[] = "Print"; static const char __pyx_k_RIGHT[] = "RIGHT"; static const char __pyx_k_Right[] = "Right"; static const char __pyx_k_SBAIJ[] = "SBAIJ"; static const char __pyx_k_SCHUR[] = "SCHUR"; static const char __pyx_k_SELFP[] = "SELFP"; static const char __pyx_k_SHELL[] = "SHELL"; static const char __pyx_k_SPRNG[] = "SPRNG"; static const char __pyx_k_SSFLS[] = "SSFLS"; static const char __pyx_k_SSILS[] = "SSILS"; static const char __pyx_k_Stage[] = "Stage"; static const char __pyx_k_TCQMR[] = "TCQMR"; static const char __pyx_k_TFQMR[] = "TFQMR"; static const char __pyx_k_THETA[] = "THETA"; static const char __pyx_k_THIRD[] = "THIRD"; static const char __pyx_k_TSIRM[] = "TSIRM"; static const char __pyx_k_TWIST[] = "TWIST"; static const char __pyx_k_UPPER[] = "UPPER"; static const char __pyx_k_WRITE[] = "WRITE"; static const char __pyx_k_abort[] = "abort"; static const char __pyx_k_alpha[] = "alpha"; static const char __pyx_k_apply[] = "apply"; static const char __pyx_k_array[] = "array"; static const char __pyx_k_begin[] = "begin"; static const char __pyx_k_bsize[] = "bsize"; static const char __pyx_k_catol[] = "catol"; static const char __pyx_k_cells[] = "cells"; static const char __pyx_k_comms[] = "comms"; static const char __pyx_k_count[] = "count"; static const char __pyx_k_crank[] = "crank"; static const char __pyx_k_crtol[] = "crtol"; static const char __pyx_k_csize[] = "csize"; static const char __pyx_k_ctype[] = "ctype"; static const char __pyx_k_devel[] = "devel"; static const char __pyx_k_dtcol[] = "dtcol"; static const char __pyx_k_edges[] = "edges"; static const char __pyx_k_emacs[] = "emacs"; static const char __pyx_k_enter[] = "__enter__"; static const char __pyx_k_entry[] = "entry"; static const char __pyx_k_exoid[] = "exoid"; static const char __pyx_k_faces[] = "faces"; static const char __pyx_k_field[] = "field"; static const char __pyx_k_first[] = "first"; static const char __pyx_k_flops[] = "flops"; static const char __pyx_k_flush[] = "flush"; static const char __pyx_k_fnorm[] = "fnorm"; static const char __pyx_k_force[] = "force"; static const char __pyx_k_gamma[] = "gamma"; static const char __pyx_k_gatol[] = "gatol"; static const char __pyx_k_getDM[] = "getDM"; static const char __pyx_k_getPC[] = "getPC"; static const char __pyx_k_group[] = "group"; static const char __pyx_k_grtol[] = "grtol"; static const char __pyx_k_gttol[] = "gttol"; static const char __pyx_k_icntl[] = "icntl"; static const char __pyx_k_imode[] = "imode"; static const char __pyx_k_index[] = "index"; static const char __pyx_k_is_to[] = "is_to"; static const char __pyx_k_iscol[] = "iscol"; static const char __pyx_k_isets[] = "isets"; static const char __pyx_k_isrow[] = "isrow"; static const char __pyx_k_kargs[] = "kargs"; static const char __pyx_k_klass[] = "klass"; static const char __pyx_k_label[] = "label"; static const char __pyx_k_level[] = "level"; static const char __pyx_k_lgmap[] = "lgmap"; static const char __pyx_k_local[] = "local"; static const char __pyx_k_lower[] = "lower"; static const char __pyx_k_lvecs[] = "lvecs"; static const char __pyx_k_major[] = "major"; static const char __pyx_k_minor[] = "minor"; static const char __pyx_k_model[] = "model"; static const char __pyx_k_omega[] = "omega"; static const char __pyx_k_order[] = "order"; static const char __pyx_k_otype[] = "otype"; static const char __pyx_k_patch[] = "patch"; static const char __pyx_k_petsc[] = "petsc"; static const char __pyx_k_point[] = "point"; static const char __pyx_k_ptype[] = "ptype"; static const char __pyx_k_range[] = "range"; static const char __pyx_k_ready[] = "ready"; static const char __pyx_k_reset[] = "reset"; static const char __pyx_k_reuse[] = "reuse"; static const char __pyx_k_right[] = "right"; static const char __pyx_k_rnorm[] = "rnorm"; static const char __pyx_k_scale[] = "scale"; static const char __pyx_k_setDM[] = "setDM"; static const char __pyx_k_setup[] = "setup"; static const char __pyx_k_shape[] = "shape"; static const char __pyx_k_shift[] = "shift"; static const char __pyx_k_sizes[] = "sizes"; static const char __pyx_k_sleep[] = "sleep"; static const char __pyx_k_solve[] = "solve"; static const char __pyx_k_split[] = "split"; static const char __pyx_k_stage[] = "stage"; static const char __pyx_k_start[] = "start"; static const char __pyx_k_state[] = "state"; static const char __pyx_k_strip[] = "strip"; static const char __pyx_k_theta[] = "theta"; static const char __pyx_k_title[] = "title"; static const char __pyx_k_toAll[] = "toAll"; static const char __pyx_k_twist[] = "twist"; static const char __pyx_k_upper[] = "upper"; static const char __pyx_k_value[] = "value"; static const char __pyx_k_width[] = "width"; static const char __pyx_k_xnorm[] = "xnorm"; static const char __pyx_k_ynorm[] = "ynorm"; static const char __pyx_k_ADD_BC[] = "ADD_BC"; static const char __pyx_k_AIJCRL[] = "AIJCRL"; static const char __pyx_k_ALPHA2[] = "ALPHA2"; static const char __pyx_k_ALWAYS[] = "ALWAYS"; static const char __pyx_k_AOType[] = "AOType"; static const char __pyx_k_APPEND[] = "APPEND"; static const char __pyx_k_BEULER[] = "BEULER"; static const char __pyx_k_BINARY[] = "BINARY"; static const char __pyx_k_DECIDE[] = "DECIDE"; static const char __pyx_k_DGMRES[] = "DGMRES"; static const char __pyx_k_DMType[] = "DMType"; static const char __pyx_k_EXOTIC[] = "EXOTIC"; static const char __pyx_k_FBCGSR[] = "FBCGSR"; static const char __pyx_k_FGMRES[] = "FGMRES"; static const char __pyx_k_Format[] = "Format"; static const char __pyx_k_INSERT[] = "INSERT"; static const char __pyx_k_ISType[] = "ISType"; static const char __pyx_k_JACOBI[] = "JACOBI"; static const char __pyx_k_LGMRES[] = "LGMRES"; static const char __pyx_k_LINEAR[] = "LINEAR"; static const char __pyx_k_MATLAB[] = "MATLAB"; static const char __pyx_k_MGType[] = "MGType"; static const char __pyx_k_MINRES[] = "MINRES"; static const char __pyx_k_MIRROR[] = "MIRROR"; static const char __pyx_k_MPIADJ[] = "MPIADJ"; static const char __pyx_k_MPIAIJ[] = "MPIAIJ"; static const char __pyx_k_NATIVE[] = "NATIVE"; static const char __pyx_k_NETCDF[] = "NETCDF"; static const char __pyx_k_NGMRES[] = "NGMRES"; static const char __pyx_k_NORMAL[] = "NORMAL"; static const char __pyx_k_NORM_1[] = "NORM_1"; static const char __pyx_k_NORM_2[] = "NORM_2"; static const char __pyx_k_Option[] = "Option"; static const char __pyx_k_PCSide[] = "PCSide"; static const char __pyx_k_PCType[] = "PCType"; static const char __pyx_k_PGMRES[] = "PGMRES"; static const char __pyx_k_PIPECG[] = "PIPECG"; static const char __pyx_k_PIPECR[] = "PIPECR"; static const char __pyx_k_PSEUDO[] = "PSEUDO"; static const char __pyx_k_PYTHON[] = "PYTHON"; static const char __pyx_k_RAND48[] = "RAND48"; static const char __pyx_k_Reason[] = "Reason"; static const char __pyx_k_SACUSP[] = "SACUSP"; static const char __pyx_k_SBSTRM[] = "SBSTRM"; static const char __pyx_k_SEQAIJ[] = "SEQAIJ"; static const char __pyx_k_SFType[] = "SFType"; static const char __pyx_k_SHARED[] = "SHARED"; static const char __pyx_k_SLICED[] = "SLICED"; static const char __pyx_k_SOCKET[] = "SOCKET"; static const char __pyx_k_STDERR[] = "STDERR"; static const char __pyx_k_STDOUT[] = "STDOUT"; static const char __pyx_k_STRIDE[] = "STRIDE"; static const char __pyx_k_STRING[] = "STRING"; static const char __pyx_k_SUBSET[] = "SUBSET"; static const char __pyx_k_SYMMLQ[] = "SYMMLQ"; static const char __pyx_k_TSType[] = "TSType"; static const char __pyx_k_UPDATE[] = "UPDATE"; static const char __pyx_k_WINDOW[] = "WINDOW"; static const char __pyx_k_alpha2[] = "alpha2"; static const char __pyx_k_alphas[] = "alphas"; static const char __pyx_k_amount[] = "amount"; static const char __pyx_k_appctx[] = "appctx"; static const char __pyx_k_append[] = "append"; static const char __pyx_k_author[] = "author"; static const char __pyx_k_column[] = "column"; static const char __pyx_k_coords[] = "coords"; static const char __pyx_k_decode[] = "decode"; static const char __pyx_k_decomp[] = "decomp"; static const char __pyx_k_design[] = "design"; static const char __pyx_k_divtol[] = "divtol"; static const char __pyx_k_encode[] = "encode"; static const char __pyx_k_eqtype[] = "eqtype"; static const char __pyx_k_format[] = "format"; static const char __pyx_k_getDim[] = "getDim"; static const char __pyx_k_getDof[] = "getDof"; static const char __pyx_k_getKSP[] = "getKSP"; static const char __pyx_k_getNPC[] = "getNPC"; static const char __pyx_k_getRhs[] = "getRhs"; static const char __pyx_k_ghosts[] = "ghosts"; static const char __pyx_k_handle[] = "handle"; static const char __pyx_k_ignore[] = "ignore"; static const char __pyx_k_import[] = "__import__"; static const char __pyx_k_insert[] = "insert"; static const char __pyx_k_invert[] = "invert"; static const char __pyx_k_iscols[] = "iscols"; static const char __pyx_k_isperm[] = "isperm"; static const char __pyx_k_isrows[] = "isrows"; static const char __pyx_k_length[] = "length"; static const char __pyx_k_levels[] = "levels"; static const char __pyx_k_max_it[] = "max_it"; static const char __pyx_k_memory[] = "memory"; static const char __pyx_k_mgtype[] = "mgtype"; static const char __pyx_k_mirror[] = "mirror"; static const char __pyx_k_module[] = "__module__"; static const char __pyx_k_mpi4py[] = "mpi4py"; static const char __pyx_k_name_2[] = "__name__"; static const char __pyx_k_ncycle[] = "ncycle"; static const char __pyx_k_newsec[] = "newsec"; static const char __pyx_k_newvec[] = "newvec"; static const char __pyx_k_nlocal[] = "nlocal"; static const char __pyx_k_nroots[] = "nroots"; static const char __pyx_k_numDof[] = "numDof"; static const char __pyx_k_nzdiag[] = "nzdiag"; static const char __pyx_k_object[] = "object"; static const char __pyx_k_offset[] = "offset"; static const char __pyx_k_option[] = "option"; static const char __pyx_k_output[] = "output"; static const char __pyx_k_pStart[] = "pStart"; static const char __pyx_k_parent[] = "parent"; static const char __pyx_k_points[] = "points"; static const char __pyx_k_prefix[] = "prefix"; static const char __pyx_k_python[] = "python"; static const char __pyx_k_radius[] = "radius"; static const char __pyx_k_random[] = "random"; static const char __pyx_k_reason[] = "reason"; static const char __pyx_k_refine[] = "refine"; static const char __pyx_k_remote[] = "remote"; static const char __pyx_k_remove[] = "remove"; static const char __pyx_k_result[] = "result"; static const char __pyx_k_rowmap[] = "rowmap"; static const char __pyx_k_rscale[] = "rscale"; static const char __pyx_k_rtol_0[] = "rtol_0"; static const char __pyx_k_setKSP[] = "setKSP"; static const char __pyx_k_setNPC[] = "setNPC"; static const char __pyx_k_solver[] = "solver"; static const char __pyx_k_starts[] = "starts"; static const char __pyx_k_submat[] = "submat"; static const char __pyx_k_subvec[] = "subvec"; static const char __pyx_k_svalue[] = "svalue"; static const char __pyx_k_tbline[] = "tbline"; static const char __pyx_k_tblist[] = "tblist"; static const char __pyx_k_toZero[] = "toZero"; static const char __pyx_k_update[] = "update"; static const char __pyx_k_values[] = "values"; static const char __pyx_k_vec_to[] = "vec_to"; static const char __pyx_k_viewer[] = "viewer"; static const char __pyx_k_ADD_ALL[] = "ADD_ALL"; static const char __pyx_k_AIJCUSP[] = "AIJCUSP"; static const char __pyx_k_AIJPERM[] = "AIJPERM"; static const char __pyx_k_ARKIMEX[] = "ARKIMEX"; static const char __pyx_k_ASMType[] = "ASMType"; static const char __pyx_k_BJACOBI[] = "BJACOBI"; static const char __pyx_k_Barrier[] = "Barrier"; static const char __pyx_k_DEFAULT[] = "DEFAULT"; static const char __pyx_k_DRAW_LG[] = "DRAW_LG"; static const char __pyx_k_FORWARD[] = "FORWARD"; static const char __pyx_k_GENERAL[] = "GENERAL"; static const char __pyx_k_GHOSTED[] = "GHOSTED"; static const char __pyx_k_GROPPCG[] = "GROPPCG"; static const char __pyx_k_IntType[] = "IntType"; static const char __pyx_k_KASKADE[] = "KASKADE"; static const char __pyx_k_KSPONLY[] = "KSPONLY"; static const char __pyx_k_KSPType[] = "KSPType"; static const char __pyx_k_MAPPING[] = "MAPPING"; static const char __pyx_k_MPIBAIJ[] = "MPIBAIJ"; static const char __pyx_k_MPICUSP[] = "MPICUSP"; static const char __pyx_k_MPIMAIJ[] = "MPIMAIJ"; static const char __pyx_k_MapType[] = "MapType"; static const char __pyx_k_MatType[] = "MatType"; static const char __pyx_k_NATURAL[] = "NATURAL"; static const char __pyx_k_NETWORK[] = "NETWORK"; static const char __pyx_k_NONZERO[] = "NONZERO"; static const char __pyx_k_PIPEFCG[] = "PIPEFCG"; static const char __pyx_k_PIPEGCR[] = "PIPEGCR"; static const char __pyx_k_PREONLY[] = "PREONLY"; static const char __pyx_k_QUARTER[] = "QUARTER"; static const char __pyx_k_REVERSE[] = "REVERSE"; static const char __pyx_k_SAME_NZ[] = "SAME_NZ"; static const char __pyx_k_SCATTER[] = "SCATTER"; static const char __pyx_k_SEQBAIJ[] = "SEQBAIJ"; static const char __pyx_k_SEQCUSP[] = "SEQCUSP"; static const char __pyx_k_SEQMAIJ[] = "SEQMAIJ"; static const char __pyx_k_SORType[] = "SORType"; static const char __pyx_k_SPECIAL[] = "SPECIAL"; static const char __pyx_k_SYSPFMG[] = "SYSPFMG"; static const char __pyx_k_Stencil[] = "Stencil"; static const char __pyx_k_TAOType[] = "TAOType"; static const char __pyx_k_VTK_VTR[] = "VTK_VTR"; static const char __pyx_k_VTK_VTS[] = "VTK_VTS"; static const char __pyx_k_VTK_VTU[] = "VTK_VTU"; static const char __pyx_k_VecType[] = "VecType"; static const char __pyx_k_alpha_f[] = "alpha_f"; static const char __pyx_k_alpha_m[] = "alpha_m"; static const char __pyx_k_array_w[] = "array_w"; static const char __pyx_k_asmtype[] = "asmtype"; static const char __pyx_k_barrier[] = "barrier"; static const char __pyx_k_bcComps[] = "bcComps"; static const char __pyx_k_bcField[] = "bcField"; static const char __pyx_k_coarsen[] = "coarsen"; static const char __pyx_k_conePos[] = "conePos"; static const char __pyx_k_context[] = "context"; static const char __pyx_k_default[] = "default"; static const char __pyx_k_destroy[] = "destroy"; static const char __pyx_k_display[] = "display"; static const char __pyx_k_dm_type[] = "dm_type"; static const char __pyx_k_dtcount[] = "dtcount"; static const char __pyx_k_forward[] = "forward"; static const char __pyx_k_getComm[] = "getComm"; static const char __pyx_k_getInfo[] = "getInfo"; static const char __pyx_k_getName[] = "getName"; static const char __pyx_k_getRank[] = "getRank"; static const char __pyx_k_getSNES[] = "getSNES"; static const char __pyx_k_getSeed[] = "getSeed"; static const char __pyx_k_getSize[] = "getSize"; static const char __pyx_k_getTime[] = "getTime"; static const char __pyx_k_getType[] = "getType"; static const char __pyx_k_getVecs[] = "getVecs"; static const char __pyx_k_ghosted[] = "ghosted"; static const char __pyx_k_hasName[] = "hasName"; static const char __pyx_k_hessian[] = "hessian"; static const char __pyx_k_indices[] = "indices"; static const char __pyx_k_is_from[] = "is_from"; static const char __pyx_k_is_type[] = "is_type"; static const char __pyx_k_mallocs[] = "mallocs"; static const char __pyx_k_matMult[] = "matMult"; static const char __pyx_k_monitor[] = "monitor"; static const char __pyx_k_nleaves[] = "nleaves"; static const char __pyx_k_nlevels[] = "nlevels"; static const char __pyx_k_nonzero[] = "nonzero"; static const char __pyx_k_numComp[] = "numComp"; static const char __pyx_k_nz_used[] = "nz_used"; static const char __pyx_k_objgrad[] = "objgrad"; static const char __pyx_k_options[] = "options"; static const char __pyx_k_overlap[] = "overlap"; static const char __pyx_k_pc_type[] = "pc_type"; static const char __pyx_k_prepare[] = "__prepare__"; static const char __pyx_k_prestep[] = "prestep"; static const char __pyx_k_py_type[] = "py_type"; static const char __pyx_k_release[] = "release"; static const char __pyx_k_replace[] = "replace"; static const char __pyx_k_restart[] = "restart"; static const char __pyx_k_reverse[] = "reverse"; static const char __pyx_k_scatter[] = "scatter"; static const char __pyx_k_seconds[] = "seconds"; static const char __pyx_k_setName[] = "setName"; static const char __pyx_k_setSeed[] = "setSeed"; static const char __pyx_k_setTime[] = "setTime"; static const char __pyx_k_setType[] = "setType"; static const char __pyx_k_sf_type[] = "sf_type"; static const char __pyx_k_smooths[] = "smooths"; static const char __pyx_k_sortype[] = "sortype"; static const char __pyx_k_strides[] = "strides"; static const char __pyx_k_subcomm[] = "subcomm"; static const char __pyx_k_submats[] = "submats"; static const char __pyx_k_ts_type[] = "ts_type"; static const char __pyx_k_typestr[] = "typestr"; static const char __pyx_k_useCone[] = "useCone"; static const char __pyx_k_vectors[] = "vectors"; static const char __pyx_k_version[] = "version"; static const char __pyx_k_ADDITIVE[] = "ADDITIVE"; static const char __pyx_k_ADVANCED[] = "ADVANCED"; static const char __pyx_k_AINVCUSP[] = "AINVCUSP"; static const char __pyx_k_ANDERSON[] = "ANDERSON"; static const char __pyx_k_BLOCKMAT[] = "BLOCKMAT"; static const char __pyx_k_CHOLESKY[] = "CHOLESKY"; static const char __pyx_k_DrawSize[] = "DrawSize"; static const char __pyx_k_EXPLICIT[] = "EXPLICIT"; static const char __pyx_k_Ellipsis[] = "Ellipsis"; static const char __pyx_k_FileMode[] = "FileMode"; static const char __pyx_k_GALERKIN[] = "GALERKIN"; static const char __pyx_k_GAMGType[] = "GAMGType"; static const char __pyx_k_GASMType[] = "GASMType"; static const char __pyx_k_Get_rank[] = "Get_rank"; static const char __pyx_k_Get_size[] = "Get_size"; static const char __pyx_k_HDF5_VIZ[] = "HDF5_VIZ"; static const char __pyx_k_IMPLICIT[] = "IMPLICIT"; static const char __pyx_k_INBLOCKS[] = "INBLOCKS"; static const char __pyx_k_INFINITY[] = "INFINITY"; static const char __pyx_k_InfoType[] = "InfoType"; static const char __pyx_k_KACZMARZ[] = "KACZMARZ"; static const char __pyx_k_KeyError[] = "KeyError"; static const char __pyx_k_LOCALREF[] = "LOCALREF"; static const char __pyx_k_MPIBSTRM[] = "MPIBSTRM"; static const char __pyx_k_MPIDENSE[] = "MPIDENSE"; static const char __pyx_k_MPISBAIJ[] = "MPISBAIJ"; static const char __pyx_k_NEWTONLS[] = "NEWTONLS"; static const char __pyx_k_NEWTONTR[] = "NEWTONTR"; static const char __pyx_k_NOFORMAT[] = "NOFORMAT"; static const char __pyx_k_NORM_MAX[] = "NORM_MAX"; static const char __pyx_k_NormType[] = "NormType"; static const char __pyx_k_PARMETIS[] = "PARMETIS"; static const char __pyx_k_PBJACOBI[] = "PBJACOBI"; static const char __pyx_k_PCMGType[] = "PCMGType"; static const char __pyx_k_PERIODIC[] = "PERIODIC"; static const char __pyx_k_PIPECGRR[] = "PIPECGRR"; static const char __pyx_k_POUNDERS[] = "POUNDERS"; static const char __pyx_k_RANDER48[] = "RANDER48"; static const char __pyx_k_RESTRICT[] = "RESTRICT"; static const char __pyx_k_RealType[] = "RealType"; static const char __pyx_k_SEQBSTRM[] = "SEQBSTRM"; static const char __pyx_k_SEQCUFFT[] = "SEQCUFFT"; static const char __pyx_k_SEQDENSE[] = "SEQDENSE"; static const char __pyx_k_SEQSBAIJ[] = "SEQSBAIJ"; static const char __pyx_k_SNESType[] = "SNESType"; static const char __pyx_k_SPECTRAL[] = "SPECTRAL"; static const char __pyx_k_STANDARD[] = "STANDARD"; static const char __pyx_k_STEPOVER[] = "STEPOVER"; static const char __pyx_k_SUNDIALS[] = "SUNDIALS"; static const char __pyx_k_VIENNACL[] = "VIENNACL"; static const char __pyx_k_addFlops[] = "addFlops"; static const char __pyx_k_assembly[] = "assembly"; static const char __pyx_k_bcPoints[] = "bcPoints"; static const char __pyx_k_boundary[] = "boundary"; static const char __pyx_k_buffer_w[] = "buffer_w"; static const char __pyx_k_citation[] = "citation"; static const char __pyx_k_constant[] = "constant"; static const char __pyx_k_debugger[] = "debugger"; static const char __pyx_k_delValue[] = "delValue"; static const char __pyx_k_end_args[] = "end_args"; static const char __pyx_k_filename[] = "filename"; static const char __pyx_k_finalize[] = "_finalize"; static const char __pyx_k_function[] = "function"; static const char __pyx_k_gamgtype[] = "gamgtype"; static const char __pyx_k_gasmtype[] = "gasmtype"; static const char __pyx_k_getArray[] = "getArray"; static const char __pyx_k_getFlops[] = "getFlops"; static const char __pyx_k_getSizes[] = "getSizes"; static const char __pyx_k_getUseEW[] = "getUseEW"; static const char __pyx_k_getUseFD[] = "getUseFD"; static const char __pyx_k_getUseMF[] = "getUseMF"; static const char __pyx_k_getValue[] = "getValue"; static const char __pyx_k_gradient[] = "gradient"; static const char __pyx_k_hasLabel[] = "hasLabel"; static const char __pyx_k_inblocks[] = "inblocks"; static const char __pyx_k_interval[] = "interval"; static const char __pyx_k_isSorted[] = "isSorted"; static const char __pyx_k_itemsize[] = "itemsize"; static const char __pyx_k_jacobian[] = "jacobian"; static const char __pyx_k_ksp_type[] = "ksp_type"; static const char __pyx_k_localsec[] = "localsec"; static const char __pyx_k_logFlops[] = "logFlops"; static const char __pyx_k_map_type[] = "map_type"; static const char __pyx_k_mat_type[] = "mat_type"; static const char __pyx_k_max_time[] = "max_time"; static const char __pyx_k_mpiabort[] = "mpiabort"; static const char __pyx_k_normtype[] = "normtype"; static const char __pyx_k_nsubcomm[] = "nsubcomm"; static const char __pyx_k_numProcs[] = "numProcs"; static const char __pyx_k_numcells[] = "numcells"; static const char __pyx_k_only_and[] = "only '==' and '!='"; static const char __pyx_k_ord_type[] = "ord_type"; static const char __pyx_k_periodic[] = "periodic"; static const char __pyx_k_position[] = "position"; static const char __pyx_k_poststep[] = "poststep"; static const char __pyx_k_qualname[] = "__qualname__"; static const char __pyx_k_readonly[] = "readonly"; static const char __pyx_k_refine_x[] = "refine_x"; static const char __pyx_k_refine_y[] = "refine_y"; static const char __pyx_k_refine_z[] = "refine_z"; static const char __pyx_k_rnd_type[] = "rnd_type"; static const char __pyx_k_rtol_max[] = "rtol_max"; static const char __pyx_k_setSizes[] = "setSizes"; static const char __pyx_k_setUseEW[] = "setUseEW"; static const char __pyx_k_setUseFD[] = "setUseFD"; static const char __pyx_k_setUseMF[] = "setUseMF"; static const char __pyx_k_setValue[] = "setValue"; static const char __pyx_k_subminor[] = "subminor"; static const char __pyx_k_tao_type[] = "tao_type"; static const char __pyx_k_timestep[] = "timestep"; static const char __pyx_k_vec_from[] = "vec_from"; static const char __pyx_k_vec_type[] = "vec_type"; static const char __pyx_k_vwr_type[] = "vwr_type"; static const char __pyx_k_ASCII_VTK[] = "ASCII_VTK"; static const char __pyx_k_ASCII_XML[] = "ASCII_XML"; static const char __pyx_k_CARTESIAN[] = "CARTESIAN"; static const char __pyx_k_CHEBYSHEV[] = "CHEBYSHEV"; static const char __pyx_k_CLASSICAL[] = "CLASSICAL"; static const char __pyx_k_COMM_NULL[] = "COMM_NULL"; static const char __pyx_k_COMM_SELF[] = "COMM_SELF"; static const char __pyx_k_COMPOSITE[] = "COMPOSITE"; static const char __pyx_k_DETERMINE[] = "DETERMINE"; static const char __pyx_k_DIFFERENT[] = "DIFFERENT"; static const char __pyx_k_EISENSTAT[] = "EISENSTAT"; static const char __pyx_k_ELEMENTAL[] = "ELEMENTAL"; static const char __pyx_k_FROBENIUS[] = "FROBENIUS"; static const char __pyx_k_FULL_SIZE[] = "FULL_SIZE"; static const char __pyx_k_GLMapType[] = "GLMapType"; static const char __pyx_k_HALF_SIZE[] = "HALF_SIZE"; static const char __pyx_k_HERMITIAN[] = "HERMITIAN"; static const char __pyx_k_INSERT_BC[] = "INSERT_BC"; static const char __pyx_k_ITERATING[] = "ITERATING"; static const char __pyx_k_MATCHSTEP[] = "MATCHSTEP"; static const char __pyx_k_MPIAIJCRL[] = "MPIAIJCRL"; static const char __pyx_k_MPISBSTRM[] = "MPISBSTRM"; static const char __pyx_k_MatOption[] = "MatOption"; static const char __pyx_k_NINFINITY[] = "NINFINITY"; static const char __pyx_k_NONLINEAR[] = "NONLINEAR"; static const char __pyx_k_NORM_NONE[] = "NORM_NONE"; static const char __pyx_k_PCASMType[] = "PCASMType"; static const char __pyx_k_PINFINITY[] = "PINFINITY"; static const char __pyx_k_REDUNDANT[] = "REDUNDANT"; static const char __pyx_k_ROWLENGTH[] = "ROWLENGTH"; static const char __pyx_k_SEQAIJCRL[] = "SEQAIJCRL"; static const char __pyx_k_SEQSBSTRM[] = "SEQSBSTRM"; static const char __pyx_k_SUBMATRIX[] = "SUBMATRIX"; static const char __pyx_k_SUBSET_NZ[] = "SUBSET_NZ"; static const char __pyx_k_SYMMETRIC[] = "SYMMETRIC"; static const char __pyx_k_Structure[] = "Structure"; static const char __pyx_k_TELESCOPE[] = "TELESCOPE"; static const char __pyx_k_TypeError[] = "TypeError"; static const char __pyx_k_VecOption[] = "VecOption"; static const char __pyx_k_col_bsize[] = "col_bsize"; static const char __pyx_k_conePoint[] = "conePoint"; static const char __pyx_k_converged[] = "converged"; static const char __pyx_k_createMat[] = "createMat"; static const char __pyx_k_duplicate[] = "duplicate"; static const char __pyx_k_elem_type[] = "elem_type"; static const char __pyx_k_end_kargs[] = "end_kargs"; static const char __pyx_k_enumerate[] = "enumerate"; static const char __pyx_k_fieldName[] = "fieldName"; static const char __pyx_k_getActive[] = "getActive"; static const char __pyx_k_getAppCtx[] = "getAppCtx"; static const char __pyx_k_getBuffer[] = "getBuffer"; static const char __pyx_k_getMatrix[] = "getMatrix"; static const char __pyx_k_getNumber[] = "getNumber"; static const char __pyx_k_getPCSide[] = "getPCSide"; static const char __pyx_k_getRanges[] = "getRanges"; static const char __pyx_k_getString[] = "getString"; static const char __pyx_k_globalsec[] = "globalsec"; static const char __pyx_k_hypretype[] = "hypretype"; static const char __pyx_k_infoAllow[] = "infoAllow"; static const char __pyx_k_max_fails[] = "max_fails"; static const char __pyx_k_max_funcs[] = "max_funcs"; static const char __pyx_k_max_steps[] = "max_steps"; static const char __pyx_k_metaclass[] = "__metaclass__"; static const char __pyx_k_nonzero_2[] = "__nonzero__"; static const char __pyx_k_norm_type[] = "norm_type"; static const char __pyx_k_normsched[] = "normsched"; static const char __pyx_k_numFields[] = "numFields"; static const char __pyx_k_objective[] = "objective"; static const char __pyx_k_operators[] = "operators"; static const char __pyx_k_part_type[] = "part_type"; static const char __pyx_k_row_bsize[] = "row_bsize"; static const char __pyx_k_separable[] = "separable"; static const char __pyx_k_setActive[] = "setActive"; static const char __pyx_k_setAppCtx[] = "setAppCtx"; static const char __pyx_k_setPCSide[] = "setPCSide"; static const char __pyx_k_shifttype[] = "shifttype"; static const char __pyx_k_snes_type[] = "snes_type"; static const char __pyx_k_structure[] = "structure"; static const char __pyx_k_symmetric[] = "symmetric"; static const char __pyx_k_syncFlush[] = "syncFlush"; static const char __pyx_k_syncPrint[] = "syncPrint"; static const char __pyx_k_threshold[] = "threshold"; static const char __pyx_k_time_step[] = "time_step"; static const char __pyx_k_traceback[] = "_traceback_"; static const char __pyx_k_transpose[] = "transpose"; static const char __pyx_k_varbounds[] = "varbounds"; static const char __pyx_k_zeropivot[] = "zeropivot"; static const char __pyx_k_ADD_VALUES[] = "ADD_VALUES"; static const char __pyx_k_ASCII_IMPL[] = "ASCII_IMPL"; static const char __pyx_k_ASCII_INFO[] = "ASCII_INFO"; static const char __pyx_k_COMM_WORLD[] = "COMM_WORLD"; static const char __pyx_k_DRAW_BASIC[] = "DRAW_BASIC"; static const char __pyx_k_DRAW_PORTS[] = "DRAW_PORTS"; static const char __pyx_k_FIELDSPLIT[] = "FIELDSPLIT"; static const char __pyx_k_FINAL_ONLY[] = "FINAL_ONLY"; static const char __pyx_k_GLOBAL_MAX[] = "GLOBAL_MAX"; static const char __pyx_k_GLOBAL_SUM[] = "GLOBAL_SUM"; static const char __pyx_k_INSERT_ALL[] = "INSERT_ALL"; static const char __pyx_k_InsertMode[] = "InsertMode"; static const char __pyx_k_MAX_VALUES[] = "MAX_VALUES"; static const char __pyx_k_MPIAIJCUSP[] = "MPIAIJCUSP"; static const char __pyx_k_MPIAIJPERM[] = "MPIAIJPERM"; static const char __pyx_k_MatSORType[] = "MatSORType"; static const char __pyx_k_PCGAMGType[] = "PCGAMGType"; static const char __pyx_k_PCGASMType[] = "PCGASMType"; static const char __pyx_k_PIPEFGMRES[] = "PIPEFGMRES"; static const char __pyx_k_RICHARDSON[] = "RICHARDSON"; static const char __pyx_k_RandomType[] = "RandomType"; static const char __pyx_k_SACUSPPOLY[] = "SACUSPPOLY"; static const char __pyx_k_SEQAIJCUSP[] = "SEQAIJCUSP"; static const char __pyx_k_SEQAIJPERM[] = "SEQAIJPERM"; static const char __pyx_k_ScalarType[] = "ScalarType"; static const char __pyx_k_THIRD_SIZE[] = "THIRD_SIZE"; static const char __pyx_k_USE_INODES[] = "USE_INODES"; static const char __pyx_k_ValueError[] = "ValueError"; static const char __pyx_k_ViewerType[] = "ViewerType"; static const char __pyx_k_assemblies[] = "assemblies"; static const char __pyx_k_authorinfo[] = "authorinfo"; static const char __pyx_k_begin_args[] = "begin_args"; static const char __pyx_k_block_size[] = "block_size"; static const char __pyx_k_compressed[] = "compressed"; static const char __pyx_k_createVecs[] = "createVecs"; static const char __pyx_k_empty_name[] = "empty name"; static const char __pyx_k_errhandler[] = "errhandler"; static const char __pyx_k_getCPUTime[] = "getCPUTime"; static const char __pyx_k_getClassId[] = "getClassId"; static const char __pyx_k_getCorners[] = "getCorners"; static const char __pyx_k_getIndices[] = "getIndices"; static const char __pyx_k_getMaxTime[] = "getMaxTime"; static const char __pyx_k_getStencil[] = "getStencil"; static const char __pyx_k_getVecLeft[] = "getVecLeft"; static const char __pyx_k_getVersion[] = "getVersion"; static const char __pyx_k_getVisible[] = "getVisible"; static const char __pyx_k_initialize[] = "_initialize"; static const char __pyx_k_isIdentity[] = "isIdentity"; static const char __pyx_k_linear_its[] = "linear_its"; static const char __pyx_k_mpi4py_MPI[] = "mpi4py.MPI"; static const char __pyx_k_proc_sizes[] = "proc_sizes"; static const char __pyx_k_pyx_vtable[] = "__pyx_vtable__"; static const char __pyx_k_reciprocal[] = "reciprocal"; static const char __pyx_k_setMaxTime[] = "setMaxTime"; static const char __pyx_k_setVisible[] = "setVisible"; static const char __pyx_k_shift_type[] = "shift_type"; static const char __pyx_k_startswith[] = "startswith"; static const char __pyx_k_useClosure[] = "useClosure"; static const char __pyx_k_AIJCUSPARSE[] = "AIJCUSPARSE"; static const char __pyx_k_AIJVIENNACL[] = "AIJVIENNACL"; static const char __pyx_k_APPLY_LOWER[] = "APPLY_LOWER"; static const char __pyx_k_APPLY_UPPER[] = "APPLY_UPPER"; static const char __pyx_k_ASCII_DENSE[] = "ASCII_DENSE"; static const char __pyx_k_ASCII_INDEX[] = "ASCII_INDEX"; static const char __pyx_k_ASCII_LATEX[] = "ASCII_LATEX"; static const char __pyx_k_ASCII_PCICE[] = "ASCII_PCICE"; static const char __pyx_k_ComplexType[] = "ComplexType"; static const char __pyx_k_ElementType[] = "ElementType"; static const char __pyx_k_Error___str[] = "Error.__str__"; static const char __pyx_k_HYPRESTRUCT[] = "HYPRESTRUCT"; static const char __pyx_k_INTERPOLATE[] = "INTERPOLATE"; static const char __pyx_k_KSPNormType[] = "KSPNormType"; static const char __pyx_k_MATHEMATICA[] = "MATHEMATICA"; static const char __pyx_k_MPIVIENNACL[] = "MPIVIENNACL"; static const char __pyx_k_MatInfoType[] = "MatInfoType"; static const char __pyx_k_MemoryError[] = "MemoryError"; static const char __pyx_k_NORM_ALWAYS[] = "NORM_ALWAYS"; static const char __pyx_k_NRICHARDSON[] = "NRICHARDSON"; static const char __pyx_k_ProblemType[] = "ProblemType"; static const char __pyx_k_RUNGE_KUTTA[] = "RUNGE_KUTTA"; static const char __pyx_k_SEQVIENNACL[] = "SEQVIENNACL"; static const char __pyx_k_ScatterMode[] = "ScatterMode"; static const char __pyx_k_StencilType[] = "StencilType"; static const char __pyx_k_SystemError[] = "SystemError"; static const char __pyx_k_UNSPECIFIED[] = "UNSPECIFIED"; static const char __pyx_k_begin_kargs[] = "begin_kargs"; static const char __pyx_k_constraints[] = "constraints"; static const char __pyx_k_coordinates[] = "coordinates"; static const char __pyx_k_createLabel[] = "createLabel"; static const char __pyx_k_create_gvec[] = "create_gvec"; static const char __pyx_k_create_lvec[] = "create_lvec"; static const char __pyx_k_getGradient[] = "getGradient"; static const char __pyx_k_getInterval[] = "getInterval"; static const char __pyx_k_getMaxSteps[] = "getMaxSteps"; static const char __pyx_k_getNormType[] = "getNormType"; static const char __pyx_k_getNumberDM[] = "getNumberDM"; static const char __pyx_k_getRefCount[] = "getRefCount"; static const char __pyx_k_getSolution[] = "getSolution"; static const char __pyx_k_getTimeStep[] = "getTimeStep"; static const char __pyx_k_getVecRight[] = "getVecRight"; static const char __pyx_k_hasLagrange[] = "hasLagrange"; static const char __pyx_k_interp_type[] = "interp_type"; static const char __pyx_k_interpolate[] = "interpolate"; static const char __pyx_k_isAssembled[] = "isAssembled"; static const char __pyx_k_isFinalized[] = "isFinalized"; static const char __pyx_k_isHermitian[] = "isHermitian"; static const char __pyx_k_isSymmetric[] = "isSymmetric"; static const char __pyx_k_numMessages[] = "numMessages"; static const char __pyx_k_nz_unneeded[] = "nz_unneeded"; static const char __pyx_k_orientation[] = "orientation"; static const char __pyx_k_setDiagonal[] = "setDiagonal"; static const char __pyx_k_setInterval[] = "setInterval"; static const char __pyx_k_setMaxSteps[] = "setMaxSteps"; static const char __pyx_k_setNormType[] = "setNormType"; static const char __pyx_k_setParamsEW[] = "setParamsEW"; static const char __pyx_k_setTimeStep[] = "setTimeStep"; static const char __pyx_k_shiftamount[] = "shiftamount"; static const char __pyx_k_step_number[] = "step_number"; static const char __pyx_k_traceback_2[] = "traceback"; static const char __pyx_k_ASCII_COMMON[] = "ASCII_COMMON"; static const char __pyx_k_ASCII_MATLAB[] = "ASCII_MATLAB"; static const char __pyx_k_ASCII_PYTHON[] = "ASCII_PYTHON"; static const char __pyx_k_AssemblyType[] = "AssemblyType"; static const char __pyx_k_BICGSTABCUSP[] = "BICGSTABCUSP"; static const char __pyx_k_BoundaryType[] = "BoundaryType"; static const char __pyx_k_DIFFERENT_NZ[] = "DIFFERENT_NZ"; static const char __pyx_k_DIVERGED_NAN[] = "DIVERGED_NAN"; static const char __pyx_k_DRAW_CONTOUR[] = "DRAW_CONTOUR"; static const char __pyx_k_EquationType[] = "EquationType"; static const char __pyx_k_Error___init[] = "Error.__init__"; static const char __pyx_k_Error___repr[] = "Error.__repr__"; static const char __pyx_k_HYPRESSTRUCT[] = "HYPRESSTRUCT"; static const char __pyx_k_INITIAL_ONLY[] = "INITIAL_ONLY"; static const char __pyx_k_MatStructure[] = "MatStructure"; static const char __pyx_k_NORM_1_AND_2[] = "NORM_1_AND_2"; static const char __pyx_k_NORM_DEFAULT[] = "NORM_DEFAULT"; static const char __pyx_k_NORM_NATURAL[] = "NORM_NATURAL"; static const char __pyx_k_NormSchedule[] = "NormSchedule"; static const char __pyx_k_ODE_EXPLICIT[] = "ODE_EXPLICIT"; static const char __pyx_k_ODE_IMPLICIT[] = "ODE_IMPLICIT"; static const char __pyx_k_OrderingType[] = "OrderingType"; static const char __pyx_k_PREALLOCATOR[] = "PREALLOCATOR"; static const char __pyx_k_QUARTER_SIZE[] = "QUARTER_SIZE"; static const char __pyx_k_REDISTRIBUTE[] = "REDISTRIBUTE"; static const char __pyx_k_ROW_ORIENTED[] = "ROW_ORIENTED"; static const char __pyx_k_RuntimeError[] = "RuntimeError"; static const char __pyx_k_SchurPreType[] = "SchurPreType"; static const char __pyx_k_TRANSPOSEMAT[] = "TRANSPOSEMAT"; static const char __pyx_k_VINEWTONRSLS[] = "VINEWTONRSLS"; static const char __pyx_k_VINEWTONSSLS[] = "VINEWTONSSLS"; static const char __pyx_k_ViewerFormat[] = "ViewerFormat"; static const char __pyx_k_createMatrix[] = "createMatrix"; static const char __pyx_k_create_subdm[] = "create_subdm"; static const char __pyx_k_error_code_d[] = "error code %d"; static const char __pyx_k_getActiveAll[] = "getActiveAll"; static const char __pyx_k_getBlockInfo[] = "getBlockInfo"; static const char __pyx_k_getBlockSize[] = "getBlockSize"; static const char __pyx_k_getClassName[] = "getClassName"; static const char __pyx_k_getDimension[] = "getDimension"; static const char __pyx_k_getLocalSize[] = "getLocalSize"; static const char __pyx_k_getOperators[] = "getOperators"; static const char __pyx_k_getProcSizes[] = "getProcSizes"; static const char __pyx_k_initial_time[] = "initial_time"; static const char __pyx_k_initialguess[] = "initialguess"; static const char __pyx_k_nz_allocated[] = "nz_allocated"; static const char __pyx_k_setActiveAll[] = "setActiveAll"; static const char __pyx_k_setDimension[] = "setDimension"; static const char __pyx_k_stencil_type[] = "stencil_type"; static const char __pyx_k_ADD_BC_VALUES[] = "ADD_BC_VALUES"; static const char __pyx_k_APPEND_UPDATE[] = "APPEND_UPDATE"; static const char __pyx_k_ASCII_SYMMODU[] = "ASCII_SYMMODU"; static const char __pyx_k_BINARY_MATLAB[] = "BINARY_MATLAB"; static const char __pyx_k_CONVERGED_ITS[] = "CONVERGED_ITS"; static const char __pyx_k_CompositeType[] = "CompositeType"; static const char __pyx_k_DIVERGED_DTOL[] = "DIVERGED_DTOL"; static const char __pyx_k_DIVERGED_NULL[] = "DIVERGED_NULL"; static const char __pyx_k_DIVERGED_USER[] = "DIVERGED_USER"; static const char __pyx_k_FORWARD_LOCAL[] = "FORWARD_LOCAL"; static const char __pyx_k_FORWARD_SWEEP[] = "FORWARD_SWEEP"; static const char __pyx_k_INSERT_VALUES[] = "INSERT_VALUES"; static const char __pyx_k_NEW_DIAGONALS[] = "NEW_DIAGONALS"; static const char __pyx_k_NORM_INFINITY[] = "NORM_INFINITY"; static const char __pyx_k_PETSc_Error_d[] = "PETSc.Error(%d)"; static const char __pyx_k_REVERSE_LOCAL[] = "REVERSE_LOCAL"; static const char __pyx_k_SCATTER_LOCAL[] = "SCATTER_LOCAL"; static const char __pyx_k_SchurFactType[] = "SchurFactType"; static const char __pyx_k_TSProblemType[] = "TSProblemType"; static const char __pyx_k_boundary_type[] = "boundary_type"; static const char __pyx_k_createVecLeft[] = "createVecLeft"; static const char __pyx_k_create_matrix[] = "create_matrix"; static const char __pyx_k_diagonalScale[] = "diagonalScale"; static const char __pyx_k_diagonal_fill[] = "diagonal_fill"; static const char __pyx_k_getBlockSizes[] = "getBlockSizes"; static const char __pyx_k_getStepNumber[] = "getStepNumber"; static const char __pyx_k_getTolerances[] = "getTolerances"; static const char __pyx_k_isInitialized[] = "isInitialized"; static const char __pyx_k_isPermutation[] = "isPermutation"; static const char __pyx_k_messageLength[] = "messageLength"; static const char __pyx_k_numReductions[] = "numReductions"; static const char __pyx_k_s_line_d_in_s[] = "%s() line %d in %s"; static const char __pyx_k_setStepNumber[] = "setStepNumber"; static const char __pyx_k_setTolerances[] = "setTolerances"; static const char __pyx_k_stencil_width[] = "stencil_width"; static const char __pyx_k_type_registry[] = "__type_registry__"; static const char __pyx_k_ADD_ALL_VALUES[] = "ADD_ALL_VALUES"; static const char __pyx_k_ASCII_VTK_CELL[] = "ASCII_VTK_CELL"; static const char __pyx_k_AttributeError[] = "AttributeError"; static const char __pyx_k_BACKWARD_SWEEP[] = "BACKWARD_SWEEP"; static const char __pyx_k_CONVERGED_ATOL[] = "CONVERGED_ATOL"; static const char __pyx_k_CONVERGED_MINF[] = "CONVERGED_MINF"; static const char __pyx_k_CONVERGED_RTOL[] = "CONVERGED_RTOL"; static const char __pyx_k_CONVERGED_TIME[] = "CONVERGED_TIME"; static const char __pyx_k_CONVERGED_USER[] = "CONVERGED_USER"; static const char __pyx_k_CRANK_NICOLSON[] = "CRANK_NICOLSON"; static const char __pyx_k_DIVERGED_INNER[] = "DIVERGED_INNER"; static const char __pyx_k_DMBoundaryType[] = "DMBoundaryType"; static const char __pyx_k_ExactFinalTime[] = "ExactFinalTime"; static const char __pyx_k_FINAL_ASSEMBLY[] = "FINAL_ASSEMBLY"; static const char __pyx_k_FLUSH_ASSEMBLY[] = "FLUSH_ASSEMBLY"; static const char __pyx_k_MEMORYSCALABLE[] = "MEMORYSCALABLE"; static const char __pyx_k_MPIAIJCUSPARSE[] = "MPIAIJCUSPARSE"; static const char __pyx_k_MPIAIJVIENNACL[] = "MPIAIJVIENNACL"; static const char __pyx_k_MULTIPLICATIVE[] = "MULTIPLICATIVE"; static const char __pyx_k_NORM_FROBENIUS[] = "NORM_FROBENIUS"; static const char __pyx_k_NOT_SET_VALUES[] = "NOT_SET_VALUES"; static const char __pyx_k_NotImplemented[] = "NotImplemented"; static const char __pyx_k_PRECONDITIONED[] = "PRECONDITIONED"; static const char __pyx_k_SEQAIJCUSPARSE[] = "SEQAIJCUSPARSE"; static const char __pyx_k_SEQAIJVIENNACL[] = "SEQAIJVIENNACL"; static const char __pyx_k_SYMMETRY_SWEEP[] = "SYMMETRY_SWEEP"; static const char __pyx_k_TSEquationType[] = "TSEquationType"; static const char __pyx_k_USE_HASH_TABLE[] = "USE_HASH_TABLE"; static const char __pyx_k_createLocalVec[] = "createLocalVec"; static const char __pyx_k_createVecRight[] = "createVecRight"; static const char __pyx_k_empty_citation[] = "empty citation"; static const char __pyx_k_factor_mallocs[] = "factor_mallocs"; static const char __pyx_k_getDefaultComm[] = "getDefaultComm"; static const char __pyx_k_getGhostRanges[] = "getGhostRanges"; static const char __pyx_k_getKSPFailures[] = "getKSPFailures"; static const char __pyx_k_getProblemType[] = "getProblemType"; static const char __pyx_k_getStencilType[] = "getStencilType"; static const char __pyx_k_getVersionInfo[] = "getVersionInfo"; static const char __pyx_k_jacobian_state[] = "jacobian_state"; static const char __pyx_k_petsc4py_PETSc[] = "petsc4py.PETSc"; static const char __pyx_k_setDefaultComm[] = "setDefaultComm"; static const char __pyx_k_setProblemType[] = "setProblemType"; static const char __pyx_k_splitOwnership[] = "splitOwnership"; static const char __pyx_k_CONVERGED_EVENT[] = "CONVERGED_EVENT"; static const char __pyx_k_CONVERGED_GATOL[] = "CONVERGED_GATOL"; static const char __pyx_k_CONVERGED_GRTOL[] = "CONVERGED_GRTOL"; static const char __pyx_k_CONVERGED_GTTOL[] = "CONVERGED_GTTOL"; static const char __pyx_k_ConvergedReason[] = "ConvergedReason"; static const char __pyx_k_DIVERGED_MAXFCN[] = "DIVERGED_MAXFCN"; static const char __pyx_k_DIVERGED_MAXITS[] = "DIVERGED_MAXITS"; static const char __pyx_k_DIVERGED_MAX_IT[] = "DIVERGED_MAX_IT"; static const char __pyx_k_DMDAElementType[] = "DMDAElementType"; static const char __pyx_k_DMDAStencilType[] = "DMDAStencilType"; static const char __pyx_k_Error___nonzero[] = "Error.__nonzero__"; static const char __pyx_k_FactorShiftType[] = "FactorShiftType"; static const char __pyx_k_MatAssemblyType[] = "MatAssemblyType"; static const char __pyx_k_MatOrderingType[] = "MatOrderingType"; static const char __pyx_k_NORMALHERMITIAN[] = "NORMALHERMITIAN"; static const char __pyx_k_NORM_FINAL_ONLY[] = "NORM_FINAL_ONLY"; static const char __pyx_k_PCCompositeType[] = "PCCompositeType"; static const char __pyx_k_PartitionerType[] = "PartitionerType"; static const char __pyx_k_SCATTER_FORWARD[] = "SCATTER_FORWARD"; static const char __pyx_k_SCATTER_REVERSE[] = "SCATTER_REVERSE"; static const char __pyx_k_SCHURCOMPLEMENT[] = "SCHURCOMPLEMENT"; static const char __pyx_k_array_interface[] = "__array_interface__"; static const char __pyx_k_coneOrientation[] = "coneOrientation"; static const char __pyx_k_createGlobalVec[] = "createGlobalVec"; static const char __pyx_k_getBlockIndices[] = "getBlockIndices"; static const char __pyx_k_getBoundaryType[] = "getBoundaryType"; static const char __pyx_k_getEquationType[] = "getEquationType"; static const char __pyx_k_getGhostCorners[] = "getGhostCorners"; static const char __pyx_k_getResidualNorm[] = "getResidualNorm"; static const char __pyx_k_getSolutionNorm[] = "getSolutionNorm"; static const char __pyx_k_getStencilWidth[] = "getStencilWidth"; static const char __pyx_k_getStepFailures[] = "getStepFailures"; static const char __pyx_k_jacobian_design[] = "jacobian_design"; static const char __pyx_k_popErrorHandler[] = "popErrorHandler"; static const char __pyx_k_prefix_s_name_s[] = "(prefix:%s, name:%s)"; static const char __pyx_k_refinementLimit[] = "refinementLimit"; static const char __pyx_k_setEquationType[] = "setEquationType"; static const char __pyx_k_setResidualNorm[] = "setResidualNorm"; static const char __pyx_k_ASCII_VTK_COORDS[] = "ASCII_VTK_COORDS"; static const char __pyx_k_INSERT_BC_VALUES[] = "INSERT_BC_VALUES"; static const char __pyx_k_SNESNormSchedule[] = "SNESNormSchedule"; static const char __pyx_k_SYMMETRY_ETERNAL[] = "SYMMETRY_ETERNAL"; static const char __pyx_k_TAO_Solver_Types[] = "\n TAO Solver Types\n "; static const char __pyx_k_TSExactFinalTime[] = "TSExactFinalTime"; static const char __pyx_k_UNPRECONDITIONED[] = "UNPRECONDITIONED"; static const char __pyx_k_createNaturalVec[] = "createNaturalVec"; static const char __pyx_k_create_injection[] = "create_injection"; static const char __pyx_k_fill_ratio_given[] = "fill_ratio_given"; static const char __pyx_k_getFunctionValue[] = "getFunctionValue"; static const char __pyx_k_getOptionsPrefix[] = "getOptionsPrefix"; static const char __pyx_k_ownership_ranges[] = "ownership_ranges"; static const char __pyx_k_pushErrorHandler[] = "pushErrorHandler"; static const char __pyx_k_registerCitation[] = "registerCitation"; static const char __pyx_k_setOptionsPrefix[] = "setOptionsPrefix"; static const char __pyx_k_ASCII_FACTOR_INFO[] = "ASCII_FACTOR_INFO"; static const char __pyx_k_ASCII_INFO_DETAIL[] = "ASCII_INFO_DETAIL"; static const char __pyx_k_ASCII_MATHEMATICA[] = "ASCII_MATHEMATICA"; static const char __pyx_k_CONVERGED_STEPTOL[] = "CONVERGED_STEPTOL"; static const char __pyx_k_DIVERGED_NANORINF[] = "DIVERGED_NANORINF"; static const char __pyx_k_INSERT_ALL_VALUES[] = "INSERT_ALL_VALUES"; static const char __pyx_k_InterpolationType[] = "InterpolationType"; static const char __pyx_k_NORM_INITIAL_ONLY[] = "NORM_INITIAL_ONLY"; static const char __pyx_k_POSITIVE_DEFINITE[] = "POSITIVE_DEFINITE"; static const char __pyx_k_TSConvergedReason[] = "TSConvergedReason"; static const char __pyx_k_createLocalVector[] = "createLocalVector"; static const char __pyx_k_fill_ratio_needed[] = "fill_ratio_needed"; static const char __pyx_k_getMaxKSPFailures[] = "getMaxKSPFailures"; static const char __pyx_k_getObjectiveValue[] = "getObjectiveValue"; static const char __pyx_k_getOwnershipRange[] = "getOwnershipRange"; static const char __pyx_k_getSolutionUpdate[] = "getSolutionUpdate"; static const char __pyx_k_initial_time_step[] = "initial_time_step"; static const char __pyx_k_null_communicator[] = "null communicator"; static const char __pyx_k_positive_definite[] = "positive_definite"; static const char __pyx_k_refinementUniform[] = "refinementUniform"; static const char __pyx_k_setMaxKSPFailures[] = "setMaxKSPFailures"; static const char __pyx_k_unknown_options_s[] = "unknown options: %s"; static const char __pyx_k_ASCII_MATRIXMARKET[] = "ASCII_MATRIXMARKET"; static const char __pyx_k_CONTINUE_ITERATING[] = "CONTINUE_ITERATING"; static const char __pyx_k_CONVERGED_TR_DELTA[] = "CONVERGED_TR_DELTA"; static const char __pyx_k_DIVERGED_BREAKDOWN[] = "DIVERGED_BREAKDOWN"; static const char __pyx_k_DIVERGED_FNORM_NAN[] = "DIVERGED_FNORM_NAN"; static const char __pyx_k_DIVERGED_LOCAL_MIN[] = "DIVERGED_LOCAL_MIN"; static const char __pyx_k_INITIAL_FINAL_ONLY[] = "INITIAL_FINAL_ONLY"; static const char __pyx_k_KSPConvergedReason[] = "KSPConvergedReason"; static const char __pyx_k_MatFactorShiftType[] = "MatFactorShiftType"; static const char __pyx_k_TAOConvergedReason[] = "TAOConvergedReason"; static const char __pyx_k_ZERO_INITIAL_GUESS[] = "ZERO_INITIAL_GUESS"; static const char __pyx_k_block_size_not_set[] = "block size not set"; static const char __pyx_k_createGlobalVector[] = "createGlobalVector"; static const char __pyx_k_getConvergedReason[] = "getConvergedReason"; static const char __pyx_k_getIterationNumber[] = "getIterationNumber"; static const char __pyx_k_getMaxStepFailures[] = "getMaxStepFailures"; static const char __pyx_k_getOwnershipRanges[] = "getOwnershipRanges"; static const char __pyx_k_readonly_attribute[] = "readonly attribute"; static const char __pyx_k_setConvergedReason[] = "setConvergedReason"; static const char __pyx_k_setIterationNumber[] = "setIterationNumber"; static const char __pyx_k_setMaxStepFailures[] = "setMaxStepFailures"; static const char __pyx_k_CONVERGED_FNORM_ABS[] = "CONVERGED_FNORM_ABS"; static const char __pyx_k_CONVERGED_ITERATING[] = "CONVERGED_ITERATING"; static const char __pyx_k_DAE_IMPLICIT_INDEX1[] = "DAE_IMPLICIT_INDEX1"; static const char __pyx_k_DAE_IMPLICIT_INDEX2[] = "DAE_IMPLICIT_INDEX2"; static const char __pyx_k_DAE_IMPLICIT_INDEX3[] = "DAE_IMPLICIT_INDEX3"; static const char __pyx_k_DIVERGED_LS_FAILURE[] = "DIVERGED_LS_FAILURE"; static const char __pyx_k_IGNORE_ZERO_ENTRIES[] = "IGNORE_ZERO_ENTRIES"; static const char __pyx_k_I_0_is_d_expected_d[] = "I[0] is %d, expected %d"; static const char __pyx_k_LOCAL_FORWARD_SWEEP[] = "LOCAL_FORWARD_SWEEP"; static const char __pyx_k_NORM_PRECONDITIONED[] = "NORM_PRECONDITIONED"; static const char __pyx_k_NO_OFF_PROC_ENTRIES[] = "NO_OFF_PROC_ENTRIES"; static const char __pyx_k_NotImplementedError[] = "NotImplementedError"; static const char __pyx_k_SNESConvergedReason[] = "SNESConvergedReason"; static const char __pyx_k_createNaturalVector[] = "createNaturalVector"; static const char __pyx_k_DAE_IMPLICIT_INDEXHI[] = "DAE_IMPLICIT_INDEXHI"; static const char __pyx_k_DIVERGED_LINE_SEARCH[] = "DIVERGED_LINE_SEARCH"; static const char __pyx_k_ExactFinalTimeOption[] = "ExactFinalTimeOption"; static const char __pyx_k_KEEP_NONZERO_PATTERN[] = "KEEP_NONZERO_PATTERN"; static const char __pyx_k_LOCAL_BACKWARD_SWEEP[] = "LOCAL_BACKWARD_SWEEP"; static const char __pyx_k_SAME_NONZERO_PATTERN[] = "SAME_NONZERO_PATTERN"; static const char __pyx_k_create_interpolation[] = "create_interpolation"; static const char __pyx_k_getInitialGuessKnoll[] = "getInitialGuessKnoll"; static const char __pyx_k_setInitialGuessKnoll[] = "setInitialGuessKnoll"; static const char __pyx_k_unknown_shift_type_s[] = "unknown shift type: %s"; static const char __pyx_k_CONVERGED_ATOL_NORMAL[] = "CONVERGED_ATOL_NORMAL"; static const char __pyx_k_CONVERGED_RTOL_NORMAL[] = "CONVERGED_RTOL_NORMAL"; static const char __pyx_k_CONVERGED_STEP_LENGTH[] = "CONVERGED_STEP_LENGTH"; static const char __pyx_k_DIVERGED_NONSYMMETRIC[] = "DIVERGED_NONSYMMETRIC"; static const char __pyx_k_DIVERGED_TR_REDUCTION[] = "DIVERGED_TR_REDUCTION"; static const char __pyx_k_DMDAInterpolationType[] = "DMDAInterpolationType"; static const char __pyx_k_LOCAL_SYMMETRIC_SWEEP[] = "LOCAL_SYMMETRIC_SWEEP"; static const char __pyx_k_NEW_NONZERO_LOCATIONS[] = "NEW_NONZERO_LOCATIONS"; static const char __pyx_k_NORM_UNPRECONDITIONED[] = "NORM_UNPRECONDITIONED"; static const char __pyx_k_NO_OFF_PROC_ZERO_ROWS[] = "NO_OFF_PROC_ZERO_ROWS"; static const char __pyx_k_SCATTER_FORWARD_LOCAL[] = "SCATTER_FORWARD_LOCAL"; static const char __pyx_k_SCATTER_REVERSE_LOCAL[] = "SCATTER_REVERSE_LOCAL"; static const char __pyx_k_getConvergenceHistory[] = "getConvergenceHistory"; static const char __pyx_k_getFunctionTolerances[] = "getFunctionTolerances"; static const char __pyx_k_getGradientTolerances[] = "getGradientTolerances"; static const char __pyx_k_setFunctionTolerances[] = "setFunctionTolerances"; static const char __pyx_k_side_r_not_understood[] = "side '%r' not understood"; static const char __pyx_k_CONVERGED_CG_NEG_CURVE[] = "CONVERGED_CG_NEG_CURVE"; static const char __pyx_k_DIVERGED_INDEFINITE_PC[] = "DIVERGED_INDEFINITE_PC"; static const char __pyx_k_DIVERGED_STEP_REJECTED[] = "DIVERGED_STEP_REJECTED"; static const char __pyx_k_ERROR_LOWER_TRIANGULAR[] = "ERROR_LOWER_TRIANGULAR"; static const char __pyx_k_GETROW_UPPERTRIANGULAR[] = "GETROW_UPPERTRIANGULAR"; static const char __pyx_k_Object_is_not_writable[] = "Object is not writable."; static const char __pyx_k_STRUCTURALLY_SYMMETRIC[] = "STRUCTURALLY_SYMMETRIC"; static const char __pyx_k_SUBSET_NONZERO_PATTERN[] = "SUBSET_NONZERO_PATTERN"; static const char __pyx_k_communicator_not_owned[] = "communicator not owned"; static const char __pyx_k_getInitialGuessNonzero[] = "getInitialGuessNonzero"; static const char __pyx_k_getLinearSolveFailures[] = "getLinearSolveFailures"; static const char __pyx_k_setInitialGuessNonzero[] = "setInitialGuessNonzero"; static const char __pyx_k_size_I_is_d_expected_d[] = "size(I) is %d, expected %d"; static const char __pyx_k_size_J_is_d_expected_d[] = "size(J) is %d, expected %d"; static const char __pyx_k_size_V_is_d_expected_d[] = "size(V) is %d, expected %d"; static const char __pyx_k_unknown_element_type_s[] = "unknown element type: %s"; static const char __pyx_k_unknown_scatter_mode_s[] = "unknown scatter mode: %s"; static const char __pyx_k_unknown_stencil_type_s[] = "unknown stencil type: %s"; static const char __pyx_k_DIVERGED_BREAKDOWN_BICG[] = "DIVERGED_BREAKDOWN_BICG"; static const char __pyx_k_DIVERGED_FUNCTION_COUNT[] = "DIVERGED_FUNCTION_COUNT"; static const char __pyx_k_DIVERGED_INDEFINITE_MAT[] = "DIVERGED_INDEFINITE_MAT"; static const char __pyx_k_IGNORE_LOWER_TRIANGULAR[] = "IGNORE_LOWER_TRIANGULAR"; static const char __pyx_k_IGNORE_NEGATIVE_INDICES[] = "IGNORE_NEGATIVE_INDICES"; static const char __pyx_k_IGNORE_OFF_PROC_ENTRIES[] = "IGNORE_OFF_PROC_ENTRIES"; static const char __pyx_k_NORM_INITIAL_FINAL_ONLY[] = "NORM_INITIAL_FINAL_ONLY"; static const char __pyx_k_SUBSET_OFF_PROC_ENTRIES[] = "SUBSET_OFF_PROC_ENTRIES"; static const char __pyx_k_getConstraintTolerances[] = "getConstraintTolerances"; static const char __pyx_k_isStructurallySymmetric[] = "isStructurallySymmetric"; static const char __pyx_k_unknown_boundary_type_s[] = "unknown boundary type: %s"; static const char __pyx_k_unknown_error_handler_s[] = "unknown error handler: %s"; static const char __pyx_k_CONVERGED_CG_CONSTRAINED[] = "CONVERGED_CG_CONSTRAINED"; static const char __pyx_k_CONVERGED_FNORM_RELATIVE[] = "CONVERGED_FNORM_RELATIVE"; static const char __pyx_k_CONVERGED_SNORM_RELATIVE[] = "CONVERGED_SNORM_RELATIVE"; static const char __pyx_k_DAE_SEMI_EXPLICIT_INDEX1[] = "DAE_SEMI_EXPLICIT_INDEX1"; static const char __pyx_k_DAE_SEMI_EXPLICIT_INDEX2[] = "DAE_SEMI_EXPLICIT_INDEX2"; static const char __pyx_k_DAE_SEMI_EXPLICIT_INDEX3[] = "DAE_SEMI_EXPLICIT_INDEX3"; static const char __pyx_k_DIVERGED_FUNCTION_DOMAIN[] = "DIVERGED_FUNCTION_DOMAIN"; static const char __pyx_k_DIVERGED_NONLINEAR_SOLVE[] = "DIVERGED_NONLINEAR_SOLVE"; static const char __pyx_k_NEW_NONZERO_LOCATION_ERR[] = "NEW_NONZERO_LOCATION_ERR"; static const char __pyx_k_PCFieldSplitSchurPreType[] = "PCFieldSplitSchurPreType"; static const char __pyx_k_SYMMETRIC_MULTIPLICATIVE[] = "SYMMETRIC_MULTIPLICATIVE"; static const char __pyx_k_getNonlinearStepFailures[] = "getNonlinearStepFailures"; static const char __pyx_k_incompatible_array_sizes[] = "incompatible array sizes"; static const char __pyx_k_CONVERGED_HAPPY_BREAKDOWN[] = "CONVERGED_HAPPY_BREAKDOWN"; static const char __pyx_k_DAE_SEMI_EXPLICIT_INDEXHI[] = "DAE_SEMI_EXPLICIT_INDEXHI"; static const char __pyx_k_DIFFERENT_NONZERO_PATTERN[] = "DIFFERENT_NONZERO_PATTERN"; static const char __pyx_k_PCFieldSplitSchurFactType[] = "PCFieldSplitSchurFactType"; static const char __pyx_k_getMaxFunctionEvaluations[] = "getMaxFunctionEvaluations"; static const char __pyx_k_getMaxLinearSolveFailures[] = "getMaxLinearSolveFailures"; static const char __pyx_k_setMaxFunctionEvaluations[] = "setMaxFunctionEvaluations"; static const char __pyx_k_setMaxLinearSolveFailures[] = "setMaxLinearSolveFailures"; static const char __pyx_k_NEW_NONZERO_ALLOCATION_ERR[] = "NEW_NONZERO_ALLOCATION_ERR"; static const char __pyx_k_size_d_nnz_is_d_expected_d[] = "size(d_nnz) is %d, expected %d"; static const char __pyx_k_size_o_nnz_is_d_expected_d[] = "size(o_nnz) is %d, expected %d"; static const char __pyx_k_UNUSED_NONZERO_LOCATION_ERR[] = "UNUSED_NONZERO_LOCATION_ERR"; static const char __pyx_k_getMaxNonlinearStepFailures[] = "getMaxNonlinearStepFailures"; static const char __pyx_k_setMaxNonlinearStepFailures[] = "setMaxNonlinearStepFailures"; static const char __pyx_k_expecting_tuple_list_or_dict[] = "expecting tuple/list or dict"; static const char __pyx_k_option_prefix_must_be_string[] = "option prefix must be string"; static const char __pyx_k_unknown_interpolation_type_s[] = "unknown interpolation type: %s"; static const char __pyx_k_block_size_d_must_be_positive[] = "block size %d must be positive"; static const char __pyx_k_incompatible_array_sizes_nv_d[] = "incompatible array sizes: nv=%d"; static const char __pyx_k_TAO_Solver_Termination_Reasons[] = "\n TAO Solver Termination Reasons\n "; static const char __pyx_k_expecting_a_C_contiguous_array[] = "expecting a C-contiguous array"; static const char __pyx_k_A_matrix_with_d_rows_requires_a[] = "A matrix with %d rows requires a row pointer of length %d (given: %d)"; static const char __pyx_k_Invalid_mode_expected_rw_r_or_w[] = "Invalid mode: expected 'rw', 'r', or 'w'"; static const char __pyx_k_Portable_Extensible_Toolkit_for[] = "\nPortable, Extensible Toolkit for Scientific Computation\n"; static const char __pyx_k_bcPoints_is_a_required_argument[] = "bcPoints is a required argument"; static const char __pyx_k_cannot_place_input_array_size_d[] = "cannot place input array size %d, vector size %d"; static const char __pyx_k_home_devel_petsc4py_3_7_0_src_P[] = "/home/devel/petsc4py-3.7.0/src/PETSc/Error.pyx"; static const char __pyx_k_key_d_cannot_register_s_already[] = "key: %d, cannot register: %s, already registered: %s"; static const char __pyx_k_size_array_is_d_expected_dx_d_d[] = "size(array) is %d, expected %dx%d=%d"; static const char __pyx_k_Given_d_column_indices_but_d_non[] = "Given %d column indices but %d non-zero values"; static const char __pyx_k_Must_provide_as_many_communicato[] = "Must provide as many communicators as levels"; static const char __pyx_k_Must_provide_both_sizes_and_poin[] = "Must provide both sizes and points arrays"; static const char __pyx_k_Out_of_memory_Allocated_d_Used_b[] = "Out of memory. Allocated: %d, Used by process: %d"; static const char __pyx_k_Vector_local_size_d_is_not_compa[] = "Vector local size %d is not compatible with DMDA local sizes %s"; static const char __pyx_k_accessing_non_existent_buffer_se[] = "accessing non-existent buffer segment"; static const char __pyx_k_array_size_d_and_vector_local_si[] = "array size %d and vector local size %d block size %d"; static const char __pyx_k_array_size_d_incompatible_with_v[] = "array size %d incompatible with vector local size %d"; static const char __pyx_k_cell_indices_must_have_two_dimen[] = "cell indices must have two dimensions: cells.ndim=%d"; static const char __pyx_k_column_indices_must_have_two_dim[] = "column indices must have two dimensions: cols.ndim=%d"; static const char __pyx_k_coordinates_must_have_two_dimens[] = "coordinates must have two dimensions: coordinates.ndim=%d"; static const char __pyx_k_coords_vertices_must_have_two_di[] = "coords vertices must have two dimensions: coords.ndim=%d"; static const char __pyx_k_ghosts_size_d_array_size_d_and_v[] = "ghosts size %d, array size %d, and vector local size %d block size %d"; static const char __pyx_k_global_size_d_not_divisible_by_b[] = "global size %d not divisible by block size %d"; static const char __pyx_k_incompatible_array_sizes_ni_d_nj[] = "incompatible array sizes: ni=%d, nj=%d, nv=%d"; static const char __pyx_k_incompatible_array_sizes_ni_d_nv[] = "incompatible array sizes: ni=%d, nv=%d, bs=%d"; static const char __pyx_k_input_arrays_have_incompatible_s[] = "input arrays have incompatible shapes: rows.shape=%s, cols.shape=%s, vals.shape=%s"; static const char __pyx_k_local_and_global_sizes_cannot_be[] = "local and global sizes cannot be both 'DECIDE'"; static const char __pyx_k_local_size_d_not_divisible_by_bl[] = "local size %d not divisible by block size %d"; static const char __pyx_k_number_of_dimensions_d_and_numbe[] = "number of dimensions %d and number ownership ranges %d"; static const char __pyx_k_option_prefix_should_not_have_sp[] = "option prefix should not have spaces"; static const char __pyx_k_option_prefix_should_not_start_w[] = "option prefix should not start with a hypen"; static const char __pyx_k_ownership_range_size_d_and_numbe[] = "ownership range size %d and number or processors %d"; static const char __pyx_k_row_indices_must_have_two_dimens[] = "row indices must have two dimensions: rows.ndim=%d"; static const char __pyx_k_sizes_array_should_have_d_entrie[] = "sizes array should have %d entries (has %d)"; static const char __pyx_k_values_must_have_two_or_more_dim[] = "values must have two or more dimensions: vals.ndim=%d"; static const char __pyx_k_home_devel_petsc4py_3_7_0_src_P_2[] = "/home/devel/petsc4py-3.7.0/src/PETSc/PETSc.pyx"; static const char __pyx_k_incompatible_array_sizes_ni_d_nv_2[] = "incompatible array sizes: ni=%d, nv=%d"; static PyObject *__pyx_n_s_A; static PyObject *__pyx_n_s_A11; static PyObject *__pyx_n_s_ADD; static PyObject *__pyx_n_s_ADDITIVE; static PyObject *__pyx_n_s_ADD_ALL; static PyObject *__pyx_n_s_ADD_ALL_VALUES; static PyObject *__pyx_n_s_ADD_BC; static PyObject *__pyx_n_s_ADD_BC_VALUES; static PyObject *__pyx_n_s_ADD_VALUES; static PyObject *__pyx_n_s_ADVANCED; static PyObject *__pyx_n_s_AGG; static PyObject *__pyx_n_s_AIJ; static PyObject *__pyx_n_s_AIJCRL; static PyObject *__pyx_n_s_AIJCUSP; static PyObject *__pyx_n_s_AIJCUSPARSE; static PyObject *__pyx_n_s_AIJPERM; static PyObject *__pyx_n_s_AIJVIENNACL; static PyObject *__pyx_n_s_AINVCUSP; static PyObject *__pyx_n_s_ALPHA; static PyObject *__pyx_n_s_ALPHA2; static PyObject *__pyx_n_s_ALWAYS; static PyObject *__pyx_n_s_AMD; static PyObject *__pyx_n_s_ANDERSON; static PyObject *__pyx_n_s_AOType; static PyObject *__pyx_n_s_APPEND; static PyObject *__pyx_n_s_APPEND_UPDATE; static PyObject *__pyx_n_s_APPLY_LOWER; static PyObject *__pyx_n_s_APPLY_UPPER; static PyObject *__pyx_n_s_ARKIMEX; static PyObject *__pyx_n_s_ASCII; static PyObject *__pyx_n_s_ASCII_COMMON; static PyObject *__pyx_n_s_ASCII_DENSE; static PyObject *__pyx_n_s_ASCII_FACTOR_INFO; static PyObject *__pyx_n_s_ASCII_IMPL; static PyObject *__pyx_n_s_ASCII_INDEX; static PyObject *__pyx_n_s_ASCII_INFO; static PyObject *__pyx_n_s_ASCII_INFO_DETAIL; static PyObject *__pyx_n_s_ASCII_LATEX; static PyObject *__pyx_n_s_ASCII_MATHEMATICA; static PyObject *__pyx_n_s_ASCII_MATLAB; static PyObject *__pyx_n_s_ASCII_MATRIXMARKET; static PyObject *__pyx_n_s_ASCII_PCICE; static PyObject *__pyx_n_s_ASCII_PYTHON; static PyObject *__pyx_n_s_ASCII_SYMMODU; static PyObject *__pyx_n_s_ASCII_VTK; static PyObject *__pyx_n_s_ASCII_VTK_CELL; static PyObject *__pyx_n_s_ASCII_VTK_COORDS; static PyObject *__pyx_n_s_ASCII_XML; static PyObject *__pyx_n_s_ASFLS; static PyObject *__pyx_n_s_ASILS; static PyObject *__pyx_n_s_ASM; static PyObject *__pyx_n_s_ASMType; static PyObject *__pyx_n_s_ASPIN; static PyObject *__pyx_n_s_AU; static PyObject *__pyx_kp_s_A_matrix_with_d_rows_requires_a; static PyObject *__pyx_n_s_AssemblyType; static PyObject *__pyx_n_s_AttributeError; static PyObject *__pyx_n_s_B; static PyObject *__pyx_n_s_BACKWARD_SWEEP; static PyObject *__pyx_n_s_BAIJ; static PyObject *__pyx_n_s_BASIC; static PyObject *__pyx_n_s_BCGS; static PyObject *__pyx_n_s_BCGSL; static PyObject *__pyx_n_s_BDDC; static PyObject *__pyx_n_s_BDF; static PyObject *__pyx_n_s_BE; static PyObject *__pyx_n_s_BEULER; static PyObject *__pyx_n_s_BFBT; static PyObject *__pyx_n_s_BICG; static PyObject *__pyx_n_s_BICGSTABCUSP; static PyObject *__pyx_n_s_BINARY; static PyObject *__pyx_n_s_BINARY_MATLAB; static PyObject *__pyx_n_s_BJACOBI; static PyObject *__pyx_n_s_BLMVM; static PyObject *__pyx_n_s_BLOCK; static PyObject *__pyx_n_s_BLOCKMAT; static PyObject *__pyx_n_s_BMRM; static PyObject *__pyx_n_s_BOX; static PyObject *__pyx_n_s_BQPIP; static PyObject *__pyx_n_s_BSTRM; static PyObject *__pyx_n_s_Barrier; static PyObject *__pyx_n_s_BoundaryType; static PyObject *__pyx_n_s_C; static PyObject *__pyx_n_s_CARTESIAN; static PyObject *__pyx_n_s_CG; static PyObject *__pyx_n_s_CGLS; static PyObject *__pyx_n_s_CGNE; static PyObject *__pyx_n_s_CGS; static PyObject *__pyx_n_s_CHACO; static PyObject *__pyx_n_s_CHEBYSHEV; static PyObject *__pyx_n_s_CHOLESKY; static PyObject *__pyx_n_s_CLASSICAL; static PyObject *__pyx_n_s_CN; static PyObject *__pyx_n_s_COMM_NULL; static PyObject *__pyx_n_s_COMM_SELF; static PyObject *__pyx_n_s_COMM_WORLD; static PyObject *__pyx_n_s_COMPOSITE; static PyObject *__pyx_n_s_CONTINUE_ITERATING; static PyObject *__pyx_n_s_CONVERGED_ATOL; static PyObject *__pyx_n_s_CONVERGED_ATOL_NORMAL; static PyObject *__pyx_n_s_CONVERGED_CG_CONSTRAINED; static PyObject *__pyx_n_s_CONVERGED_CG_NEG_CURVE; static PyObject *__pyx_n_s_CONVERGED_EVENT; static PyObject *__pyx_n_s_CONVERGED_FNORM_ABS; static PyObject *__pyx_n_s_CONVERGED_FNORM_RELATIVE; static PyObject *__pyx_n_s_CONVERGED_GATOL; static PyObject *__pyx_n_s_CONVERGED_GRTOL; static PyObject *__pyx_n_s_CONVERGED_GTTOL; static PyObject *__pyx_n_s_CONVERGED_HAPPY_BREAKDOWN; static PyObject *__pyx_n_s_CONVERGED_ITERATING; static PyObject *__pyx_n_s_CONVERGED_ITS; static PyObject *__pyx_n_s_CONVERGED_MINF; static PyObject *__pyx_n_s_CONVERGED_RTOL; static PyObject *__pyx_n_s_CONVERGED_RTOL_NORMAL; static PyObject *__pyx_n_s_CONVERGED_SNORM_RELATIVE; static PyObject *__pyx_n_s_CONVERGED_STEPTOL; static PyObject *__pyx_n_s_CONVERGED_STEP_LENGTH; static PyObject *__pyx_n_s_CONVERGED_TIME; static PyObject *__pyx_n_s_CONVERGED_TR_DELTA; static PyObject *__pyx_n_s_CONVERGED_USER; static PyObject *__pyx_n_s_CP; static PyObject *__pyx_n_s_CR; static PyObject *__pyx_n_s_CRANK_NICOLSON; static PyObject *__pyx_n_s_CUSP; static PyObject *__pyx_n_s_Class; static PyObject *__pyx_n_s_Clone; static PyObject *__pyx_n_s_ComplexType; static PyObject *__pyx_n_s_CompositeType; static PyObject *__pyx_n_s_ConvergedReason; static PyObject *__pyx_n_s_DA; static PyObject *__pyx_n_s_DAAD; static PyObject *__pyx_n_s_DAE_IMPLICIT_INDEX1; static PyObject *__pyx_n_s_DAE_IMPLICIT_INDEX2; static PyObject *__pyx_n_s_DAE_IMPLICIT_INDEX3; static PyObject *__pyx_n_s_DAE_IMPLICIT_INDEXHI; static PyObject *__pyx_n_s_DAE_SEMI_EXPLICIT_INDEX1; static PyObject *__pyx_n_s_DAE_SEMI_EXPLICIT_INDEX2; static PyObject *__pyx_n_s_DAE_SEMI_EXPLICIT_INDEX3; static PyObject *__pyx_n_s_DAE_SEMI_EXPLICIT_INDEXHI; static PyObject *__pyx_n_s_DECIDE; static PyObject *__pyx_n_s_DEFAULT; static PyObject *__pyx_n_s_DENSE; static PyObject *__pyx_n_s_DETERMINE; static PyObject *__pyx_n_s_DGMRES; static PyObject *__pyx_n_s_DIAG; static PyObject *__pyx_n_s_DIFFERENT; static PyObject *__pyx_n_s_DIFFERENT_NONZERO_PATTERN; static PyObject *__pyx_n_s_DIFFERENT_NZ; static PyObject *__pyx_n_s_DIVERGED_BREAKDOWN; static PyObject *__pyx_n_s_DIVERGED_BREAKDOWN_BICG; static PyObject *__pyx_n_s_DIVERGED_DTOL; static PyObject *__pyx_n_s_DIVERGED_FNORM_NAN; static PyObject *__pyx_n_s_DIVERGED_FUNCTION_COUNT; static PyObject *__pyx_n_s_DIVERGED_FUNCTION_DOMAIN; static PyObject *__pyx_n_s_DIVERGED_INDEFINITE_MAT; static PyObject *__pyx_n_s_DIVERGED_INDEFINITE_PC; static PyObject *__pyx_n_s_DIVERGED_INNER; static PyObject *__pyx_n_s_DIVERGED_LINE_SEARCH; static PyObject *__pyx_n_s_DIVERGED_LOCAL_MIN; static PyObject *__pyx_n_s_DIVERGED_LS_FAILURE; static PyObject *__pyx_n_s_DIVERGED_MAXFCN; static PyObject *__pyx_n_s_DIVERGED_MAXITS; static PyObject *__pyx_n_s_DIVERGED_MAX_IT; static PyObject *__pyx_n_s_DIVERGED_NAN; static PyObject *__pyx_n_s_DIVERGED_NANORINF; static PyObject *__pyx_n_s_DIVERGED_NONLINEAR_SOLVE; static PyObject *__pyx_n_s_DIVERGED_NONSYMMETRIC; static PyObject *__pyx_n_s_DIVERGED_NULL; static PyObject *__pyx_n_s_DIVERGED_STEP_REJECTED; static PyObject *__pyx_n_s_DIVERGED_TR_REDUCTION; static PyObject *__pyx_n_s_DIVERGED_USER; static PyObject *__pyx_n_s_DMBoundaryType; static PyObject *__pyx_n_s_DMDAElementType; static PyObject *__pyx_n_s_DMDAInterpolationType; static PyObject *__pyx_n_s_DMDAStencilType; static PyObject *__pyx_n_s_DMType; static PyObject *__pyx_n_s_DOF; static PyObject *__pyx_n_s_DRAW; static PyObject *__pyx_n_s_DRAW_BASIC; static PyObject *__pyx_n_s_DRAW_CONTOUR; static PyObject *__pyx_n_s_DRAW_LG; static PyObject *__pyx_n_s_DRAW_PORTS; static PyObject *__pyx_n_s_DROP; static PyObject *__pyx_n_s_DrawSize; static PyObject *__pyx_n_s_Dup; static PyObject *__pyx_n_s_EIMEX; static PyObject *__pyx_n_s_EISENSTAT; static PyObject *__pyx_n_s_ELEMENTAL; static PyObject *__pyx_n_s_ERROR_LOWER_TRIANGULAR; static PyObject *__pyx_n_s_EULER; static PyObject *__pyx_n_s_EXOTIC; static PyObject *__pyx_n_s_EXPLICIT; static PyObject *__pyx_n_s_ElementType; static PyObject *__pyx_n_s_Ellipsis; static PyObject *__pyx_n_s_EquationType; static PyObject *__pyx_n_s_Error; static PyObject *__pyx_n_s_Error___init; static PyObject *__pyx_n_s_Error___nonzero; static PyObject *__pyx_n_s_Error___repr; static PyObject *__pyx_n_s_Error___str; static PyObject *__pyx_n_s_Event; static PyObject *__pyx_n_s_ExactFinalTime; static PyObject *__pyx_n_s_ExactFinalTimeOption; static PyObject *__pyx_n_s_FAS; static PyObject *__pyx_n_s_FBCGS; static PyObject *__pyx_n_s_FBCGSR; static PyObject *__pyx_n_s_FCG; static PyObject *__pyx_n_s_FE; static PyObject *__pyx_n_s_FFT; static PyObject *__pyx_n_s_FFTW; static PyObject *__pyx_n_s_FGMRES; static PyObject *__pyx_n_s_FIELDSPLIT; static PyObject *__pyx_n_s_FINAL; static PyObject *__pyx_n_s_FINAL_ASSEMBLY; static PyObject *__pyx_n_s_FINAL_ONLY; static PyObject *__pyx_n_s_FLUSH; static PyObject *__pyx_n_s_FLUSH_ASSEMBLY; static PyObject *__pyx_n_s_FORWARD; static PyObject *__pyx_n_s_FORWARD_LOCAL; static PyObject *__pyx_n_s_FORWARD_SWEEP; static PyObject *__pyx_n_s_FRB; static PyObject *__pyx_n_s_FROBENIUS; static PyObject *__pyx_n_s_FULL; static PyObject *__pyx_n_s_FULL_SIZE; static PyObject *__pyx_n_s_FactorShiftType; static PyObject *__pyx_n_s_FileMode; static PyObject *__pyx_n_s_Format; static PyObject *__pyx_n_s_Free; static PyObject *__pyx_n_s_GALERKIN; static PyObject *__pyx_n_s_GAMG; static PyObject *__pyx_n_s_GAMGType; static PyObject *__pyx_n_s_GASM; static PyObject *__pyx_n_s_GASMType; static PyObject *__pyx_n_s_GCR; static PyObject *__pyx_n_s_GENERAL; static PyObject *__pyx_n_s_GEO; static PyObject *__pyx_n_s_GETROW_UPPERTRIANGULAR; static PyObject *__pyx_n_s_GHOSTED; static PyObject *__pyx_n_s_GL; static PyObject *__pyx_n_s_GLMapType; static PyObject *__pyx_n_s_GLOBAL_MAX; static PyObject *__pyx_n_s_GLOBAL_SUM; static PyObject *__pyx_n_s_GLTR; static PyObject *__pyx_n_s_GMRES; static PyObject *__pyx_n_s_GPCG; static PyObject *__pyx_n_s_GROPPCG; static PyObject *__pyx_n_s_Get_rank; static PyObject *__pyx_n_s_Get_size; static PyObject *__pyx_kp_s_Given_d_column_indices_but_d_non; static PyObject *__pyx_n_s_H; static PyObject *__pyx_n_s_HALF; static PyObject *__pyx_n_s_HALF_SIZE; static PyObject *__pyx_n_s_HDF5; static PyObject *__pyx_n_s_HDF5_VIZ; static PyObject *__pyx_n_s_HERMITIAN; static PyObject *__pyx_n_s_HYPRE; static PyObject *__pyx_n_s_HYPRESSTRUCT; static PyObject *__pyx_n_s_HYPRESTRUCT; static PyObject *__pyx_n_s_I; static PyObject *__pyx_n_s_IBCGS; static PyObject *__pyx_n_s_ICC; static PyObject *__pyx_n_s_IGNORE_LOWER_TRIANGULAR; static PyObject *__pyx_n_s_IGNORE_NEGATIVE_INDICES; static PyObject *__pyx_n_s_IGNORE_OFF_PROC_ENTRIES; static PyObject *__pyx_n_s_IGNORE_ZERO_ENTRIES; static PyObject *__pyx_n_s_ILU; static PyObject *__pyx_n_s_IMPLICIT; static PyObject *__pyx_n_s_INBLOCKS; static PyObject *__pyx_n_s_INF; static PyObject *__pyx_n_s_INFINITY; static PyObject *__pyx_n_s_INITIAL_FINAL_ONLY; static PyObject *__pyx_n_s_INITIAL_ONLY; static PyObject *__pyx_n_s_INSERT; static PyObject *__pyx_n_s_INSERT_ALL; static PyObject *__pyx_n_s_INSERT_ALL_VALUES; static PyObject *__pyx_n_s_INSERT_BC; static PyObject *__pyx_n_s_INSERT_BC_VALUES; static PyObject *__pyx_n_s_INSERT_VALUES; static PyObject *__pyx_n_s_INTERPOLATE; static PyObject *__pyx_n_s_IPM; static PyObject *__pyx_n_s_IS; static PyObject *__pyx_n_s_ISType; static PyObject *__pyx_n_s_ITERATING; static PyObject *__pyx_kp_s_I_0_is_d_expected_d; static PyObject *__pyx_n_s_InfoType; static PyObject *__pyx_n_s_InsertMode; static PyObject *__pyx_n_s_IntType; static PyObject *__pyx_n_s_InterpolationType; static PyObject *__pyx_kp_s_Invalid_mode_expected_rw_r_or_w; static PyObject *__pyx_n_s_J; static PyObject *__pyx_n_s_JACOBI; static PyObject *__pyx_n_s_KACZMARZ; static PyObject *__pyx_n_s_KASKADE; static PyObject *__pyx_n_s_KEEP_NONZERO_PATTERN; static PyObject *__pyx_n_s_KSP; static PyObject *__pyx_n_s_KSPConvergedReason; static PyObject *__pyx_n_s_KSPNormType; static PyObject *__pyx_n_s_KSPONLY; static PyObject *__pyx_n_s_KSPType; static PyObject *__pyx_n_s_KeyError; static PyObject *__pyx_n_s_L; static PyObject *__pyx_n_s_LCD; static PyObject *__pyx_n_s_LCL; static PyObject *__pyx_n_s_LEFT; static PyObject *__pyx_n_s_LGMRES; static PyObject *__pyx_n_s_LINEAR; static PyObject *__pyx_n_s_LMVM; static PyObject *__pyx_n_s_LOCAL; static PyObject *__pyx_n_s_LOCALREF; static PyObject *__pyx_n_s_LOCAL_BACKWARD_SWEEP; static PyObject *__pyx_n_s_LOCAL_FORWARD_SWEEP; static PyObject *__pyx_n_s_LOCAL_SYMMETRIC_SWEEP; static PyObject *__pyx_n_s_LOWER; static PyObject *__pyx_n_s_LRC; static PyObject *__pyx_n_s_LSC; static PyObject *__pyx_n_s_LSQR; static PyObject *__pyx_n_s_LU; static PyObject *__pyx_n_s_Left; static PyObject *__pyx_n_s_MAIJ; static PyObject *__pyx_n_s_MAPPING; static PyObject *__pyx_n_s_MASK; static PyObject *__pyx_n_s_MAT; static PyObject *__pyx_n_s_MATCHSTEP; static PyObject *__pyx_n_s_MATHEMATICA; static PyObject *__pyx_n_s_MATLAB; static PyObject *__pyx_n_s_MAX; static PyObject *__pyx_n_s_MAX_VALUES; static PyObject *__pyx_n_s_MEMORYSCALABLE; static PyObject *__pyx_n_s_MFFD; static PyObject *__pyx_n_s_MG; static PyObject *__pyx_n_s_MGType; static PyObject *__pyx_n_s_MIMEX; static PyObject *__pyx_n_s_MINRES; static PyObject *__pyx_n_s_MIRROR; static PyObject *__pyx_n_s_ML; static PyObject *__pyx_n_s_MOAB; static PyObject *__pyx_n_s_MPI; static PyObject *__pyx_n_s_MPIADJ; static PyObject *__pyx_n_s_MPIAIJ; static PyObject *__pyx_n_s_MPIAIJCRL; static PyObject *__pyx_n_s_MPIAIJCUSP; static PyObject *__pyx_n_s_MPIAIJCUSPARSE; static PyObject *__pyx_n_s_MPIAIJPERM; static PyObject *__pyx_n_s_MPIAIJVIENNACL; static PyObject *__pyx_n_s_MPIBAIJ; static PyObject *__pyx_n_s_MPIBSTRM; static PyObject *__pyx_n_s_MPICUSP; static PyObject *__pyx_n_s_MPIDENSE; static PyObject *__pyx_n_s_MPIMAIJ; static PyObject *__pyx_n_s_MPISBAIJ; static PyObject *__pyx_n_s_MPISBSTRM; static PyObject *__pyx_n_s_MPIVIENNACL; static PyObject *__pyx_n_s_MS; static PyObject *__pyx_n_s_MULTIPLICATIVE; static PyObject *__pyx_n_s_MapType; static PyObject *__pyx_n_s_MatAssemblyType; static PyObject *__pyx_n_s_MatFactorShiftType; static PyObject *__pyx_n_s_MatInfoType; static PyObject *__pyx_n_s_MatOption; static PyObject *__pyx_n_s_MatOrderingType; static PyObject *__pyx_n_s_MatSORType; static PyObject *__pyx_n_s_MatStructure; static PyObject *__pyx_n_s_MatType; static PyObject *__pyx_n_s_MemoryError; static PyObject *__pyx_n_s_Mode; static PyObject *__pyx_kp_s_Must_provide_as_many_communicato; static PyObject *__pyx_kp_s_Must_provide_both_sizes_and_poin; static PyObject *__pyx_n_s_N1; static PyObject *__pyx_n_s_N12; static PyObject *__pyx_n_s_N2; static PyObject *__pyx_n_s_NASH; static PyObject *__pyx_n_s_NASM; static PyObject *__pyx_n_s_NATIVE; static PyObject *__pyx_n_s_NATURAL; static PyObject *__pyx_n_s_NCG; static PyObject *__pyx_n_s_ND; static PyObject *__pyx_n_s_NEST; static PyObject *__pyx_n_s_NETCDF; static PyObject *__pyx_n_s_NETWORK; static PyObject *__pyx_n_s_NEWTONLS; static PyObject *__pyx_n_s_NEWTONTR; static PyObject *__pyx_n_s_NEW_DIAGONALS; static PyObject *__pyx_n_s_NEW_NONZERO_ALLOCATION_ERR; static PyObject *__pyx_n_s_NEW_NONZERO_LOCATIONS; static PyObject *__pyx_n_s_NEW_NONZERO_LOCATION_ERR; static PyObject *__pyx_n_s_NGMRES; static PyObject *__pyx_n_s_NGS; static PyObject *__pyx_n_s_NINFINITY; static PyObject *__pyx_n_s_NLS; static PyObject *__pyx_n_s_NM; static PyObject *__pyx_n_s_NN; static PyObject *__pyx_n_s_NO; static PyObject *__pyx_n_s_NOFORMAT; static PyObject *__pyx_n_s_NONE; static PyObject *__pyx_n_s_NONLINEAR; static PyObject *__pyx_n_s_NONZERO; static PyObject *__pyx_n_s_NORMAL; static PyObject *__pyx_n_s_NORMALHERMITIAN; static PyObject *__pyx_n_s_NORM_1; static PyObject *__pyx_n_s_NORM_1_AND_2; static PyObject *__pyx_n_s_NORM_2; static PyObject *__pyx_n_s_NORM_ALWAYS; static PyObject *__pyx_n_s_NORM_DEFAULT; static PyObject *__pyx_n_s_NORM_FINAL_ONLY; static PyObject *__pyx_n_s_NORM_FROBENIUS; static PyObject *__pyx_n_s_NORM_INFINITY; static PyObject *__pyx_n_s_NORM_INITIAL_FINAL_ONLY; static PyObject *__pyx_n_s_NORM_INITIAL_ONLY; static PyObject *__pyx_n_s_NORM_MAX; static PyObject *__pyx_n_s_NORM_NATURAL; static PyObject *__pyx_n_s_NORM_NONE; static PyObject *__pyx_n_s_NORM_PRECONDITIONED; static PyObject *__pyx_n_s_NORM_UNPRECONDITIONED; static PyObject *__pyx_n_s_NOT_SET_VALUES; static PyObject *__pyx_n_s_NO_OFF_PROC_ENTRIES; static PyObject *__pyx_n_s_NO_OFF_PROC_ZERO_ROWS; static PyObject *__pyx_n_s_NRICHARDSON; static PyObject *__pyx_n_s_NTL; static PyObject *__pyx_n_s_NTR; static PyObject *__pyx_n_s_NZ; static PyObject *__pyx_n_s_NormSchedule; static PyObject *__pyx_n_s_NormType; static PyObject *__pyx_n_s_NotImplemented; static PyObject *__pyx_n_s_NotImplementedError; static PyObject *__pyx_n_s_O; static PyObject *__pyx_n_s_ODE_EXPLICIT; static PyObject *__pyx_n_s_ODE_IMPLICIT; static PyObject *__pyx_n_s_OWD; static PyObject *__pyx_n_s_OWLQN; static PyObject *__pyx_kp_s_Object_is_not_writable; static PyObject *__pyx_n_s_Option; static PyObject *__pyx_n_s_OrderingType; static PyObject *__pyx_kp_s_Out_of_memory_Allocated_d_Used_b; static PyObject *__pyx_n_s_P; static PyObject *__pyx_n_s_P1; static PyObject *__pyx_n_s_PARMETIS; static PyObject *__pyx_n_s_PARMS; static PyObject *__pyx_n_s_PATCH; static PyObject *__pyx_n_s_PBJACOBI; static PyObject *__pyx_n_s_PCASMType; static PyObject *__pyx_n_s_PCCompositeType; static PyObject *__pyx_n_s_PCFieldSplitSchurFactType; static PyObject *__pyx_n_s_PCFieldSplitSchurPreType; static PyObject *__pyx_n_s_PCGAMGType; static PyObject *__pyx_n_s_PCGASMType; static PyObject *__pyx_n_s_PCMGType; static PyObject *__pyx_n_s_PCSide; static PyObject *__pyx_n_s_PCType; static PyObject *__pyx_n_s_PD; static PyObject *__pyx_n_s_PERIODIC; static PyObject *__pyx_kp_s_PETSc_Error_d; static PyObject *__pyx_n_s_PFMG; static PyObject *__pyx_n_s_PGMRES; static PyObject *__pyx_n_s_PINFINITY; static PyObject *__pyx_n_s_PIPECG; static PyObject *__pyx_n_s_PIPECGRR; static PyObject *__pyx_n_s_PIPECR; static PyObject *__pyx_n_s_PIPEFCG; static PyObject *__pyx_n_s_PIPEFGMRES; static PyObject *__pyx_n_s_PIPEGCR; static PyObject *__pyx_n_s_PLEX; static PyObject *__pyx_n_s_POSITIVE_DEFINITE; static PyObject *__pyx_n_s_POUNDERS; static PyObject *__pyx_n_s_PREALLOCATOR; static PyObject *__pyx_n_s_PRECONDITIONED; static PyObject *__pyx_n_s_PREONLY; static PyObject *__pyx_n_s_PSEUDO; static PyObject *__pyx_n_s_PYTHON; static PyObject *__pyx_n_s_PartitionerType; static PyObject *__pyx_kp_u_Portable_Extensible_Toolkit_for; static PyObject *__pyx_n_s_Print; static PyObject *__pyx_n_s_ProblemType; static PyObject *__pyx_n_s_Q0; static PyObject *__pyx_n_s_Q1; static PyObject *__pyx_n_s_QCG; static PyObject *__pyx_n_s_QMD; static PyObject *__pyx_n_s_QN; static PyObject *__pyx_n_s_QUARTER; static PyObject *__pyx_n_s_QUARTER_SIZE; static PyObject *__pyx_n_s_R; static PyObject *__pyx_n_s_RAND; static PyObject *__pyx_n_s_RAND48; static PyObject *__pyx_n_s_RANDER48; static PyObject *__pyx_n_s_RCM; static PyObject *__pyx_n_s_READ; static PyObject *__pyx_n_s_REDISTRIBUTE; static PyObject *__pyx_n_s_REDUNDANT; static PyObject *__pyx_n_s_RESTRICT; static PyObject *__pyx_n_s_REVERSE; static PyObject *__pyx_n_s_REVERSE_LOCAL; static PyObject *__pyx_n_s_RICHARDSON; static PyObject *__pyx_n_s_RIGHT; static PyObject *__pyx_n_s_RK; static PyObject *__pyx_n_s_ROSW; static PyObject *__pyx_n_s_ROWLENGTH; static PyObject *__pyx_n_s_ROW_ORIENTED; static PyObject *__pyx_n_s_RUNGE_KUTTA; static PyObject *__pyx_n_s_RandomType; static PyObject *__pyx_n_s_RealType; static PyObject *__pyx_n_s_Reason; static PyObject *__pyx_n_s_Right; static PyObject *__pyx_n_s_RuntimeError; static PyObject *__pyx_n_s_S; static PyObject *__pyx_n_s_SACUSP; static PyObject *__pyx_n_s_SACUSPPOLY; static PyObject *__pyx_n_s_SAME; static PyObject *__pyx_n_s_SAME_NONZERO_PATTERN; static PyObject *__pyx_n_s_SAME_NZ; static PyObject *__pyx_n_s_SAWS; static PyObject *__pyx_n_s_SBAIJ; static PyObject *__pyx_n_s_SBSTRM; static PyObject *__pyx_n_s_SCATTER; static PyObject *__pyx_n_s_SCATTER_FORWARD; static PyObject *__pyx_n_s_SCATTER_FORWARD_LOCAL; static PyObject *__pyx_n_s_SCATTER_LOCAL; static PyObject *__pyx_n_s_SCATTER_REVERSE; static PyObject *__pyx_n_s_SCATTER_REVERSE_LOCAL; static PyObject *__pyx_n_s_SCHUR; static PyObject *__pyx_n_s_SCHURCOMPLEMENT; static PyObject *__pyx_n_s_SELF; static PyObject *__pyx_n_s_SELFP; static PyObject *__pyx_n_s_SEQ; static PyObject *__pyx_n_s_SEQAIJ; static PyObject *__pyx_n_s_SEQAIJCRL; static PyObject *__pyx_n_s_SEQAIJCUSP; static PyObject *__pyx_n_s_SEQAIJCUSPARSE; static PyObject *__pyx_n_s_SEQAIJPERM; static PyObject *__pyx_n_s_SEQAIJVIENNACL; static PyObject *__pyx_n_s_SEQBAIJ; static PyObject *__pyx_n_s_SEQBSTRM; static PyObject *__pyx_n_s_SEQCUFFT; static PyObject *__pyx_n_s_SEQCUSP; static PyObject *__pyx_n_s_SEQDENSE; static PyObject *__pyx_n_s_SEQMAIJ; static PyObject *__pyx_n_s_SEQSBAIJ; static PyObject *__pyx_n_s_SEQSBSTRM; static PyObject *__pyx_n_s_SEQVIENNACL; static PyObject *__pyx_n_s_SFType; static PyObject *__pyx_n_s_SHARED; static PyObject *__pyx_n_s_SHELL; static PyObject *__pyx_n_s_SLICED; static PyObject *__pyx_n_s_SNESConvergedReason; static PyObject *__pyx_n_s_SNESNormSchedule; static PyObject *__pyx_n_s_SNESType; static PyObject *__pyx_n_s_SOCKET; static PyObject *__pyx_n_s_SOR; static PyObject *__pyx_n_s_SORType; static PyObject *__pyx_n_s_SPAI; static PyObject *__pyx_n_s_SPD; static PyObject *__pyx_n_s_SPECIAL; static PyObject *__pyx_n_s_SPECTRAL; static PyObject *__pyx_n_s_SPRNG; static PyObject *__pyx_n_s_SSFLS; static PyObject *__pyx_n_s_SSILS; static PyObject *__pyx_n_s_SSP; static PyObject *__pyx_n_s_STANDARD; static PyObject *__pyx_n_s_STAR; static PyObject *__pyx_n_s_STCG; static PyObject *__pyx_n_s_STDERR; static PyObject *__pyx_n_s_STDOUT; static PyObject *__pyx_n_s_STEPOVER; static PyObject *__pyx_n_s_STRIDE; static PyObject *__pyx_n_s_STRING; static PyObject *__pyx_n_s_STRUCTURALLY_SYMMETRIC; static PyObject *__pyx_n_s_SUBMATRIX; static PyObject *__pyx_n_s_SUBSET; static PyObject *__pyx_n_s_SUBSET_NONZERO_PATTERN; static PyObject *__pyx_n_s_SUBSET_NZ; static PyObject *__pyx_n_s_SUBSET_OFF_PROC_ENTRIES; static PyObject *__pyx_n_s_SUNDIALS; static PyObject *__pyx_n_s_SVD; static PyObject *__pyx_n_s_SYMMETRIC; static PyObject *__pyx_n_s_SYMMETRIC_MULTIPLICATIVE; static PyObject *__pyx_n_s_SYMMETRY_ETERNAL; static PyObject *__pyx_n_s_SYMMETRY_SWEEP; static PyObject *__pyx_n_s_SYMMLQ; static PyObject *__pyx_n_s_SYSPFMG; static PyObject *__pyx_n_s_ScalarType; static PyObject *__pyx_n_s_ScatterMode; static PyObject *__pyx_n_s_SchurFactType; static PyObject *__pyx_n_s_SchurPreType; static PyObject *__pyx_n_s_Side; static PyObject *__pyx_n_s_Size; static PyObject *__pyx_n_s_Stage; static PyObject *__pyx_n_s_Stencil; static PyObject *__pyx_n_s_StencilType; static PyObject *__pyx_n_s_Structure; static PyObject *__pyx_n_s_SystemError; static PyObject *__pyx_n_s_TAOConvergedReason; static PyObject *__pyx_n_s_TAOType; static PyObject *__pyx_kp_s_TAO_Solver_Termination_Reasons; static PyObject *__pyx_kp_s_TAO_Solver_Types; static PyObject *__pyx_n_s_TCQMR; static PyObject *__pyx_n_s_TELESCOPE; static PyObject *__pyx_n_s_TEST; static PyObject *__pyx_n_s_TFQMR; static PyObject *__pyx_n_s_TFS; static PyObject *__pyx_n_s_TH; static PyObject *__pyx_n_s_THETA; static PyObject *__pyx_n_s_THIRD; static PyObject *__pyx_n_s_THIRD_SIZE; static PyObject *__pyx_n_s_TRANSPOSEMAT; static PyObject *__pyx_n_s_TRON; static PyObject *__pyx_n_s_TSConvergedReason; static PyObject *__pyx_n_s_TSEquationType; static PyObject *__pyx_n_s_TSExactFinalTime; static PyObject *__pyx_n_s_TSIRM; static PyObject *__pyx_n_s_TSProblemType; static PyObject *__pyx_n_s_TSType; static PyObject *__pyx_n_s_TWIST; static PyObject *__pyx_n_s_Type; static PyObject *__pyx_n_s_TypeError; static PyObject *__pyx_n_s_U; static PyObject *__pyx_n_s_UA; static PyObject *__pyx_n_s_UNPRECONDITIONED; static PyObject *__pyx_n_s_UNSPECIFIED; static PyObject *__pyx_n_s_UNUSED_NONZERO_LOCATION_ERR; static PyObject *__pyx_n_s_UPDATE; static PyObject *__pyx_n_s_UPPER; static PyObject *__pyx_n_s_USER; static PyObject *__pyx_n_s_USE_HASH_TABLE; static PyObject *__pyx_n_s_USE_INODES; static PyObject *__pyx_n_s_V; static PyObject *__pyx_n_s_VIENNACL; static PyObject *__pyx_n_s_VINEWTONRSLS; static PyObject *__pyx_n_s_VINEWTONSSLS; static PyObject *__pyx_n_s_VTK; static PyObject *__pyx_n_s_VTK_VTR; static PyObject *__pyx_n_s_VTK_VTS; static PyObject *__pyx_n_s_VTK_VTU; static PyObject *__pyx_n_s_VU; static PyObject *__pyx_n_s_ValueError; static PyObject *__pyx_n_s_VecOption; static PyObject *__pyx_n_s_VecType; static PyObject *__pyx_kp_s_Vector_local_size_d_is_not_compa; static PyObject *__pyx_n_s_ViewerFormat; static PyObject *__pyx_n_s_ViewerType; static PyObject *__pyx_n_s_W; static PyObject *__pyx_n_s_WBM; static PyObject *__pyx_n_s_WINDOW; static PyObject *__pyx_n_s_WRITE; static PyObject *__pyx_n_s_X; static PyObject *__pyx_n_s_ZERO_INITIAL_GUESS; static PyObject *__pyx_kp_s__10; static PyObject *__pyx_kp_s__2; static PyObject *__pyx_kp_s__32; static PyObject *__pyx_kp_b__5; static PyObject *__pyx_kp_s__5; static PyObject *__pyx_n_s_a; static PyObject *__pyx_kp_s_a_2; static PyObject *__pyx_n_s_abort; static PyObject *__pyx_kp_s_accessing_non_existent_buffer_se; static PyObject *__pyx_n_s_addFlops; static PyObject *__pyx_n_s_addv; static PyObject *__pyx_n_s_all; static PyObject *__pyx_n_s_alpha; static PyObject *__pyx_n_s_alpha2; static PyObject *__pyx_n_s_alpha_f; static PyObject *__pyx_n_s_alpha_m; static PyObject *__pyx_n_s_alphas; static PyObject *__pyx_n_s_amount; static PyObject *__pyx_n_s_app; static PyObject *__pyx_n_s_appctx; static PyObject *__pyx_n_s_append; static PyObject *__pyx_n_s_apply; static PyObject *__pyx_n_s_args; static PyObject *__pyx_n_s_array; static PyObject *__pyx_n_s_array_interface; static PyObject *__pyx_kp_s_array_size_d_and_vector_local_si; static PyObject *__pyx_kp_s_array_size_d_incompatible_with_v; static PyObject *__pyx_n_s_array_w; static PyObject *__pyx_n_s_asmtype; static PyObject *__pyx_n_s_assemblies; static PyObject *__pyx_n_s_assembly; static PyObject *__pyx_n_s_atol; static PyObject *__pyx_n_s_attr; static PyObject *__pyx_n_s_au; static PyObject *__pyx_n_s_author; static PyObject *__pyx_n_s_authorinfo; static PyObject *__pyx_n_s_axpy; static PyObject *__pyx_n_s_b; static PyObject *__pyx_n_s_barrier; static PyObject *__pyx_n_s_bcComps; static PyObject *__pyx_n_s_bcField; static PyObject *__pyx_n_s_bcPoints; static PyObject *__pyx_kp_s_bcPoints_is_a_required_argument; static PyObject *__pyx_n_s_begin; static PyObject *__pyx_n_s_begin_args; static PyObject *__pyx_n_s_begin_kargs; static PyObject *__pyx_n_s_beta; static PyObject *__pyx_n_s_block_size; static PyObject *__pyx_kp_s_block_size_d_must_be_positive; static PyObject *__pyx_kp_s_block_size_not_set; static PyObject *__pyx_n_s_boundary; static PyObject *__pyx_n_s_boundary_type; static PyObject *__pyx_n_s_box; static PyObject *__pyx_n_s_bs; static PyObject *__pyx_n_s_bsize; static PyObject *__pyx_n_s_buffer_w; static PyObject *__pyx_n_s_c; static PyObject *__pyx_kp_s_c_d; static PyObject *__pyx_kp_s_cannot_place_input_array_size_d; static PyObject *__pyx_n_s_catol; static PyObject *__pyx_n_s_cell; static PyObject *__pyx_kp_s_cell_indices_must_have_two_dimen; static PyObject *__pyx_n_s_cells; static PyObject *__pyx_n_s_cgid; static PyObject *__pyx_n_s_citation; static PyObject *__pyx_n_s_cmap; static PyObject *__pyx_n_s_coarsen; static PyObject *__pyx_n_s_col; static PyObject *__pyx_n_s_col_bsize; static PyObject *__pyx_n_s_cols; static PyObject *__pyx_n_s_column; static PyObject *__pyx_kp_s_column_indices_must_have_two_dim; static PyObject *__pyx_n_s_comm; static PyObject *__pyx_n_s_comms; static PyObject *__pyx_kp_s_communicator_not_owned; static PyObject *__pyx_n_s_compressed; static PyObject *__pyx_n_s_cone; static PyObject *__pyx_n_s_coneOrientation; static PyObject *__pyx_n_s_conePoint; static PyObject *__pyx_n_s_conePos; static PyObject *__pyx_n_s_constant; static PyObject *__pyx_n_s_constraints; static PyObject *__pyx_n_s_context; static PyObject *__pyx_n_s_converged; static PyObject *__pyx_n_s_coordinates; static PyObject *__pyx_kp_s_coordinates_must_have_two_dimens; static PyObject *__pyx_n_s_coords; static PyObject *__pyx_kp_s_coords_vertices_must_have_two_di; static PyObject *__pyx_n_s_copy; static PyObject *__pyx_n_s_count; static PyObject *__pyx_n_s_crank; static PyObject *__pyx_n_s_createGlobalVec; static PyObject *__pyx_n_s_createGlobalVector; static PyObject *__pyx_n_s_createLabel; static PyObject *__pyx_n_s_createLocalVec; static PyObject *__pyx_n_s_createLocalVector; static PyObject *__pyx_n_s_createMat; static PyObject *__pyx_n_s_createMatrix; static PyObject *__pyx_n_s_createNaturalVec; static PyObject *__pyx_n_s_createNaturalVector; static PyObject *__pyx_n_s_createVecLeft; static PyObject *__pyx_n_s_createVecRight; static PyObject *__pyx_n_s_createVecs; static PyObject *__pyx_n_s_create_gvec; static PyObject *__pyx_n_s_create_injection; static PyObject *__pyx_n_s_create_interpolation; static PyObject *__pyx_n_s_create_lvec; static PyObject *__pyx_n_s_create_matrix; static PyObject *__pyx_n_s_create_subdm; static PyObject *__pyx_n_s_crtol; static PyObject *__pyx_n_s_csize; static PyObject *__pyx_n_s_csr; static PyObject *__pyx_n_s_ctype; static PyObject *__pyx_kp_s_d_s; static PyObject *__pyx_n_s_da; static PyObject *__pyx_n_s_data; static PyObject *__pyx_n_s_date; static PyObject *__pyx_n_s_debugger; static PyObject *__pyx_n_s_decode; static PyObject *__pyx_n_s_decomp; static PyObject *__pyx_n_s_default; static PyObject *__pyx_n_s_delValue; static PyObject *__pyx_n_s_design; static PyObject *__pyx_n_s_destroy; static PyObject *__pyx_n_s_devel; static PyObject *__pyx_n_s_diag; static PyObject *__pyx_n_s_diagonalScale; static PyObject *__pyx_n_s_diagonal_fill; static PyObject *__pyx_n_s_dim; static PyObject *__pyx_n_s_dims; static PyObject *__pyx_n_s_display; static PyObject *__pyx_n_s_divtol; static PyObject *__pyx_n_s_dm; static PyObject *__pyx_n_s_dm_type; static PyObject *__pyx_n_s_doc; static PyObject *__pyx_n_s_dof; static PyObject *__pyx_n_s_drop; static PyObject *__pyx_n_s_dt; static PyObject *__pyx_n_s_dtcol; static PyObject *__pyx_n_s_dtcount; static PyObject *__pyx_n_s_duplicate; static PyObject *__pyx_n_s_edges; static PyObject *__pyx_n_s_elem_type; static PyObject *__pyx_n_s_emacs; static PyObject *__pyx_kp_s_empty_citation; static PyObject *__pyx_kp_s_empty_name; static PyObject *__pyx_n_s_encode; static PyObject *__pyx_n_s_end; static PyObject *__pyx_n_s_end_args; static PyObject *__pyx_n_s_end_kargs; static PyObject *__pyx_n_s_enter; static PyObject *__pyx_n_s_entry; static PyObject *__pyx_n_s_enumerate; static PyObject *__pyx_n_s_eqtype; static PyObject *__pyx_n_s_errhandler; static PyObject *__pyx_kp_s_error_code_d; static PyObject *__pyx_n_s_exit; static PyObject *__pyx_n_s_exoid; static PyObject *__pyx_kp_s_expecting_a_C_contiguous_array; static PyObject *__pyx_kp_s_expecting_tuple_list_or_dict; static PyObject *__pyx_n_s_f; static PyObject *__pyx_n_s_faces; static PyObject *__pyx_n_s_factor_mallocs; static PyObject *__pyx_n_s_field; static PyObject *__pyx_n_s_fieldName; static PyObject *__pyx_n_s_filename; static PyObject *__pyx_n_s_fill; static PyObject *__pyx_n_s_fill_ratio_given; static PyObject *__pyx_n_s_fill_ratio_needed; static PyObject *__pyx_n_s_finalize; static PyObject *__pyx_n_s_first; static PyObject *__pyx_n_s_flag; static PyObject *__pyx_n_s_flops; static PyObject *__pyx_n_s_flush; static PyObject *__pyx_n_s_fnorm; static PyObject *__pyx_n_s_force; static PyObject *__pyx_n_s_format; static PyObject *__pyx_n_s_forward; static PyObject *__pyx_n_s_function; static PyObject *__pyx_n_s_g; static PyObject *__pyx_n_s_gamgtype; static PyObject *__pyx_n_s_gamma; static PyObject *__pyx_n_s_gasmtype; static PyObject *__pyx_n_s_gatol; static PyObject *__pyx_n_s_get; static PyObject *__pyx_n_s_getActive; static PyObject *__pyx_n_s_getActiveAll; static PyObject *__pyx_n_s_getAppCtx; static PyObject *__pyx_n_s_getArray; static PyObject *__pyx_n_s_getBlockIndices; static PyObject *__pyx_n_s_getBlockInfo; static PyObject *__pyx_n_s_getBlockSize; static PyObject *__pyx_n_s_getBlockSizes; static PyObject *__pyx_n_s_getBoundaryType; static PyObject *__pyx_n_s_getBuffer; static PyObject *__pyx_n_s_getCPUTime; static PyObject *__pyx_n_s_getClassId; static PyObject *__pyx_n_s_getClassName; static PyObject *__pyx_n_s_getComm; static PyObject *__pyx_n_s_getConstraintTolerances; static PyObject *__pyx_n_s_getConvergedReason; static PyObject *__pyx_n_s_getConvergenceHistory; static PyObject *__pyx_n_s_getCorners; static PyObject *__pyx_n_s_getDM; static PyObject *__pyx_n_s_getDefaultComm; static PyObject *__pyx_n_s_getDim; static PyObject *__pyx_n_s_getDimension; static PyObject *__pyx_n_s_getDof; static PyObject *__pyx_n_s_getEquationType; static PyObject *__pyx_n_s_getFlops; static PyObject *__pyx_n_s_getFunctionTolerances; static PyObject *__pyx_n_s_getFunctionValue; static PyObject *__pyx_n_s_getGhostCorners; static PyObject *__pyx_n_s_getGhostRanges; static PyObject *__pyx_n_s_getGradient; static PyObject *__pyx_n_s_getGradientTolerances; static PyObject *__pyx_n_s_getIndices; static PyObject *__pyx_n_s_getInfo; static PyObject *__pyx_n_s_getInitialGuessKnoll; static PyObject *__pyx_n_s_getInitialGuessNonzero; static PyObject *__pyx_n_s_getInterval; static PyObject *__pyx_n_s_getIterationNumber; static PyObject *__pyx_n_s_getKSP; static PyObject *__pyx_n_s_getKSPFailures; static PyObject *__pyx_n_s_getLinearSolveFailures; static PyObject *__pyx_n_s_getLocalSize; static PyObject *__pyx_n_s_getMatrix; static PyObject *__pyx_n_s_getMaxFunctionEvaluations; static PyObject *__pyx_n_s_getMaxKSPFailures; static PyObject *__pyx_n_s_getMaxLinearSolveFailures; static PyObject *__pyx_n_s_getMaxNonlinearStepFailures; static PyObject *__pyx_n_s_getMaxStepFailures; static PyObject *__pyx_n_s_getMaxSteps; static PyObject *__pyx_n_s_getMaxTime; static PyObject *__pyx_n_s_getNPC; static PyObject *__pyx_n_s_getName; static PyObject *__pyx_n_s_getNonlinearStepFailures; static PyObject *__pyx_n_s_getNormType; static PyObject *__pyx_n_s_getNumber; static PyObject *__pyx_n_s_getNumberDM; static PyObject *__pyx_n_s_getObjectiveValue; static PyObject *__pyx_n_s_getOperators; static PyObject *__pyx_n_s_getOptionsPrefix; static PyObject *__pyx_n_s_getOwnershipRange; static PyObject *__pyx_n_s_getOwnershipRanges; static PyObject *__pyx_n_s_getPC; static PyObject *__pyx_n_s_getPCSide; static PyObject *__pyx_n_s_getProblemType; static PyObject *__pyx_n_s_getProcSizes; static PyObject *__pyx_n_s_getRanges; static PyObject *__pyx_n_s_getRank; static PyObject *__pyx_n_s_getRefCount; static PyObject *__pyx_n_s_getResidualNorm; static PyObject *__pyx_n_s_getRhs; static PyObject *__pyx_n_s_getSNES; static PyObject *__pyx_n_s_getSeed; static PyObject *__pyx_n_s_getSize; static PyObject *__pyx_n_s_getSizes; static PyObject *__pyx_n_s_getSolution; static PyObject *__pyx_n_s_getSolutionNorm; static PyObject *__pyx_n_s_getSolutionUpdate; static PyObject *__pyx_n_s_getStencil; static PyObject *__pyx_n_s_getStencilType; static PyObject *__pyx_n_s_getStencilWidth; static PyObject *__pyx_n_s_getStepFailures; static PyObject *__pyx_n_s_getStepNumber; static PyObject *__pyx_n_s_getString; static PyObject *__pyx_n_s_getTime; static PyObject *__pyx_n_s_getTimeStep; static PyObject *__pyx_n_s_getTolerances; static PyObject *__pyx_n_s_getType; static PyObject *__pyx_n_s_getUseEW; static PyObject *__pyx_n_s_getUseFD; static PyObject *__pyx_n_s_getUseMF; static PyObject *__pyx_n_s_getValue; static PyObject *__pyx_n_s_getVecLeft; static PyObject *__pyx_n_s_getVecRight; static PyObject *__pyx_n_s_getVecs; static PyObject *__pyx_n_s_getVersion; static PyObject *__pyx_n_s_getVersionInfo; static PyObject *__pyx_n_s_getVisible; static PyObject *__pyx_n_s_ghosted; static PyObject *__pyx_n_s_ghosts; static PyObject *__pyx_kp_s_ghosts_size_d_array_size_d_and_v; static PyObject *__pyx_kp_s_global_size_d_not_divisible_by_b; static PyObject *__pyx_n_s_globalsec; static PyObject *__pyx_n_s_gradient; static PyObject *__pyx_n_s_group; static PyObject *__pyx_n_s_grtol; static PyObject *__pyx_n_s_gtol; static PyObject *__pyx_n_s_gttol; static PyObject *__pyx_n_s_gv; static PyObject *__pyx_n_s_gvec; static PyObject *__pyx_n_s_handle; static PyObject *__pyx_n_s_hasLabel; static PyObject *__pyx_n_s_hasLagrange; static PyObject *__pyx_n_s_hasName; static PyObject *__pyx_n_s_hessian; static PyObject *__pyx_kp_s_home_devel_petsc4py_3_7_0_src_P; static PyObject *__pyx_kp_s_home_devel_petsc4py_3_7_0_src_P_2; static PyObject *__pyx_n_s_hypretype; static PyObject *__pyx_n_s_icntl; static PyObject *__pyx_n_s_idx; static PyObject *__pyx_n_s_idxm; static PyObject *__pyx_n_s_ierr; static PyObject *__pyx_n_s_ignore; static PyObject *__pyx_n_s_imag; static PyObject *__pyx_n_s_imex; static PyObject *__pyx_n_s_imode; static PyObject *__pyx_n_s_import; static PyObject *__pyx_n_s_inblocks; static PyObject *__pyx_kp_s_incompatible_array_sizes; static PyObject *__pyx_kp_s_incompatible_array_sizes_ni_d_nj; static PyObject *__pyx_kp_s_incompatible_array_sizes_ni_d_nv; static PyObject *__pyx_kp_s_incompatible_array_sizes_ni_d_nv_2; static PyObject *__pyx_kp_s_incompatible_array_sizes_nv_d; static PyObject *__pyx_n_s_index; static PyObject *__pyx_n_s_indices; static PyObject *__pyx_n_s_info; static PyObject *__pyx_n_s_infoAllow; static PyObject *__pyx_n_s_init; static PyObject *__pyx_n_s_initial_time; static PyObject *__pyx_n_s_initial_time_step; static PyObject *__pyx_n_s_initialguess; static PyObject *__pyx_n_s_initialize; static PyObject *__pyx_kp_s_input_arrays_have_incompatible_s; static PyObject *__pyx_n_s_insert; static PyObject *__pyx_n_s_interp_type; static PyObject *__pyx_n_s_interpolate; static PyObject *__pyx_n_s_interval; static PyObject *__pyx_n_s_invert; static PyObject *__pyx_n_s_isAssembled; static PyObject *__pyx_n_s_isFinalized; static PyObject *__pyx_n_s_isHermitian; static PyObject *__pyx_n_s_isIdentity; static PyObject *__pyx_n_s_isInitialized; static PyObject *__pyx_n_s_isPermutation; static PyObject *__pyx_n_s_isSorted; static PyObject *__pyx_n_s_isStructurallySymmetric; static PyObject *__pyx_n_s_isSymmetric; static PyObject *__pyx_n_s_is_from; static PyObject *__pyx_n_s_is_to; static PyObject *__pyx_n_s_is_type; static PyObject *__pyx_n_s_iscol; static PyObject *__pyx_n_s_iscols; static PyObject *__pyx_n_s_iset; static PyObject *__pyx_n_s_isets; static PyObject *__pyx_n_s_isperm; static PyObject *__pyx_n_s_isrow; static PyObject *__pyx_n_s_isrows; static PyObject *__pyx_n_s_itemsize; static PyObject *__pyx_n_s_its; static PyObject *__pyx_n_s_ival; static PyObject *__pyx_n_s_jacobian; static PyObject *__pyx_n_s_jacobian_design; static PyObject *__pyx_n_s_jacobian_state; static PyObject *__pyx_n_s_join; static PyObject *__pyx_n_s_kargs; static PyObject *__pyx_kp_s_key_d_cannot_register_s_already; static PyObject *__pyx_n_s_keys; static PyObject *__pyx_n_s_kind; static PyObject *__pyx_n_s_klass; static PyObject *__pyx_n_s_ksp; static PyObject *__pyx_n_s_ksp_type; static PyObject *__pyx_n_s_l; static PyObject *__pyx_n_s_label; static PyObject *__pyx_n_s_left; static PyObject *__pyx_n_s_length; static PyObject *__pyx_n_s_level; static PyObject *__pyx_n_s_levels; static PyObject *__pyx_n_s_lgmap; static PyObject *__pyx_n_s_linear_its; static PyObject *__pyx_n_s_lits; static PyObject *__pyx_n_s_local; static PyObject *__pyx_kp_s_local_and_global_sizes_cannot_be; static PyObject *__pyx_kp_s_local_size_d_not_divisible_by_bl; static PyObject *__pyx_n_s_localsec; static PyObject *__pyx_n_s_locs; static PyObject *__pyx_n_s_logFlops; static PyObject *__pyx_n_s_lower; static PyObject *__pyx_n_s_ltog; static PyObject *__pyx_n_s_ltol; static PyObject *__pyx_n_s_lv; static PyObject *__pyx_n_s_lvecs; static PyObject *__pyx_n_s_main; static PyObject *__pyx_n_s_major; static PyObject *__pyx_n_s_mallocs; static PyObject *__pyx_n_s_map_type; static PyObject *__pyx_n_s_mat; static PyObject *__pyx_n_s_matMult; static PyObject *__pyx_n_s_mat_type; static PyObject *__pyx_n_s_mats; static PyObject *__pyx_n_s_max_fails; static PyObject *__pyx_n_s_max_funcs; static PyObject *__pyx_n_s_max_it; static PyObject *__pyx_n_s_max_steps; static PyObject *__pyx_n_s_max_time; static PyObject *__pyx_n_s_memo; static PyObject *__pyx_n_s_memory; static PyObject *__pyx_n_s_messageLength; static PyObject *__pyx_n_s_metaclass; static PyObject *__pyx_n_s_mgtype; static PyObject *__pyx_n_s_minor; static PyObject *__pyx_n_s_mirror; static PyObject *__pyx_n_s_mode; static PyObject *__pyx_n_s_model; static PyObject *__pyx_n_s_module; static PyObject *__pyx_n_s_monitor; static PyObject *__pyx_n_s_mpi4py; static PyObject *__pyx_kp_s_mpi4py_MPI; static PyObject *__pyx_n_s_mpiabort; static PyObject *__pyx_n_s_mult; static PyObject *__pyx_n_s_n; static PyObject *__pyx_n_s_na; static PyObject *__pyx_n_s_name; static PyObject *__pyx_n_s_name_2; static PyObject *__pyx_n_s_ncycle; static PyObject *__pyx_n_s_newsec; static PyObject *__pyx_n_s_newvec; static PyObject *__pyx_n_s_nleaves; static PyObject *__pyx_n_s_nlevels; static PyObject *__pyx_n_s_nlocal; static PyObject *__pyx_n_s_nmax; static PyObject *__pyx_n_s_nmin; static PyObject *__pyx_n_s_nnz; static PyObject *__pyx_n_s_none; static PyObject *__pyx_n_s_nonzero; static PyObject *__pyx_n_s_nonzero_2; static PyObject *__pyx_n_s_norm; static PyObject *__pyx_n_s_norm_type; static PyObject *__pyx_n_s_normsched; static PyObject *__pyx_n_s_normtype; static PyObject *__pyx_n_s_nroots; static PyObject *__pyx_n_s_nsd; static PyObject *__pyx_n_s_nsp; static PyObject *__pyx_n_s_nsubcomm; static PyObject *__pyx_kp_s_null_communicator; static PyObject *__pyx_n_s_numComp; static PyObject *__pyx_n_s_numDof; static PyObject *__pyx_n_s_numFields; static PyObject *__pyx_n_s_numMessages; static PyObject *__pyx_n_s_numProcs; static PyObject *__pyx_n_s_numReductions; static PyObject *__pyx_kp_s_number_of_dimensions_d_and_numbe; static PyObject *__pyx_n_s_numcells; static PyObject *__pyx_n_s_nz_allocated; static PyObject *__pyx_n_s_nz_unneeded; static PyObject *__pyx_n_s_nz_used; static PyObject *__pyx_n_s_nzdiag; static PyObject *__pyx_n_s_obj; static PyObject *__pyx_n_s_object; static PyObject *__pyx_n_s_objective; static PyObject *__pyx_n_s_objgrad; static PyObject *__pyx_n_s_offset; static PyObject *__pyx_n_s_omega; static PyObject *__pyx_kp_s_only_and; static PyObject *__pyx_n_s_operators; static PyObject *__pyx_n_s_option; static PyObject *__pyx_kp_s_option_prefix_must_be_string; static PyObject *__pyx_kp_s_option_prefix_should_not_have_sp; static PyObject *__pyx_kp_s_option_prefix_should_not_start_w; static PyObject *__pyx_n_s_options; static PyObject *__pyx_n_s_opts; static PyObject *__pyx_n_s_ord_type; static PyObject *__pyx_n_s_order; static PyObject *__pyx_n_s_orientation; static PyObject *__pyx_n_s_otype; static PyObject *__pyx_n_s_out; static PyObject *__pyx_n_s_output; static PyObject *__pyx_n_s_overlap; static PyObject *__pyx_kp_s_ownership_range_size_d_and_numbe; static PyObject *__pyx_n_s_ownership_ranges; static PyObject *__pyx_n_s_ozz; static PyObject *__pyx_n_s_p; static PyObject *__pyx_n_s_p1; static PyObject *__pyx_n_s_pEnd; static PyObject *__pyx_n_s_pStart; static PyObject *__pyx_n_s_parent; static PyObject *__pyx_n_s_part_type; static PyObject *__pyx_n_s_patch; static PyObject *__pyx_n_s_pc; static PyObject *__pyx_n_s_pc_type; static PyObject *__pyx_n_s_pd; static PyObject *__pyx_n_s_periodic; static PyObject *__pyx_n_s_perm; static PyObject *__pyx_n_s_petsc; static PyObject *__pyx_n_s_petsc4py_PETSc; static PyObject *__pyx_n_s_point; static PyObject *__pyx_n_s_points; static PyObject *__pyx_n_s_pop; static PyObject *__pyx_n_s_popErrorHandler; static PyObject *__pyx_n_s_position; static PyObject *__pyx_n_s_positive_definite; static PyObject *__pyx_n_s_poststep; static PyObject *__pyx_n_s_pre; static PyObject *__pyx_n_s_prefix; static PyObject *__pyx_kp_s_prefix_s_name_s; static PyObject *__pyx_n_s_prepare; static PyObject *__pyx_n_s_prestep; static PyObject *__pyx_n_s_proc_sizes; static PyObject *__pyx_n_s_ptype; static PyObject *__pyx_n_s_push; static PyObject *__pyx_n_s_pushErrorHandler; static PyObject *__pyx_n_s_py_type; static PyObject *__pyx_n_s_python; static PyObject *__pyx_n_s_pyx_vtable; static PyObject *__pyx_n_s_q0; static PyObject *__pyx_n_s_q1; static PyObject *__pyx_n_s_qualname; static PyObject *__pyx_n_s_r; static PyObject *__pyx_kp_s_r_2; static PyObject *__pyx_n_s_radius; static PyObject *__pyx_n_s_random; static PyObject *__pyx_n_s_range; static PyObject *__pyx_n_s_rank; static PyObject *__pyx_n_s_readonly; static PyObject *__pyx_kp_s_readonly_attribute; static PyObject *__pyx_n_s_ready; static PyObject *__pyx_n_s_real; static PyObject *__pyx_n_s_reason; static PyObject *__pyx_n_s_reciprocal; static PyObject *__pyx_n_s_refine; static PyObject *__pyx_n_s_refine_x; static PyObject *__pyx_n_s_refine_y; static PyObject *__pyx_n_s_refine_z; static PyObject *__pyx_n_s_refinementLimit; static PyObject *__pyx_n_s_refinementUniform; static PyObject *__pyx_n_s_registerCitation; static PyObject *__pyx_n_s_release; static PyObject *__pyx_n_s_remote; static PyObject *__pyx_n_s_remove; static PyObject *__pyx_n_s_replace; static PyObject *__pyx_n_s_repr; static PyObject *__pyx_n_s_reset; static PyObject *__pyx_n_s_restart; static PyObject *__pyx_n_s_result; static PyObject *__pyx_n_s_reuse; static PyObject *__pyx_n_s_reverse; static PyObject *__pyx_n_s_rhs; static PyObject *__pyx_n_s_right; static PyObject *__pyx_n_s_rmap; static PyObject *__pyx_n_s_rnd_type; static PyObject *__pyx_n_s_rnorm; static PyObject *__pyx_n_s_row; static PyObject *__pyx_n_s_row_bsize; static PyObject *__pyx_kp_s_row_indices_must_have_two_dimens; static PyObject *__pyx_n_s_rowmap; static PyObject *__pyx_n_s_rows; static PyObject *__pyx_n_s_rscale; static PyObject *__pyx_n_s_rtol; static PyObject *__pyx_n_s_rtol_0; static PyObject *__pyx_n_s_rtol_max; static PyObject *__pyx_n_s_rw; static PyObject *__pyx_kp_s_s; static PyObject *__pyx_kp_s_s_line_d_in_s; static PyObject *__pyx_kp_s_s_s; static PyObject *__pyx_n_s_scale; static PyObject *__pyx_n_s_scatter; static PyObject *__pyx_n_s_sec; static PyObject *__pyx_n_s_seconds; static PyObject *__pyx_n_s_seed; static PyObject *__pyx_n_s_self; static PyObject *__pyx_n_s_sep; static PyObject *__pyx_n_s_separable; static PyObject *__pyx_n_s_setActive; static PyObject *__pyx_n_s_setActiveAll; static PyObject *__pyx_n_s_setAppCtx; static PyObject *__pyx_n_s_setConvergedReason; static PyObject *__pyx_n_s_setDM; static PyObject *__pyx_n_s_setDefaultComm; static PyObject *__pyx_n_s_setDiagonal; static PyObject *__pyx_n_s_setDimension; static PyObject *__pyx_n_s_setEquationType; static PyObject *__pyx_n_s_setFunctionTolerances; static PyObject *__pyx_n_s_setInitialGuessKnoll; static PyObject *__pyx_n_s_setInitialGuessNonzero; static PyObject *__pyx_n_s_setInterval; static PyObject *__pyx_n_s_setIterationNumber; static PyObject *__pyx_n_s_setKSP; static PyObject *__pyx_n_s_setMaxFunctionEvaluations; static PyObject *__pyx_n_s_setMaxKSPFailures; static PyObject *__pyx_n_s_setMaxLinearSolveFailures; static PyObject *__pyx_n_s_setMaxNonlinearStepFailures; static PyObject *__pyx_n_s_setMaxStepFailures; static PyObject *__pyx_n_s_setMaxSteps; static PyObject *__pyx_n_s_setMaxTime; static PyObject *__pyx_n_s_setNPC; static PyObject *__pyx_n_s_setName; static PyObject *__pyx_n_s_setNormType; static PyObject *__pyx_n_s_setOptionsPrefix; static PyObject *__pyx_n_s_setPCSide; static PyObject *__pyx_n_s_setParamsEW; static PyObject *__pyx_n_s_setProblemType; static PyObject *__pyx_n_s_setResidualNorm; static PyObject *__pyx_n_s_setSeed; static PyObject *__pyx_n_s_setSizes; static PyObject *__pyx_n_s_setStepNumber; static PyObject *__pyx_n_s_setTime; static PyObject *__pyx_n_s_setTimeStep; static PyObject *__pyx_n_s_setTolerances; static PyObject *__pyx_n_s_setType; static PyObject *__pyx_n_s_setUseEW; static PyObject *__pyx_n_s_setUseFD; static PyObject *__pyx_n_s_setUseMF; static PyObject *__pyx_n_s_setValue; static PyObject *__pyx_n_s_setVisible; static PyObject *__pyx_n_s_setup; static PyObject *__pyx_n_s_sf; static PyObject *__pyx_n_s_sf_type; static PyObject *__pyx_n_s_shape; static PyObject *__pyx_n_s_shift; static PyObject *__pyx_n_s_shift_type; static PyObject *__pyx_n_s_shiftamount; static PyObject *__pyx_n_s_shifttype; static PyObject *__pyx_n_s_side; static PyObject *__pyx_kp_s_side_r_not_understood; static PyObject *__pyx_n_s_size; static PyObject *__pyx_kp_s_size_I_is_d_expected_d; static PyObject *__pyx_kp_s_size_J_is_d_expected_d; static PyObject *__pyx_kp_s_size_V_is_d_expected_d; static PyObject *__pyx_kp_s_size_array_is_d_expected_dx_d_d; static PyObject *__pyx_kp_s_size_d_nnz_is_d_expected_d; static PyObject *__pyx_kp_s_size_o_nnz_is_d_expected_d; static PyObject *__pyx_n_s_sizes; static PyObject *__pyx_kp_s_sizes_array_should_have_d_entrie; static PyObject *__pyx_n_s_sleep; static PyObject *__pyx_n_s_smooths; static PyObject *__pyx_n_s_snes; static PyObject *__pyx_n_s_snes_type; static PyObject *__pyx_n_s_solve; static PyObject *__pyx_n_s_solver; static PyObject *__pyx_n_s_sortype; static PyObject *__pyx_n_s_split; static PyObject *__pyx_n_s_splitOwnership; static PyObject *__pyx_n_s_stage; static PyObject *__pyx_n_s_star; static PyObject *__pyx_n_s_start; static PyObject *__pyx_n_s_starts; static PyObject *__pyx_n_s_startswith; static PyObject *__pyx_n_s_state; static PyObject *__pyx_n_s_stencil_type; static PyObject *__pyx_n_s_stencil_width; static PyObject *__pyx_n_s_step; static PyObject *__pyx_n_s_step_number; static PyObject *__pyx_n_s_stol; static PyObject *__pyx_n_s_stop; static PyObject *__pyx_n_s_str; static PyObject *__pyx_n_s_strides; static PyObject *__pyx_n_s_strip; static PyObject *__pyx_n_s_structure; static PyObject *__pyx_n_s_subcomm; static PyObject *__pyx_n_s_submat; static PyObject *__pyx_n_s_submats; static PyObject *__pyx_n_s_subminor; static PyObject *__pyx_n_s_subvec; static PyObject *__pyx_n_s_supp; static PyObject *__pyx_n_s_svalue; static PyObject *__pyx_n_s_sx; static PyObject *__pyx_n_s_symmetric; static PyObject *__pyx_n_s_syncFlush; static PyObject *__pyx_n_s_syncPrint; static PyObject *__pyx_n_s_t; static PyObject *__pyx_n_s_tab; static PyObject *__pyx_n_s_tao_type; static PyObject *__pyx_n_s_tbline; static PyObject *__pyx_n_s_tblist; static PyObject *__pyx_n_s_theta; static PyObject *__pyx_n_s_threshold; static PyObject *__pyx_n_s_time; static PyObject *__pyx_n_s_time_step; static PyObject *__pyx_n_s_timestep; static PyObject *__pyx_n_s_title; static PyObject *__pyx_n_s_toAll; static PyObject *__pyx_n_s_toZero; static PyObject *__pyx_n_s_tol; static PyObject *__pyx_n_s_traceback; static PyObject *__pyx_n_s_traceback_2; static PyObject *__pyx_n_s_transpose; static PyObject *__pyx_n_s_ts_type; static PyObject *__pyx_n_s_twist; static PyObject *__pyx_n_s_type_registry; static PyObject *__pyx_n_s_typestr; static PyObject *__pyx_n_s_u; static PyObject *__pyx_n_s_ua; static PyObject *__pyx_kp_s_unknown_boundary_type_s; static PyObject *__pyx_kp_s_unknown_element_type_s; static PyObject *__pyx_kp_s_unknown_error_handler_s; static PyObject *__pyx_kp_s_unknown_interpolation_type_s; static PyObject *__pyx_kp_s_unknown_options_s; static PyObject *__pyx_kp_s_unknown_scatter_mode_s; static PyObject *__pyx_kp_s_unknown_shift_type_s; static PyObject *__pyx_kp_s_unknown_stencil_type_s; static PyObject *__pyx_n_s_update; static PyObject *__pyx_n_s_upper; static PyObject *__pyx_n_s_useClosure; static PyObject *__pyx_n_s_useCone; static PyObject *__pyx_n_s_v; static PyObject *__pyx_n_s_val; static PyObject *__pyx_n_s_value; static PyObject *__pyx_n_s_values; static PyObject *__pyx_kp_s_values_must_have_two_or_more_dim; static PyObject *__pyx_n_s_varbounds; static PyObject *__pyx_n_s_vec; static PyObject *__pyx_n_s_vec_from; static PyObject *__pyx_n_s_vec_to; static PyObject *__pyx_n_s_vec_type; static PyObject *__pyx_n_s_vecs; static PyObject *__pyx_n_s_vectors; static PyObject *__pyx_n_s_version; static PyObject *__pyx_n_s_vg; static PyObject *__pyx_n_s_view; static PyObject *__pyx_n_s_viewer; static PyObject *__pyx_n_s_vl; static PyObject *__pyx_n_s_vlg; static PyObject *__pyx_n_s_vn; static PyObject *__pyx_n_s_vwr_type; static PyObject *__pyx_n_s_w; static PyObject *__pyx_kp_s_w_2; static PyObject *__pyx_n_s_width; static PyObject *__pyx_n_s_x; static PyObject *__pyx_n_s_xdot; static PyObject *__pyx_n_s_xl; static PyObject *__pyx_n_s_xmax; static PyObject *__pyx_n_s_xmin; static PyObject *__pyx_n_s_xnorm; static PyObject *__pyx_n_s_xu; static PyObject *__pyx_n_s_y; static PyObject *__pyx_n_s_ymax; static PyObject *__pyx_n_s_ymin; static PyObject *__pyx_n_s_ynorm; static PyObject *__pyx_n_s_zeropivot; static PyObject *__pyx_n_s_zmax; static PyObject *__pyx_n_s_zmin; static PyObject *__pyx_n_s_zoz; static PyObject *__pyx_n_s_zzo; static int __pyx_pf_8petsc4py_5PETSc_10_IS_buffer___cinit__(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self, struct PyPetscISObject *__pyx_v_iset); /* proto */ static void __pyx_pf_8petsc4py_5PETSc_10_IS_buffer_2__dealloc__(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_10_IS_buffer_4__getbuffer__(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self, Py_buffer *__pyx_v_view, int __pyx_v_flags); /* proto */ static void __pyx_pf_8petsc4py_5PETSc_10_IS_buffer_6__releasebuffer__(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self, Py_buffer *__pyx_v_view); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_10_IS_buffer_8__enter__(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_10_IS_buffer_10__exit__(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v_exc); /* proto */ #if PY_MAJOR_VERSION < 3 static Py_ssize_t __pyx_pf_8petsc4py_5PETSc_10_IS_buffer_12__getsegcount__(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self, Py_ssize_t *__pyx_v_lenp); /* proto */ #endif #if PY_MAJOR_VERSION < 3 static Py_ssize_t __pyx_pf_8petsc4py_5PETSc_10_IS_buffer_14__getreadbuffer__(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self, Py_ssize_t __pyx_v_idx, void **__pyx_v_p); /* proto */ #endif static PyObject *__pyx_pf_8petsc4py_5PETSc_10_IS_buffer_19__array_interface_____get__(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_11_Vec_buffer___cinit__(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec, int __pyx_v_readonly); /* proto */ static void __pyx_pf_8petsc4py_5PETSc_11_Vec_buffer_2__dealloc__(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_11_Vec_buffer_4__getbuffer__(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self, Py_buffer *__pyx_v_view, int __pyx_v_flags); /* proto */ static void __pyx_pf_8petsc4py_5PETSc_11_Vec_buffer_6__releasebuffer__(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self, Py_buffer *__pyx_v_view); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11_Vec_buffer_8__enter__(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11_Vec_buffer_10__exit__(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v_exc); /* proto */ #if PY_MAJOR_VERSION < 3 static Py_ssize_t __pyx_pf_8petsc4py_5PETSc_11_Vec_buffer_12__getsegcount__(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self, Py_ssize_t *__pyx_v_lenp); /* proto */ #endif #if PY_MAJOR_VERSION < 3 static Py_ssize_t __pyx_pf_8petsc4py_5PETSc_11_Vec_buffer_14__getreadbuffer__(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self, Py_ssize_t __pyx_v_idx, void **__pyx_v_p); /* proto */ #endif #if PY_MAJOR_VERSION < 3 static Py_ssize_t __pyx_pf_8petsc4py_5PETSc_11_Vec_buffer_16__getwritebuffer__(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self, Py_ssize_t __pyx_v_idx, void **__pyx_v_p); /* proto */ #endif static PyObject *__pyx_pf_8petsc4py_5PETSc_11_Vec_buffer_19__array_interface_____get__(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_14_Vec_LocalForm___init__(struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm *__pyx_v_self, struct PyPetscVecObject *__pyx_v_gvec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_14_Vec_LocalForm_2__enter__(struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_14_Vec_LocalForm_4__exit__(struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v_exc); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_12_Mat_Stencil_1i___set__(struct __pyx_obj_8petsc4py_5PETSc__Mat_Stencil *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_12_Mat_Stencil_1j___set__(struct __pyx_obj_8petsc4py_5PETSc__Mat_Stencil *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_12_Mat_Stencil_1k___set__(struct __pyx_obj_8petsc4py_5PETSc__Mat_Stencil *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_12_Mat_Stencil_1c___set__(struct __pyx_obj_8petsc4py_5PETSc__Mat_Stencil *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_12_Mat_Stencil_5index___set__(struct __pyx_obj_8petsc4py_5PETSc__Mat_Stencil *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_12_Mat_Stencil_5field___set__(struct __pyx_obj_8petsc4py_5PETSc__Mat_Stencil *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_15_DMDA_Vec_array___cinit__(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_v_self, struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_da, struct PyPetscVecObject *__pyx_v_vec, int __pyx_v_DOF); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_15_DMDA_Vec_array_2__getitem__(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_v_self, PyObject *__pyx_v_index); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_15_DMDA_Vec_array_4__setitem__(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_v_self, PyObject *__pyx_v_index, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_15_DMDA_Vec_array_6__enter__(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_15_DMDA_Vec_array_8__exit__(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v_exc); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_15_DMDA_Vec_array_6starts___get__(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_15_DMDA_Vec_array_5sizes___get__(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_15_DMDA_Vec_array_5shape___get__(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_15_DMDA_Vec_array_7strides___get__(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_15_DMDA_Vec_array_5array___get__(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_19_DMComposite_access___cinit__(struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access *__pyx_v_self, struct PyPetscDMObject *__pyx_v_dm, struct PyPetscVecObject *__pyx_v_gvec, PyObject *__pyx_v_locs); /* proto */ static void __pyx_pf_8petsc4py_5PETSc_19_DMComposite_access_2__dealloc__(struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_19_DMComposite_access_4__enter__(struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_19_DMComposite_access_6__exit__(struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v_exc); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5Error___init__(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_self, int __pyx_v_ierr); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5Error_2__nonzero__(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5Error_4__repr__(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5Error_6__str__(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_7Options___init__(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_prefix); /* proto */ static void __pyx_pf_8petsc4py_5PETSc_7Options_2__dealloc__(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_7Options_4__contains__(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_item); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_6__getitem__(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_item); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_7Options_8__setitem__(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_item, PyObject *__pyx_v_value); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_7Options_10__delitem__(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_item); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_6prefix___get__(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_7Options_6prefix_2__set__(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_prefix); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_7Options_6prefix_4__del__(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_12create(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_14destroy(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_16clear(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_18view(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_20setFromOptions(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_22prefixPush(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_prefix); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_24prefixPop(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_26hasName(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_28setValue(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_30delValue(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_32getBool(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_default); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_34getInt(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_default); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_36getReal(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_default); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_38getScalar(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_default); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_40getString(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_default); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Options_42getAll(struct __pyx_obj_8petsc4py_5PETSc_Options *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_getVersion(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_patch, PyObject *__pyx_v_devel, PyObject *__pyx_v_date, PyObject *__pyx_v_author); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_2getVersionInfo(CYTHON_UNUSED PyTypeObject *__pyx_v_cls); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_4isInitialized(CYTHON_UNUSED PyTypeObject *__pyx_v_cls); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_6isFinalized(CYTHON_UNUSED PyTypeObject *__pyx_v_cls); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_8getDefaultComm(CYTHON_UNUSED PyTypeObject *__pyx_v_cls); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_10setDefaultComm(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_12Print(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_14syncPrint(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_16syncFlush(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_18splitOwnership(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_20sleep(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_seconds); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_22pushErrorHandler(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_errhandler); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_24popErrorHandler(CYTHON_UNUSED PyTypeObject *__pyx_v_cls); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_26infoAllow(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Sys_28registerCitation(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_citation); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Log_Stage(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Log_2Class(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Log_4Event(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_name, PyObject *__pyx_v_klass); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Log_6begin(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_all); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Log_8view(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Log_10destroy(CYTHON_UNUSED PyTypeObject *__pyx_v_cls); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Log_12logFlops(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_flops); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Log_14addFlops(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_flops); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Log_16getFlops(CYTHON_UNUSED PyTypeObject *__pyx_v_cls); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Log_18getTime(CYTHON_UNUSED PyTypeObject *__pyx_v_cls); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Log_20getCPUTime(CYTHON_UNUSED PyTypeObject *__pyx_v_cls); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_8LogStage___cinit__(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_2__int__(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_4__enter__(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_6__exit__(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v_exc); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_8push(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_10pop(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_12getName(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_4name___get__(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_8LogStage_4name_2__set__(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_14activate(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_16deactivate(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_18getActive(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_20setActive(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_6active___get__(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_8LogStage_6active_2__set__(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_22getVisible(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_24setVisible(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_7visible___get__(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_8LogStage_7visible_2__set__(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogStage_2id___get__(struct __pyx_obj_8petsc4py_5PETSc_LogStage *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_8LogClass___cinit__(struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogClass_2__int__(struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogClass_4getName(struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogClass_4name___get__(struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_8LogClass_4name_2__set__(struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogClass_6activate(struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogClass_8deactivate(struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogClass_10getActive(struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogClass_12setActive(struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_v_self, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogClass_6active___get__(struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_8LogClass_6active_2__set__(struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogClass_2id___get__(struct __pyx_obj_8petsc4py_5PETSc_LogClass *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_8LogEvent___cinit__(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_2__int__(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_4__enter__(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_6__exit__(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v_exc); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_8begin(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self, PyObject *__pyx_v_objs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_10end(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self, PyObject *__pyx_v_objs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_12barrierBegin(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self, struct PyPetscCommObject *__pyx_v_comm, PyObject *__pyx_v_objs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_14barrierEnd(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self, struct PyPetscCommObject *__pyx_v_comm, PyObject *__pyx_v_objs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_16getName(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_4name___get__(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_8LogEvent_4name_2__set__(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_18activate(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_20deactivate(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_22getActive(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_24setActive(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_6active___get__(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_8LogEvent_6active_2__set__(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_26getActiveAll(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_28setActiveAll(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_10active_all___get__(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_8LogEvent_10active_all_2__set__(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_30getPerfInfo(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self, PyObject *__pyx_v_stage); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_8LogEvent_2id___get__(struct __pyx_obj_8petsc4py_5PETSc_LogEvent *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4Comm___cinit__(struct PyPetscCommObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static void __pyx_pf_8petsc4py_5PETSc_4Comm_2__dealloc__(struct PyPetscCommObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4Comm_4__richcmp__(PyObject *__pyx_v_self, PyObject *__pyx_v_other, int __pyx_v_op); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4Comm_6__nonzero__(struct PyPetscCommObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4Comm_8destroy(struct PyPetscCommObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4Comm_10duplicate(struct PyPetscCommObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4Comm_12getSize(struct PyPetscCommObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4Comm_14getRank(struct PyPetscCommObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4Comm_16barrier(struct PyPetscCommObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4Comm_4size___get__(struct PyPetscCommObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4Comm_4rank___get__(struct PyPetscCommObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4Comm_7fortran___get__(struct PyPetscCommObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4Comm_18tompi4py(struct PyPetscCommObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_6Object___cinit__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static void __pyx_pf_8petsc4py_5PETSc_6Object_2__dealloc__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_4__richcmp__(PyObject *__pyx_v_self, PyObject *__pyx_v_other, int __pyx_v_op); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_6Object_6__nonzero__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_8__copy__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_10__deepcopy__(struct PyPetscObjectObject *__pyx_v_self, PyObject *__pyx_v_memo); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_12view(struct PyPetscObjectObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_14destroy(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_16getType(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_18setOptionsPrefix(struct PyPetscObjectObject *__pyx_v_self, PyObject *__pyx_v_prefix); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_20getOptionsPrefix(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_22setFromOptions(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_24getComm(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_26getName(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_28setName(struct PyPetscObjectObject *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_30getClassId(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_32getClassName(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_34getRefCount(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_36compose(struct PyPetscObjectObject *__pyx_v_self, PyObject *__pyx_v_name, struct PyPetscObjectObject *__pyx_v_obj); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_38query(struct PyPetscObjectObject *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_40incRef(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_42decRef(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_44getAttr(struct PyPetscObjectObject *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_46setAttr(struct PyPetscObjectObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_attr); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_48getDict(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_50stateIncrease(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_52incrementTabLevel(struct PyPetscObjectObject *__pyx_v_self, PyObject *__pyx_v_tab, struct PyPetscObjectObject *__pyx_v_parent); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_54setTabLevel(struct PyPetscObjectObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_56getTabLevel(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_4type___get__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_6Object_4type_2__set__(struct PyPetscObjectObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_6prefix___get__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_6Object_6prefix_2__set__(struct PyPetscObjectObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_4comm___get__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_4name___get__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_6Object_4name_2__set__(struct PyPetscObjectObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_7classid___get__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_5klass___get__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_8refcount___get__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_6handle___get__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Object_7fortran___get__(struct PyPetscObjectObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_6Viewer___cinit__(struct PyPetscViewerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_2__call__(struct PyPetscViewerObject *__pyx_v_self, struct PyPetscObjectObject *__pyx_v_obj); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_4view(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_obj); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_6destroy(struct PyPetscViewerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_8create(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_10createASCII(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_mode, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_12createBinary(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_mode, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_14createMPIIO(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_mode, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_16createVTK(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_mode, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_18createHDF5(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_mode, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_20createNetCDF(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_mode, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_22createDraw(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_display, PyObject *__pyx_v_title, PyObject *__pyx_v_position, PyObject *__pyx_v_size, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_24setType(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_vwr_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_26getType(struct PyPetscViewerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_28getFormat(struct PyPetscViewerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_30pushFormat(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_format); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_32popFormat(struct PyPetscViewerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_34STDOUT(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_36STDERR(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_38ASCII(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_name, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_40BINARY(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_42DRAW(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_44flush(struct PyPetscViewerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_46setFileMode(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_mode); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_48getFileMode(struct PyPetscViewerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_50setFileName(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_52getFileName(struct PyPetscViewerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_54setDrawInfo(struct PyPetscViewerObject *__pyx_v_self, PyObject *__pyx_v_display, PyObject *__pyx_v_title, PyObject *__pyx_v_position, PyObject *__pyx_v_size); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Viewer_56clearDraw(struct PyPetscViewerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_10ViewerHDF5_create(struct __pyx_obj_8petsc4py_5PETSc_ViewerHDF5 *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_mode, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_10ViewerHDF5_2getTimestep(struct __pyx_obj_8petsc4py_5PETSc_ViewerHDF5 *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_10ViewerHDF5_4setTimestep(struct __pyx_obj_8petsc4py_5PETSc_ViewerHDF5 *__pyx_v_self, PyObject *__pyx_v_timestep); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_10ViewerHDF5_6incrementTimestep(struct __pyx_obj_8petsc4py_5PETSc_ViewerHDF5 *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_10ViewerHDF5_8pushGroup(struct __pyx_obj_8petsc4py_5PETSc_ViewerHDF5 *__pyx_v_self, PyObject *__pyx_v_group); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_10ViewerHDF5_10popGroup(struct __pyx_obj_8petsc4py_5PETSc_ViewerHDF5 *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_10ViewerHDF5_12getGroup(struct __pyx_obj_8petsc4py_5PETSc_ViewerHDF5 *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_6Random___cinit__(struct PyPetscRandomObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_2__call__(struct PyPetscRandomObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_4view(struct PyPetscRandomObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_6destroy(struct PyPetscRandomObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_8create(struct PyPetscRandomObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_10setType(struct PyPetscRandomObject *__pyx_v_self, PyObject *__pyx_v_rnd_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_12getType(struct PyPetscRandomObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_14setFromOptions(struct PyPetscRandomObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_16getValue(struct PyPetscRandomObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_18getValueReal(struct PyPetscRandomObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_20getSeed(struct PyPetscRandomObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_22setSeed(struct PyPetscRandomObject *__pyx_v_self, PyObject *__pyx_v_seed); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_24getInterval(struct PyPetscRandomObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_26setInterval(struct PyPetscRandomObject *__pyx_v_self, PyObject *__pyx_v_interval); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_4seed___get__(struct PyPetscRandomObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_6Random_4seed_2__set__(struct PyPetscRandomObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6Random_8interval___get__(struct PyPetscRandomObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_6Random_8interval_2__set__(struct PyPetscRandomObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2IS___cinit__(struct PyPetscISObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2IS_2__getbuffer__(struct PyPetscISObject *__pyx_v_self, Py_buffer *__pyx_v_view, int __pyx_v_flags); /* proto */ static void __pyx_pf_8petsc4py_5PETSc_2IS_4__releasebuffer__(struct PyPetscISObject *__pyx_v_self, Py_buffer *__pyx_v_view); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_6__enter__(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_8__exit__(struct PyPetscISObject *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v_exc); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_10view(struct PyPetscISObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_12destroy(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_14create(struct PyPetscISObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_16setType(struct PyPetscISObject *__pyx_v_self, PyObject *__pyx_v_is_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_18getType(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_20createGeneral(struct PyPetscISObject *__pyx_v_self, PyObject *__pyx_v_indices, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_22createBlock(struct PyPetscISObject *__pyx_v_self, PyObject *__pyx_v_bsize, PyObject *__pyx_v_indices, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_24createStride(struct PyPetscISObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_first, PyObject *__pyx_v_step, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_26duplicate(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_28copy(struct PyPetscISObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_result); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_30load(struct PyPetscISObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_32allGather(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_34toGeneral(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_36invertPermutation(struct PyPetscISObject *__pyx_v_self, PyObject *__pyx_v_nlocal); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_38getSize(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_40getLocalSize(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_42getSizes(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_44getBlockSize(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_46setBlockSize(struct PyPetscISObject *__pyx_v_self, PyObject *__pyx_v_bs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_48sort(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_50isSorted(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_52setPermutation(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_54isPermutation(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_56setIdentity(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_58isIdentity(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_60equal(struct PyPetscISObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_iset); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_62sum(struct PyPetscISObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_iset); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_64expand(struct PyPetscISObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_iset); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_66union(struct PyPetscISObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_iset); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_68difference(struct PyPetscISObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_iset); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_70complement(struct PyPetscISObject *__pyx_v_self, PyObject *__pyx_v_nmin, PyObject *__pyx_v_nmax); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_72embed(struct PyPetscISObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_iset, PyObject *__pyx_v_drop); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_74setIndices(struct PyPetscISObject *__pyx_v_self, PyObject *__pyx_v_indices); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_76getIndices(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_78setBlockIndices(struct PyPetscISObject *__pyx_v_self, PyObject *__pyx_v_bsize, PyObject *__pyx_v_indices); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_80getBlockIndices(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_82setStride(struct PyPetscISObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_first, PyObject *__pyx_v_step); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_84getStride(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_86getInfo(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_11permutation___get__(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_8identity___get__(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_6sorted___get__(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_5sizes___get__(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_4size___get__(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_10local_size___get__(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_10block_size___get__(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_7indices___get__(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_5array___get__(struct PyPetscISObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2IS_19__array_interface_____get__(struct PyPetscISObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_5LGMap___cinit__(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_2__call__(struct PyPetscLGMapObject *__pyx_v_self, PyObject *__pyx_v_indices, PyObject *__pyx_v_result); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_4view(struct PyPetscLGMapObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_6destroy(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_8create(struct PyPetscLGMapObject *__pyx_v_self, PyObject *__pyx_v_indices, PyObject *__pyx_v_bsize, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_10createIS(struct PyPetscLGMapObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_iset); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_12createSF(struct PyPetscLGMapObject *__pyx_v_self, struct PyPetscSFObject *__pyx_v_sf, PyObject *__pyx_v_start); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_14getSize(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_16getBlockSize(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_18getIndices(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_20getBlockIndices(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_22getInfo(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_24getBlockInfo(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_26apply(struct PyPetscLGMapObject *__pyx_v_self, PyObject *__pyx_v_indices, PyObject *__pyx_v_result); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_28applyBlock(struct PyPetscLGMapObject *__pyx_v_self, PyObject *__pyx_v_indices, PyObject *__pyx_v_result); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_30applyIS(struct PyPetscLGMapObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_iset); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_32applyInverse(struct PyPetscLGMapObject *__pyx_v_self, PyObject *__pyx_v_indices, PyObject *__pyx_v_map_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_34applyBlockInverse(struct PyPetscLGMapObject *__pyx_v_self, PyObject *__pyx_v_indices, PyObject *__pyx_v_map_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_4size___get__(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_10block_size___get__(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_7indices___get__(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_13block_indices___get__(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_4info___get__(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_5LGMap_10block_info___get__(struct PyPetscLGMapObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3Vec___cinit__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_2__pos__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_4__neg__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_6__abs__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_8__iadd__(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_10__isub__(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_12__imul__(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_14__idiv__(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ #endif static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_16__itruediv__(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_18__add__(PyObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_20__sub__(PyObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_22__mul__(PyObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_24__div__(PyObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ #endif static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_26__truediv__(PyObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_28__getitem__(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_i); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3Vec_30__setitem__(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_i, PyObject *__pyx_v_v); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3Vec_32__getbuffer__(struct PyPetscVecObject *__pyx_v_self, Py_buffer *__pyx_v_view, int __pyx_v_flags); /* proto */ static void __pyx_pf_8petsc4py_5PETSc_3Vec_34__releasebuffer__(struct PyPetscVecObject *__pyx_v_self, Py_buffer *__pyx_v_view); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_36__enter__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_38__exit__(struct PyPetscVecObject *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v_exc); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_40view(struct PyPetscVecObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_42destroy(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_44create(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_46setType(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_vec_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_48setSizes(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_50createSeq(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_52createMPI(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_54createWithArray(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_array, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_56createGhost(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_ghosts, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_58createGhostWithArray(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_ghosts, PyObject *__pyx_v_array, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_60createShared(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_62createNest(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_vecs, PyObject *__pyx_v_isets, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_64setOptionsPrefix(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_prefix); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_66getOptionsPrefix(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_68setFromOptions(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_70setUp(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_72setOption(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_option, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_74getType(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_76getSize(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_78getLocalSize(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_80getSizes(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_82setBlockSize(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_bsize); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_84getBlockSize(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_86getOwnershipRange(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_88getOwnershipRanges(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_90getBuffer(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_readonly); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_92getArray(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_readonly); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_94setArray(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_array); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_96placeArray(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_array); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_98resetArray(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_force); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_100getCUDAHandle(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_mode); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_102restoreCUDAHandle(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_handle, PyObject *__pyx_v_mode); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_104duplicate(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_array); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_106copy(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_result); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_108chop(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_tol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_110load(struct PyPetscVecObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_112equal(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_114dot(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_116dotBegin(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_118dotEnd(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_120tDot(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_122tDotBegin(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_124tDotEnd(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_126mDot(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_vecs, PyObject *__pyx_v_out); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_128mDotBegin(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_vecs, PyObject *__pyx_v_out); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_130mDotEnd(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_vecs, PyObject *__pyx_v_out); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_132mtDot(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_vecs, PyObject *__pyx_v_out); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_134mtDotBegin(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_vecs, PyObject *__pyx_v_out); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_136mtDotEnd(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_vecs, PyObject *__pyx_v_out); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_138norm(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_norm_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_140normBegin(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_norm_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_142normEnd(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_norm_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_144sum(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_146min(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_148max(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_150normalize(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_152reciprocal(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_154exp(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_156log(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_158sqrtabs(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_160abs(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_162conjugate(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_164setRandom(struct PyPetscVecObject *__pyx_v_self, struct PyPetscRandomObject *__pyx_v_random); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_166permute(struct PyPetscVecObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_order, PyObject *__pyx_v_invert); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_168zeroEntries(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_170set(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_alpha); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_172isset(struct PyPetscVecObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_idx, PyObject *__pyx_v_alpha); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_174scale(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_alpha); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_176shift(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_alpha); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_178chop(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_tol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_180swap(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_182axpy(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_alpha, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_184isaxpy(struct PyPetscVecObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_idx, PyObject *__pyx_v_alpha, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_186aypx(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_alpha, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_188axpby(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_alpha, PyObject *__pyx_v_beta, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_190waxpy(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_alpha, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_192maxpy(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_alphas, PyObject *__pyx_v_vecs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_194pointwiseMult(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_196pointwiseDivide(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_198pointwiseMin(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_200pointwiseMax(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_202pointwiseMaxAbs(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_204maxPointwiseDivide(struct PyPetscVecObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_206getValue(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_index); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_208getValues(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_indices, PyObject *__pyx_v_values); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_210setValue(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_index, PyObject *__pyx_v_value, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_212setValues(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_indices, PyObject *__pyx_v_values, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_214setValuesBlocked(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_indices, PyObject *__pyx_v_values, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_216setLGMap(struct PyPetscVecObject *__pyx_v_self, struct PyPetscLGMapObject *__pyx_v_lgmap); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_218setValueLocal(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_index, PyObject *__pyx_v_value, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_220setValuesLocal(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_indices, PyObject *__pyx_v_values, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_222setValuesBlockedLocal(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_indices, PyObject *__pyx_v_values, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_224assemblyBegin(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_226assemblyEnd(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_228assemble(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_230strideScale(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_field, PyObject *__pyx_v_alpha); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_232strideSum(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_field); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_234strideMin(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_field); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_236strideMax(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_field); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_238strideNorm(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_field, PyObject *__pyx_v_norm_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_240strideScatter(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_field, struct PyPetscVecObject *__pyx_v_vec, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_242strideGather(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_field, struct PyPetscVecObject *__pyx_v_vec, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_244localForm(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_246ghostUpdateBegin(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_addv, PyObject *__pyx_v_mode); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_248ghostUpdateEnd(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_addv, PyObject *__pyx_v_mode); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_250ghostUpdate(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_addv, PyObject *__pyx_v_mode); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_252setMPIGhost(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_ghosts); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_254getSubVector(struct PyPetscVecObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_iset, struct PyPetscVecObject *__pyx_v_subvec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_256restoreSubVector(struct PyPetscVecObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_iset, struct PyPetscVecObject *__pyx_v_subvec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_258getNestSubVecs(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_260setNestSubVecs(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_sx, PyObject *__pyx_v_idxm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_5sizes___get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3Vec_5sizes_2__set__(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_4size___get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_10local_size___get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_10block_size___get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_11owner_range___get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_12owner_ranges___get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_8buffer_w___get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_8buffer_r___get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_7array_w___get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3Vec_7array_w_2__set__(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_7array_r___get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_6buffer___get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_5array___get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3Vec_5array_2__set__(struct PyPetscVecObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Vec_19__array_interface_____get__(struct PyPetscVecObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_7Scatter___cinit__(struct PyPetscScatterObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Scatter_2__call__(struct PyPetscScatterObject *__pyx_v_self, PyObject *__pyx_v_x, PyObject *__pyx_v_y, PyObject *__pyx_v_addv, PyObject *__pyx_v_mode); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Scatter_4view(struct PyPetscScatterObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Scatter_6destroy(struct PyPetscScatterObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Scatter_8create(struct PyPetscScatterObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec_from, struct PyPetscISObject *__pyx_v_is_from, struct PyPetscVecObject *__pyx_v_vec_to, struct PyPetscISObject *__pyx_v_is_to); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Scatter_10copy(struct PyPetscScatterObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Scatter_12toAll(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Scatter_14toZero(CYTHON_UNUSED PyTypeObject *__pyx_v_cls, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Scatter_16begin(struct PyPetscScatterObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec_from, struct PyPetscVecObject *__pyx_v_vec_to, PyObject *__pyx_v_addv, PyObject *__pyx_v_mode); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Scatter_18end(struct PyPetscScatterObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec_from, struct PyPetscVecObject *__pyx_v_vec_to, PyObject *__pyx_v_addv, PyObject *__pyx_v_mode); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Scatter_20scatterBegin(struct PyPetscScatterObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec_from, struct PyPetscVecObject *__pyx_v_vec_to, PyObject *__pyx_v_addv, PyObject *__pyx_v_mode); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Scatter_22scatterEnd(struct PyPetscScatterObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec_from, struct PyPetscVecObject *__pyx_v_vec_to, PyObject *__pyx_v_addv, PyObject *__pyx_v_mode); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Scatter_24scatter(struct PyPetscScatterObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec_from, struct PyPetscVecObject *__pyx_v_vec_to, PyObject *__pyx_v_addv, PyObject *__pyx_v_mode); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_7Section___cinit__(struct PyPetscSectionObject *__pyx_v_self); /* proto */ static void __pyx_pf_8petsc4py_5PETSc_7Section_2__dealloc__(struct PyPetscSectionObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_4view(struct PyPetscSectionObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_6destroy(struct PyPetscSectionObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_8create(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_10clone(struct PyPetscSectionObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_12setUp(struct PyPetscSectionObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_14reset(struct PyPetscSectionObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_16getNumFields(struct PyPetscSectionObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_18setNumFields(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_numFields); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_20getFieldName(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_field); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_22setFieldName(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_field, PyObject *__pyx_v_fieldName); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_24getFieldComponents(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_field); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_26setFieldComponents(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_field, PyObject *__pyx_v_numComp); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_28getChart(struct PyPetscSectionObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_30setChart(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_pStart, PyObject *__pyx_v_pEnd); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_32getDof(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_34setDof(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_numDof); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_36addDof(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_numDof); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_38getFieldDof(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_field); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_40setFieldDof(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_field, PyObject *__pyx_v_numDof); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_42addFieldDof(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_field, PyObject *__pyx_v_numDof); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_44getConstraintDof(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_46setConstraintDof(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_numDof); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_48addConstraintDof(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_numDof); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_50getFieldConstraintDof(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_field); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_52setFieldConstraintDof(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_field, PyObject *__pyx_v_numDof); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_54addFieldConstraintDof(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_field, PyObject *__pyx_v_numDof); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_56getConstraintIndices(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_58setConstraintIndices(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_indices); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_60getFieldConstraintIndices(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_field); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_62setFieldConstraintIndices(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_field, PyObject *__pyx_v_indices); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_64getMaxDof(struct PyPetscSectionObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_66getStorageSize(struct PyPetscSectionObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_68getConstrainedStorageSize(struct PyPetscSectionObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_70getOffset(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_72setOffset(struct PyPetscSectionObject *__pyx_v_self, PyObject *__pyx_v_point, PyObject *__pyx_v_offset); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_74getOffsetRange(struct PyPetscSectionObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7Section_76createGlobalSection(struct PyPetscSectionObject *__pyx_v_self, struct PyPetscSFObject *__pyx_v_sf); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3Mat___cinit__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_2__pos__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_4__neg__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_6__iadd__(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_8__isub__(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_10__imul__(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_12__idiv__(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ #endif static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_14__itruediv__(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_16__add__(PyObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_18__sub__(PyObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_20__mul__(PyObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_22__div__(PyObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ #endif static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_24__truediv__(PyObject *__pyx_v_self, PyObject *__pyx_v_other); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_26__getitem__(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_ij); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3Mat_28__setitem__(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_ij, PyObject *__pyx_v_v); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_30__call__(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_x, PyObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_32view(struct PyPetscMatObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_34destroy(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_36create(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_38setType(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_mat_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_40setSizes(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_42setBlockSize(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_bsize); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_44setBlockSizes(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_row_bsize, PyObject *__pyx_v_col_bsize); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_46createAIJ(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize, PyObject *__pyx_v_nnz, PyObject *__pyx_v_csr, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_48createBAIJ(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize, PyObject *__pyx_v_nnz, PyObject *__pyx_v_csr, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_50createSBAIJ(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize, PyObject *__pyx_v_nnz, PyObject *__pyx_v_csr, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_52createAIJCRL(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize, PyObject *__pyx_v_nnz, PyObject *__pyx_v_csr, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_54setPreallocationNNZ(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_nnz); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_56setPreallocationCSR(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_csr); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_58createAIJWithArrays(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_csr, PyObject *__pyx_v_bsize, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_60createDense(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_bsize, PyObject *__pyx_v_array, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_62setPreallocationDense(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_array); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_64createScatter(struct PyPetscMatObject *__pyx_v_self, struct PyPetscScatterObject *__pyx_v_scatter, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_66createNormal(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_68createTranspose(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_70createLRC(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_A, struct PyPetscMatObject *__pyx_v_U, struct PyPetscMatObject *__pyx_v_V); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_72createSubMatrix(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_A, struct PyPetscISObject *__pyx_v_isrow, struct PyPetscISObject *__pyx_v_iscol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_74createNest(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_mats, PyObject *__pyx_v_isrows, PyObject *__pyx_v_iscols, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_76createPython(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_size, PyObject *__pyx_v_context, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_78setPythonContext(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_context); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_80getPythonContext(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_82setPythonType(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_py_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_84setOptionsPrefix(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_prefix); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_86getOptionsPrefix(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_88setFromOptions(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_90setUp(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_92setOption(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_option, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_94getType(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_96getSize(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_98getLocalSize(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_100getSizes(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_102getBlockSize(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_104getBlockSizes(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_106getOwnershipRange(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_108getOwnershipRanges(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_110getOwnershipRangeColumn(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_112getOwnershipRangesColumn(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_114getOwnershipIS(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_116getInfo(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_info); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_118duplicate(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_copy); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_120copy(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_result, PyObject *__pyx_v_structure); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_122load(struct PyPetscMatObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_124convert(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_mat_type, struct PyPetscMatObject *__pyx_v_out); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_126transpose(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_out); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_128realPart(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_out); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_130imagPart(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_out); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_132conjugate(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_out); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_134permute(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_row, struct PyPetscISObject *__pyx_v_col); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_136equal(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_138isTranspose(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat, PyObject *__pyx_v_tol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_140isSymmetric(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_tol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_142isSymmetricKnown(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_144isHermitian(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_tol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_146isHermitianKnown(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_148isStructurallySymmetric(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_150zeroEntries(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_152getValue(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_row, PyObject *__pyx_v_col); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_154getValues(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_rows, PyObject *__pyx_v_cols, PyObject *__pyx_v_values); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_156getValuesCSR(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_158getRow(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_row); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_160getRowIJ(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_symmetric, PyObject *__pyx_v_compressed); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_162getColumnIJ(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_symmetric, PyObject *__pyx_v_compressed); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_164setValue(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_row, PyObject *__pyx_v_col, PyObject *__pyx_v_value, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_166setValues(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_rows, PyObject *__pyx_v_cols, PyObject *__pyx_v_values, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_168setValuesRCV(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_R, PyObject *__pyx_v_C, PyObject *__pyx_v_V, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_170setValuesIJV(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_I, PyObject *__pyx_v_J, PyObject *__pyx_v_V, PyObject *__pyx_v_addv, PyObject *__pyx_v_rowmap); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_172setValuesCSR(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_I, PyObject *__pyx_v_J, PyObject *__pyx_v_V, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_174setValuesBlocked(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_rows, PyObject *__pyx_v_cols, PyObject *__pyx_v_values, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_176setValuesBlockedRCV(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_R, PyObject *__pyx_v_C, PyObject *__pyx_v_V, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_178setValuesBlockedIJV(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_I, PyObject *__pyx_v_J, PyObject *__pyx_v_V, PyObject *__pyx_v_addv, PyObject *__pyx_v_rowmap); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_180setValuesBlockedCSR(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_I, PyObject *__pyx_v_J, PyObject *__pyx_v_V, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_182setLGMap(struct PyPetscMatObject *__pyx_v_self, struct PyPetscLGMapObject *__pyx_v_rmap, struct PyPetscLGMapObject *__pyx_v_cmap); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_184setValueLocal(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_row, PyObject *__pyx_v_col, PyObject *__pyx_v_value, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_186setValuesLocal(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_rows, PyObject *__pyx_v_cols, PyObject *__pyx_v_values, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_188setValuesLocalRCV(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_R, PyObject *__pyx_v_C, PyObject *__pyx_v_V, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_190setValuesLocalIJV(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_I, PyObject *__pyx_v_J, PyObject *__pyx_v_V, PyObject *__pyx_v_addv, PyObject *__pyx_v_rowmap); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_192setValuesLocalCSR(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_I, PyObject *__pyx_v_J, PyObject *__pyx_v_V, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_194setValuesBlockedLocal(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_rows, PyObject *__pyx_v_cols, PyObject *__pyx_v_values, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_196setValuesBlockedLocalRCV(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_R, PyObject *__pyx_v_C, PyObject *__pyx_v_V, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_198setValuesBlockedLocalIJV(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_I, PyObject *__pyx_v_J, PyObject *__pyx_v_V, PyObject *__pyx_v_addv, PyObject *__pyx_v_rowmap); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_200setValuesBlockedLocalCSR(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_I, PyObject *__pyx_v_J, PyObject *__pyx_v_V, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_202setStencil(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_dims, PyObject *__pyx_v_starts, PyObject *__pyx_v_dof); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_204setValueStencil(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_row, PyObject *__pyx_v_col, PyObject *__pyx_v_value, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_206setValueBlockedStencil(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_row, PyObject *__pyx_v_col, PyObject *__pyx_v_value, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_208zeroRows(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_rows, PyObject *__pyx_v_diag, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_b); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_210zeroRowsLocal(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_rows, PyObject *__pyx_v_diag, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_b); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_212zeroRowsColumns(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_rows, PyObject *__pyx_v_diag, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_b); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_214storeValues(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_216retrieveValues(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_218assemblyBegin(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_assembly); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_220assemblyEnd(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_assembly); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_222assemble(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_assembly); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_224isAssembled(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_226createVecs(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_side); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_228createVecRight(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_230createVecLeft(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_232getColumnVector(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_column, struct PyPetscVecObject *__pyx_v_result); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_234getRedundantMatrix(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_nsubcomm, PyObject *__pyx_v_subcomm, struct PyPetscMatObject *__pyx_v_out); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_236getDiagonal(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_result); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_238getRowSum(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_result); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_240setDiagonal(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_diag, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_242diagonalScale(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_L, struct PyPetscVecObject *__pyx_v_R); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_244invertBlockDiagonal(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_246setNullSpace(struct PyPetscMatObject *__pyx_v_self, struct PyPetscNullSpaceObject *__pyx_v_nsp); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_248getNullSpace(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_250setNearNullSpace(struct PyPetscMatObject *__pyx_v_self, struct PyPetscNullSpaceObject *__pyx_v_nsp); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_252getNearNullSpace(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_254mult(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_256multAdd(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_v, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_258multTranspose(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_260multTransposeAdd(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_v, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_262multHermitian(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_264multHermitianAdd(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_v, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_266SOR(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_b, struct PyPetscVecObject *__pyx_v_x, PyObject *__pyx_v_omega, PyObject *__pyx_v_sortype, PyObject *__pyx_v_shift, PyObject *__pyx_v_its, PyObject *__pyx_v_lits); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_268getDiagonalBlock(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_270increaseOverlap(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_iset, PyObject *__pyx_v_overlap); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_272getSubMatrix(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_isrow, struct PyPetscISObject *__pyx_v_iscol, struct PyPetscMatObject *__pyx_v_submat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_274getSubMatrices(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_isrows, PyObject *__pyx_v_iscols, PyObject *__pyx_v_submats); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_276getLocalSubMatrix(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_isrow, struct PyPetscISObject *__pyx_v_iscol, struct PyPetscMatObject *__pyx_v_submat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_278restoreLocalSubMatrix(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_isrow, struct PyPetscISObject *__pyx_v_iscol, struct PyPetscMatObject *__pyx_v_submat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_280norm(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_norm_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_282scale(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_alpha); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_284shift(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_alpha); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_286chop(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_tol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_288axpy(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_alpha, struct PyPetscMatObject *__pyx_v_X, PyObject *__pyx_v_structure); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_290aypx(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_alpha, struct PyPetscMatObject *__pyx_v_X, PyObject *__pyx_v_structure); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_292matMultSymbolic(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat, PyObject *__pyx_v_fill); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_294matMultNumeric(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat, struct PyPetscMatObject *__pyx_v_result); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_296matMult(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat, struct PyPetscMatObject *__pyx_v_result, PyObject *__pyx_v_fill); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_298matTransposeMult(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat, struct PyPetscMatObject *__pyx_v_result, PyObject *__pyx_v_fill); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_300transposeMatMult(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat, struct PyPetscMatObject *__pyx_v_result, PyObject *__pyx_v_fill); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_302getOrdering(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_ord_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_304reorderForNonzeroDiagonal(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_isrow, struct PyPetscISObject *__pyx_v_iscol, PyObject *__pyx_v_atol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_306factorLU(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_isrow, struct PyPetscISObject *__pyx_v_iscol, PyObject *__pyx_v_options); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_308factorSymbolicLU(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat, struct PyPetscISObject *__pyx_v_isrow, struct PyPetscISObject *__pyx_v_iscol, PyObject *__pyx_v_options); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_310factorNumericLU(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat, PyObject *__pyx_v_options); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_312factorILU(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_isrow, struct PyPetscISObject *__pyx_v_iscol, PyObject *__pyx_v_options); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_314factorSymbolicILU(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_isrow, struct PyPetscISObject *__pyx_v_iscol, PyObject *__pyx_v_options); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_316factorCholesky(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_isperm, PyObject *__pyx_v_options); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_318factorSymbolicCholesky(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_isperm, PyObject *__pyx_v_options); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_320factorNumericCholesky(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat, PyObject *__pyx_v_options); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_322factorICC(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_isperm, PyObject *__pyx_v_options); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_324factorSymbolicICC(struct PyPetscMatObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_isperm, PyObject *__pyx_v_options); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_326getInertia(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_328setUnfactored(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_330setMumpsIcntl(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_icntl, PyObject *__pyx_v_ival); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_332getMumpsIcntl(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_icntl); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_334setMumpsCntl(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_icntl, PyObject *__pyx_v_val); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_336getMumpsCntl(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_icntl); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_338getMumpsInfo(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_icntl); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_340getMumpsInfog(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_icntl); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_342getMumpsRinfo(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_icntl); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_344getMumpsRinfog(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_icntl); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_346solveForward(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_b, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_348solveBackward(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_b, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_350solve(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_b, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_352solveTranspose(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_b, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_354solveAdd(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_b, struct PyPetscVecObject *__pyx_v_y, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_356solveTransposeAdd(struct PyPetscMatObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_b, struct PyPetscVecObject *__pyx_v_y, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_358matSolve(struct PyPetscMatObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_B, struct PyPetscMatObject *__pyx_v_X); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_360getDenseArray(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_362getDenseLocalMatrix(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_5sizes___get__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3Mat_5sizes_2__set__(struct PyPetscMatObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_4size___get__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_10local_size___get__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_10block_size___get__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_11block_sizes___get__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_11owner_range___get__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_12owner_ranges___get__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_9assembled___get__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_9symmetric___get__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_9hermitian___get__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3Mat_10structsymm___get__(struct PyPetscMatObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_9NullSpace___cinit__(struct PyPetscNullSpaceObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_9NullSpace_2__call__(struct PyPetscNullSpaceObject *__pyx_v_self, PyObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_9NullSpace_4view(struct PyPetscNullSpaceObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_9NullSpace_6destroy(struct PyPetscNullSpaceObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_9NullSpace_8create(struct PyPetscNullSpaceObject *__pyx_v_self, PyObject *__pyx_v_constant, PyObject *__pyx_v_vectors, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_9NullSpace_10createRigidBody(struct PyPetscNullSpaceObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_coords); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_9NullSpace_12setFunction(struct PyPetscNullSpaceObject *__pyx_v_self, PyObject *__pyx_v_function, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_9NullSpace_14hasConstant(struct PyPetscNullSpaceObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_9NullSpace_16getVecs(struct PyPetscNullSpaceObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_9NullSpace_18getFunction(struct PyPetscNullSpaceObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_9NullSpace_20remove(struct PyPetscNullSpaceObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2PC___cinit__(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_2__call__(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_x, PyObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_4view(struct PyPetscPCObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_6destroy(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_8create(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_10setType(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_pc_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_12getType(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_14setOptionsPrefix(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_prefix); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_16getOptionsPrefix(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_18setFromOptions(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_20setOperators(struct PyPetscPCObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_A, struct PyPetscMatObject *__pyx_v_P); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_22getOperators(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_24setUseAmat(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_26setUp(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_28reset(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_30setUpOnBlocks(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_32apply(struct PyPetscPCObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_34applyTranspose(struct PyPetscPCObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_36applySymmetricLeft(struct PyPetscPCObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_38applySymmetricRight(struct PyPetscPCObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_y); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_40getDM(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_42setDM(struct PyPetscPCObject *__pyx_v_self, struct PyPetscDMObject *__pyx_v_dm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_44setCoordinates(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_coordinates); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_46createPython(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_context, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_48setPythonContext(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_context); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_50getPythonContext(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_52setPythonType(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_py_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_54setASMType(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_asmtype); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_56setASMOverlap(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_overlap); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_58setASMLocalSubdomains(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_nsd); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_60setASMTotalSubdomains(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_nsd); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_62getASMSubKSP(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_64setGASMType(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_gasmtype); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_66setGASMOverlap(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_overlap); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_68setGAMGType(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_gamgtype); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_70setGAMGLevels(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_levels); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_72setGAMGSmooths(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_smooths); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_74getHYPREType(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_76setHYPREType(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_hypretype); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_78setHYPREDiscreteCurl(struct PyPetscPCObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_80setHYPREDiscreteGradient(struct PyPetscPCObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_82setHYPRESetAlphaPoissonMatrix(struct PyPetscPCObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_84setHYPRESetBetaPoissonMatrix(struct PyPetscPCObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_86setHYPRESetEdgeConstantVectors(struct PyPetscPCObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_ozz, struct PyPetscVecObject *__pyx_v_zoz, struct PyPetscVecObject *__pyx_v_zzo); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_88setFactorSolverPackage(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_solver); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_90getFactorSolverPackage(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_92setFactorOrdering(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_ord_type, PyObject *__pyx_v_nzdiag, PyObject *__pyx_v_reuse); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_94setFactorPivot(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_zeropivot, PyObject *__pyx_v_inblocks); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_96setFactorShift(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_shift_type, PyObject *__pyx_v_amount); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_98setFactorLevels(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_levels); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_100getFactorMatrix(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_102setFieldSplitType(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_ctype); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_104setFieldSplitIS(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_fields); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_106setFieldSplitFields(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_bsize, PyObject *__pyx_v_fields); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_108getFieldSplitSubKSP(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_110setFieldSplitSchurFactType(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_ctype); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_112setFieldSplitSchurPreType(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_ptype, struct PyPetscMatObject *__pyx_v_pre); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_114setReusePreconditioner(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_116setCompositeType(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_ctype); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_118getCompositePC(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_n); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_120addCompositePC(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_pc_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_122getKSP(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_124getMGType(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_126setMGType(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_mgtype); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_128getMGLevels(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_130getMGCoarseSolve(struct PyPetscPCObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_132setMGInterpolation(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_134getMGInterpolation(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_136setMGRestriction(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_138getMGRestriction(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_140setMGRScale(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level, struct PyPetscVecObject *__pyx_v_rscale); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_142getMGRScale(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_144getMGSmoother(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_146getMGSmootherDown(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_148getMGSmootherUp(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_150setMGCyclesOnLevel(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level, PyObject *__pyx_v_ncycle); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_152setMGRhs(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level, struct PyPetscVecObject *__pyx_v_rhs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_154setMGX(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2PC_156setMGR(struct PyPetscPCObject *__pyx_v_self, PyObject *__pyx_v_level, struct PyPetscVecObject *__pyx_v_r); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP___cinit__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_2__call__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_b, PyObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_4view(struct PyPetscKSPObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_6destroy(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_8create(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_10setType(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_ksp_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_12getType(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_14setOptionsPrefix(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_prefix); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_16getOptionsPrefix(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_18setFromOptions(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_20setAppCtx(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_appctx); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_22getAppCtx(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_24getDM(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_26setDM(struct PyPetscKSPObject *__pyx_v_self, struct PyPetscDMObject *__pyx_v_dm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_28setDMActive(struct PyPetscKSPObject *__pyx_v_self, int __pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_30setComputeRHS(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_rhs, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_32setComputeOperators(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_operators, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_34setOperators(struct PyPetscKSPObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_A, struct PyPetscMatObject *__pyx_v_P); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_36getOperators(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_38setPC(struct PyPetscKSPObject *__pyx_v_self, struct PyPetscPCObject *__pyx_v_pc); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_40getPC(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_42setTolerances(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_rtol, PyObject *__pyx_v_atol, PyObject *__pyx_v_divtol, PyObject *__pyx_v_max_it); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_44getTolerances(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_46setConvergenceTest(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_converged, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_48getConvergenceTest(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_50callConvergenceTest(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_its, PyObject *__pyx_v_rnorm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_52setConvergenceHistory(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_length, PyObject *__pyx_v_reset); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_54getConvergenceHistory(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_56logConvergenceHistory(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_rnorm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_58setMonitor(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_monitor, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_60getMonitor(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_62cancelMonitor(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_64monitor(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_its, PyObject *__pyx_v_rnorm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_66setPCSide(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_side); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_68getPCSide(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_70setNormType(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_normtype); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_72getNormType(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_74setComputeEigenvalues(struct PyPetscKSPObject *__pyx_v_self, int __pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_76getComputeEigenvalues(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_78setComputeSingularValues(struct PyPetscKSPObject *__pyx_v_self, int __pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_80getComputeSingularValues(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_82setInitialGuessNonzero(struct PyPetscKSPObject *__pyx_v_self, int __pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_84getInitialGuessNonzero(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_86setInitialGuessKnoll(struct PyPetscKSPObject *__pyx_v_self, int __pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_88getInitialGuessKnoll(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_90setUseFischerGuess(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_model, PyObject *__pyx_v_size); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_92setUp(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_94reset(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_96setUpOnBlocks(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_98solve(struct PyPetscKSPObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_b, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_100solveTranspose(struct PyPetscKSPObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_b, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_102setIterationNumber(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_its); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_104getIterationNumber(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_106setResidualNorm(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_rnorm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_108getResidualNorm(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_110setConvergedReason(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_reason); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_112getConvergedReason(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_114getRhs(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_116getSolution(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_118getWorkVecs(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_right, PyObject *__pyx_v_left); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_120buildSolution(struct PyPetscKSPObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_122buildResidual(struct PyPetscKSPObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_r); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_124computeEigenvalues(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_126computeExtremeSingularValues(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_128setGMRESRestart(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_restart); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_130createPython(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_context, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_132setPythonContext(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_context); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_134getPythonContext(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_136setPythonType(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_py_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_6appctx___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_6appctx_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_2dm___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_2dm_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_7vec_sol___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_7vec_rhs___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_6mat_op___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_6mat_pc___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_13guess_nonzero___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_13guess_nonzero_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_11guess_knoll___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_11guess_knoll_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_2pc___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_7pc_side___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_7pc_side_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_9norm_type___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_9norm_type_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_4rtol___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_4rtol_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_4atol___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_4atol_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_6divtol___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_6divtol_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_6max_it___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_6max_it_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_3its___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_3its_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_4norm___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_4norm_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_7history___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_6reason___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3KSP_6reason_2__set__(struct PyPetscKSPObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_9iterating___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_9converged___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3KSP_8diverged___get__(struct PyPetscKSPObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES___cinit__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_2view(struct PyPetscSNESObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_4destroy(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_6create(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_8setType(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_snes_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_10getType(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_12setOptionsPrefix(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_prefix); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_14getOptionsPrefix(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_16setFromOptions(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_18setAppCtx(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_appctx); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_20getAppCtx(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_22getDM(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_24setDM(struct PyPetscSNESObject *__pyx_v_self, struct PyPetscDMObject *__pyx_v_dm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_26setFASInterpolation(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_level, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_28getFASInterpolation(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_30setFASRestriction(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_level, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_32getFASRestriction(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_34setFASInjection(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_level, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_36getFASInjection(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_38setFASRScale(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_level, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_40setFASLevels(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_levels, PyObject *__pyx_v_comms); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_42getFASLevels(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_44getFASCycleSNES(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_46getFASCoarseSolve(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_48getFASSmoother(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_50getFASSmootherDown(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_52getFASSmootherUp(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_level); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_54getNPC(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_56hasNPC(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_58setNPC(struct PyPetscSNESObject *__pyx_v_self, struct PyPetscSNESObject *__pyx_v_snes); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_60setInitialGuess(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_initialguess, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_62getInitialGuess(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_64setFunction(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_function, struct PyPetscVecObject *__pyx_v_f, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_66getFunction(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_68setUpdate(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_update, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_70getUpdate(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_72setJacobian(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_jacobian, struct PyPetscMatObject *__pyx_v_J, struct PyPetscMatObject *__pyx_v_P, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_74getJacobian(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_76setObjective(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_objective, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_78getObjective(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_80computeFunction(struct PyPetscSNESObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_f); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_82computeJacobian(struct PyPetscSNESObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscMatObject *__pyx_v_J, struct PyPetscMatObject *__pyx_v_P); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_84computeObjective(struct PyPetscSNESObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_86setTolerances(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_rtol, PyObject *__pyx_v_atol, PyObject *__pyx_v_stol, PyObject *__pyx_v_max_it); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_88getTolerances(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_90setNormSchedule(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_normsched); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_92getNormSchedule(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_94setConvergenceTest(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_converged, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_96getConvergenceTest(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_98callConvergenceTest(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_its, PyObject *__pyx_v_xnorm, PyObject *__pyx_v_ynorm, PyObject *__pyx_v_fnorm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_100setConvergenceHistory(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_length, PyObject *__pyx_v_reset); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_102getConvergenceHistory(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_104logConvergenceHistory(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_norm, PyObject *__pyx_v_linear_its); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_106setResetCounters(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_reset); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_108setMonitor(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_monitor, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_110getMonitor(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_112cancelMonitor(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_114monitor(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_its, PyObject *__pyx_v_rnorm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_116setMaxFunctionEvaluations(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_max_funcs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_118getMaxFunctionEvaluations(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_120getFunctionEvaluations(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_122setMaxStepFailures(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_max_fails); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_124getMaxStepFailures(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_126getStepFailures(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_128setMaxKSPFailures(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_max_fails); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_130getMaxKSPFailures(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_132getKSPFailures(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_134setUp(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_136reset(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_138solve(struct PyPetscSNESObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_b, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_140setConvergedReason(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_reason); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_142getConvergedReason(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_144setIterationNumber(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_its); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_146getIterationNumber(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_148getLinearSolveIterations(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_150getRhs(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_152getSolution(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_154setSolution(struct PyPetscSNESObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_156getSolutionUpdate(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_158setKSP(struct PyPetscSNESObject *__pyx_v_self, struct PyPetscKSPObject *__pyx_v_ksp); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_160getKSP(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_162setUseEW(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_flag, PyObject *__pyx_v_targs, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_164getUseEW(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_166setParamsEW(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_version, PyObject *__pyx_v_rtol_0, PyObject *__pyx_v_rtol_max, PyObject *__pyx_v_gamma, PyObject *__pyx_v_alpha, PyObject *__pyx_v_alpha2, PyObject *__pyx_v_threshold); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_168getParamsEW(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_170setUseMF(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_172getUseMF(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_174setUseFD(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_176getUseFD(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_178setVariableBounds(struct PyPetscSNESObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_xl, struct PyPetscVecObject *__pyx_v_xu); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_180getVIInactiveSet(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_182createPython(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_context, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_184setPythonContext(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_context); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_186getPythonContext(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_188setPythonType(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_py_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_190getCompositeSNES(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_n); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_192getCompositeNumber(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_6appctx___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_6appctx_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_2dm___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_2dm_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_3npc___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_3npc_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_7vec_sol___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_7vec_upd___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_7vec_rhs___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_3ksp___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_3ksp_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_6use_ew___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_6use_ew_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_4rtol___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_4rtol_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_4atol___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_4atol_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_4stol___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_4stol_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_6max_it___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_6max_it_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_9max_funcs___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_9max_funcs_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_3its___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_3its_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_7history___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_6reason___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_6reason_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_9iterating___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_9converged___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_8diverged___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_6use_mf___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_6use_mf_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4SNES_6use_fd___get__(struct PyPetscSNESObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_4SNES_6use_fd_2__set__(struct PyPetscSNESObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS___cinit__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_2view(struct PyPetscTSObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_4load(struct PyPetscTSObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_6destroy(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_8create(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_10clone(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_12setType(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_ts_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_14getType(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_16setProblemType(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_ptype); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_18getProblemType(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_20setEquationType(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_eqtype); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_22getEquationType(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_24setOptionsPrefix(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_prefix); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_26getOptionsPrefix(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_28setFromOptions(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_30setAppCtx(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_appctx); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_32getAppCtx(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_34setRHSFunction(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_function, struct PyPetscVecObject *__pyx_v_f, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_36setRHSJacobian(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_jacobian, struct PyPetscMatObject *__pyx_v_J, struct PyPetscMatObject *__pyx_v_P, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_38computeRHSFunction(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_t, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_f); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_40computeRHSFunctionLinear(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_t, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_f); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_42computeRHSJacobian(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_t, struct PyPetscVecObject *__pyx_v_x, struct PyPetscMatObject *__pyx_v_J, struct PyPetscMatObject *__pyx_v_P); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_44computeRHSJacobianConstant(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_t, struct PyPetscVecObject *__pyx_v_x, struct PyPetscMatObject *__pyx_v_J, struct PyPetscMatObject *__pyx_v_P); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_46getRHSFunction(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_48getRHSJacobian(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_50setIFunction(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_function, struct PyPetscVecObject *__pyx_v_f, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_52setIJacobian(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_jacobian, struct PyPetscMatObject *__pyx_v_J, struct PyPetscMatObject *__pyx_v_P, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_54computeIFunction(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_t, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_xdot, struct PyPetscVecObject *__pyx_v_f, PyObject *__pyx_v_imex); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_56computeIJacobian(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_t, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_xdot, PyObject *__pyx_v_a, struct PyPetscMatObject *__pyx_v_J, struct PyPetscMatObject *__pyx_v_P, PyObject *__pyx_v_imex); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_58getIFunction(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_60getIJacobian(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_62setSolution(struct PyPetscTSObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_u); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_64getSolution(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_66getSNES(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_68getKSP(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_70getDM(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_72setDM(struct PyPetscTSObject *__pyx_v_self, struct PyPetscDMObject *__pyx_v_dm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_74setTime(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_t); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_76getTime(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_78getPrevTime(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_80getSolveTime(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_82setInitialTimeStep(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_initial_time, PyObject *__pyx_v_initial_time_step); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_84setTimeStep(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_time_step); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_86getTimeStep(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_88setStepNumber(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_step_number); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_90getStepNumber(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_92setMaxTime(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_max_time); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_94getMaxTime(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_96setMaxSteps(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_max_steps); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_98getMaxSteps(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_100setDuration(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_max_time, PyObject *__pyx_v_max_steps); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_102getDuration(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_104getTotalSteps(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_106getSNESIterations(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_108getKSPIterations(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_110setMaxStepRejections(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_n); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_112getStepRejections(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_114setMaxSNESFailures(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_n); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_116getSNESFailures(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_118setErrorIfStepFails(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_120setTolerances(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_rtol, PyObject *__pyx_v_atol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_122getTolerances(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_124setExactFinalTime(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_option); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_126setConvergedReason(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_reason); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_128getConvergedReason(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_130setMonitor(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_monitor, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_132getMonitor(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_134cancelMonitor(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_136monitor(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_step, PyObject *__pyx_v_time, struct PyPetscVecObject *__pyx_v_u); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_138setPreStep(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_prestep, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_140getPreStep(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_142setPostStep(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_poststep, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_144getPostStep(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_146setUp(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_148reset(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_150step(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_152rollBack(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_154solve(struct PyPetscTSObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_u); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_156interpolate(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_t, struct PyPetscVecObject *__pyx_v_u); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_158createPython(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_context, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_160setPythonContext(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_context); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_162getPythonContext(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_164setPythonType(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_py_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_166setTheta(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_theta); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_168getTheta(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_170setThetaEndpoint(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_172getThetaEndpoint(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_174setAlphaRadius(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_radius); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_176setAlphaParams(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_alpha_m, PyObject *__pyx_v_alpha_f, PyObject *__pyx_v_gamma); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_178getAlphaParams(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_6appctx___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS_6appctx_2__set__(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_2dm___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS_2dm_2__set__(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_12problem_type___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS_12problem_type_2__set__(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_13equation_type___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS_13equation_type_2__set__(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_4snes___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_3ksp___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_7vec_sol___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_4time___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS_4time_2__set__(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_9time_step___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS_9time_step_2__set__(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_11step_number___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS_11step_number_2__set__(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_8max_time___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS_8max_time_2__set__(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_9max_steps___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS_9max_steps_2__set__(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_4rtol___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS_4rtol_2__set__(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_4atol___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS_4atol_2__set__(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_6reason___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2TS_6reason_2__set__(struct PyPetscTSObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_9iterating___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_9converged___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2TS_8diverged___get__(struct PyPetscTSObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3TAO___cinit__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_2view(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_4destroy(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_6create(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_8setType(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_tao_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_10getType(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_12setOptionsPrefix(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_prefix); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_14getOptionsPrefix(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_16setFromOptions(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_18setUp(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_20setInitialTrustRegionRadius(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_radius); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_22setAppCtx(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_appctx); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_24getAppCtx(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_26setInitial(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_28setObjective(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_objective, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_30setSeparableObjective(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_separable, struct PyPetscVecObject *__pyx_v_O, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_32setGradient(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_gradient, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_34setObjectiveGradient(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_objgrad, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_36setVariableBounds(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_varbounds, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_38setConstraints(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_constraints, struct PyPetscVecObject *__pyx_v_C, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_40setHessian(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_hessian, struct PyPetscMatObject *__pyx_v_H, struct PyPetscMatObject *__pyx_v_P, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_42setJacobian(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_jacobian, struct PyPetscMatObject *__pyx_v_J, struct PyPetscMatObject *__pyx_v_P, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_44setStateDesignIS(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscISObject *__pyx_v_state, struct PyPetscISObject *__pyx_v_design); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_46setJacobianState(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_jacobian_state, struct PyPetscMatObject *__pyx_v_J, struct PyPetscMatObject *__pyx_v_P, struct PyPetscMatObject *__pyx_v_I, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_48setJacobianDesign(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_jacobian_design, struct PyPetscMatObject *__pyx_v_J, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_50computeObjective(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_52computeSeparableObjective(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_f); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_54computeGradient(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_g); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_56computeObjectiveGradient(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_g); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_58computeDualVariables(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_xl, struct PyPetscVecObject *__pyx_v_xu); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_60computeVariableBounds(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_xl, struct PyPetscVecObject *__pyx_v_xu); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_62computeConstraints(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscVecObject *__pyx_v_c); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_64computeHessian(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscMatObject *__pyx_v_H, struct PyPetscMatObject *__pyx_v_P); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_66computeJacobian(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x, struct PyPetscMatObject *__pyx_v_J, struct PyPetscMatObject *__pyx_v_P); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_68setTolerances(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_gatol, PyObject *__pyx_v_grtol, PyObject *__pyx_v_gttol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_70getTolerances(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_72setConstraintTolerances(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_catol, PyObject *__pyx_v_crtol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_74getConstraintTolerances(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_76setConvergenceTest(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_converged, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_78getConvergenceTest(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_80setConvergedReason(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_reason); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_82getConvergedReason(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_84setMonitor(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_monitor, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_86getMonitor(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_88cancelMonitor(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_90solve(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_x); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_92getSolution(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_94getGradient(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_96setGradientNorm(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_98getGradientNorm(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_100setLMVMH0(struct PyPetscTAOObject *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_102getLMVMH0(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_104getLMVMH0KSP(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_106getVariableBounds(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_108getIterationNumber(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_110getObjectiveValue(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_112getConvergedReason(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_114getSolutionNorm(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_116getSolutionStatus(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_118getKSP(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_6appctx___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3TAO_6appctx_2__set__(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_3ksp___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_4ftol___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3TAO_4ftol_2__set__(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_4gtol___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3TAO_4gtol_2__set__(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_4ctol___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_3TAO_4ctol_2__set__(struct PyPetscTAOObject *__pyx_v_self, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_3its___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_5gnorm___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_5cnorm___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_8solution___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_9objective___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_8function___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_8gradient___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_6reason___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_9iterating___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_9converged___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_3TAO_8diverged___get__(struct PyPetscTAOObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2AO___cinit__(struct PyPetscAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2AO_2view(struct PyPetscAOObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2AO_4destroy(struct PyPetscAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2AO_6createBasic(struct PyPetscAOObject *__pyx_v_self, PyObject *__pyx_v_app, PyObject *__pyx_v_petsc, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2AO_8createMemoryScalable(struct PyPetscAOObject *__pyx_v_self, PyObject *__pyx_v_app, PyObject *__pyx_v_petsc, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2AO_10createMapping(struct PyPetscAOObject *__pyx_v_self, PyObject *__pyx_v_app, PyObject *__pyx_v_petsc, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2AO_12getType(struct PyPetscAOObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2AO_14app2petsc(struct PyPetscAOObject *__pyx_v_self, PyObject *__pyx_v_indices); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2AO_16petsc2app(struct PyPetscAOObject *__pyx_v_self, PyObject *__pyx_v_indices); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2DM___cinit__(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_2view(struct PyPetscDMObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_4destroy(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_6create(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_8clone(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_10setType(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_dm_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_12getType(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_14getDimension(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_16setDimension(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_dim); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_18setOptionsPrefix(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_prefix); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_20setFromOptions(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_22setUp(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_24setAppCtx(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_appctx); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_26getAppCtx(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_28getBlockSize(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_30setVecType(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_vec_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_32createGlobalVec(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_34createLocalVec(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_36globalToLocal(struct PyPetscDMObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vg, struct PyPetscVecObject *__pyx_v_vl, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_38localToGlobal(struct PyPetscDMObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vl, struct PyPetscVecObject *__pyx_v_vg, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_40localToLocal(struct PyPetscDMObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vl, struct PyPetscVecObject *__pyx_v_vlg, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_42getLGMap(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_44getCoordinateDM(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_46getCoordinateSection(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_48setCoordinates(struct PyPetscDMObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_c); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_50getCoordinates(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_52setCoordinatesLocal(struct PyPetscDMObject *__pyx_v_self, struct PyPetscVecObject *__pyx_v_c); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_54getCoordinatesLocal(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_56setMatType(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_mat_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_58createMat(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_60createInterpolation(struct PyPetscDMObject *__pyx_v_self, struct PyPetscDMObject *__pyx_v_dm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_62createInjection(struct PyPetscDMObject *__pyx_v_self, struct PyPetscDMObject *__pyx_v_dm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_64createAggregates(struct PyPetscDMObject *__pyx_v_self, struct PyPetscDMObject *__pyx_v_dm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_66convert(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_dm_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_68refine(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_70coarsen(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_72refineHierarchy(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_nlevels); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_74coarsenHierarchy(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_nlevels); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_76setDefaultSection(struct PyPetscDMObject *__pyx_v_self, struct PyPetscSectionObject *__pyx_v_sec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_78getDefaultSection(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_80setDefaultGlobalSection(struct PyPetscDMObject *__pyx_v_self, struct PyPetscSectionObject *__pyx_v_sec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_82getDefaultGlobalSection(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_84createDefaultSF(struct PyPetscDMObject *__pyx_v_self, struct PyPetscSectionObject *__pyx_v_localsec, struct PyPetscSectionObject *__pyx_v_globalsec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_86getDefaultSF(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_88getPointSF(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_90setPointSF(struct PyPetscDMObject *__pyx_v_self, struct PyPetscSFObject *__pyx_v_sf); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_92getNumLabels(struct PyPetscDMObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_94getLabelName(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_index); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_96hasLabel(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_98createLabel(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_100removeLabel(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_102getLabelValue(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_point); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_104setLabelValue(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_point, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_106clearLabelValue(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_point, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_108getLabelSize(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_110getLabelIdIS(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_112getStratumSize(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_114getStratumIS(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_116clearLabelStratum(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_118setLabelOutput(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name, PyObject *__pyx_v_output); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2DM_120getLabelOutput(struct PyPetscDMObject *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_create(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_dim, PyObject *__pyx_v_dof, PyObject *__pyx_v_sizes, PyObject *__pyx_v_proc_sizes, PyObject *__pyx_v_boundary_type, PyObject *__pyx_v_stencil_type, PyObject *__pyx_v_stencil_width, int __pyx_v_setup, PyObject *__pyx_v_ownership_ranges, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_2duplicate(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_dof, PyObject *__pyx_v_boundary_type, PyObject *__pyx_v_stencil_type, PyObject *__pyx_v_stencil_width); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_4setDim(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_dim); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_6getDim(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_8setDof(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_dof); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_10getDof(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_12setSizes(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_sizes); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_14getSizes(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_16setProcSizes(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_proc_sizes); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_18getProcSizes(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_20setBoundaryType(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_boundary_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_22getBoundaryType(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_24setStencilType(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_stencil_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_26getStencilType(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_28setStencilWidth(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_stencil_width); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_30getStencilWidth(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_32setStencil(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_stencil_type, PyObject *__pyx_v_stencil_width); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_34getStencil(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_36getRanges(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_38getGhostRanges(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_40getOwnershipRanges(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_42getCorners(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_44getGhostCorners(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_46setFieldName(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_field, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_48getFieldName(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_field); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_50getVecArray(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_52setUniformCoordinates(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_xmin, PyObject *__pyx_v_xmax, PyObject *__pyx_v_ymin, PyObject *__pyx_v_ymax, PyObject *__pyx_v_zmin, PyObject *__pyx_v_zmax); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_54setCoordinateName(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_index, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_56getCoordinateName(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_index); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_58getBoundingBox(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_60getLocalBoundingBox(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_62createNaturalVec(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_64globalToNatural(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vg, struct PyPetscVecObject *__pyx_v_vn, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_66naturalToGlobal(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, struct PyPetscVecObject *__pyx_v_vn, struct PyPetscVecObject *__pyx_v_vg, PyObject *__pyx_v_addv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_68getAO(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_70getScatter(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_72setRefinementFactor(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_refine_x, PyObject *__pyx_v_refine_y, PyObject *__pyx_v_refine_z); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_74getRefinementFactor(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_76setInterpolationType(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_interp_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_78getInterpolationType(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_80setElementType(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_elem_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_82getElementType(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_84getElements(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self, PyObject *__pyx_v_elem_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_3dim___get__(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_3dof___get__(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_5sizes___get__(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_10proc_sizes___get__(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_13boundary_type___get__(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_7stencil___get__(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_12stencil_type___get__(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_13stencil_width___get__(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_6ranges___get__(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_12ghost_ranges___get__(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_7corners___get__(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_4DMDA_13ghost_corners___get__(struct __pyx_obj_8petsc4py_5PETSc_DMDA *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_create(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_2createFromCellList(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_dim, PyObject *__pyx_v_cells, PyObject *__pyx_v_coords, PyObject *__pyx_v_interpolate, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_4createBoxMesh(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_dim, PyObject *__pyx_v_interpolate, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_6createHexBoxMesh(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_numcells, PyObject *__pyx_v_boundary_type, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_8createCGNS(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_cgid, PyObject *__pyx_v_interpolate, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_10createCGNSFromFile(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_filename, PyObject *__pyx_v_interpolate, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_12createExodusFromFile(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_filename, PyObject *__pyx_v_interpolate, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_14createExodus(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_exoid, PyObject *__pyx_v_interpolate, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_16createGmsh(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer, PyObject *__pyx_v_interpolate, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_18createCohesiveSubmesh(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_hasLagrange, PyObject *__pyx_v_value); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_20getChart(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_22setChart(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_pStart, PyObject *__pyx_v_pEnd); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_24getConeSize(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_26setConeSize(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p, PyObject *__pyx_v_size); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_28getCone(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_30setCone(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p, PyObject *__pyx_v_cone, PyObject *__pyx_v_orientation); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_32insertCone(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p, PyObject *__pyx_v_conePos, PyObject *__pyx_v_conePoint); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_34insertConeOrientation(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p, PyObject *__pyx_v_conePos, PyObject *__pyx_v_coneOrientation); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_36getConeOrientation(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_38setConeOrientation(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p, PyObject *__pyx_v_orientation); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_40getSupportSize(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_42setSupportSize(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p, PyObject *__pyx_v_size); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_44getSupport(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_46setSupport(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p, PyObject *__pyx_v_supp); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_48getMaxSizes(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_50symmetrize(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_52stratify(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_54orient(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_56getCellNumbering(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_58getVertexNumbering(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_60createPointNumbering(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_62getDepth(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_64getDepthStratum(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_svalue); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_66getHeightStratum(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_svalue); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_68getMeet(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_points); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_70getJoin(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_points); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_72getTransitiveClosure(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_p, PyObject *__pyx_v_useCone); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_74vecGetClosure(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, struct PyPetscSectionObject *__pyx_v_sec, struct PyPetscVecObject *__pyx_v_vec, PyObject *__pyx_v_p); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_76generate(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_boundary, PyObject *__pyx_v_name, PyObject *__pyx_v_interpolate); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_78setTriangleOptions(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_opts); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_80setTetGenOptions(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_opts); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_82createSquareBoundary(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_lower, PyObject *__pyx_v_upper, PyObject *__pyx_v_edges); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_84createCubeBoundary(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_lower, PyObject *__pyx_v_upper, PyObject *__pyx_v_faces); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_86markBoundaryFaces(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_label); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_88setAdjacencyUseCone(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_useCone); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_90setAdjacencyUseClosure(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_useClosure); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_92getPartitioner(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_94distribute(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_overlap); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_96distributeOverlap(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_overlap); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_98distributeField(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, struct PyPetscSFObject *__pyx_v_sf, struct PyPetscSectionObject *__pyx_v_sec, struct PyPetscVecObject *__pyx_v_vec, struct PyPetscSectionObject *__pyx_v_newsec, struct PyPetscVecObject *__pyx_v_newvec); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_100createCoarsePointIS(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_102createSection(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_numComp, PyObject *__pyx_v_numDof, PyObject *__pyx_v_bcField, PyObject *__pyx_v_bcComps, PyObject *__pyx_v_bcPoints, struct PyPetscISObject *__pyx_v_perm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_104setRefinementUniform(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_refinementUniform); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_106getRefinementUniform(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_108setRefinementLimit(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_refinementLimit); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_110getRefinementLimit(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_112getOrdering(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_otype); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_114permute(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, struct PyPetscISObject *__pyx_v_perm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_6DMPlex_116computeCellGeometryFVM(struct __pyx_obj_8petsc4py_5PETSc_DMPlex *__pyx_v_self, PyObject *__pyx_v_cell); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11DMComposite_create(struct __pyx_obj_8petsc4py_5PETSc_DMComposite *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11DMComposite_2addDM(struct __pyx_obj_8petsc4py_5PETSc_DMComposite *__pyx_v_self, struct PyPetscDMObject *__pyx_v_dm, PyObject *__pyx_v_args); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11DMComposite_4getNumber(struct __pyx_obj_8petsc4py_5PETSc_DMComposite *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11DMComposite_6getEntries(struct __pyx_obj_8petsc4py_5PETSc_DMComposite *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11DMComposite_8scatter(struct __pyx_obj_8petsc4py_5PETSc_DMComposite *__pyx_v_self, struct PyPetscVecObject *__pyx_v_gvec, PyObject *__pyx_v_lvecs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11DMComposite_10gather(struct __pyx_obj_8petsc4py_5PETSc_DMComposite *__pyx_v_self, struct PyPetscVecObject *__pyx_v_gvec, PyObject *__pyx_v_imode, PyObject *__pyx_v_lvecs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11DMComposite_12getGlobalISs(struct __pyx_obj_8petsc4py_5PETSc_DMComposite *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11DMComposite_14getLocalISs(struct __pyx_obj_8petsc4py_5PETSc_DMComposite *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11DMComposite_16getLGMaps(struct __pyx_obj_8petsc4py_5PETSc_DMComposite *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11DMComposite_18getAccess(struct __pyx_obj_8petsc4py_5PETSc_DMComposite *__pyx_v_self, struct PyPetscVecObject *__pyx_v_gvec, PyObject *__pyx_v_locs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_create(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_2setMatrix(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, struct PyPetscMatObject *__pyx_v_mat); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_4setGlobalVector(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, struct PyPetscVecObject *__pyx_v_gv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_6setLocalVector(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, struct PyPetscVecObject *__pyx_v_lv); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_8setCreateGlobalVector(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_create_gvec, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_10setCreateLocalVector(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_create_lvec, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_12setGlobalToLocal(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_begin, PyObject *__pyx_v_end, PyObject *__pyx_v_begin_args, PyObject *__pyx_v_begin_kargs, PyObject *__pyx_v_end_args, PyObject *__pyx_v_end_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_14setGlobalToLocalVecScatter(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, struct PyPetscScatterObject *__pyx_v_gtol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_16setLocalToGlobal(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_begin, PyObject *__pyx_v_end, PyObject *__pyx_v_begin_args, PyObject *__pyx_v_begin_kargs, PyObject *__pyx_v_end_args, PyObject *__pyx_v_end_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_18setLocalToGlobalVecScatter(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, struct PyPetscScatterObject *__pyx_v_ltog); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_20setLocalToLocal(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_begin, PyObject *__pyx_v_end, PyObject *__pyx_v_begin_args, PyObject *__pyx_v_begin_kargs, PyObject *__pyx_v_end_args, PyObject *__pyx_v_end_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_22setLocalToLocalVecScatter(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, struct PyPetscScatterObject *__pyx_v_ltol); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_24setCreateMatrix(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_create_matrix, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_26setCoarsen(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_coarsen, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_28setRefine(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_refine, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_30setCreateInterpolation(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_create_interpolation, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_32setCreateInjection(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_create_injection, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_34setCreateFieldDecomposition(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_decomp, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_7DMShell_36setCreateSubDM(struct __pyx_obj_8petsc4py_5PETSc_DMShell *__pyx_v_self, PyObject *__pyx_v_create_subdm, PyObject *__pyx_v_args, PyObject *__pyx_v_kargs); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_2SF___cinit__(struct PyPetscSFObject *__pyx_v_self); /* proto */ static void __pyx_pf_8petsc4py_5PETSc_2SF_2__dealloc__(struct PyPetscSFObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_4view(struct PyPetscSFObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_6destroy(struct PyPetscSFObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_8create(struct PyPetscSFObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_10setType(struct PyPetscSFObject *__pyx_v_self, PyObject *__pyx_v_sf_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_12getType(struct PyPetscSFObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_14setFromOptions(struct PyPetscSFObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_16setUp(struct PyPetscSFObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_18reset(struct PyPetscSFObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_20getGraph(struct PyPetscSFObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_22setGraph(struct PyPetscSFObject *__pyx_v_self, PyObject *__pyx_v_nroots, PyObject *__pyx_v_nleaves, PyObject *__pyx_v_local, PyObject *__pyx_v_remote); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_24setRankOrder(struct PyPetscSFObject *__pyx_v_self, PyObject *__pyx_v_flag); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_26getMulti(struct PyPetscSFObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2SF_28createInverse(struct PyPetscSFObject *__pyx_v_self); /* proto */ static int __pyx_pf_8petsc4py_5PETSc_11Partitioner___cinit__(struct PyPetscPartitionerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11Partitioner_2view(struct PyPetscPartitionerObject *__pyx_v_self, struct PyPetscViewerObject *__pyx_v_viewer); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11Partitioner_4destroy(struct PyPetscPartitionerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11Partitioner_6create(struct PyPetscPartitionerObject *__pyx_v_self, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11Partitioner_8setType(struct PyPetscPartitionerObject *__pyx_v_self, PyObject *__pyx_v_part_type); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11Partitioner_10getType(struct PyPetscPartitionerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11Partitioner_12setFromOptions(struct PyPetscPartitionerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11Partitioner_14setUp(struct PyPetscPartitionerObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_11Partitioner_16setShellPartition(struct PyPetscPartitionerObject *__pyx_v_self, PyObject *__pyx_v_numProcs, PyObject *__pyx_v_sizes, PyObject *__pyx_v_points); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc__initialize(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_args, PyObject *__pyx_v_comm); /* proto */ static PyObject *__pyx_pf_8petsc4py_5PETSc_2_finalize(CYTHON_UNUSED PyObject *__pyx_self); /* proto */ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Comm(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Object(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Viewer(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Random(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_IS(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_LGMap(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_SF(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Vec(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Scatter(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Section(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Mat(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_NullSpace(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_PC(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_KSP(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_SNES(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_TS(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_TAO(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_AO(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_DM(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Partitioner(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc__IS_buffer(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc__Vec_buffer(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_8petsc4py_5PETSc__Vec_LocalForm(PyTypeObject *t, PyObject *a, PyObject *k); 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IS __pyx_v_ispetsc; PetscInt __pyx_v_napp; PetscInt *__pyx_v_idxapp; PetscInt __pyx_v_npetsc; PetscInt *__pyx_v_idxpetsc; MPI_Comm __pyx_v_ccomm; AO __pyx_v_newao; PyObject *__pyx_r = NULL; __Pyx_RefNannyDeclarations MPI_Comm __pyx_t_1; int __pyx_t_2; int __pyx_t_3; IS __pyx_t_4; int __pyx_t_5; PyObject *__pyx_t_6 = NULL; __Pyx_RefNannySetupContext("createBasic", 0); __Pyx_INCREF(__pyx_v_app); __Pyx_INCREF(__pyx_v_petsc); /* "PETSc/AO.pyx":29 * * def createBasic(self, app, petsc=None, comm=None): * cdef PetscIS isapp = NULL, ispetsc = NULL # <<<<<<<<<<<<<< * cdef PetscInt napp = 0, *idxapp = NULL, * cdef PetscInt npetsc = 0, *idxpetsc = NULL */ __pyx_v_isapp = NULL; __pyx_v_ispetsc = NULL; /* "PETSc/AO.pyx":30 * def createBasic(self, app, petsc=None, comm=None): * cdef PetscIS isapp = NULL, ispetsc = NULL * cdef PetscInt napp = 0, *idxapp = NULL, # <<<<<<<<<<<<<< * cdef PetscInt npetsc = 0, *idxpetsc = NULL * cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) */ __pyx_v_napp = 0; 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(struct PyPetscCommObject *)o; tmp = ((PyObject*)p->base); p->base = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4Comm_size(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4Comm_4size_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4Comm_rank(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4Comm_4rank_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4Comm_fortran(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4Comm_7fortran_1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_Comm[] = { {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4Comm_9destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4Comm_8destroy}, {"duplicate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4Comm_11duplicate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4Comm_10duplicate}, {"getSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4Comm_13getSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4Comm_12getSize}, {"getRank", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4Comm_15getRank, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4Comm_14getRank}, {"barrier", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4Comm_17barrier, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4Comm_16barrier}, {"tompi4py", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4Comm_19tompi4py, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4Comm_18tompi4py}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_Comm[] = { {(char *)"size", __pyx_getprop_8petsc4py_5PETSc_4Comm_size, 0, (char *)0, 0}, {(char *)"rank", __pyx_getprop_8petsc4py_5PETSc_4Comm_rank, 0, (char *)0, 0}, {(char *)"fortran", __pyx_getprop_8petsc4py_5PETSc_4Comm_fortran, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyNumberMethods __pyx_tp_as_number_Comm = { 0, /*nb_add*/ 0, /*nb_subtract*/ 0, /*nb_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_divide*/ #endif 0, /*nb_remainder*/ 0, /*nb_divmod*/ 0, /*nb_power*/ 0, /*nb_negative*/ 0, /*nb_positive*/ 0, /*nb_absolute*/ __pyx_pw_8petsc4py_5PETSc_4Comm_7__nonzero__, /*nb_nonzero*/ 0, /*nb_invert*/ 0, /*nb_lshift*/ 0, /*nb_rshift*/ 0, /*nb_and*/ 0, /*nb_xor*/ 0, /*nb_or*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_coerce*/ #endif 0, /*nb_int*/ #if PY_MAJOR_VERSION < 3 0, /*nb_long*/ #else 0, /*reserved*/ #endif 0, /*nb_float*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_oct*/ #endif #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_hex*/ #endif 0, /*nb_inplace_add*/ 0, /*nb_inplace_subtract*/ 0, /*nb_inplace_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_inplace_divide*/ #endif 0, /*nb_inplace_remainder*/ 0, /*nb_inplace_power*/ 0, /*nb_inplace_lshift*/ 0, /*nb_inplace_rshift*/ 0, /*nb_inplace_and*/ 0, /*nb_inplace_xor*/ 0, /*nb_inplace_or*/ 0, /*nb_floor_divide*/ 0, /*nb_true_divide*/ 0, /*nb_inplace_floor_divide*/ 0, /*nb_inplace_true_divide*/ 0, /*nb_index*/ #if PY_VERSION_HEX >= 0x03050000 0, /*nb_matrix_multiply*/ #endif #if PY_VERSION_HEX >= 0x03050000 0, /*nb_inplace_matrix_multiply*/ #endif }; DL_EXPORT(PyTypeObject) PyPetscComm_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.Comm", /*tp_name*/ sizeof(struct PyPetscCommObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Comm, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ &__pyx_tp_as_number_Comm, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Comm, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Comm, /*tp_clear*/ __pyx_pw_8petsc4py_5PETSc_4Comm_5__richcmp__, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_Comm, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_Comm, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_Comm, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_vtable_8petsc4py_5PETSc_Object; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Object(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { struct PyPetscObjectObject *p; PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; p = ((struct PyPetscObjectObject *)o); p->__pyx_vtab = __pyx_vtabptr_8petsc4py_5PETSc_Object; p->__pyx___dummy__ = Py_None; Py_INCREF(Py_None); if (unlikely(__pyx_pw_8petsc4py_5PETSc_6Object_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc_Object(PyObject *o) { struct PyPetscObjectObject *p = (struct PyPetscObjectObject *)o; #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif PyObject_GC_UnTrack(o); { PyObject *etype, *eval, *etb; PyErr_Fetch(&etype, &eval, &etb); ++Py_REFCNT(o); __pyx_pw_8petsc4py_5PETSc_6Object_3__dealloc__(o); --Py_REFCNT(o); PyErr_Restore(etype, eval, etb); } if (p->__weakref__) PyObject_ClearWeakRefs(o); Py_CLEAR(p->__pyx___dummy__); (*Py_TYPE(o)->tp_free)(o); } static int __pyx_tp_traverse_8petsc4py_5PETSc_Object(PyObject *o, visitproc v, void *a) { int e; struct PyPetscObjectObject *p = (struct PyPetscObjectObject *)o; if (p->__pyx___dummy__) { e = (*v)(p->__pyx___dummy__, a); if (e) return e; } return 0; } static int __pyx_tp_clear_8petsc4py_5PETSc_Object(PyObject *o) { PyObject* tmp; struct PyPetscObjectObject *p = (struct PyPetscObjectObject *)o; tmp = ((PyObject*)p->__pyx___dummy__); p->__pyx___dummy__ = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyObject *__pyx_getprop_8petsc4py_5PETSc_6Object_type(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_6Object_4type_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_6Object_type(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_6Object_4type_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_6Object_prefix(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_6Object_6prefix_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_6Object_prefix(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_6Object_6prefix_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_6Object_comm(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_6Object_4comm_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_6Object_name(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_6Object_4name_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_6Object_name(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_6Object_4name_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_6Object_classid(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_6Object_7classid_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_6Object_klass(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_6Object_5klass_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_6Object_refcount(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_6Object_8refcount_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_6Object_handle(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_6Object_6handle_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_6Object_fortran(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_6Object_7fortran_1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_Object[] = { {"__copy__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_9__copy__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_8__copy__}, {"__deepcopy__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_11__deepcopy__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_10__deepcopy__}, {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_13view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_12view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_15destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_14destroy}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_17getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_16getType}, {"setOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_19setOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_18setOptionsPrefix}, {"getOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_21getOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_20getOptionsPrefix}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_23setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_22setFromOptions}, {"getComm", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_25getComm, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_24getComm}, {"getName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_27getName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_26getName}, {"setName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_29setName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_28setName}, {"getClassId", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_31getClassId, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_30getClassId}, {"getClassName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_33getClassName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_32getClassName}, {"getRefCount", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_35getRefCount, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_34getRefCount}, {"compose", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_37compose, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_36compose}, {"query", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_39query, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_38query}, {"incRef", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_41incRef, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_40incRef}, {"decRef", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_43decRef, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_42decRef}, {"getAttr", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_45getAttr, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_44getAttr}, {"setAttr", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_47setAttr, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_46setAttr}, {"getDict", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_49getDict, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_48getDict}, {"stateIncrease", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_51stateIncrease, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_50stateIncrease}, {"incrementTabLevel", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_53incrementTabLevel, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_52incrementTabLevel}, {"setTabLevel", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_55setTabLevel, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_54setTabLevel}, {"getTabLevel", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Object_57getTabLevel, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Object_56getTabLevel}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_Object[] = { {(char *)"type", __pyx_getprop_8petsc4py_5PETSc_6Object_type, __pyx_setprop_8petsc4py_5PETSc_6Object_type, (char *)0, 0}, {(char *)"prefix", __pyx_getprop_8petsc4py_5PETSc_6Object_prefix, __pyx_setprop_8petsc4py_5PETSc_6Object_prefix, (char *)0, 0}, {(char *)"comm", __pyx_getprop_8petsc4py_5PETSc_6Object_comm, 0, (char *)0, 0}, {(char *)"name", __pyx_getprop_8petsc4py_5PETSc_6Object_name, __pyx_setprop_8petsc4py_5PETSc_6Object_name, (char *)0, 0}, {(char *)"classid", __pyx_getprop_8petsc4py_5PETSc_6Object_classid, 0, (char *)0, 0}, {(char *)"klass", __pyx_getprop_8petsc4py_5PETSc_6Object_klass, 0, (char *)0, 0}, {(char *)"refcount", __pyx_getprop_8petsc4py_5PETSc_6Object_refcount, 0, (char *)0, 0}, {(char *)"handle", __pyx_getprop_8petsc4py_5PETSc_6Object_handle, 0, (char *)0, 0}, {(char *)"fortran", __pyx_getprop_8petsc4py_5PETSc_6Object_fortran, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyNumberMethods __pyx_tp_as_number_Object = { 0, /*nb_add*/ 0, /*nb_subtract*/ 0, /*nb_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_divide*/ #endif 0, /*nb_remainder*/ 0, /*nb_divmod*/ 0, /*nb_power*/ 0, /*nb_negative*/ 0, /*nb_positive*/ 0, /*nb_absolute*/ __pyx_pw_8petsc4py_5PETSc_6Object_7__nonzero__, /*nb_nonzero*/ 0, /*nb_invert*/ 0, /*nb_lshift*/ 0, /*nb_rshift*/ 0, /*nb_and*/ 0, /*nb_xor*/ 0, /*nb_or*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_coerce*/ #endif 0, /*nb_int*/ #if PY_MAJOR_VERSION < 3 0, /*nb_long*/ #else 0, /*reserved*/ #endif 0, /*nb_float*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_oct*/ #endif #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_hex*/ #endif 0, /*nb_inplace_add*/ 0, /*nb_inplace_subtract*/ 0, /*nb_inplace_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_inplace_divide*/ #endif 0, /*nb_inplace_remainder*/ 0, /*nb_inplace_power*/ 0, /*nb_inplace_lshift*/ 0, /*nb_inplace_rshift*/ 0, /*nb_inplace_and*/ 0, /*nb_inplace_xor*/ 0, /*nb_inplace_or*/ 0, /*nb_floor_divide*/ 0, /*nb_true_divide*/ 0, /*nb_inplace_floor_divide*/ 0, /*nb_inplace_true_divide*/ 0, /*nb_index*/ #if PY_VERSION_HEX >= 0x03050000 0, /*nb_matrix_multiply*/ #endif #if PY_VERSION_HEX >= 0x03050000 0, /*nb_inplace_matrix_multiply*/ #endif }; DL_EXPORT(PyTypeObject) PyPetscObject_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.Object", /*tp_name*/ sizeof(struct PyPetscObjectObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ &__pyx_tp_as_number_Object, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ __pyx_pw_8petsc4py_5PETSc_6Object_5__richcmp__, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_Object, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_Object, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_Object, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Viewer __pyx_vtable_8petsc4py_5PETSc_Viewer; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Viewer(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscViewerObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscViewerObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_Viewer; if (unlikely(__pyx_pw_8petsc4py_5PETSc_6Viewer_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_Viewer[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_5view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_4view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_7destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_6destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_9create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_8create}, {"createASCII", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_11createASCII, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_10createASCII}, {"createBinary", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_13createBinary, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_12createBinary}, {"createMPIIO", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_15createMPIIO, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_14createMPIIO}, {"createVTK", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_17createVTK, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_16createVTK}, {"createHDF5", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_19createHDF5, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_18createHDF5}, {"createNetCDF", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_21createNetCDF, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_20createNetCDF}, {"createDraw", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_23createDraw, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_22createDraw}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_25setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_24setType}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_27getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_26getType}, {"getFormat", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_29getFormat, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_28getFormat}, {"pushFormat", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_31pushFormat, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_30pushFormat}, {"popFormat", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_33popFormat, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_32popFormat}, {"STDOUT", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_35STDOUT, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_34STDOUT}, {"STDERR", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_37STDERR, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_36STDERR}, {"ASCII", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_39ASCII, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_38ASCII}, {"BINARY", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_41BINARY, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_40BINARY}, {"DRAW", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_43DRAW, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_42DRAW}, {"flush", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_45flush, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_44flush}, {"setFileMode", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_47setFileMode, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_46setFileMode}, {"getFileMode", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_49getFileMode, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_48getFileMode}, {"setFileName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_51setFileName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_50setFileName}, {"getFileName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_53getFileName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_52getFileName}, {"setDrawInfo", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_55setDrawInfo, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_54setDrawInfo}, {"clearDraw", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Viewer_57clearDraw, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Viewer_56clearDraw}, {0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscViewer_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.Viewer", /*tp_name*/ sizeof(struct PyPetscViewerObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ __pyx_pw_8petsc4py_5PETSc_6Viewer_3__call__, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_Viewer, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_Viewer, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Random __pyx_vtable_8petsc4py_5PETSc_Random; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Random(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscRandomObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscRandomObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_Random; if (unlikely(__pyx_pw_8petsc4py_5PETSc_6Random_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyObject *__pyx_getprop_8petsc4py_5PETSc_6Random_seed(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_6Random_4seed_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_6Random_seed(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_6Random_4seed_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_6Random_interval(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_6Random_8interval_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_6Random_interval(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_6Random_8interval_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_Random[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Random_5view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Random_4view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Random_7destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Random_6destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Random_9create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Random_8create}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Random_11setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Random_10setType}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Random_13getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Random_12getType}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Random_15setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Random_14setFromOptions}, {"getValue", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Random_17getValue, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Random_16getValue}, {"getValueReal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Random_19getValueReal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Random_18getValueReal}, {"getSeed", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Random_21getSeed, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Random_20getSeed}, {"setSeed", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Random_23setSeed, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Random_22setSeed}, {"getInterval", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Random_25getInterval, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Random_24getInterval}, {"setInterval", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6Random_27setInterval, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6Random_26setInterval}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_Random[] = { {(char *)"seed", __pyx_getprop_8petsc4py_5PETSc_6Random_seed, __pyx_setprop_8petsc4py_5PETSc_6Random_seed, (char *)0, 0}, {(char *)"interval", __pyx_getprop_8petsc4py_5PETSc_6Random_interval, __pyx_setprop_8petsc4py_5PETSc_6Random_interval, (char *)0, 0}, {0, 0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscRandom_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.Random", /*tp_name*/ sizeof(struct PyPetscRandomObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ __pyx_pw_8petsc4py_5PETSc_6Random_3__call__, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_Random, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_Random, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_Random, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_IS __pyx_vtable_8petsc4py_5PETSc_IS; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_IS(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscISObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscISObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_IS; if (unlikely(__pyx_pw_8petsc4py_5PETSc_2IS_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2IS_permutation(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2IS_11permutation_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2IS_identity(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2IS_8identity_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2IS_sorted(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2IS_6sorted_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2IS_sizes(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2IS_5sizes_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2IS_size(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2IS_4size_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2IS_local_size(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2IS_10local_size_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2IS_block_size(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2IS_10block_size_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2IS_indices(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2IS_7indices_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2IS_array(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2IS_5array_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2IS___array_interface__(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2IS_19__array_interface___1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_IS[] = { {"__enter__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_7__enter__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_6__enter__}, {"__exit__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_9__exit__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_8__exit__}, {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_11view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_10view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_13destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_12destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_15create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_14create}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_17setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_16setType}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_19getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_18getType}, {"createGeneral", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_21createGeneral, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_20createGeneral}, {"createBlock", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_23createBlock, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_22createBlock}, {"createStride", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_25createStride, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_24createStride}, {"duplicate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_27duplicate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_26duplicate}, {"copy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_29copy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_28copy}, {"load", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_31load, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_30load}, {"allGather", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_33allGather, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_32allGather}, {"toGeneral", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_35toGeneral, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_34toGeneral}, {"invertPermutation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_37invertPermutation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_36invertPermutation}, {"getSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_39getSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_38getSize}, {"getLocalSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_41getLocalSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_40getLocalSize}, {"getSizes", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_43getSizes, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_42getSizes}, {"getBlockSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_45getBlockSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_44getBlockSize}, {"setBlockSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_47setBlockSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_46setBlockSize}, {"sort", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_49sort, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_48sort}, {"isSorted", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_51isSorted, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_50isSorted}, {"setPermutation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_53setPermutation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_52setPermutation}, {"isPermutation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_55isPermutation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_54isPermutation}, {"setIdentity", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_57setIdentity, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_56setIdentity}, {"isIdentity", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_59isIdentity, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_58isIdentity}, {"equal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_61equal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_60equal}, {"sum", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_63sum, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_62sum}, {"expand", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_65expand, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_64expand}, {"union", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_67union, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_66union}, {"difference", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_69difference, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_68difference}, {"complement", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_71complement, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_70complement}, {"embed", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_73embed, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_72embed}, {"setIndices", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_75setIndices, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_74setIndices}, {"getIndices", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_77getIndices, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_76getIndices}, {"setBlockIndices", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_79setBlockIndices, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_78setBlockIndices}, {"getBlockIndices", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_81getBlockIndices, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_80getBlockIndices}, {"setStride", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_83setStride, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_82setStride}, {"getStride", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_85getStride, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_84getStride}, {"getInfo", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2IS_87getInfo, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2IS_86getInfo}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_IS[] = { {(char *)"permutation", __pyx_getprop_8petsc4py_5PETSc_2IS_permutation, 0, (char *)0, 0}, {(char *)"identity", __pyx_getprop_8petsc4py_5PETSc_2IS_identity, 0, (char *)0, 0}, {(char *)"sorted", __pyx_getprop_8petsc4py_5PETSc_2IS_sorted, 0, (char *)0, 0}, {(char *)"sizes", __pyx_getprop_8petsc4py_5PETSc_2IS_sizes, 0, (char *)0, 0}, {(char *)"size", __pyx_getprop_8petsc4py_5PETSc_2IS_size, 0, (char *)0, 0}, {(char *)"local_size", __pyx_getprop_8petsc4py_5PETSc_2IS_local_size, 0, (char *)0, 0}, {(char *)"block_size", __pyx_getprop_8petsc4py_5PETSc_2IS_block_size, 0, (char *)0, 0}, {(char *)"indices", __pyx_getprop_8petsc4py_5PETSc_2IS_indices, 0, (char *)0, 0}, {(char *)"array", __pyx_getprop_8petsc4py_5PETSc_2IS_array, 0, (char *)0, 0}, {(char *)"__array_interface__", __pyx_getprop_8petsc4py_5PETSc_2IS___array_interface__, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyBufferProcs __pyx_tp_as_buffer_IS = { #if PY_MAJOR_VERSION < 3 0, /*bf_getreadbuffer*/ #endif #if PY_MAJOR_VERSION < 3 0, /*bf_getwritebuffer*/ #endif #if PY_MAJOR_VERSION < 3 0, /*bf_getsegcount*/ #endif #if PY_MAJOR_VERSION < 3 0, /*bf_getcharbuffer*/ #endif __pyx_pw_8petsc4py_5PETSc_2IS_3__getbuffer__, /*bf_getbuffer*/ __pyx_pw_8petsc4py_5PETSc_2IS_5__releasebuffer__, /*bf_releasebuffer*/ }; DL_EXPORT(PyTypeObject) PyPetscIS_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.IS", /*tp_name*/ sizeof(struct PyPetscISObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ &__pyx_tp_as_buffer_IS, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_IS, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_IS, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_IS, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_LGMap __pyx_vtable_8petsc4py_5PETSc_LGMap; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_LGMap(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscLGMapObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscLGMapObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_LGMap; if (unlikely(__pyx_pw_8petsc4py_5PETSc_5LGMap_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyObject *__pyx_getprop_8petsc4py_5PETSc_5LGMap_size(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_5LGMap_4size_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_5LGMap_block_size(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_5LGMap_10block_size_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_5LGMap_indices(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_5LGMap_7indices_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_5LGMap_block_indices(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_5LGMap_13block_indices_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_5LGMap_info(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_5LGMap_4info_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_5LGMap_block_info(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_5LGMap_10block_info_1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_LGMap[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_5view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_4view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_7destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_6destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_9create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_8create}, {"createIS", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_11createIS, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_10createIS}, {"createSF", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_13createSF, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_12createSF}, {"getSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_15getSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_14getSize}, {"getBlockSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_17getBlockSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_16getBlockSize}, {"getIndices", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_19getIndices, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_18getIndices}, {"getBlockIndices", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_21getBlockIndices, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_20getBlockIndices}, {"getInfo", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_23getInfo, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_22getInfo}, {"getBlockInfo", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_25getBlockInfo, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_24getBlockInfo}, {"apply", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_27apply, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_26apply}, {"applyBlock", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_29applyBlock, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_28applyBlock}, {"applyIS", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_31applyIS, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_30applyIS}, {"applyInverse", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_33applyInverse, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_32applyInverse}, {"applyBlockInverse", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_5LGMap_35applyBlockInverse, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_5LGMap_34applyBlockInverse}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_LGMap[] = { {(char *)"size", __pyx_getprop_8petsc4py_5PETSc_5LGMap_size, 0, (char *)0, 0}, {(char *)"block_size", __pyx_getprop_8petsc4py_5PETSc_5LGMap_block_size, 0, (char *)0, 0}, {(char *)"indices", __pyx_getprop_8petsc4py_5PETSc_5LGMap_indices, 0, (char *)0, 0}, {(char *)"block_indices", __pyx_getprop_8petsc4py_5PETSc_5LGMap_block_indices, 0, (char *)0, 0}, {(char *)"info", __pyx_getprop_8petsc4py_5PETSc_5LGMap_info, 0, (char *)0, 0}, {(char *)"block_info", __pyx_getprop_8petsc4py_5PETSc_5LGMap_block_info, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscLGMap_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.LGMap", /*tp_name*/ sizeof(struct PyPetscLGMapObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ __pyx_pw_8petsc4py_5PETSc_5LGMap_3__call__, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_LGMap, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_LGMap, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_LGMap, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_SF __pyx_vtable_8petsc4py_5PETSc_SF; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_SF(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscSFObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscSFObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_SF; if (unlikely(__pyx_pw_8petsc4py_5PETSc_2SF_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc_SF(PyObject *o) { #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif PyObject_GC_UnTrack(o); { PyObject *etype, *eval, *etb; PyErr_Fetch(&etype, &eval, &etb); ++Py_REFCNT(o); __pyx_pw_8petsc4py_5PETSc_2SF_3__dealloc__(o); --Py_REFCNT(o); PyErr_Restore(etype, eval, etb); } PyObject_GC_Track(o); __pyx_tp_dealloc_8petsc4py_5PETSc_Object(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_SF[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_5view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_4view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_7destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_6destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_9create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_8create}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_11setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_10setType}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_13getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_12getType}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_15setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_14setFromOptions}, {"setUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_17setUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_16setUp}, {"reset", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_19reset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_18reset}, {"getGraph", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_21getGraph, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_20getGraph}, {"setGraph", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_23setGraph, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_22setGraph}, {"setRankOrder", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_25setRankOrder, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_24setRankOrder}, {"getMulti", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_27getMulti, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_26getMulti}, {"createInverse", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2SF_29createInverse, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2SF_28createInverse}, {0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscSF_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.SF", /*tp_name*/ sizeof(struct PyPetscSFObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_SF, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_SF, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_SF, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Vec __pyx_vtable_8petsc4py_5PETSc_Vec; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Vec(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscVecObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscVecObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_Vec; if (unlikely(__pyx_pw_8petsc4py_5PETSc_3Vec_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyObject *__pyx_sq_item_8petsc4py_5PETSc_Vec(PyObject *o, Py_ssize_t i) { PyObject *r; PyObject *x = PyInt_FromSsize_t(i); if(!x) return 0; r = Py_TYPE(o)->tp_as_mapping->mp_subscript(o, x); Py_DECREF(x); return r; } static int __pyx_mp_ass_subscript_8petsc4py_5PETSc_Vec(PyObject *o, PyObject *i, PyObject *v) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3Vec_31__setitem__(o, i, v); } else { if (__pyx_ptype_8petsc4py_5PETSc_Object->tp_as_mapping && __pyx_ptype_8petsc4py_5PETSc_Object->tp_as_mapping->mp_ass_subscript) return __pyx_ptype_8petsc4py_5PETSc_Object->tp_as_mapping->mp_ass_subscript(o, i, v); PyErr_Format(PyExc_NotImplementedError, "Subscript deletion not supported by %.200s", Py_TYPE(o)->tp_name); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec_sizes(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_5sizes_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3Vec_sizes(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3Vec_5sizes_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec_size(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_4size_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec_local_size(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_10local_size_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec_block_size(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_10block_size_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec_owner_range(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_11owner_range_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec_owner_ranges(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_12owner_ranges_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec_buffer_w(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_8buffer_w_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec_buffer_r(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_8buffer_r_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec_array_w(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_7array_w_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3Vec_array_w(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3Vec_7array_w_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec_array_r(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_7array_r_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec_buffer(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_6buffer_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec_array(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_5array_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3Vec_array(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3Vec_5array_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Vec___array_interface__(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Vec_19__array_interface___1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_Vec[] = { {"__enter__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_37__enter__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_36__enter__}, {"__exit__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_39__exit__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_38__exit__}, {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_41view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_40view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_43destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_42destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_45create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_44create}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_47setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_46setType}, {"setSizes", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_49setSizes, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_48setSizes}, {"createSeq", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_51createSeq, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_50createSeq}, {"createMPI", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_53createMPI, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_52createMPI}, {"createWithArray", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_55createWithArray, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_54createWithArray}, {"createGhost", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_57createGhost, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_56createGhost}, {"createGhostWithArray", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_59createGhostWithArray, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_58createGhostWithArray}, {"createShared", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_61createShared, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_60createShared}, {"createNest", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_63createNest, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_62createNest}, {"setOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_65setOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_64setOptionsPrefix}, {"getOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_67getOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_66getOptionsPrefix}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_69setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_68setFromOptions}, {"setUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_71setUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_70setUp}, {"setOption", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_73setOption, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_72setOption}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_75getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_74getType}, {"getSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_77getSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_76getSize}, {"getLocalSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_79getLocalSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_78getLocalSize}, {"getSizes", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_81getSizes, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_80getSizes}, {"setBlockSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_83setBlockSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_82setBlockSize}, {"getBlockSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_85getBlockSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_84getBlockSize}, {"getOwnershipRange", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_87getOwnershipRange, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_86getOwnershipRange}, {"getOwnershipRanges", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_89getOwnershipRanges, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_88getOwnershipRanges}, {"getBuffer", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_91getBuffer, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_90getBuffer}, {"getArray", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_93getArray, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_92getArray}, {"setArray", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_95setArray, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_94setArray}, {"placeArray", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_97placeArray, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_96placeArray}, {"resetArray", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_99resetArray, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_98resetArray}, {"getCUDAHandle", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_101getCUDAHandle, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_100getCUDAHandle}, {"restoreCUDAHandle", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_103restoreCUDAHandle, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_102restoreCUDAHandle}, {"duplicate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_105duplicate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_104duplicate}, {"copy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_107copy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_106copy}, {"chop", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_109chop, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_108chop}, {"load", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_111load, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_110load}, {"equal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_113equal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_112equal}, {"dot", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_115dot, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_114dot}, {"dotBegin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_117dotBegin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_116dotBegin}, {"dotEnd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_119dotEnd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_118dotEnd}, {"tDot", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_121tDot, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_120tDot}, {"tDotBegin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_123tDotBegin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_122tDotBegin}, {"tDotEnd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_125tDotEnd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_124tDotEnd}, {"mDot", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_127mDot, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_126mDot}, {"mDotBegin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_129mDotBegin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_128mDotBegin}, {"mDotEnd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_131mDotEnd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_130mDotEnd}, {"mtDot", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_133mtDot, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_132mtDot}, {"mtDotBegin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_135mtDotBegin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_134mtDotBegin}, {"mtDotEnd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_137mtDotEnd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_136mtDotEnd}, {"norm", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_139norm, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_138norm}, {"normBegin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_141normBegin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_140normBegin}, {"normEnd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_143normEnd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_142normEnd}, {"sum", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_145sum, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_144sum}, {"min", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_147min, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_146min}, {"max", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_149max, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_148max}, {"normalize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_151normalize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_150normalize}, {"reciprocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_153reciprocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_152reciprocal}, {"exp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_155exp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_154exp}, {"log", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_157log, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_156log}, {"sqrtabs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_159sqrtabs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_158sqrtabs}, {"abs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_161abs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_160abs}, {"conjugate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_163conjugate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_162conjugate}, {"setRandom", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_165setRandom, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_164setRandom}, {"permute", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_167permute, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_166permute}, {"zeroEntries", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_169zeroEntries, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_168zeroEntries}, {"set", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_171set, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_170set}, {"isset", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_173isset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_172isset}, {"scale", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_175scale, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_174scale}, {"shift", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_177shift, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_176shift}, {"chop", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_179chop, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_178chop}, {"swap", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_181swap, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_180swap}, {"axpy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_183axpy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_182axpy}, {"isaxpy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_185isaxpy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_184isaxpy}, {"aypx", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_187aypx, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_186aypx}, {"axpby", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_189axpby, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_188axpby}, {"waxpy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_191waxpy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_190waxpy}, {"maxpy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_193maxpy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_192maxpy}, {"pointwiseMult", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_195pointwiseMult, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_194pointwiseMult}, {"pointwiseDivide", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_197pointwiseDivide, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_196pointwiseDivide}, {"pointwiseMin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_199pointwiseMin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_198pointwiseMin}, {"pointwiseMax", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_201pointwiseMax, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_200pointwiseMax}, {"pointwiseMaxAbs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_203pointwiseMaxAbs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_202pointwiseMaxAbs}, {"maxPointwiseDivide", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_205maxPointwiseDivide, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_204maxPointwiseDivide}, {"getValue", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_207getValue, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_206getValue}, {"getValues", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_209getValues, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_208getValues}, {"setValue", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_211setValue, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_210setValue}, {"setValues", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_213setValues, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_212setValues}, {"setValuesBlocked", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_215setValuesBlocked, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_214setValuesBlocked}, {"setLGMap", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_217setLGMap, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_216setLGMap}, {"setValueLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_219setValueLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_218setValueLocal}, {"setValuesLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_221setValuesLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_220setValuesLocal}, {"setValuesBlockedLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_223setValuesBlockedLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_222setValuesBlockedLocal}, {"assemblyBegin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_225assemblyBegin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_224assemblyBegin}, {"assemblyEnd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_227assemblyEnd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_226assemblyEnd}, {"assemble", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_229assemble, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_228assemble}, {"strideScale", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_231strideScale, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_230strideScale}, {"strideSum", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_233strideSum, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_232strideSum}, {"strideMin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_235strideMin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_234strideMin}, {"strideMax", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_237strideMax, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_236strideMax}, {"strideNorm", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_239strideNorm, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_238strideNorm}, {"strideScatter", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_241strideScatter, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_240strideScatter}, {"strideGather", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_243strideGather, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_242strideGather}, {"localForm", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_245localForm, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_244localForm}, {"ghostUpdateBegin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_247ghostUpdateBegin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_246ghostUpdateBegin}, {"ghostUpdateEnd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_249ghostUpdateEnd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_248ghostUpdateEnd}, {"ghostUpdate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_251ghostUpdate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_250ghostUpdate}, {"setMPIGhost", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_253setMPIGhost, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_252setMPIGhost}, {"getSubVector", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_255getSubVector, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_254getSubVector}, {"restoreSubVector", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_257restoreSubVector, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_256restoreSubVector}, {"getNestSubVecs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_259getNestSubVecs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_258getNestSubVecs}, {"setNestSubVecs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Vec_261setNestSubVecs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Vec_260setNestSubVecs}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_Vec[] = { {(char *)"sizes", __pyx_getprop_8petsc4py_5PETSc_3Vec_sizes, __pyx_setprop_8petsc4py_5PETSc_3Vec_sizes, (char *)0, 0}, {(char *)"size", __pyx_getprop_8petsc4py_5PETSc_3Vec_size, 0, (char *)0, 0}, {(char *)"local_size", __pyx_getprop_8petsc4py_5PETSc_3Vec_local_size, 0, (char *)0, 0}, {(char *)"block_size", __pyx_getprop_8petsc4py_5PETSc_3Vec_block_size, 0, (char *)0, 0}, {(char *)"owner_range", __pyx_getprop_8petsc4py_5PETSc_3Vec_owner_range, 0, (char *)0, 0}, {(char *)"owner_ranges", __pyx_getprop_8petsc4py_5PETSc_3Vec_owner_ranges, 0, (char *)0, 0}, {(char *)"buffer_w", __pyx_getprop_8petsc4py_5PETSc_3Vec_buffer_w, 0, (char *)"Vec buffer (writable)", 0}, {(char *)"buffer_r", __pyx_getprop_8petsc4py_5PETSc_3Vec_buffer_r, 0, (char *)"Vec buffer (read-only)", 0}, {(char *)"array_w", __pyx_getprop_8petsc4py_5PETSc_3Vec_array_w, __pyx_setprop_8petsc4py_5PETSc_3Vec_array_w, (char *)"Vec array (writable)", 0}, {(char *)"array_r", __pyx_getprop_8petsc4py_5PETSc_3Vec_array_r, 0, (char *)"Vec array (read-only)", 0}, {(char *)"buffer", __pyx_getprop_8petsc4py_5PETSc_3Vec_buffer, 0, (char *)0, 0}, {(char *)"array", __pyx_getprop_8petsc4py_5PETSc_3Vec_array, __pyx_setprop_8petsc4py_5PETSc_3Vec_array, (char *)0, 0}, {(char *)"__array_interface__", __pyx_getprop_8petsc4py_5PETSc_3Vec___array_interface__, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyNumberMethods __pyx_tp_as_number_Vec = { __pyx_pw_8petsc4py_5PETSc_3Vec_19__add__, /*nb_add*/ __pyx_pw_8petsc4py_5PETSc_3Vec_21__sub__, /*nb_subtract*/ __pyx_pw_8petsc4py_5PETSc_3Vec_23__mul__, /*nb_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY __pyx_pw_8petsc4py_5PETSc_3Vec_25__div__, /*nb_divide*/ #endif 0, /*nb_remainder*/ 0, /*nb_divmod*/ 0, /*nb_power*/ __pyx_pw_8petsc4py_5PETSc_3Vec_5__neg__, /*nb_negative*/ __pyx_pw_8petsc4py_5PETSc_3Vec_3__pos__, /*nb_positive*/ __pyx_pw_8petsc4py_5PETSc_3Vec_7__abs__, /*nb_absolute*/ #if CYTHON_COMPILING_IN_PYPY __pyx_pw_8petsc4py_5PETSc_6Object_7__nonzero__, /*nb_nonzero*/ #else 0, /*nb_nonzero*/ #endif 0, /*nb_invert*/ 0, /*nb_lshift*/ 0, /*nb_rshift*/ 0, /*nb_and*/ 0, /*nb_xor*/ 0, /*nb_or*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_coerce*/ #endif 0, /*nb_int*/ #if PY_MAJOR_VERSION < 3 0, /*nb_long*/ #else 0, /*reserved*/ #endif 0, /*nb_float*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_oct*/ #endif #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_hex*/ #endif __pyx_pw_8petsc4py_5PETSc_3Vec_9__iadd__, /*nb_inplace_add*/ __pyx_pw_8petsc4py_5PETSc_3Vec_11__isub__, /*nb_inplace_subtract*/ __pyx_pw_8petsc4py_5PETSc_3Vec_13__imul__, /*nb_inplace_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY __pyx_pw_8petsc4py_5PETSc_3Vec_15__idiv__, /*nb_inplace_divide*/ #endif 0, /*nb_inplace_remainder*/ 0, /*nb_inplace_power*/ 0, /*nb_inplace_lshift*/ 0, /*nb_inplace_rshift*/ 0, /*nb_inplace_and*/ 0, /*nb_inplace_xor*/ 0, /*nb_inplace_or*/ 0, /*nb_floor_divide*/ __pyx_pw_8petsc4py_5PETSc_3Vec_27__truediv__, /*nb_true_divide*/ 0, /*nb_inplace_floor_divide*/ __pyx_pw_8petsc4py_5PETSc_3Vec_17__itruediv__, /*nb_inplace_true_divide*/ 0, /*nb_index*/ #if PY_VERSION_HEX >= 0x03050000 0, /*nb_matrix_multiply*/ #endif #if PY_VERSION_HEX >= 0x03050000 0, /*nb_inplace_matrix_multiply*/ #endif }; static PySequenceMethods __pyx_tp_as_sequence_Vec = { 0, /*sq_length*/ 0, /*sq_concat*/ 0, /*sq_repeat*/ __pyx_sq_item_8petsc4py_5PETSc_Vec, /*sq_item*/ 0, /*sq_slice*/ 0, /*sq_ass_item*/ 0, /*sq_ass_slice*/ 0, /*sq_contains*/ 0, /*sq_inplace_concat*/ 0, /*sq_inplace_repeat*/ }; static PyMappingMethods __pyx_tp_as_mapping_Vec = { 0, /*mp_length*/ __pyx_pw_8petsc4py_5PETSc_3Vec_29__getitem__, /*mp_subscript*/ __pyx_mp_ass_subscript_8petsc4py_5PETSc_Vec, /*mp_ass_subscript*/ }; static PyBufferProcs __pyx_tp_as_buffer_Vec = { #if PY_MAJOR_VERSION < 3 0, /*bf_getreadbuffer*/ #endif #if PY_MAJOR_VERSION < 3 0, /*bf_getwritebuffer*/ #endif #if PY_MAJOR_VERSION < 3 0, /*bf_getsegcount*/ #endif #if PY_MAJOR_VERSION < 3 0, /*bf_getcharbuffer*/ #endif __pyx_pw_8petsc4py_5PETSc_3Vec_33__getbuffer__, /*bf_getbuffer*/ __pyx_pw_8petsc4py_5PETSc_3Vec_35__releasebuffer__, /*bf_releasebuffer*/ }; DL_EXPORT(PyTypeObject) PyPetscVec_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.Vec", /*tp_name*/ sizeof(struct PyPetscVecObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ &__pyx_tp_as_number_Vec, /*tp_as_number*/ &__pyx_tp_as_sequence_Vec, /*tp_as_sequence*/ &__pyx_tp_as_mapping_Vec, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ &__pyx_tp_as_buffer_Vec, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_Vec, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_Vec, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_Vec, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Scatter __pyx_vtable_8petsc4py_5PETSc_Scatter; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Scatter(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscScatterObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscScatterObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_Scatter; if (unlikely(__pyx_pw_8petsc4py_5PETSc_7Scatter_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_Scatter[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Scatter_5view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Scatter_4view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Scatter_7destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Scatter_6destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Scatter_9create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Scatter_8create}, {"copy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Scatter_11copy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Scatter_10copy}, {"toAll", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Scatter_13toAll, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Scatter_12toAll}, {"toZero", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Scatter_15toZero, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Scatter_14toZero}, {"begin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Scatter_17begin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Scatter_16begin}, {"end", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Scatter_19end, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Scatter_18end}, {"scatterBegin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Scatter_21scatterBegin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Scatter_20scatterBegin}, {"scatterEnd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Scatter_23scatterEnd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Scatter_22scatterEnd}, {"scatter", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Scatter_25scatter, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Scatter_24scatter}, {0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscScatter_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.Scatter", /*tp_name*/ sizeof(struct PyPetscScatterObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ __pyx_pw_8petsc4py_5PETSc_7Scatter_3__call__, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_Scatter, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_Scatter, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Section __pyx_vtable_8petsc4py_5PETSc_Section; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Section(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscSectionObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscSectionObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_Section; if (unlikely(__pyx_pw_8petsc4py_5PETSc_7Section_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc_Section(PyObject *o) { #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif PyObject_GC_UnTrack(o); { PyObject *etype, *eval, *etb; PyErr_Fetch(&etype, &eval, &etb); ++Py_REFCNT(o); __pyx_pw_8petsc4py_5PETSc_7Section_3__dealloc__(o); --Py_REFCNT(o); PyErr_Restore(etype, eval, etb); } PyObject_GC_Track(o); __pyx_tp_dealloc_8petsc4py_5PETSc_Object(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_Section[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_5view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_4view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_7destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_6destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_9create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_8create}, {"clone", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_11clone, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_10clone}, {"setUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_13setUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_12setUp}, {"reset", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_15reset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_14reset}, {"getNumFields", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_17getNumFields, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_16getNumFields}, {"setNumFields", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_19setNumFields, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_18setNumFields}, {"getFieldName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_21getFieldName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_20getFieldName}, {"setFieldName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_23setFieldName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_22setFieldName}, {"getFieldComponents", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_25getFieldComponents, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_24getFieldComponents}, {"setFieldComponents", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_27setFieldComponents, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_26setFieldComponents}, {"getChart", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_29getChart, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_28getChart}, {"setChart", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_31setChart, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_30setChart}, {"getDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_33getDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_32getDof}, {"setDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_35setDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_34setDof}, {"addDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_37addDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_36addDof}, {"getFieldDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_39getFieldDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_38getFieldDof}, {"setFieldDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_41setFieldDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_40setFieldDof}, {"addFieldDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_43addFieldDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_42addFieldDof}, {"getConstraintDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_45getConstraintDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_44getConstraintDof}, {"setConstraintDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_47setConstraintDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_46setConstraintDof}, {"addConstraintDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_49addConstraintDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_48addConstraintDof}, {"getFieldConstraintDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_51getFieldConstraintDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_50getFieldConstraintDof}, {"setFieldConstraintDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_53setFieldConstraintDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_52setFieldConstraintDof}, {"addFieldConstraintDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_55addFieldConstraintDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_54addFieldConstraintDof}, {"getConstraintIndices", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_57getConstraintIndices, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_56getConstraintIndices}, {"setConstraintIndices", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_59setConstraintIndices, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_58setConstraintIndices}, {"getFieldConstraintIndices", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_61getFieldConstraintIndices, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_60getFieldConstraintIndices}, {"setFieldConstraintIndices", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_63setFieldConstraintIndices, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_62setFieldConstraintIndices}, {"getMaxDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_65getMaxDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_64getMaxDof}, {"getStorageSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_67getStorageSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_66getStorageSize}, {"getConstrainedStorageSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_69getConstrainedStorageSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_68getConstrainedStorageSize}, {"getOffset", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_71getOffset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_70getOffset}, {"setOffset", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_73setOffset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_72setOffset}, {"getOffsetRange", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_75getOffsetRange, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_74getOffsetRange}, {"createGlobalSection", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Section_77createGlobalSection, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Section_76createGlobalSection}, {0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscSection_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.Section", /*tp_name*/ sizeof(struct PyPetscSectionObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Section, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_Section, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_Section, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Mat __pyx_vtable_8petsc4py_5PETSc_Mat; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Mat(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscMatObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscMatObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_Mat; if (unlikely(__pyx_pw_8petsc4py_5PETSc_3Mat_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyObject *__pyx_sq_item_8petsc4py_5PETSc_Mat(PyObject *o, Py_ssize_t i) { PyObject *r; PyObject *x = PyInt_FromSsize_t(i); if(!x) return 0; r = Py_TYPE(o)->tp_as_mapping->mp_subscript(o, x); Py_DECREF(x); return r; } static int __pyx_mp_ass_subscript_8petsc4py_5PETSc_Mat(PyObject *o, PyObject *i, PyObject *v) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3Mat_29__setitem__(o, i, v); } else { if (__pyx_ptype_8petsc4py_5PETSc_Object->tp_as_mapping && __pyx_ptype_8petsc4py_5PETSc_Object->tp_as_mapping->mp_ass_subscript) return __pyx_ptype_8petsc4py_5PETSc_Object->tp_as_mapping->mp_ass_subscript(o, i, v); PyErr_Format(PyExc_NotImplementedError, "Subscript deletion not supported by %.200s", Py_TYPE(o)->tp_name); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Mat_sizes(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Mat_5sizes_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3Mat_sizes(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3Mat_5sizes_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Mat_size(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Mat_4size_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Mat_local_size(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Mat_10local_size_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Mat_block_size(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Mat_10block_size_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Mat_block_sizes(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Mat_11block_sizes_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Mat_owner_range(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Mat_11owner_range_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Mat_owner_ranges(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Mat_12owner_ranges_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Mat_assembled(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Mat_9assembled_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Mat_symmetric(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Mat_9symmetric_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Mat_hermitian(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Mat_9hermitian_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3Mat_structsymm(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3Mat_10structsymm_1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_Mat[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_33view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_32view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_35destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_34destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_37create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_36create}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_39setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_38setType}, {"setSizes", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_41setSizes, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_40setSizes}, {"setBlockSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_43setBlockSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_42setBlockSize}, {"setBlockSizes", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_45setBlockSizes, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_44setBlockSizes}, {"createAIJ", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_47createAIJ, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_46createAIJ}, {"createBAIJ", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_49createBAIJ, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_48createBAIJ}, {"createSBAIJ", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_51createSBAIJ, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_50createSBAIJ}, {"createAIJCRL", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_53createAIJCRL, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_52createAIJCRL}, {"setPreallocationNNZ", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_55setPreallocationNNZ, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_54setPreallocationNNZ}, {"setPreallocationCSR", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_57setPreallocationCSR, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_56setPreallocationCSR}, {"createAIJWithArrays", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_59createAIJWithArrays, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_58createAIJWithArrays}, {"createDense", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_61createDense, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_60createDense}, {"setPreallocationDense", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_63setPreallocationDense, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_62setPreallocationDense}, {"createScatter", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_65createScatter, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_64createScatter}, {"createNormal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_67createNormal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_66createNormal}, {"createTranspose", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_69createTranspose, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_68createTranspose}, {"createLRC", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_71createLRC, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_70createLRC}, {"createSubMatrix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_73createSubMatrix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_72createSubMatrix}, {"createNest", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_75createNest, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_74createNest}, {"createPython", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_77createPython, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_76createPython}, {"setPythonContext", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_79setPythonContext, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_78setPythonContext}, {"getPythonContext", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_81getPythonContext, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_80getPythonContext}, {"setPythonType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_83setPythonType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_82setPythonType}, {"setOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_85setOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_84setOptionsPrefix}, {"getOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_87getOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_86getOptionsPrefix}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_89setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_88setFromOptions}, {"setUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_91setUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_90setUp}, {"setOption", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_93setOption, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_92setOption}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_95getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_94getType}, {"getSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_97getSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_96getSize}, {"getLocalSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_99getLocalSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_98getLocalSize}, {"getSizes", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_101getSizes, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_100getSizes}, {"getBlockSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_103getBlockSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_102getBlockSize}, {"getBlockSizes", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_105getBlockSizes, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_104getBlockSizes}, {"getOwnershipRange", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_107getOwnershipRange, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_106getOwnershipRange}, {"getOwnershipRanges", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_109getOwnershipRanges, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_108getOwnershipRanges}, {"getOwnershipRangeColumn", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_111getOwnershipRangeColumn, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_110getOwnershipRangeColumn}, {"getOwnershipRangesColumn", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_113getOwnershipRangesColumn, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_112getOwnershipRangesColumn}, {"getOwnershipIS", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_115getOwnershipIS, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_114getOwnershipIS}, {"getInfo", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_117getInfo, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_116getInfo}, {"duplicate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_119duplicate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_118duplicate}, {"copy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_121copy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_120copy}, {"load", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_123load, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_122load}, {"convert", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_125convert, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_124convert}, {"transpose", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_127transpose, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_126transpose}, {"realPart", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_129realPart, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_128realPart}, {"imagPart", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_131imagPart, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_130imagPart}, {"conjugate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_133conjugate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_132conjugate}, {"permute", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_135permute, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_134permute}, {"equal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_137equal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_136equal}, {"isTranspose", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_139isTranspose, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_138isTranspose}, {"isSymmetric", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_141isSymmetric, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_140isSymmetric}, {"isSymmetricKnown", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_143isSymmetricKnown, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_142isSymmetricKnown}, {"isHermitian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_145isHermitian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_144isHermitian}, {"isHermitianKnown", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_147isHermitianKnown, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_146isHermitianKnown}, {"isStructurallySymmetric", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_149isStructurallySymmetric, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_148isStructurallySymmetric}, {"zeroEntries", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_151zeroEntries, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_150zeroEntries}, {"getValue", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_153getValue, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_152getValue}, {"getValues", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_155getValues, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_154getValues}, {"getValuesCSR", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_157getValuesCSR, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_156getValuesCSR}, {"getRow", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_159getRow, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_158getRow}, {"getRowIJ", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_161getRowIJ, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_160getRowIJ}, {"getColumnIJ", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_163getColumnIJ, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_162getColumnIJ}, {"setValue", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_165setValue, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_164setValue}, {"setValues", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_167setValues, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_166setValues}, {"setValuesRCV", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_169setValuesRCV, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_168setValuesRCV}, {"setValuesIJV", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_171setValuesIJV, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_170setValuesIJV}, {"setValuesCSR", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_173setValuesCSR, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_172setValuesCSR}, {"setValuesBlocked", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_175setValuesBlocked, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_174setValuesBlocked}, {"setValuesBlockedRCV", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_177setValuesBlockedRCV, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_176setValuesBlockedRCV}, {"setValuesBlockedIJV", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_179setValuesBlockedIJV, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_178setValuesBlockedIJV}, {"setValuesBlockedCSR", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_181setValuesBlockedCSR, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_180setValuesBlockedCSR}, {"setLGMap", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_183setLGMap, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_182setLGMap}, {"setValueLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_185setValueLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_184setValueLocal}, {"setValuesLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_187setValuesLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_186setValuesLocal}, {"setValuesLocalRCV", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_189setValuesLocalRCV, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_188setValuesLocalRCV}, {"setValuesLocalIJV", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_191setValuesLocalIJV, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_190setValuesLocalIJV}, {"setValuesLocalCSR", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_193setValuesLocalCSR, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_192setValuesLocalCSR}, {"setValuesBlockedLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_195setValuesBlockedLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_194setValuesBlockedLocal}, {"setValuesBlockedLocalRCV", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_197setValuesBlockedLocalRCV, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_196setValuesBlockedLocalRCV}, {"setValuesBlockedLocalIJV", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_199setValuesBlockedLocalIJV, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_198setValuesBlockedLocalIJV}, {"setValuesBlockedLocalCSR", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_201setValuesBlockedLocalCSR, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_200setValuesBlockedLocalCSR}, {"setStencil", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_203setStencil, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_202setStencil}, {"setValueStencil", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_205setValueStencil, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_204setValueStencil}, {"setValueBlockedStencil", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_207setValueBlockedStencil, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_206setValueBlockedStencil}, {"zeroRows", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_209zeroRows, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_208zeroRows}, {"zeroRowsLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_211zeroRowsLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_210zeroRowsLocal}, {"zeroRowsColumns", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_213zeroRowsColumns, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_212zeroRowsColumns}, {"storeValues", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_215storeValues, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_214storeValues}, {"retrieveValues", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_217retrieveValues, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_216retrieveValues}, {"assemblyBegin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_219assemblyBegin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_218assemblyBegin}, {"assemblyEnd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_221assemblyEnd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_220assemblyEnd}, {"assemble", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_223assemble, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_222assemble}, {"isAssembled", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_225isAssembled, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_224isAssembled}, {"createVecs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_227createVecs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_226createVecs}, {"createVecRight", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_229createVecRight, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_228createVecRight}, {"createVecLeft", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_231createVecLeft, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_230createVecLeft}, {"getColumnVector", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_233getColumnVector, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_232getColumnVector}, {"getRedundantMatrix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_235getRedundantMatrix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_234getRedundantMatrix}, {"getDiagonal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_237getDiagonal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_236getDiagonal}, {"getRowSum", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_239getRowSum, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_238getRowSum}, {"setDiagonal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_241setDiagonal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_240setDiagonal}, {"diagonalScale", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_243diagonalScale, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_242diagonalScale}, {"invertBlockDiagonal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_245invertBlockDiagonal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_244invertBlockDiagonal}, {"setNullSpace", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_247setNullSpace, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_246setNullSpace}, {"getNullSpace", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_249getNullSpace, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_248getNullSpace}, {"setNearNullSpace", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_251setNearNullSpace, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_250setNearNullSpace}, {"getNearNullSpace", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_253getNearNullSpace, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_252getNearNullSpace}, {"mult", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_255mult, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_254mult}, {"multAdd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_257multAdd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_256multAdd}, {"multTranspose", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_259multTranspose, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_258multTranspose}, {"multTransposeAdd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_261multTransposeAdd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_260multTransposeAdd}, {"multHermitian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_263multHermitian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_262multHermitian}, {"multHermitianAdd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_265multHermitianAdd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_264multHermitianAdd}, {"SOR", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_267SOR, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_266SOR}, {"getDiagonalBlock", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_269getDiagonalBlock, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_268getDiagonalBlock}, {"increaseOverlap", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_271increaseOverlap, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_270increaseOverlap}, {"getSubMatrix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_273getSubMatrix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_272getSubMatrix}, {"getSubMatrices", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_275getSubMatrices, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_274getSubMatrices}, {"getLocalSubMatrix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_277getLocalSubMatrix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_276getLocalSubMatrix}, {"restoreLocalSubMatrix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_279restoreLocalSubMatrix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_278restoreLocalSubMatrix}, {"norm", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_281norm, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_280norm}, {"scale", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_283scale, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_282scale}, {"shift", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_285shift, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_284shift}, {"chop", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_287chop, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_286chop}, {"axpy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_289axpy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_288axpy}, {"aypx", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_291aypx, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_290aypx}, {"matMultSymbolic", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_293matMultSymbolic, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_292matMultSymbolic}, {"matMultNumeric", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_295matMultNumeric, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_294matMultNumeric}, {"matMult", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_297matMult, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_296matMult}, {"matTransposeMult", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_299matTransposeMult, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_298matTransposeMult}, {"transposeMatMult", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_301transposeMatMult, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_300transposeMatMult}, {"getOrdering", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_303getOrdering, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_302getOrdering}, {"reorderForNonzeroDiagonal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_305reorderForNonzeroDiagonal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_304reorderForNonzeroDiagonal}, {"factorLU", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_307factorLU, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_306factorLU}, {"factorSymbolicLU", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_309factorSymbolicLU, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_308factorSymbolicLU}, {"factorNumericLU", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_311factorNumericLU, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_310factorNumericLU}, {"factorILU", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_313factorILU, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_312factorILU}, {"factorSymbolicILU", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_315factorSymbolicILU, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_314factorSymbolicILU}, {"factorCholesky", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_317factorCholesky, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_316factorCholesky}, {"factorSymbolicCholesky", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_319factorSymbolicCholesky, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_318factorSymbolicCholesky}, {"factorNumericCholesky", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_321factorNumericCholesky, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_320factorNumericCholesky}, {"factorICC", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_323factorICC, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_322factorICC}, {"factorSymbolicICC", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_325factorSymbolicICC, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_324factorSymbolicICC}, {"getInertia", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_327getInertia, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_326getInertia}, {"setUnfactored", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_329setUnfactored, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_328setUnfactored}, {"setMumpsIcntl", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_331setMumpsIcntl, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_330setMumpsIcntl}, {"getMumpsIcntl", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_333getMumpsIcntl, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_332getMumpsIcntl}, {"setMumpsCntl", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_335setMumpsCntl, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_334setMumpsCntl}, {"getMumpsCntl", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_337getMumpsCntl, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_336getMumpsCntl}, {"getMumpsInfo", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_339getMumpsInfo, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_338getMumpsInfo}, {"getMumpsInfog", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_341getMumpsInfog, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_340getMumpsInfog}, {"getMumpsRinfo", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_343getMumpsRinfo, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_342getMumpsRinfo}, {"getMumpsRinfog", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_345getMumpsRinfog, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_344getMumpsRinfog}, {"solveForward", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_347solveForward, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_346solveForward}, {"solveBackward", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_349solveBackward, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_348solveBackward}, {"solve", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_351solve, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_350solve}, {"solveTranspose", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_353solveTranspose, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_352solveTranspose}, {"solveAdd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_355solveAdd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_354solveAdd}, {"solveTransposeAdd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_357solveTransposeAdd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_356solveTransposeAdd}, {"matSolve", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_359matSolve, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_358matSolve}, {"getDenseArray", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_361getDenseArray, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_360getDenseArray}, {"getDenseLocalMatrix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Mat_363getDenseLocalMatrix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Mat_362getDenseLocalMatrix}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_Mat[] = { {(char *)"sizes", __pyx_getprop_8petsc4py_5PETSc_3Mat_sizes, __pyx_setprop_8petsc4py_5PETSc_3Mat_sizes, (char *)0, 0}, {(char *)"size", __pyx_getprop_8petsc4py_5PETSc_3Mat_size, 0, (char *)0, 0}, {(char *)"local_size", __pyx_getprop_8petsc4py_5PETSc_3Mat_local_size, 0, (char *)0, 0}, {(char *)"block_size", __pyx_getprop_8petsc4py_5PETSc_3Mat_block_size, 0, (char *)0, 0}, {(char *)"block_sizes", __pyx_getprop_8petsc4py_5PETSc_3Mat_block_sizes, 0, (char *)0, 0}, {(char *)"owner_range", __pyx_getprop_8petsc4py_5PETSc_3Mat_owner_range, 0, (char *)0, 0}, {(char *)"owner_ranges", __pyx_getprop_8petsc4py_5PETSc_3Mat_owner_ranges, 0, (char *)0, 0}, {(char *)"assembled", __pyx_getprop_8petsc4py_5PETSc_3Mat_assembled, 0, (char *)0, 0}, {(char *)"symmetric", __pyx_getprop_8petsc4py_5PETSc_3Mat_symmetric, 0, (char *)0, 0}, {(char *)"hermitian", __pyx_getprop_8petsc4py_5PETSc_3Mat_hermitian, 0, (char *)0, 0}, {(char *)"structsymm", __pyx_getprop_8petsc4py_5PETSc_3Mat_structsymm, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyNumberMethods __pyx_tp_as_number_Mat = { __pyx_pw_8petsc4py_5PETSc_3Mat_17__add__, /*nb_add*/ __pyx_pw_8petsc4py_5PETSc_3Mat_19__sub__, /*nb_subtract*/ __pyx_pw_8petsc4py_5PETSc_3Mat_21__mul__, /*nb_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY __pyx_pw_8petsc4py_5PETSc_3Mat_23__div__, /*nb_divide*/ #endif 0, /*nb_remainder*/ 0, /*nb_divmod*/ 0, /*nb_power*/ __pyx_pw_8petsc4py_5PETSc_3Mat_5__neg__, /*nb_negative*/ __pyx_pw_8petsc4py_5PETSc_3Mat_3__pos__, /*nb_positive*/ 0, /*nb_absolute*/ #if CYTHON_COMPILING_IN_PYPY __pyx_pw_8petsc4py_5PETSc_6Object_7__nonzero__, /*nb_nonzero*/ #else 0, /*nb_nonzero*/ #endif 0, /*nb_invert*/ 0, /*nb_lshift*/ 0, /*nb_rshift*/ 0, /*nb_and*/ 0, /*nb_xor*/ 0, /*nb_or*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_coerce*/ #endif 0, /*nb_int*/ #if PY_MAJOR_VERSION < 3 0, /*nb_long*/ #else 0, /*reserved*/ #endif 0, /*nb_float*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_oct*/ #endif #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_hex*/ #endif __pyx_pw_8petsc4py_5PETSc_3Mat_7__iadd__, /*nb_inplace_add*/ __pyx_pw_8petsc4py_5PETSc_3Mat_9__isub__, /*nb_inplace_subtract*/ __pyx_pw_8petsc4py_5PETSc_3Mat_11__imul__, /*nb_inplace_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY __pyx_pw_8petsc4py_5PETSc_3Mat_13__idiv__, /*nb_inplace_divide*/ #endif 0, /*nb_inplace_remainder*/ 0, /*nb_inplace_power*/ 0, /*nb_inplace_lshift*/ 0, /*nb_inplace_rshift*/ 0, /*nb_inplace_and*/ 0, /*nb_inplace_xor*/ 0, /*nb_inplace_or*/ 0, /*nb_floor_divide*/ __pyx_pw_8petsc4py_5PETSc_3Mat_25__truediv__, /*nb_true_divide*/ 0, /*nb_inplace_floor_divide*/ __pyx_pw_8petsc4py_5PETSc_3Mat_15__itruediv__, /*nb_inplace_true_divide*/ 0, /*nb_index*/ #if PY_VERSION_HEX >= 0x03050000 0, /*nb_matrix_multiply*/ #endif #if PY_VERSION_HEX >= 0x03050000 0, /*nb_inplace_matrix_multiply*/ #endif }; static PySequenceMethods __pyx_tp_as_sequence_Mat = { 0, /*sq_length*/ 0, /*sq_concat*/ 0, /*sq_repeat*/ __pyx_sq_item_8petsc4py_5PETSc_Mat, /*sq_item*/ 0, /*sq_slice*/ 0, /*sq_ass_item*/ 0, /*sq_ass_slice*/ 0, /*sq_contains*/ 0, /*sq_inplace_concat*/ 0, /*sq_inplace_repeat*/ }; static PyMappingMethods __pyx_tp_as_mapping_Mat = { 0, /*mp_length*/ __pyx_pw_8petsc4py_5PETSc_3Mat_27__getitem__, /*mp_subscript*/ __pyx_mp_ass_subscript_8petsc4py_5PETSc_Mat, /*mp_ass_subscript*/ }; DL_EXPORT(PyTypeObject) PyPetscMat_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.Mat", /*tp_name*/ sizeof(struct PyPetscMatObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ &__pyx_tp_as_number_Mat, /*tp_as_number*/ &__pyx_tp_as_sequence_Mat, /*tp_as_sequence*/ &__pyx_tp_as_mapping_Mat, /*tp_as_mapping*/ 0, /*tp_hash*/ __pyx_pw_8petsc4py_5PETSc_3Mat_31__call__, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_Mat, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_Mat, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_Mat, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_NullSpace __pyx_vtable_8petsc4py_5PETSc_NullSpace; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_NullSpace(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscNullSpaceObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscNullSpaceObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_NullSpace; if (unlikely(__pyx_pw_8petsc4py_5PETSc_9NullSpace_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_NullSpace[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_9NullSpace_5view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_9NullSpace_4view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_9NullSpace_7destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_9NullSpace_6destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_9NullSpace_9create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_9NullSpace_8create}, {"createRigidBody", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_9NullSpace_11createRigidBody, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_9NullSpace_10createRigidBody}, {"setFunction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_9NullSpace_13setFunction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_9NullSpace_12setFunction}, {"hasConstant", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_9NullSpace_15hasConstant, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_9NullSpace_14hasConstant}, {"getVecs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_9NullSpace_17getVecs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_9NullSpace_16getVecs}, {"getFunction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_9NullSpace_19getFunction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_9NullSpace_18getFunction}, {"remove", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_9NullSpace_21remove, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_9NullSpace_20remove}, {0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscNullSpace_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.NullSpace", /*tp_name*/ sizeof(struct PyPetscNullSpaceObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ __pyx_pw_8petsc4py_5PETSc_9NullSpace_3__call__, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_NullSpace, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_NullSpace, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_PC __pyx_vtable_8petsc4py_5PETSc_PC; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_PC(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscPCObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscPCObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_PC; if (unlikely(__pyx_pw_8petsc4py_5PETSc_2PC_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_PC[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_5view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_4view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_7destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_6destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_9create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_8create}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_11setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_10setType}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_13getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_12getType}, {"setOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_15setOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_14setOptionsPrefix}, {"getOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_17getOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_16getOptionsPrefix}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_19setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_18setFromOptions}, {"setOperators", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_21setOperators, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_20setOperators}, {"getOperators", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_23getOperators, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_22getOperators}, {"setUseAmat", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_25setUseAmat, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_24setUseAmat}, {"setUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_27setUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_26setUp}, {"reset", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_29reset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_28reset}, {"setUpOnBlocks", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_31setUpOnBlocks, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_30setUpOnBlocks}, {"apply", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_33apply, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_32apply}, {"applyTranspose", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_35applyTranspose, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_34applyTranspose}, {"applySymmetricLeft", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_37applySymmetricLeft, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_36applySymmetricLeft}, {"applySymmetricRight", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_39applySymmetricRight, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_38applySymmetricRight}, {"getDM", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_41getDM, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_40getDM}, {"setDM", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_43setDM, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_42setDM}, {"setCoordinates", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_45setCoordinates, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_44setCoordinates}, {"createPython", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_47createPython, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_46createPython}, {"setPythonContext", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_49setPythonContext, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_48setPythonContext}, {"getPythonContext", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_51getPythonContext, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_50getPythonContext}, {"setPythonType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_53setPythonType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_52setPythonType}, {"setASMType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_55setASMType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_54setASMType}, {"setASMOverlap", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_57setASMOverlap, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_56setASMOverlap}, {"setASMLocalSubdomains", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_59setASMLocalSubdomains, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_58setASMLocalSubdomains}, {"setASMTotalSubdomains", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_61setASMTotalSubdomains, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_60setASMTotalSubdomains}, {"getASMSubKSP", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_63getASMSubKSP, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_62getASMSubKSP}, {"setGASMType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_65setGASMType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_64setGASMType}, {"setGASMOverlap", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_67setGASMOverlap, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_66setGASMOverlap}, {"setGAMGType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_69setGAMGType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_68setGAMGType}, {"setGAMGLevels", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_71setGAMGLevels, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_70setGAMGLevels}, {"setGAMGSmooths", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_73setGAMGSmooths, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_72setGAMGSmooths}, {"getHYPREType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_75getHYPREType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_74getHYPREType}, {"setHYPREType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_77setHYPREType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_76setHYPREType}, {"setHYPREDiscreteCurl", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_79setHYPREDiscreteCurl, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_78setHYPREDiscreteCurl}, {"setHYPREDiscreteGradient", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_81setHYPREDiscreteGradient, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_80setHYPREDiscreteGradient}, {"setHYPRESetAlphaPoissonMatrix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_83setHYPRESetAlphaPoissonMatrix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_82setHYPRESetAlphaPoissonMatrix}, {"setHYPRESetBetaPoissonMatrix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_85setHYPRESetBetaPoissonMatrix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_84setHYPRESetBetaPoissonMatrix}, {"setHYPRESetEdgeConstantVectors", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_87setHYPRESetEdgeConstantVectors, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_86setHYPRESetEdgeConstantVectors}, {"setFactorSolverPackage", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_89setFactorSolverPackage, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_88setFactorSolverPackage}, {"getFactorSolverPackage", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_91getFactorSolverPackage, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_90getFactorSolverPackage}, {"setFactorOrdering", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_93setFactorOrdering, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_92setFactorOrdering}, {"setFactorPivot", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_95setFactorPivot, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_94setFactorPivot}, {"setFactorShift", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_97setFactorShift, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_96setFactorShift}, {"setFactorLevels", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_99setFactorLevels, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_98setFactorLevels}, {"getFactorMatrix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_101getFactorMatrix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_100getFactorMatrix}, {"setFieldSplitType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_103setFieldSplitType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_102setFieldSplitType}, {"setFieldSplitIS", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_105setFieldSplitIS, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_104setFieldSplitIS}, {"setFieldSplitFields", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_107setFieldSplitFields, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_106setFieldSplitFields}, {"getFieldSplitSubKSP", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_109getFieldSplitSubKSP, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_108getFieldSplitSubKSP}, {"setFieldSplitSchurFactType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_111setFieldSplitSchurFactType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_110setFieldSplitSchurFactType}, {"setFieldSplitSchurPreType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_113setFieldSplitSchurPreType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_112setFieldSplitSchurPreType}, {"setReusePreconditioner", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_115setReusePreconditioner, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_114setReusePreconditioner}, {"setCompositeType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_117setCompositeType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_116setCompositeType}, {"getCompositePC", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_119getCompositePC, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_118getCompositePC}, {"addCompositePC", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_121addCompositePC, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_120addCompositePC}, {"getKSP", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_123getKSP, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_122getKSP}, {"getMGType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_125getMGType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_124getMGType}, {"setMGType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_127setMGType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_126setMGType}, {"getMGLevels", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_129getMGLevels, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_128getMGLevels}, {"getMGCoarseSolve", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_131getMGCoarseSolve, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_130getMGCoarseSolve}, {"setMGInterpolation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_133setMGInterpolation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_132setMGInterpolation}, {"getMGInterpolation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_135getMGInterpolation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_134getMGInterpolation}, {"setMGRestriction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_137setMGRestriction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_136setMGRestriction}, {"getMGRestriction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_139getMGRestriction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_138getMGRestriction}, {"setMGRScale", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_141setMGRScale, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_140setMGRScale}, {"getMGRScale", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_143getMGRScale, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_142getMGRScale}, {"getMGSmoother", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_145getMGSmoother, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_144getMGSmoother}, {"getMGSmootherDown", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_147getMGSmootherDown, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_146getMGSmootherDown}, {"getMGSmootherUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_149getMGSmootherUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_148getMGSmootherUp}, {"setMGCyclesOnLevel", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_151setMGCyclesOnLevel, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_150setMGCyclesOnLevel}, {"setMGRhs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_153setMGRhs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_152setMGRhs}, {"setMGX", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_155setMGX, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_154setMGX}, {"setMGR", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2PC_157setMGR, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2PC_156setMGR}, {0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscPC_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.PC", /*tp_name*/ sizeof(struct PyPetscPCObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ __pyx_pw_8petsc4py_5PETSc_2PC_3__call__, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_PC, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_PC, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_KSP __pyx_vtable_8petsc4py_5PETSc_KSP; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_KSP(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscKSPObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscKSPObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_KSP; if (unlikely(__pyx_pw_8petsc4py_5PETSc_3KSP_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_appctx(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_6appctx_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_appctx(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_6appctx_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_dm(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_2dm_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_dm(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_2dm_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_vec_sol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_7vec_sol_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_vec_rhs(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_7vec_rhs_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_mat_op(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_6mat_op_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_mat_pc(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_6mat_pc_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_guess_nonzero(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_13guess_nonzero_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_guess_nonzero(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_13guess_nonzero_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_guess_knoll(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_11guess_knoll_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_guess_knoll(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_11guess_knoll_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_pc(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_2pc_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_pc_side(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_7pc_side_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_pc_side(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_7pc_side_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_norm_type(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_9norm_type_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_norm_type(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_9norm_type_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_rtol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_4rtol_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_rtol(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_4rtol_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_atol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_4atol_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_atol(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_4atol_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_divtol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_6divtol_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_divtol(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_6divtol_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_max_it(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_6max_it_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_max_it(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_6max_it_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_its(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_3its_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_its(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_3its_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_norm(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_4norm_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_norm(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_4norm_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_history(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_7history_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_reason(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_6reason_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3KSP_reason(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3KSP_6reason_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_iterating(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_9iterating_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_converged(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_9converged_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3KSP_diverged(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3KSP_8diverged_1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_KSP[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_5view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_4view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_7destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_6destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_9create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_8create}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_11setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_10setType}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_13getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_12getType}, {"setOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_15setOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_14setOptionsPrefix}, {"getOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_17getOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_16getOptionsPrefix}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_19setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_18setFromOptions}, {"setAppCtx", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_21setAppCtx, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_20setAppCtx}, {"getAppCtx", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_23getAppCtx, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_22getAppCtx}, {"getDM", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_25getDM, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_24getDM}, {"setDM", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_27setDM, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_26setDM}, {"setDMActive", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_29setDMActive, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_28setDMActive}, {"setComputeRHS", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_31setComputeRHS, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_30setComputeRHS}, {"setComputeOperators", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_33setComputeOperators, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_32setComputeOperators}, {"setOperators", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_35setOperators, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_34setOperators}, {"getOperators", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_37getOperators, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_36getOperators}, {"setPC", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_39setPC, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_38setPC}, {"getPC", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_41getPC, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_40getPC}, {"setTolerances", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_43setTolerances, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_42setTolerances}, {"getTolerances", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_45getTolerances, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_44getTolerances}, {"setConvergenceTest", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_47setConvergenceTest, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_46setConvergenceTest}, {"getConvergenceTest", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_49getConvergenceTest, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_48getConvergenceTest}, {"callConvergenceTest", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_51callConvergenceTest, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_50callConvergenceTest}, {"setConvergenceHistory", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_53setConvergenceHistory, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_52setConvergenceHistory}, {"getConvergenceHistory", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_55getConvergenceHistory, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_54getConvergenceHistory}, {"logConvergenceHistory", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_57logConvergenceHistory, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_56logConvergenceHistory}, {"setMonitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_59setMonitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_58setMonitor}, {"getMonitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_61getMonitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_60getMonitor}, {"cancelMonitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_63cancelMonitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_62cancelMonitor}, {"monitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_65monitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_64monitor}, {"setPCSide", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_67setPCSide, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_66setPCSide}, {"getPCSide", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_69getPCSide, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_68getPCSide}, {"setNormType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_71setNormType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_70setNormType}, {"getNormType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_73getNormType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_72getNormType}, {"setComputeEigenvalues", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_75setComputeEigenvalues, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_74setComputeEigenvalues}, {"getComputeEigenvalues", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_77getComputeEigenvalues, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_76getComputeEigenvalues}, {"setComputeSingularValues", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_79setComputeSingularValues, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_78setComputeSingularValues}, {"getComputeSingularValues", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_81getComputeSingularValues, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_80getComputeSingularValues}, {"setInitialGuessNonzero", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_83setInitialGuessNonzero, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_82setInitialGuessNonzero}, {"getInitialGuessNonzero", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_85getInitialGuessNonzero, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_84getInitialGuessNonzero}, {"setInitialGuessKnoll", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_87setInitialGuessKnoll, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_86setInitialGuessKnoll}, {"getInitialGuessKnoll", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_89getInitialGuessKnoll, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_88getInitialGuessKnoll}, {"setUseFischerGuess", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_91setUseFischerGuess, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_90setUseFischerGuess}, {"setUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_93setUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_92setUp}, {"reset", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_95reset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_94reset}, {"setUpOnBlocks", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_97setUpOnBlocks, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_96setUpOnBlocks}, {"solve", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_99solve, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_98solve}, {"solveTranspose", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_101solveTranspose, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_100solveTranspose}, {"setIterationNumber", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_103setIterationNumber, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_102setIterationNumber}, {"getIterationNumber", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_105getIterationNumber, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_104getIterationNumber}, {"setResidualNorm", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_107setResidualNorm, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_106setResidualNorm}, {"getResidualNorm", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_109getResidualNorm, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_108getResidualNorm}, {"setConvergedReason", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_111setConvergedReason, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_110setConvergedReason}, {"getConvergedReason", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_113getConvergedReason, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_112getConvergedReason}, {"getRhs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_115getRhs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_114getRhs}, {"getSolution", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_117getSolution, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_116getSolution}, {"getWorkVecs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_119getWorkVecs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_118getWorkVecs}, {"buildSolution", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_121buildSolution, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_120buildSolution}, {"buildResidual", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_123buildResidual, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_122buildResidual}, {"computeEigenvalues", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_125computeEigenvalues, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_124computeEigenvalues}, {"computeExtremeSingularValues", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_127computeExtremeSingularValues, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_126computeExtremeSingularValues}, {"setGMRESRestart", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_129setGMRESRestart, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_128setGMRESRestart}, {"createPython", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_131createPython, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_130createPython}, {"setPythonContext", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_133setPythonContext, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_132setPythonContext}, {"getPythonContext", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_135getPythonContext, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_134getPythonContext}, {"setPythonType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3KSP_137setPythonType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3KSP_136setPythonType}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_KSP[] = { {(char *)"appctx", __pyx_getprop_8petsc4py_5PETSc_3KSP_appctx, __pyx_setprop_8petsc4py_5PETSc_3KSP_appctx, (char *)0, 0}, {(char *)"dm", __pyx_getprop_8petsc4py_5PETSc_3KSP_dm, __pyx_setprop_8petsc4py_5PETSc_3KSP_dm, (char *)0, 0}, {(char *)"vec_sol", __pyx_getprop_8petsc4py_5PETSc_3KSP_vec_sol, 0, (char *)0, 0}, {(char *)"vec_rhs", __pyx_getprop_8petsc4py_5PETSc_3KSP_vec_rhs, 0, (char *)0, 0}, {(char *)"mat_op", __pyx_getprop_8petsc4py_5PETSc_3KSP_mat_op, 0, (char *)0, 0}, {(char *)"mat_pc", __pyx_getprop_8petsc4py_5PETSc_3KSP_mat_pc, 0, (char *)0, 0}, {(char *)"guess_nonzero", __pyx_getprop_8petsc4py_5PETSc_3KSP_guess_nonzero, __pyx_setprop_8petsc4py_5PETSc_3KSP_guess_nonzero, (char *)0, 0}, {(char *)"guess_knoll", __pyx_getprop_8petsc4py_5PETSc_3KSP_guess_knoll, __pyx_setprop_8petsc4py_5PETSc_3KSP_guess_knoll, (char *)0, 0}, {(char *)"pc", __pyx_getprop_8petsc4py_5PETSc_3KSP_pc, 0, (char *)0, 0}, {(char *)"pc_side", __pyx_getprop_8petsc4py_5PETSc_3KSP_pc_side, __pyx_setprop_8petsc4py_5PETSc_3KSP_pc_side, (char *)0, 0}, {(char *)"norm_type", __pyx_getprop_8petsc4py_5PETSc_3KSP_norm_type, __pyx_setprop_8petsc4py_5PETSc_3KSP_norm_type, (char *)0, 0}, {(char *)"rtol", __pyx_getprop_8petsc4py_5PETSc_3KSP_rtol, __pyx_setprop_8petsc4py_5PETSc_3KSP_rtol, (char *)0, 0}, {(char *)"atol", __pyx_getprop_8petsc4py_5PETSc_3KSP_atol, __pyx_setprop_8petsc4py_5PETSc_3KSP_atol, (char *)0, 0}, {(char *)"divtol", __pyx_getprop_8petsc4py_5PETSc_3KSP_divtol, __pyx_setprop_8petsc4py_5PETSc_3KSP_divtol, (char *)0, 0}, {(char *)"max_it", __pyx_getprop_8petsc4py_5PETSc_3KSP_max_it, __pyx_setprop_8petsc4py_5PETSc_3KSP_max_it, (char *)0, 0}, {(char *)"its", __pyx_getprop_8petsc4py_5PETSc_3KSP_its, __pyx_setprop_8petsc4py_5PETSc_3KSP_its, (char *)0, 0}, {(char *)"norm", __pyx_getprop_8petsc4py_5PETSc_3KSP_norm, __pyx_setprop_8petsc4py_5PETSc_3KSP_norm, (char *)0, 0}, {(char *)"history", __pyx_getprop_8petsc4py_5PETSc_3KSP_history, 0, (char *)0, 0}, {(char *)"reason", __pyx_getprop_8petsc4py_5PETSc_3KSP_reason, __pyx_setprop_8petsc4py_5PETSc_3KSP_reason, (char *)0, 0}, {(char *)"iterating", __pyx_getprop_8petsc4py_5PETSc_3KSP_iterating, 0, (char *)0, 0}, {(char *)"converged", __pyx_getprop_8petsc4py_5PETSc_3KSP_converged, 0, (char *)0, 0}, {(char *)"diverged", __pyx_getprop_8petsc4py_5PETSc_3KSP_diverged, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscKSP_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.KSP", /*tp_name*/ sizeof(struct PyPetscKSPObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ __pyx_pw_8petsc4py_5PETSc_3KSP_3__call__, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_KSP, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_KSP, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_KSP, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_SNES __pyx_vtable_8petsc4py_5PETSc_SNES; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_SNES(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscSNESObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscSNESObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_SNES; if (unlikely(__pyx_pw_8petsc4py_5PETSc_4SNES_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_appctx(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_6appctx_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_appctx(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_6appctx_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_dm(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_2dm_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_dm(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_2dm_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_npc(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_3npc_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_npc(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_3npc_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_vec_sol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_7vec_sol_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_vec_upd(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_7vec_upd_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_vec_rhs(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_7vec_rhs_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_ksp(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_3ksp_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_ksp(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_3ksp_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_use_ew(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_6use_ew_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_use_ew(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_6use_ew_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_rtol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_4rtol_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_rtol(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_4rtol_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_atol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_4atol_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_atol(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_4atol_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_stol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_4stol_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_stol(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_4stol_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_max_it(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_6max_it_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_max_it(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_6max_it_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_max_funcs(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_9max_funcs_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_max_funcs(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_9max_funcs_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_its(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_3its_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_its(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_3its_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_history(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_7history_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_reason(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_6reason_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_reason(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_6reason_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_iterating(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_9iterating_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_converged(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_9converged_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_diverged(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_8diverged_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_use_mf(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_6use_mf_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_use_mf(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_6use_mf_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4SNES_use_fd(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4SNES_6use_fd_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_4SNES_use_fd(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_4SNES_6use_fd_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_SNES[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_3view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_2view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_5destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_4destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_7create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_6create}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_9setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_8setType}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_11getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_10getType}, {"setOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_13setOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_12setOptionsPrefix}, {"getOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_15getOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_14getOptionsPrefix}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_17setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_16setFromOptions}, {"setAppCtx", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_19setAppCtx, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_18setAppCtx}, {"getAppCtx", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_21getAppCtx, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_20getAppCtx}, {"getDM", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_23getDM, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_22getDM}, {"setDM", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_25setDM, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_24setDM}, {"setFASInterpolation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_27setFASInterpolation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_26setFASInterpolation}, {"getFASInterpolation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_29getFASInterpolation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_28getFASInterpolation}, {"setFASRestriction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_31setFASRestriction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_30setFASRestriction}, {"getFASRestriction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_33getFASRestriction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_32getFASRestriction}, {"setFASInjection", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_35setFASInjection, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_34setFASInjection}, {"getFASInjection", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_37getFASInjection, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_36getFASInjection}, {"setFASRScale", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_39setFASRScale, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_38setFASRScale}, {"setFASLevels", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_41setFASLevels, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_40setFASLevels}, {"getFASLevels", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_43getFASLevels, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_42getFASLevels}, {"getFASCycleSNES", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_45getFASCycleSNES, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_44getFASCycleSNES}, {"getFASCoarseSolve", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_47getFASCoarseSolve, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_46getFASCoarseSolve}, {"getFASSmoother", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_49getFASSmoother, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_48getFASSmoother}, {"getFASSmootherDown", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_51getFASSmootherDown, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_50getFASSmootherDown}, {"getFASSmootherUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_53getFASSmootherUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_52getFASSmootherUp}, {"getNPC", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_55getNPC, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_54getNPC}, {"hasNPC", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_57hasNPC, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_56hasNPC}, {"setNPC", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_59setNPC, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_58setNPC}, {"setInitialGuess", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_61setInitialGuess, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_60setInitialGuess}, {"getInitialGuess", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_63getInitialGuess, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_62getInitialGuess}, {"setFunction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_65setFunction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_64setFunction}, {"getFunction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_67getFunction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_66getFunction}, {"setUpdate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_69setUpdate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_68setUpdate}, {"getUpdate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_71getUpdate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_70getUpdate}, {"setJacobian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_73setJacobian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_72setJacobian}, {"getJacobian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_75getJacobian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_74getJacobian}, {"setObjective", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_77setObjective, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_76setObjective}, {"getObjective", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_79getObjective, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_78getObjective}, {"computeFunction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_81computeFunction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_80computeFunction}, {"computeJacobian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_83computeJacobian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_82computeJacobian}, {"computeObjective", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_85computeObjective, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_84computeObjective}, {"setTolerances", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_87setTolerances, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_86setTolerances}, {"getTolerances", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_89getTolerances, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_88getTolerances}, {"setNormSchedule", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_91setNormSchedule, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_90setNormSchedule}, {"getNormSchedule", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_93getNormSchedule, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_92getNormSchedule}, {"setConvergenceTest", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_95setConvergenceTest, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_94setConvergenceTest}, {"getConvergenceTest", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_97getConvergenceTest, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_96getConvergenceTest}, {"callConvergenceTest", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_99callConvergenceTest, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_98callConvergenceTest}, {"setConvergenceHistory", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_101setConvergenceHistory, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_100setConvergenceHistory}, {"getConvergenceHistory", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_103getConvergenceHistory, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_102getConvergenceHistory}, {"logConvergenceHistory", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_105logConvergenceHistory, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_104logConvergenceHistory}, {"setResetCounters", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_107setResetCounters, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_106setResetCounters}, {"setMonitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_109setMonitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_108setMonitor}, {"getMonitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_111getMonitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_110getMonitor}, {"cancelMonitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_113cancelMonitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_112cancelMonitor}, {"monitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_115monitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_114monitor}, {"setMaxFunctionEvaluations", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_117setMaxFunctionEvaluations, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_116setMaxFunctionEvaluations}, {"getMaxFunctionEvaluations", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_119getMaxFunctionEvaluations, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_118getMaxFunctionEvaluations}, {"getFunctionEvaluations", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_121getFunctionEvaluations, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_120getFunctionEvaluations}, {"setMaxStepFailures", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_123setMaxStepFailures, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_122setMaxStepFailures}, {"getMaxStepFailures", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_125getMaxStepFailures, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_124getMaxStepFailures}, {"getStepFailures", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_127getStepFailures, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_126getStepFailures}, {"setMaxKSPFailures", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_129setMaxKSPFailures, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_128setMaxKSPFailures}, {"getMaxKSPFailures", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_131getMaxKSPFailures, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_130getMaxKSPFailures}, {"getKSPFailures", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_133getKSPFailures, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_132getKSPFailures}, {"setUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_135setUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_134setUp}, {"reset", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_137reset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_136reset}, {"solve", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_139solve, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_138solve}, {"setConvergedReason", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_141setConvergedReason, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_140setConvergedReason}, {"getConvergedReason", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_143getConvergedReason, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_142getConvergedReason}, {"setIterationNumber", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_145setIterationNumber, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_144setIterationNumber}, {"getIterationNumber", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_147getIterationNumber, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_146getIterationNumber}, {"getLinearSolveIterations", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_149getLinearSolveIterations, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_148getLinearSolveIterations}, {"getRhs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_151getRhs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_150getRhs}, {"getSolution", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_153getSolution, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_152getSolution}, {"setSolution", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_155setSolution, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_154setSolution}, {"getSolutionUpdate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_157getSolutionUpdate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_156getSolutionUpdate}, {"setKSP", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_159setKSP, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_158setKSP}, {"getKSP", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_161getKSP, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_160getKSP}, {"setUseEW", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_163setUseEW, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_162setUseEW}, {"getUseEW", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_165getUseEW, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_164getUseEW}, {"setParamsEW", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_167setParamsEW, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_166setParamsEW}, {"getParamsEW", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_169getParamsEW, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_168getParamsEW}, {"setUseMF", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_171setUseMF, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_170setUseMF}, {"getUseMF", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_173getUseMF, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_172getUseMF}, {"setUseFD", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_175setUseFD, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_174setUseFD}, {"getUseFD", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_177getUseFD, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_176getUseFD}, {"setVariableBounds", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_179setVariableBounds, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_178setVariableBounds}, {"getVIInactiveSet", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_181getVIInactiveSet, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_180getVIInactiveSet}, {"createPython", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_183createPython, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_182createPython}, {"setPythonContext", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_185setPythonContext, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_184setPythonContext}, {"getPythonContext", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_187getPythonContext, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_186getPythonContext}, {"setPythonType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_189setPythonType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_188setPythonType}, {"getCompositeSNES", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_191getCompositeSNES, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_190getCompositeSNES}, {"getCompositeNumber", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4SNES_193getCompositeNumber, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4SNES_192getCompositeNumber}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_SNES[] = { {(char *)"appctx", __pyx_getprop_8petsc4py_5PETSc_4SNES_appctx, __pyx_setprop_8petsc4py_5PETSc_4SNES_appctx, (char *)0, 0}, {(char *)"dm", __pyx_getprop_8petsc4py_5PETSc_4SNES_dm, __pyx_setprop_8petsc4py_5PETSc_4SNES_dm, (char *)0, 0}, {(char *)"npc", __pyx_getprop_8petsc4py_5PETSc_4SNES_npc, __pyx_setprop_8petsc4py_5PETSc_4SNES_npc, (char *)0, 0}, {(char *)"vec_sol", __pyx_getprop_8petsc4py_5PETSc_4SNES_vec_sol, 0, (char *)0, 0}, {(char *)"vec_upd", __pyx_getprop_8petsc4py_5PETSc_4SNES_vec_upd, 0, (char *)0, 0}, {(char *)"vec_rhs", __pyx_getprop_8petsc4py_5PETSc_4SNES_vec_rhs, 0, (char *)0, 0}, {(char *)"ksp", __pyx_getprop_8petsc4py_5PETSc_4SNES_ksp, __pyx_setprop_8petsc4py_5PETSc_4SNES_ksp, (char *)0, 0}, {(char *)"use_ew", __pyx_getprop_8petsc4py_5PETSc_4SNES_use_ew, __pyx_setprop_8petsc4py_5PETSc_4SNES_use_ew, (char *)0, 0}, {(char *)"rtol", __pyx_getprop_8petsc4py_5PETSc_4SNES_rtol, __pyx_setprop_8petsc4py_5PETSc_4SNES_rtol, (char *)0, 0}, {(char *)"atol", __pyx_getprop_8petsc4py_5PETSc_4SNES_atol, __pyx_setprop_8petsc4py_5PETSc_4SNES_atol, (char *)0, 0}, {(char *)"stol", __pyx_getprop_8petsc4py_5PETSc_4SNES_stol, __pyx_setprop_8petsc4py_5PETSc_4SNES_stol, (char *)0, 0}, {(char *)"max_it", __pyx_getprop_8petsc4py_5PETSc_4SNES_max_it, __pyx_setprop_8petsc4py_5PETSc_4SNES_max_it, (char *)0, 0}, {(char *)"max_funcs", __pyx_getprop_8petsc4py_5PETSc_4SNES_max_funcs, __pyx_setprop_8petsc4py_5PETSc_4SNES_max_funcs, (char *)0, 0}, {(char *)"its", __pyx_getprop_8petsc4py_5PETSc_4SNES_its, __pyx_setprop_8petsc4py_5PETSc_4SNES_its, (char *)0, 0}, {(char *)"history", __pyx_getprop_8petsc4py_5PETSc_4SNES_history, 0, (char *)0, 0}, {(char *)"reason", __pyx_getprop_8petsc4py_5PETSc_4SNES_reason, __pyx_setprop_8petsc4py_5PETSc_4SNES_reason, (char *)0, 0}, {(char *)"iterating", __pyx_getprop_8petsc4py_5PETSc_4SNES_iterating, 0, (char *)0, 0}, {(char *)"converged", __pyx_getprop_8petsc4py_5PETSc_4SNES_converged, 0, (char *)0, 0}, {(char *)"diverged", __pyx_getprop_8petsc4py_5PETSc_4SNES_diverged, 0, (char *)0, 0}, {(char *)"use_mf", __pyx_getprop_8petsc4py_5PETSc_4SNES_use_mf, __pyx_setprop_8petsc4py_5PETSc_4SNES_use_mf, (char *)0, 0}, {(char *)"use_fd", __pyx_getprop_8petsc4py_5PETSc_4SNES_use_fd, __pyx_setprop_8petsc4py_5PETSc_4SNES_use_fd, (char *)0, 0}, {0, 0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscSNES_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.SNES", /*tp_name*/ sizeof(struct PyPetscSNESObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_SNES, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_SNES, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_SNES, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_TS __pyx_vtable_8petsc4py_5PETSc_TS; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_TS(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscTSObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscTSObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_TS; if (unlikely(__pyx_pw_8petsc4py_5PETSc_2TS_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_appctx(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_6appctx_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_2TS_appctx(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_2TS_6appctx_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_dm(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_2dm_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_2TS_dm(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_2TS_2dm_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_problem_type(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_12problem_type_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_2TS_problem_type(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_2TS_12problem_type_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_equation_type(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_13equation_type_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_2TS_equation_type(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_2TS_13equation_type_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_snes(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_4snes_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_ksp(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_3ksp_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_vec_sol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_7vec_sol_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_time(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_4time_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_2TS_time(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_2TS_4time_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_time_step(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_9time_step_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_2TS_time_step(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_2TS_9time_step_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_step_number(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_11step_number_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_2TS_step_number(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_2TS_11step_number_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_max_time(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_8max_time_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_2TS_max_time(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_2TS_8max_time_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_max_steps(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_9max_steps_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_2TS_max_steps(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_2TS_9max_steps_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_rtol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_4rtol_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_2TS_rtol(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_2TS_4rtol_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_atol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_4atol_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_2TS_atol(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_2TS_4atol_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_reason(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_6reason_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_2TS_reason(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_2TS_6reason_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_iterating(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_9iterating_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_converged(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_9converged_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_2TS_diverged(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_2TS_8diverged_1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_TS[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_3view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_2view}, {"load", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_5load, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_4load}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_7destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_6destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_9create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_8create}, {"clone", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_11clone, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_10clone}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_13setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_12setType}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_15getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_14getType}, {"setProblemType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_17setProblemType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_16setProblemType}, {"getProblemType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_19getProblemType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_18getProblemType}, {"setEquationType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_21setEquationType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_20setEquationType}, {"getEquationType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_23getEquationType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_22getEquationType}, {"setOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_25setOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_24setOptionsPrefix}, {"getOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_27getOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_26getOptionsPrefix}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_29setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_28setFromOptions}, {"setAppCtx", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_31setAppCtx, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_30setAppCtx}, {"getAppCtx", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_33getAppCtx, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_32getAppCtx}, {"setRHSFunction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_35setRHSFunction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_34setRHSFunction}, {"setRHSJacobian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_37setRHSJacobian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_36setRHSJacobian}, {"computeRHSFunction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_39computeRHSFunction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_38computeRHSFunction}, {"computeRHSFunctionLinear", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_41computeRHSFunctionLinear, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_40computeRHSFunctionLinear}, {"computeRHSJacobian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_43computeRHSJacobian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_42computeRHSJacobian}, {"computeRHSJacobianConstant", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_45computeRHSJacobianConstant, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_44computeRHSJacobianConstant}, {"getRHSFunction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_47getRHSFunction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_46getRHSFunction}, {"getRHSJacobian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_49getRHSJacobian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_48getRHSJacobian}, {"setIFunction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_51setIFunction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_50setIFunction}, {"setIJacobian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_53setIJacobian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_52setIJacobian}, {"computeIFunction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_55computeIFunction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_54computeIFunction}, {"computeIJacobian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_57computeIJacobian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_56computeIJacobian}, {"getIFunction", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_59getIFunction, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_58getIFunction}, {"getIJacobian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_61getIJacobian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_60getIJacobian}, {"setSolution", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_63setSolution, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_62setSolution}, {"getSolution", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_65getSolution, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_64getSolution}, {"getSNES", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_67getSNES, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_66getSNES}, {"getKSP", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_69getKSP, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_68getKSP}, {"getDM", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_71getDM, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_70getDM}, {"setDM", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_73setDM, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_72setDM}, {"setTime", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_75setTime, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_74setTime}, {"getTime", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_77getTime, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_76getTime}, {"getPrevTime", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_79getPrevTime, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_78getPrevTime}, {"getSolveTime", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_81getSolveTime, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_80getSolveTime}, {"setInitialTimeStep", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_83setInitialTimeStep, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_82setInitialTimeStep}, {"setTimeStep", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_85setTimeStep, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_84setTimeStep}, {"getTimeStep", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_87getTimeStep, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_86getTimeStep}, {"setStepNumber", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_89setStepNumber, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_88setStepNumber}, {"getStepNumber", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_91getStepNumber, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_90getStepNumber}, {"setMaxTime", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_93setMaxTime, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_92setMaxTime}, {"getMaxTime", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_95getMaxTime, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_94getMaxTime}, {"setMaxSteps", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_97setMaxSteps, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_96setMaxSteps}, {"getMaxSteps", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_99getMaxSteps, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_98getMaxSteps}, {"setDuration", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_101setDuration, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_100setDuration}, {"getDuration", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_103getDuration, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_102getDuration}, {"getTotalSteps", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_105getTotalSteps, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_104getTotalSteps}, {"getSNESIterations", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_107getSNESIterations, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_106getSNESIterations}, {"getKSPIterations", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_109getKSPIterations, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_108getKSPIterations}, {"setMaxStepRejections", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_111setMaxStepRejections, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_110setMaxStepRejections}, {"getStepRejections", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_113getStepRejections, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_112getStepRejections}, {"setMaxSNESFailures", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_115setMaxSNESFailures, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_114setMaxSNESFailures}, {"getSNESFailures", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_117getSNESFailures, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_116getSNESFailures}, {"setErrorIfStepFails", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_119setErrorIfStepFails, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_118setErrorIfStepFails}, {"setTolerances", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_121setTolerances, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_120setTolerances}, {"getTolerances", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_123getTolerances, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_122getTolerances}, {"setExactFinalTime", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_125setExactFinalTime, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_124setExactFinalTime}, {"setConvergedReason", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_127setConvergedReason, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_126setConvergedReason}, {"getConvergedReason", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_129getConvergedReason, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_128getConvergedReason}, {"setMonitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_131setMonitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_130setMonitor}, {"getMonitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_133getMonitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_132getMonitor}, {"cancelMonitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_135cancelMonitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_134cancelMonitor}, {"monitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_137monitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_136monitor}, {"setPreStep", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_139setPreStep, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_138setPreStep}, {"getPreStep", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_141getPreStep, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_140getPreStep}, {"setPostStep", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_143setPostStep, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_142setPostStep}, {"getPostStep", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_145getPostStep, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_144getPostStep}, {"setUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_147setUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_146setUp}, {"reset", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_149reset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_148reset}, {"step", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_151step, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_150step}, {"rollBack", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_153rollBack, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_152rollBack}, {"solve", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_155solve, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_154solve}, {"interpolate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_157interpolate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_156interpolate}, {"createPython", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_159createPython, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_158createPython}, {"setPythonContext", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_161setPythonContext, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_160setPythonContext}, {"getPythonContext", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_163getPythonContext, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_162getPythonContext}, {"setPythonType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_165setPythonType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_164setPythonType}, {"setTheta", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_167setTheta, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_166setTheta}, {"getTheta", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_169getTheta, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_168getTheta}, {"setThetaEndpoint", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_171setThetaEndpoint, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_170setThetaEndpoint}, {"getThetaEndpoint", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_173getThetaEndpoint, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_172getThetaEndpoint}, {"setAlphaRadius", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_175setAlphaRadius, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_174setAlphaRadius}, {"setAlphaParams", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_177setAlphaParams, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_176setAlphaParams}, {"getAlphaParams", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2TS_179getAlphaParams, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2TS_178getAlphaParams}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_TS[] = { {(char *)"appctx", __pyx_getprop_8petsc4py_5PETSc_2TS_appctx, __pyx_setprop_8petsc4py_5PETSc_2TS_appctx, (char *)0, 0}, {(char *)"dm", __pyx_getprop_8petsc4py_5PETSc_2TS_dm, __pyx_setprop_8petsc4py_5PETSc_2TS_dm, (char *)0, 0}, {(char *)"problem_type", __pyx_getprop_8petsc4py_5PETSc_2TS_problem_type, __pyx_setprop_8petsc4py_5PETSc_2TS_problem_type, (char *)0, 0}, {(char *)"equation_type", __pyx_getprop_8petsc4py_5PETSc_2TS_equation_type, __pyx_setprop_8petsc4py_5PETSc_2TS_equation_type, (char *)0, 0}, {(char *)"snes", __pyx_getprop_8petsc4py_5PETSc_2TS_snes, 0, (char *)0, 0}, {(char *)"ksp", __pyx_getprop_8petsc4py_5PETSc_2TS_ksp, 0, (char *)0, 0}, {(char *)"vec_sol", __pyx_getprop_8petsc4py_5PETSc_2TS_vec_sol, 0, (char *)0, 0}, {(char *)"time", __pyx_getprop_8petsc4py_5PETSc_2TS_time, __pyx_setprop_8petsc4py_5PETSc_2TS_time, (char *)0, 0}, {(char *)"time_step", __pyx_getprop_8petsc4py_5PETSc_2TS_time_step, __pyx_setprop_8petsc4py_5PETSc_2TS_time_step, (char *)0, 0}, {(char *)"step_number", __pyx_getprop_8petsc4py_5PETSc_2TS_step_number, __pyx_setprop_8petsc4py_5PETSc_2TS_step_number, (char *)0, 0}, {(char *)"max_time", __pyx_getprop_8petsc4py_5PETSc_2TS_max_time, __pyx_setprop_8petsc4py_5PETSc_2TS_max_time, (char *)0, 0}, {(char *)"max_steps", __pyx_getprop_8petsc4py_5PETSc_2TS_max_steps, __pyx_setprop_8petsc4py_5PETSc_2TS_max_steps, (char *)0, 0}, {(char *)"rtol", __pyx_getprop_8petsc4py_5PETSc_2TS_rtol, __pyx_setprop_8petsc4py_5PETSc_2TS_rtol, (char *)0, 0}, {(char *)"atol", __pyx_getprop_8petsc4py_5PETSc_2TS_atol, __pyx_setprop_8petsc4py_5PETSc_2TS_atol, (char *)0, 0}, {(char *)"reason", __pyx_getprop_8petsc4py_5PETSc_2TS_reason, __pyx_setprop_8petsc4py_5PETSc_2TS_reason, (char *)0, 0}, {(char *)"iterating", __pyx_getprop_8petsc4py_5PETSc_2TS_iterating, 0, (char *)0, 0}, {(char *)"converged", __pyx_getprop_8petsc4py_5PETSc_2TS_converged, 0, (char *)0, 0}, {(char *)"diverged", __pyx_getprop_8petsc4py_5PETSc_2TS_diverged, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscTS_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.TS", /*tp_name*/ sizeof(struct PyPetscTSObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_TS, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_TS, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_TS, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_TAO __pyx_vtable_8petsc4py_5PETSc_TAO; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_TAO(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscTAOObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscTAOObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_TAO; if (unlikely(__pyx_pw_8petsc4py_5PETSc_3TAO_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_appctx(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_6appctx_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3TAO_appctx(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3TAO_6appctx_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_ksp(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_3ksp_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_ftol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_4ftol_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3TAO_ftol(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3TAO_4ftol_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_gtol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_4gtol_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3TAO_gtol(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3TAO_4gtol_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_ctol(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_4ctol_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_3TAO_ctol(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_3TAO_4ctol_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_its(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_3its_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_gnorm(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_5gnorm_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_cnorm(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_5cnorm_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_solution(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_8solution_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_objective(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_9objective_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_function(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_8function_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_gradient(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_8gradient_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_reason(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_6reason_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_iterating(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_9iterating_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_converged(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_9converged_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_3TAO_diverged(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_3TAO_8diverged_1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_TAO[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_3view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_2view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_5destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_4destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_7create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_6create}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_9setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_8setType}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_11getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_10getType}, {"setOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_13setOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_12setOptionsPrefix}, {"getOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_15getOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_14getOptionsPrefix}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_17setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_16setFromOptions}, {"setUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_19setUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_18setUp}, {"setInitialTrustRegionRadius", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_21setInitialTrustRegionRadius, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_20setInitialTrustRegionRadius}, {"setAppCtx", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_23setAppCtx, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_22setAppCtx}, {"getAppCtx", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_25getAppCtx, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_24getAppCtx}, {"setInitial", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_27setInitial, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_26setInitial}, {"setObjective", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_29setObjective, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_28setObjective}, {"setSeparableObjective", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_31setSeparableObjective, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_30setSeparableObjective}, {"setGradient", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_33setGradient, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_32setGradient}, {"setObjectiveGradient", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_35setObjectiveGradient, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_34setObjectiveGradient}, {"setVariableBounds", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_37setVariableBounds, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_36setVariableBounds}, {"setConstraints", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_39setConstraints, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_38setConstraints}, {"setHessian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_41setHessian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_40setHessian}, {"setJacobian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_43setJacobian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_42setJacobian}, {"setStateDesignIS", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_45setStateDesignIS, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_44setStateDesignIS}, {"setJacobianState", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_47setJacobianState, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_46setJacobianState}, {"setJacobianDesign", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_49setJacobianDesign, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_48setJacobianDesign}, {"computeObjective", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_51computeObjective, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_50computeObjective}, {"computeSeparableObjective", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_53computeSeparableObjective, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_52computeSeparableObjective}, {"computeGradient", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_55computeGradient, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_54computeGradient}, {"computeObjectiveGradient", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_57computeObjectiveGradient, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_56computeObjectiveGradient}, {"computeDualVariables", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_59computeDualVariables, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_58computeDualVariables}, {"computeVariableBounds", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_61computeVariableBounds, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_60computeVariableBounds}, {"computeConstraints", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_63computeConstraints, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_62computeConstraints}, {"computeHessian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_65computeHessian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_64computeHessian}, {"computeJacobian", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_67computeJacobian, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_66computeJacobian}, {"setTolerances", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_69setTolerances, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_68setTolerances}, {"getTolerances", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_71getTolerances, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_70getTolerances}, {"setConstraintTolerances", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_73setConstraintTolerances, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_72setConstraintTolerances}, {"getConstraintTolerances", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_75getConstraintTolerances, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_74getConstraintTolerances}, {"setConvergenceTest", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_77setConvergenceTest, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_76setConvergenceTest}, {"getConvergenceTest", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_79getConvergenceTest, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_78getConvergenceTest}, {"setConvergedReason", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_81setConvergedReason, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_80setConvergedReason}, {"getConvergedReason", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_83getConvergedReason, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_82getConvergedReason}, {"setMonitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_85setMonitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_84setMonitor}, {"getMonitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_87getMonitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_86getMonitor}, {"cancelMonitor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_89cancelMonitor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_88cancelMonitor}, {"solve", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_91solve, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_90solve}, {"getSolution", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_93getSolution, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_92getSolution}, {"getGradient", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_95getGradient, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_94getGradient}, {"setGradientNorm", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_97setGradientNorm, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_96setGradientNorm}, {"getGradientNorm", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_99getGradientNorm, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_98getGradientNorm}, {"setLMVMH0", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_101setLMVMH0, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_100setLMVMH0}, {"getLMVMH0", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_103getLMVMH0, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_102getLMVMH0}, {"getLMVMH0KSP", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_105getLMVMH0KSP, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_104getLMVMH0KSP}, {"getVariableBounds", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_107getVariableBounds, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_106getVariableBounds}, {"getIterationNumber", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_109getIterationNumber, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_108getIterationNumber}, {"getObjectiveValue", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_111getObjectiveValue, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_110getObjectiveValue}, {"getConvergedReason", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_113getConvergedReason, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_112getConvergedReason}, {"getSolutionNorm", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_115getSolutionNorm, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_114getSolutionNorm}, {"getSolutionStatus", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_117getSolutionStatus, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_116getSolutionStatus}, {"getKSP", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3TAO_119getKSP, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3TAO_118getKSP}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_TAO[] = { {(char *)"appctx", __pyx_getprop_8petsc4py_5PETSc_3TAO_appctx, __pyx_setprop_8petsc4py_5PETSc_3TAO_appctx, (char *)0, 0}, {(char *)"ksp", __pyx_getprop_8petsc4py_5PETSc_3TAO_ksp, 0, (char *)0, 0}, {(char *)"ftol", __pyx_getprop_8petsc4py_5PETSc_3TAO_ftol, __pyx_setprop_8petsc4py_5PETSc_3TAO_ftol, (char *)0, 0}, {(char *)"gtol", __pyx_getprop_8petsc4py_5PETSc_3TAO_gtol, __pyx_setprop_8petsc4py_5PETSc_3TAO_gtol, (char *)0, 0}, {(char *)"ctol", __pyx_getprop_8petsc4py_5PETSc_3TAO_ctol, __pyx_setprop_8petsc4py_5PETSc_3TAO_ctol, (char *)0, 0}, {(char *)"its", __pyx_getprop_8petsc4py_5PETSc_3TAO_its, 0, (char *)0, 0}, {(char *)"gnorm", __pyx_getprop_8petsc4py_5PETSc_3TAO_gnorm, 0, (char *)0, 0}, {(char *)"cnorm", __pyx_getprop_8petsc4py_5PETSc_3TAO_cnorm, 0, (char *)0, 0}, {(char *)"solution", __pyx_getprop_8petsc4py_5PETSc_3TAO_solution, 0, (char *)0, 0}, {(char *)"objective", __pyx_getprop_8petsc4py_5PETSc_3TAO_objective, 0, (char *)0, 0}, {(char *)"function", __pyx_getprop_8petsc4py_5PETSc_3TAO_function, 0, (char *)0, 0}, {(char *)"gradient", __pyx_getprop_8petsc4py_5PETSc_3TAO_gradient, 0, (char *)0, 0}, {(char *)"reason", __pyx_getprop_8petsc4py_5PETSc_3TAO_reason, 0, (char *)0, 0}, {(char *)"iterating", __pyx_getprop_8petsc4py_5PETSc_3TAO_iterating, 0, (char *)0, 0}, {(char *)"converged", __pyx_getprop_8petsc4py_5PETSc_3TAO_converged, 0, (char *)0, 0}, {(char *)"diverged", __pyx_getprop_8petsc4py_5PETSc_3TAO_diverged, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscTAO_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.TAO", /*tp_name*/ sizeof(struct PyPetscTAOObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ "\n TAO Solver\n ", /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_TAO, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_TAO, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_TAO, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_AO __pyx_vtable_8petsc4py_5PETSc_AO; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_AO(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscAOObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscAOObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_AO; if (unlikely(__pyx_pw_8petsc4py_5PETSc_2AO_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_AO[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2AO_3view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2AO_2view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2AO_5destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2AO_4destroy}, {"createBasic", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2AO_7createBasic, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2AO_6createBasic}, {"createMemoryScalable", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2AO_9createMemoryScalable, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2AO_8createMemoryScalable}, {"createMapping", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2AO_11createMapping, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2AO_10createMapping}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2AO_13getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2AO_12getType}, {"app2petsc", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2AO_15app2petsc, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2AO_14app2petsc}, {"petsc2app", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2AO_17petsc2app, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2AO_16petsc2app}, {0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscAO_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.AO", /*tp_name*/ sizeof(struct PyPetscAOObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_AO, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_AO, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_DM __pyx_vtable_8petsc4py_5PETSc_DM; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_DM(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscDMObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscDMObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_DM; if (unlikely(__pyx_pw_8petsc4py_5PETSc_2DM_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_DM[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_3view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_2view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_5destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_4destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_7create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_6create}, {"clone", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_9clone, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_8clone}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_11setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_10setType}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_13getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_12getType}, {"getDimension", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_15getDimension, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_14getDimension}, {"setDimension", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_17setDimension, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_16setDimension}, {"setOptionsPrefix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_19setOptionsPrefix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_18setOptionsPrefix}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_21setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_20setFromOptions}, {"setUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_23setUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_22setUp}, {"setAppCtx", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_25setAppCtx, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_24setAppCtx}, {"getAppCtx", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_27getAppCtx, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_26getAppCtx}, {"getBlockSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_29getBlockSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_28getBlockSize}, {"setVecType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_31setVecType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_30setVecType}, {"createGlobalVec", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_33createGlobalVec, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_32createGlobalVec}, {"createLocalVec", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_35createLocalVec, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_34createLocalVec}, {"globalToLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_37globalToLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_36globalToLocal}, {"localToGlobal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_39localToGlobal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_38localToGlobal}, {"localToLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_41localToLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_40localToLocal}, {"getLGMap", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_43getLGMap, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_42getLGMap}, {"getCoordinateDM", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_45getCoordinateDM, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_44getCoordinateDM}, {"getCoordinateSection", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_47getCoordinateSection, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_46getCoordinateSection}, {"setCoordinates", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_49setCoordinates, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_48setCoordinates}, {"getCoordinates", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_51getCoordinates, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_50getCoordinates}, {"setCoordinatesLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_53setCoordinatesLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_52setCoordinatesLocal}, {"getCoordinatesLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_55getCoordinatesLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_54getCoordinatesLocal}, {"setMatType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_57setMatType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_56setMatType}, {"createMat", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_59createMat, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_58createMat}, {"createInterpolation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_61createInterpolation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_60createInterpolation}, {"createInjection", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_63createInjection, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_62createInjection}, {"createAggregates", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_65createAggregates, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_64createAggregates}, {"convert", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_67convert, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_66convert}, {"refine", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_69refine, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_68refine}, {"coarsen", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_71coarsen, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_70coarsen}, {"refineHierarchy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_73refineHierarchy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_72refineHierarchy}, {"coarsenHierarchy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_75coarsenHierarchy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_74coarsenHierarchy}, {"setDefaultSection", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_77setDefaultSection, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_76setDefaultSection}, {"getDefaultSection", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_79getDefaultSection, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_78getDefaultSection}, {"setDefaultGlobalSection", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_81setDefaultGlobalSection, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_80setDefaultGlobalSection}, {"getDefaultGlobalSection", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_83getDefaultGlobalSection, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_82getDefaultGlobalSection}, {"createDefaultSF", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_85createDefaultSF, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_84createDefaultSF}, {"getDefaultSF", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_87getDefaultSF, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_86getDefaultSF}, {"getPointSF", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_89getPointSF, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_88getPointSF}, {"setPointSF", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_91setPointSF, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_90setPointSF}, {"getNumLabels", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_93getNumLabels, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_92getNumLabels}, {"getLabelName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_95getLabelName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_94getLabelName}, {"hasLabel", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_97hasLabel, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_96hasLabel}, {"createLabel", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_99createLabel, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_98createLabel}, {"removeLabel", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_101removeLabel, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_100removeLabel}, {"getLabelValue", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_103getLabelValue, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_102getLabelValue}, {"setLabelValue", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_105setLabelValue, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_104setLabelValue}, {"clearLabelValue", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_107clearLabelValue, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_106clearLabelValue}, {"getLabelSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_109getLabelSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_108getLabelSize}, {"getLabelIdIS", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_111getLabelIdIS, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_110getLabelIdIS}, {"getStratumSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_113getStratumSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_112getStratumSize}, {"getStratumIS", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_115getStratumIS, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_114getStratumIS}, {"clearLabelStratum", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_117clearLabelStratum, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_116clearLabelStratum}, {"setLabelOutput", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_119setLabelOutput, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_118setLabelOutput}, {"getLabelOutput", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_2DM_121getLabelOutput, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_2DM_120getLabelOutput}, {0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscDM_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.DM", /*tp_name*/ sizeof(struct PyPetscDMObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_DM, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_DM, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Partitioner __pyx_vtable_8petsc4py_5PETSc_Partitioner; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Partitioner(PyTypeObject *t, PyObject *a, PyObject *k) { struct PyPetscPartitionerObject *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Object(t, a, k); if (unlikely(!o)) return 0; p = ((struct PyPetscPartitionerObject *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_Partitioner; if (unlikely(__pyx_pw_8petsc4py_5PETSc_11Partitioner_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_Partitioner[] = { {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11Partitioner_3view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11Partitioner_2view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11Partitioner_5destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11Partitioner_4destroy}, {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11Partitioner_7create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11Partitioner_6create}, {"setType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11Partitioner_9setType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11Partitioner_8setType}, {"getType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11Partitioner_11getType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11Partitioner_10getType}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11Partitioner_13setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11Partitioner_12setFromOptions}, {"setUp", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11Partitioner_15setUp, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11Partitioner_14setUp}, {"setShellPartition", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11Partitioner_17setShellPartition, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11Partitioner_16setShellPartition}, {0, 0, 0, 0} }; DL_EXPORT(PyTypeObject) PyPetscPartitioner_Type = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.Partitioner", /*tp_name*/ sizeof(struct PyPetscPartitionerObject), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_Partitioner, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_Partitioner, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc__IS_buffer __pyx_vtable_8petsc4py_5PETSc__IS_buffer; static PyObject *__pyx_tp_new_8petsc4py_5PETSc__IS_buffer(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *p; PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; p = ((struct __pyx_obj_8petsc4py_5PETSc__IS_buffer *)o); p->__pyx_vtab = __pyx_vtabptr_8petsc4py_5PETSc__IS_buffer; if (unlikely(__pyx_pw_8petsc4py_5PETSc_10_IS_buffer_1__cinit__(o, a, k) < 0)) { Py_DECREF(o); o = 0; } return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc__IS_buffer(PyObject *o) { #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif { PyObject *etype, *eval, *etb; PyErr_Fetch(&etype, &eval, &etb); ++Py_REFCNT(o); __pyx_pw_8petsc4py_5PETSc_10_IS_buffer_3__dealloc__(o); --Py_REFCNT(o); PyErr_Restore(etype, eval, etb); } (*Py_TYPE(o)->tp_free)(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_10_IS_buffer___array_interface__(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_10_IS_buffer_19__array_interface___1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc__IS_buffer[] = { {"__enter__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_10_IS_buffer_9__enter__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_10_IS_buffer_8__enter__}, {"__exit__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_10_IS_buffer_11__exit__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_10_IS_buffer_10__exit__}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc__IS_buffer[] = { {(char *)"__array_interface__", __pyx_getprop_8petsc4py_5PETSc_10_IS_buffer___array_interface__, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyBufferProcs __pyx_tp_as_buffer__IS_buffer = { #if PY_MAJOR_VERSION < 3 __pyx_pw_8petsc4py_5PETSc_10_IS_buffer_15__getreadbuffer__, /*bf_getreadbuffer*/ #endif #if PY_MAJOR_VERSION < 3 0, /*bf_getwritebuffer*/ #endif #if PY_MAJOR_VERSION < 3 __pyx_pw_8petsc4py_5PETSc_10_IS_buffer_13__getsegcount__, /*bf_getsegcount*/ #endif #if PY_MAJOR_VERSION < 3 0, /*bf_getcharbuffer*/ #endif __pyx_pw_8petsc4py_5PETSc_10_IS_buffer_5__getbuffer__, /*bf_getbuffer*/ __pyx_pw_8petsc4py_5PETSc_10_IS_buffer_7__releasebuffer__, /*bf_releasebuffer*/ }; static PyTypeObject __pyx_type_8petsc4py_5PETSc__IS_buffer = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc._IS_buffer", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc__IS_buffer), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc__IS_buffer, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ &__pyx_tp_as_buffer__IS_buffer, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE, /*tp_flags*/ 0, /*tp_doc*/ 0, /*tp_traverse*/ 0, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc__IS_buffer, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc__IS_buffer, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc__IS_buffer, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc__Vec_buffer __pyx_vtable_8petsc4py_5PETSc__Vec_buffer; static PyObject *__pyx_tp_new_8petsc4py_5PETSc__Vec_buffer(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *p; PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; p = ((struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *)o); p->__pyx_vtab = __pyx_vtabptr_8petsc4py_5PETSc__Vec_buffer; if (unlikely(__pyx_pw_8petsc4py_5PETSc_11_Vec_buffer_1__cinit__(o, a, k) < 0)) { Py_DECREF(o); o = 0; } return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc__Vec_buffer(PyObject *o) { #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif { PyObject *etype, *eval, *etb; PyErr_Fetch(&etype, &eval, &etb); ++Py_REFCNT(o); __pyx_pw_8petsc4py_5PETSc_11_Vec_buffer_3__dealloc__(o); --Py_REFCNT(o); PyErr_Restore(etype, eval, etb); } (*Py_TYPE(o)->tp_free)(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_11_Vec_buffer___array_interface__(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_11_Vec_buffer_19__array_interface___1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc__Vec_buffer[] = { {"__enter__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11_Vec_buffer_9__enter__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11_Vec_buffer_8__enter__}, {"__exit__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11_Vec_buffer_11__exit__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11_Vec_buffer_10__exit__}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc__Vec_buffer[] = { {(char *)"__array_interface__", __pyx_getprop_8petsc4py_5PETSc_11_Vec_buffer___array_interface__, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyBufferProcs __pyx_tp_as_buffer__Vec_buffer = { #if PY_MAJOR_VERSION < 3 __pyx_pw_8petsc4py_5PETSc_11_Vec_buffer_15__getreadbuffer__, /*bf_getreadbuffer*/ #endif #if PY_MAJOR_VERSION < 3 __pyx_pw_8petsc4py_5PETSc_11_Vec_buffer_17__getwritebuffer__, /*bf_getwritebuffer*/ #endif #if PY_MAJOR_VERSION < 3 __pyx_pw_8petsc4py_5PETSc_11_Vec_buffer_13__getsegcount__, /*bf_getsegcount*/ #endif #if PY_MAJOR_VERSION < 3 0, /*bf_getcharbuffer*/ #endif __pyx_pw_8petsc4py_5PETSc_11_Vec_buffer_5__getbuffer__, /*bf_getbuffer*/ __pyx_pw_8petsc4py_5PETSc_11_Vec_buffer_7__releasebuffer__, /*bf_releasebuffer*/ }; static PyTypeObject __pyx_type_8petsc4py_5PETSc__Vec_buffer = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc._Vec_buffer", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc__Vec_buffer, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ &__pyx_tp_as_buffer__Vec_buffer, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE, /*tp_flags*/ 0, /*tp_doc*/ 0, /*tp_traverse*/ 0, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc__Vec_buffer, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc__Vec_buffer, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc__Vec_buffer, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static PyObject *__pyx_tp_new_8petsc4py_5PETSc__Vec_LocalForm(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm *p; PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; p = ((struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm *)o); p->gvec = ((struct PyPetscVecObject *)Py_None); Py_INCREF(Py_None); p->lvec = ((struct PyPetscVecObject *)Py_None); Py_INCREF(Py_None); return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc__Vec_LocalForm(PyObject *o) { struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm *p = (struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm *)o; #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif PyObject_GC_UnTrack(o); Py_CLEAR(p->gvec); Py_CLEAR(p->lvec); (*Py_TYPE(o)->tp_free)(o); } static int __pyx_tp_traverse_8petsc4py_5PETSc__Vec_LocalForm(PyObject *o, visitproc v, void *a) { int e; struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm *p = (struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm *)o; if (p->gvec) { e = (*v)(((PyObject*)p->gvec), a); if (e) return e; } if (p->lvec) { e = (*v)(((PyObject*)p->lvec), a); if (e) return e; } return 0; } static int __pyx_tp_clear_8petsc4py_5PETSc__Vec_LocalForm(PyObject *o) { PyObject* tmp; struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm *p = (struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm *)o; tmp = ((PyObject*)p->gvec); p->gvec = ((struct PyPetscVecObject *)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->lvec); p->lvec = ((struct PyPetscVecObject *)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc__Vec_LocalForm[] = { {"__enter__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_14_Vec_LocalForm_3__enter__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_14_Vec_LocalForm_2__enter__}, {"__exit__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_14_Vec_LocalForm_5__exit__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_14_Vec_LocalForm_4__exit__}, {0, 0, 0, 0} }; static PyTypeObject __pyx_type_8petsc4py_5PETSc__Vec_LocalForm = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc._Vec_LocalForm", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc__Vec_LocalForm), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc__Vec_LocalForm, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ "_Vec_LocalForm(Vec gvec)\nContext manager for `Vec` local form", /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc__Vec_LocalForm, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc__Vec_LocalForm, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc__Vec_LocalForm, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ __pyx_pw_8petsc4py_5PETSc_14_Vec_LocalForm_1__init__, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc__Vec_LocalForm, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static PyObject *__pyx_tp_new_8petsc4py_5PETSc__Mat_Stencil(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc__Mat_Stencil(PyObject *o) { #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif (*Py_TYPE(o)->tp_free)(o); } static int __pyx_setprop_8petsc4py_5PETSc_12_Mat_Stencil_i(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_12_Mat_Stencil_1i_1__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static int __pyx_setprop_8petsc4py_5PETSc_12_Mat_Stencil_j(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_12_Mat_Stencil_1j_1__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static int __pyx_setprop_8petsc4py_5PETSc_12_Mat_Stencil_k(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_12_Mat_Stencil_1k_1__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static int __pyx_setprop_8petsc4py_5PETSc_12_Mat_Stencil_c(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_12_Mat_Stencil_1c_1__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static int __pyx_setprop_8petsc4py_5PETSc_12_Mat_Stencil_index(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_12_Mat_Stencil_5index_1__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static int __pyx_setprop_8petsc4py_5PETSc_12_Mat_Stencil_field(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_12_Mat_Stencil_5field_1__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc__Mat_Stencil[] = { {(char *)"i", 0, __pyx_setprop_8petsc4py_5PETSc_12_Mat_Stencil_i, (char *)0, 0}, {(char *)"j", 0, __pyx_setprop_8petsc4py_5PETSc_12_Mat_Stencil_j, (char *)0, 0}, {(char *)"k", 0, __pyx_setprop_8petsc4py_5PETSc_12_Mat_Stencil_k, (char *)0, 0}, {(char *)"c", 0, __pyx_setprop_8petsc4py_5PETSc_12_Mat_Stencil_c, (char *)0, 0}, {(char *)"index", 0, __pyx_setprop_8petsc4py_5PETSc_12_Mat_Stencil_index, (char *)0, 0}, {(char *)"field", 0, __pyx_setprop_8petsc4py_5PETSc_12_Mat_Stencil_field, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyTypeObject __pyx_type_8petsc4py_5PETSc__Mat_Stencil = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc._Mat_Stencil", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc__Mat_Stencil), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc__Mat_Stencil, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE, /*tp_flags*/ 0, /*tp_doc*/ 0, /*tp_traverse*/ 0, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ 0, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc__Mat_Stencil, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc__Mat_Stencil, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc__DMDA_Vec_array __pyx_vtable_8petsc4py_5PETSc__DMDA_Vec_array; static PyObject *__pyx_tp_new_8petsc4py_5PETSc__DMDA_Vec_array(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *p; PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; p = ((struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *)o); p->__pyx_vtab = __pyx_vtabptr_8petsc4py_5PETSc__DMDA_Vec_array; p->vecbuf = ((struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *)Py_None); Py_INCREF(Py_None); p->starts = ((PyObject*)Py_None); Py_INCREF(Py_None); p->sizes = ((PyObject*)Py_None); Py_INCREF(Py_None); p->shape = ((PyObject*)Py_None); Py_INCREF(Py_None); p->strides = ((PyObject*)Py_None); Py_INCREF(Py_None); p->array = ((PyArrayObject *)Py_None); Py_INCREF(Py_None); if (unlikely(__pyx_pw_8petsc4py_5PETSc_15_DMDA_Vec_array_1__cinit__(o, a, k) < 0)) { Py_DECREF(o); o = 0; } return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc__DMDA_Vec_array(PyObject *o) { struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *p = (struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *)o; #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif PyObject_GC_UnTrack(o); Py_CLEAR(p->vecbuf); Py_CLEAR(p->starts); Py_CLEAR(p->sizes); Py_CLEAR(p->shape); Py_CLEAR(p->strides); Py_CLEAR(p->array); (*Py_TYPE(o)->tp_free)(o); } static int __pyx_tp_traverse_8petsc4py_5PETSc__DMDA_Vec_array(PyObject *o, visitproc v, void *a) { int e; struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *p = (struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *)o; if (p->vecbuf) { e = (*v)(((PyObject*)p->vecbuf), a); if (e) return e; } if (p->starts) { e = (*v)(p->starts, a); if (e) return e; } if (p->sizes) { e = (*v)(p->sizes, a); if (e) return e; } if (p->shape) { e = (*v)(p->shape, a); if (e) return e; } if (p->strides) { e = (*v)(p->strides, a); if (e) return e; } if (p->array) { e = (*v)(((PyObject*)p->array), a); if (e) return e; } return 0; } static int __pyx_tp_clear_8petsc4py_5PETSc__DMDA_Vec_array(PyObject *o) { PyObject* tmp; struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *p = (struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array *)o; tmp = ((PyObject*)p->vecbuf); p->vecbuf = ((struct __pyx_obj_8petsc4py_5PETSc__Vec_buffer *)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->starts); p->starts = ((PyObject*)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->sizes); p->sizes = ((PyObject*)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->shape); p->shape = ((PyObject*)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->strides); p->strides = ((PyObject*)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->array); p->array = ((PyArrayObject *)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyObject *__pyx_sq_item_8petsc4py_5PETSc__DMDA_Vec_array(PyObject *o, Py_ssize_t i) { PyObject *r; PyObject *x = PyInt_FromSsize_t(i); if(!x) return 0; r = Py_TYPE(o)->tp_as_mapping->mp_subscript(o, x); Py_DECREF(x); return r; } static int __pyx_mp_ass_subscript_8petsc4py_5PETSc__DMDA_Vec_array(PyObject *o, PyObject *i, PyObject *v) { if (v) { return __pyx_pw_8petsc4py_5PETSc_15_DMDA_Vec_array_5__setitem__(o, i, v); } else { PyErr_Format(PyExc_NotImplementedError, "Subscript deletion not supported by %.200s", Py_TYPE(o)->tp_name); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_15_DMDA_Vec_array_starts(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_15_DMDA_Vec_array_6starts_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_15_DMDA_Vec_array_sizes(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_15_DMDA_Vec_array_5sizes_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_15_DMDA_Vec_array_shape(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_15_DMDA_Vec_array_5shape_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_15_DMDA_Vec_array_strides(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_15_DMDA_Vec_array_7strides_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_15_DMDA_Vec_array_array(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_15_DMDA_Vec_array_5array_1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc__DMDA_Vec_array[] = { {"__enter__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_15_DMDA_Vec_array_7__enter__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_15_DMDA_Vec_array_6__enter__}, {"__exit__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_15_DMDA_Vec_array_9__exit__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_15_DMDA_Vec_array_8__exit__}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc__DMDA_Vec_array[] = { {(char *)"starts", __pyx_getprop_8petsc4py_5PETSc_15_DMDA_Vec_array_starts, 0, (char *)0, 0}, {(char *)"sizes", __pyx_getprop_8petsc4py_5PETSc_15_DMDA_Vec_array_sizes, 0, (char *)0, 0}, {(char *)"shape", __pyx_getprop_8petsc4py_5PETSc_15_DMDA_Vec_array_shape, 0, (char *)0, 0}, {(char *)"strides", __pyx_getprop_8petsc4py_5PETSc_15_DMDA_Vec_array_strides, 0, (char *)0, 0}, {(char *)"array", __pyx_getprop_8petsc4py_5PETSc_15_DMDA_Vec_array_array, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PySequenceMethods __pyx_tp_as_sequence__DMDA_Vec_array = { 0, /*sq_length*/ 0, /*sq_concat*/ 0, /*sq_repeat*/ __pyx_sq_item_8petsc4py_5PETSc__DMDA_Vec_array, /*sq_item*/ 0, /*sq_slice*/ 0, /*sq_ass_item*/ 0, /*sq_ass_slice*/ 0, /*sq_contains*/ 0, /*sq_inplace_concat*/ 0, /*sq_inplace_repeat*/ }; static PyMappingMethods __pyx_tp_as_mapping__DMDA_Vec_array = { 0, /*mp_length*/ __pyx_pw_8petsc4py_5PETSc_15_DMDA_Vec_array_3__getitem__, /*mp_subscript*/ __pyx_mp_ass_subscript_8petsc4py_5PETSc__DMDA_Vec_array, /*mp_ass_subscript*/ }; static PyTypeObject __pyx_type_8petsc4py_5PETSc__DMDA_Vec_array = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc._DMDA_Vec_array", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc__DMDA_Vec_array), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc__DMDA_Vec_array, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ &__pyx_tp_as_sequence__DMDA_Vec_array, /*tp_as_sequence*/ &__pyx_tp_as_mapping__DMDA_Vec_array, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc__DMDA_Vec_array, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc__DMDA_Vec_array, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc__DMDA_Vec_array, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc__DMDA_Vec_array, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc__DMDA_Vec_array, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static PyObject *__pyx_tp_new_8petsc4py_5PETSc__DMComposite_access(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access *p; PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; p = ((struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access *)o); p->locs_mem = Py_None; Py_INCREF(Py_None); p->vecs_mem = Py_None; Py_INCREF(Py_None); p->access = Py_None; Py_INCREF(Py_None); if (unlikely(__pyx_pw_8petsc4py_5PETSc_19_DMComposite_access_1__cinit__(o, a, k) < 0)) { Py_DECREF(o); o = 0; } return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc__DMComposite_access(PyObject *o) { struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access *p = (struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access *)o; #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif PyObject_GC_UnTrack(o); { PyObject *etype, *eval, *etb; PyErr_Fetch(&etype, &eval, &etb); ++Py_REFCNT(o); __pyx_pw_8petsc4py_5PETSc_19_DMComposite_access_3__dealloc__(o); --Py_REFCNT(o); PyErr_Restore(etype, eval, etb); } Py_CLEAR(p->locs_mem); Py_CLEAR(p->vecs_mem); Py_CLEAR(p->access); (*Py_TYPE(o)->tp_free)(o); } static int __pyx_tp_traverse_8petsc4py_5PETSc__DMComposite_access(PyObject *o, visitproc v, void *a) { int e; struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access *p = (struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access *)o; if (p->locs_mem) { e = (*v)(p->locs_mem, a); if (e) return e; } if (p->vecs_mem) { e = (*v)(p->vecs_mem, a); if (e) return e; } if (p->access) { e = (*v)(p->access, a); if (e) return e; } return 0; } static int __pyx_tp_clear_8petsc4py_5PETSc__DMComposite_access(PyObject *o) { PyObject* tmp; struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access *p = (struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access *)o; tmp = ((PyObject*)p->locs_mem); p->locs_mem = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->vecs_mem); p->vecs_mem = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->access); p->access = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc__DMComposite_access[] = { {"__enter__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_19_DMComposite_access_5__enter__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_19_DMComposite_access_4__enter__}, {"__exit__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_19_DMComposite_access_7__exit__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_19_DMComposite_access_6__exit__}, {0, 0, 0, 0} }; static PyTypeObject __pyx_type_8petsc4py_5PETSc__DMComposite_access = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc._DMComposite_access", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc__DMComposite_access), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc__DMComposite_access, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc__DMComposite_access, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc__DMComposite_access, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc__DMComposite_access, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc__DMComposite_access, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Options(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { struct __pyx_obj_8petsc4py_5PETSc_Options *p; PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; p = ((struct __pyx_obj_8petsc4py_5PETSc_Options *)o); p->_prefix = Py_None; Py_INCREF(Py_None); return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc_Options(PyObject *o) { struct __pyx_obj_8petsc4py_5PETSc_Options *p = (struct __pyx_obj_8petsc4py_5PETSc_Options *)o; #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif PyObject_GC_UnTrack(o); { PyObject *etype, *eval, *etb; PyErr_Fetch(&etype, &eval, &etb); ++Py_REFCNT(o); __pyx_pw_8petsc4py_5PETSc_7Options_3__dealloc__(o); --Py_REFCNT(o); PyErr_Restore(etype, eval, etb); } Py_CLEAR(p->_prefix); (*Py_TYPE(o)->tp_free)(o); } static int __pyx_tp_traverse_8petsc4py_5PETSc_Options(PyObject *o, visitproc v, void *a) { int e; struct __pyx_obj_8petsc4py_5PETSc_Options *p = (struct __pyx_obj_8petsc4py_5PETSc_Options *)o; if (p->_prefix) { e = (*v)(p->_prefix, a); if (e) return e; } return 0; } static int __pyx_tp_clear_8petsc4py_5PETSc_Options(PyObject *o) { PyObject* tmp; struct __pyx_obj_8petsc4py_5PETSc_Options *p = (struct __pyx_obj_8petsc4py_5PETSc_Options *)o; tmp = ((PyObject*)p->_prefix); p->_prefix = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyObject *__pyx_sq_item_8petsc4py_5PETSc_Options(PyObject *o, Py_ssize_t i) { PyObject *r; PyObject *x = PyInt_FromSsize_t(i); if(!x) return 0; r = Py_TYPE(o)->tp_as_mapping->mp_subscript(o, x); Py_DECREF(x); return r; } static int __pyx_mp_ass_subscript_8petsc4py_5PETSc_Options(PyObject *o, PyObject *i, PyObject *v) { if (v) { return __pyx_pw_8petsc4py_5PETSc_7Options_9__setitem__(o, i, v); } else { return __pyx_pw_8petsc4py_5PETSc_7Options_11__delitem__(o, i); } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_7Options_prefix(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_7Options_6prefix_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_7Options_prefix(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_7Options_6prefix_3__set__(o, v); } else { return __pyx_pw_8petsc4py_5PETSc_7Options_6prefix_5__del__(o); } } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_Options[] = { {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_13create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_12create}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_15destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_14destroy}, {"clear", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_17clear, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_16clear}, {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_19view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_18view}, {"setFromOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_21setFromOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_20setFromOptions}, {"prefixPush", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_23prefixPush, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_22prefixPush}, {"prefixPop", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_25prefixPop, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_24prefixPop}, {"hasName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_27hasName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_26hasName}, {"setValue", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_29setValue, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_28setValue}, {"delValue", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_31delValue, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_30delValue}, {"getBool", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_33getBool, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_32getBool}, {"getInt", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_35getInt, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_34getInt}, {"getReal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_37getReal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_36getReal}, {"getScalar", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_39getScalar, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_38getScalar}, {"getString", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_41getString, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_40getString}, {"getAll", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7Options_43getAll, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7Options_42getAll}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_Options[] = { {(char *)"prefix", __pyx_getprop_8petsc4py_5PETSc_7Options_prefix, __pyx_setprop_8petsc4py_5PETSc_7Options_prefix, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PySequenceMethods __pyx_tp_as_sequence_Options = { 0, /*sq_length*/ 0, /*sq_concat*/ 0, /*sq_repeat*/ __pyx_sq_item_8petsc4py_5PETSc_Options, /*sq_item*/ 0, /*sq_slice*/ 0, /*sq_ass_item*/ 0, /*sq_ass_slice*/ __pyx_pw_8petsc4py_5PETSc_7Options_5__contains__, /*sq_contains*/ 0, /*sq_inplace_concat*/ 0, /*sq_inplace_repeat*/ }; static PyMappingMethods __pyx_tp_as_mapping_Options = { 0, /*mp_length*/ __pyx_pw_8petsc4py_5PETSc_7Options_7__getitem__, /*mp_subscript*/ __pyx_mp_ass_subscript_8petsc4py_5PETSc_Options, /*mp_ass_subscript*/ }; static PyTypeObject __pyx_type_8petsc4py_5PETSc_Options = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.Options", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc_Options), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Options, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ &__pyx_tp_as_sequence_Options, /*tp_as_sequence*/ &__pyx_tp_as_mapping_Options, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ "Options(prefix=None)", /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Options, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Options, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_Options, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_Options, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ __pyx_pw_8petsc4py_5PETSc_7Options_1__init__, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_Options, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Sys(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc_Sys(PyObject *o) { #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif (*Py_TYPE(o)->tp_free)(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_Sys[] = { {"getVersion", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_1getVersion, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_getVersion}, {"getVersionInfo", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_3getVersionInfo, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_2getVersionInfo}, {"isInitialized", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_5isInitialized, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_4isInitialized}, {"isFinalized", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_7isFinalized, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_6isFinalized}, {"getDefaultComm", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_9getDefaultComm, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_8getDefaultComm}, {"setDefaultComm", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_11setDefaultComm, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_10setDefaultComm}, {"Print", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_13Print, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_12Print}, {"syncPrint", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_15syncPrint, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_14syncPrint}, {"syncFlush", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_17syncFlush, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_16syncFlush}, {"splitOwnership", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_19splitOwnership, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_18splitOwnership}, {"sleep", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_21sleep, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_20sleep}, {"pushErrorHandler", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_23pushErrorHandler, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_22pushErrorHandler}, {"popErrorHandler", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_25popErrorHandler, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_24popErrorHandler}, {"infoAllow", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_27infoAllow, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_26infoAllow}, {"registerCitation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Sys_29registerCitation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Sys_28registerCitation}, {0, 0, 0, 0} }; static PyTypeObject __pyx_type_8petsc4py_5PETSc_Sys = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.Sys", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc_Sys), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Sys, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE, /*tp_flags*/ 0, /*tp_doc*/ 0, /*tp_traverse*/ 0, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_Sys, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_Sys, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_Log(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc_Log(PyObject *o) { #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif (*Py_TYPE(o)->tp_free)(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_Log[] = { {"Stage", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Log_1Stage, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Log_Stage}, {"Class", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Log_3Class, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Log_2Class}, {"Event", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Log_5Event, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Log_4Event}, {"begin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Log_7begin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Log_6begin}, {"view", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Log_9view, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Log_8view}, {"destroy", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Log_11destroy, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Log_10destroy}, {"logFlops", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Log_13logFlops, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Log_12logFlops}, {"addFlops", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Log_15addFlops, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Log_14addFlops}, {"getFlops", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Log_17getFlops, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Log_16getFlops}, {"getTime", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Log_19getTime, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Log_18getTime}, {"getCPUTime", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_3Log_21getCPUTime, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_3Log_20getCPUTime}, {0, 0, 0, 0} }; static PyTypeObject __pyx_type_8petsc4py_5PETSc_Log = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.Log", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc_Log), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Log, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE, /*tp_flags*/ 0, /*tp_doc*/ 0, /*tp_traverse*/ 0, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_Log, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_Log, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_LogStage(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; if (unlikely(__pyx_pw_8petsc4py_5PETSc_8LogStage_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc_LogStage(PyObject *o) { #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif (*Py_TYPE(o)->tp_free)(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_8LogStage_name(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_8LogStage_4name_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_8LogStage_name(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_8LogStage_4name_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_8LogStage_active(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_8LogStage_6active_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_8LogStage_active(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_8LogStage_6active_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_8LogStage_visible(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_8LogStage_7visible_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_8LogStage_visible(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_8LogStage_7visible_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_8LogStage_id(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_8LogStage_2id_1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_LogStage[] = { {"__enter__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogStage_5__enter__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogStage_4__enter__}, {"__exit__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogStage_7__exit__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogStage_6__exit__}, {"push", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogStage_9push, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogStage_8push}, {"pop", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogStage_11pop, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogStage_10pop}, {"getName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogStage_13getName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogStage_12getName}, {"activate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogStage_15activate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogStage_14activate}, {"deactivate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogStage_17deactivate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogStage_16deactivate}, {"getActive", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogStage_19getActive, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogStage_18getActive}, {"setActive", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogStage_21setActive, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogStage_20setActive}, {"getVisible", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogStage_23getVisible, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogStage_22getVisible}, {"setVisible", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogStage_25setVisible, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogStage_24setVisible}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_LogStage[] = { {(char *)"name", __pyx_getprop_8petsc4py_5PETSc_8LogStage_name, __pyx_setprop_8petsc4py_5PETSc_8LogStage_name, (char *)0, 0}, {(char *)"active", __pyx_getprop_8petsc4py_5PETSc_8LogStage_active, __pyx_setprop_8petsc4py_5PETSc_8LogStage_active, (char *)0, 0}, {(char *)"visible", __pyx_getprop_8petsc4py_5PETSc_8LogStage_visible, __pyx_setprop_8petsc4py_5PETSc_8LogStage_visible, (char *)0, 0}, {(char *)"id", __pyx_getprop_8petsc4py_5PETSc_8LogStage_id, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyNumberMethods __pyx_tp_as_number_LogStage = { 0, /*nb_add*/ 0, /*nb_subtract*/ 0, /*nb_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_divide*/ #endif 0, /*nb_remainder*/ 0, /*nb_divmod*/ 0, /*nb_power*/ 0, /*nb_negative*/ 0, /*nb_positive*/ 0, /*nb_absolute*/ 0, /*nb_nonzero*/ 0, /*nb_invert*/ 0, /*nb_lshift*/ 0, /*nb_rshift*/ 0, /*nb_and*/ 0, /*nb_xor*/ 0, /*nb_or*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_coerce*/ #endif __pyx_pw_8petsc4py_5PETSc_8LogStage_3__int__, /*nb_int*/ #if PY_MAJOR_VERSION < 3 __pyx_pw_8petsc4py_5PETSc_8LogStage_3__int__, /*nb_long*/ #else 0, /*reserved*/ #endif 0, /*nb_float*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_oct*/ #endif #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_hex*/ #endif 0, /*nb_inplace_add*/ 0, /*nb_inplace_subtract*/ 0, /*nb_inplace_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_inplace_divide*/ #endif 0, /*nb_inplace_remainder*/ 0, /*nb_inplace_power*/ 0, /*nb_inplace_lshift*/ 0, /*nb_inplace_rshift*/ 0, /*nb_inplace_and*/ 0, /*nb_inplace_xor*/ 0, /*nb_inplace_or*/ 0, /*nb_floor_divide*/ 0, /*nb_true_divide*/ 0, /*nb_inplace_floor_divide*/ 0, /*nb_inplace_true_divide*/ 0, /*nb_index*/ #if PY_VERSION_HEX >= 0x03050000 0, /*nb_matrix_multiply*/ #endif #if PY_VERSION_HEX >= 0x03050000 0, /*nb_inplace_matrix_multiply*/ #endif }; static PyTypeObject __pyx_type_8petsc4py_5PETSc_LogStage = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.LogStage", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc_LogStage), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_LogStage, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ &__pyx_tp_as_number_LogStage, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE, /*tp_flags*/ 0, /*tp_doc*/ 0, /*tp_traverse*/ 0, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_LogStage, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_LogStage, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_LogStage, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_LogClass(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; if (unlikely(__pyx_pw_8petsc4py_5PETSc_8LogClass_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc_LogClass(PyObject *o) { #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif (*Py_TYPE(o)->tp_free)(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_8LogClass_name(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_8LogClass_4name_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_8LogClass_name(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_8LogClass_4name_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_8LogClass_active(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_8LogClass_6active_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_8LogClass_active(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_8LogClass_6active_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_8LogClass_id(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_8LogClass_2id_1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_LogClass[] = { {"getName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogClass_5getName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogClass_4getName}, {"activate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogClass_7activate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogClass_6activate}, {"deactivate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogClass_9deactivate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogClass_8deactivate}, {"getActive", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogClass_11getActive, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogClass_10getActive}, {"setActive", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogClass_13setActive, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogClass_12setActive}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_LogClass[] = { {(char *)"name", __pyx_getprop_8petsc4py_5PETSc_8LogClass_name, __pyx_setprop_8petsc4py_5PETSc_8LogClass_name, (char *)0, 0}, {(char *)"active", __pyx_getprop_8petsc4py_5PETSc_8LogClass_active, __pyx_setprop_8petsc4py_5PETSc_8LogClass_active, (char *)0, 0}, {(char *)"id", __pyx_getprop_8petsc4py_5PETSc_8LogClass_id, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyNumberMethods __pyx_tp_as_number_LogClass = { 0, /*nb_add*/ 0, /*nb_subtract*/ 0, /*nb_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_divide*/ #endif 0, /*nb_remainder*/ 0, /*nb_divmod*/ 0, /*nb_power*/ 0, /*nb_negative*/ 0, /*nb_positive*/ 0, /*nb_absolute*/ 0, /*nb_nonzero*/ 0, /*nb_invert*/ 0, /*nb_lshift*/ 0, /*nb_rshift*/ 0, /*nb_and*/ 0, /*nb_xor*/ 0, /*nb_or*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_coerce*/ #endif __pyx_pw_8petsc4py_5PETSc_8LogClass_3__int__, /*nb_int*/ #if PY_MAJOR_VERSION < 3 __pyx_pw_8petsc4py_5PETSc_8LogClass_3__int__, /*nb_long*/ #else 0, /*reserved*/ #endif 0, /*nb_float*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_oct*/ #endif #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_hex*/ #endif 0, /*nb_inplace_add*/ 0, /*nb_inplace_subtract*/ 0, /*nb_inplace_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_inplace_divide*/ #endif 0, /*nb_inplace_remainder*/ 0, /*nb_inplace_power*/ 0, /*nb_inplace_lshift*/ 0, /*nb_inplace_rshift*/ 0, /*nb_inplace_and*/ 0, /*nb_inplace_xor*/ 0, /*nb_inplace_or*/ 0, /*nb_floor_divide*/ 0, /*nb_true_divide*/ 0, /*nb_inplace_floor_divide*/ 0, /*nb_inplace_true_divide*/ 0, /*nb_index*/ #if PY_VERSION_HEX >= 0x03050000 0, /*nb_matrix_multiply*/ #endif #if PY_VERSION_HEX >= 0x03050000 0, /*nb_inplace_matrix_multiply*/ #endif }; static PyTypeObject __pyx_type_8petsc4py_5PETSc_LogClass = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.LogClass", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc_LogClass), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_LogClass, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ &__pyx_tp_as_number_LogClass, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE, /*tp_flags*/ 0, /*tp_doc*/ 0, /*tp_traverse*/ 0, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_LogClass, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_LogClass, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_LogClass, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_LogEvent(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { PyObject *o; if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; if (unlikely(__pyx_pw_8petsc4py_5PETSc_8LogEvent_1__cinit__(o, __pyx_empty_tuple, NULL) < 0)) { Py_DECREF(o); o = 0; } return o; } static void __pyx_tp_dealloc_8petsc4py_5PETSc_LogEvent(PyObject *o) { #if PY_VERSION_HEX >= 0x030400a1 if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif (*Py_TYPE(o)->tp_free)(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_8LogEvent_name(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_8LogEvent_4name_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_8LogEvent_name(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_8LogEvent_4name_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_8LogEvent_active(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_8LogEvent_6active_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_8LogEvent_active(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_8LogEvent_6active_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_8LogEvent_active_all(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_8LogEvent_10active_all_1__get__(o); } static int __pyx_setprop_8petsc4py_5PETSc_8LogEvent_active_all(PyObject *o, PyObject *v, CYTHON_UNUSED void *x) { if (v) { return __pyx_pw_8petsc4py_5PETSc_8LogEvent_10active_all_3__set__(o, v); } else { PyErr_SetString(PyExc_NotImplementedError, "__del__"); return -1; } } static PyObject *__pyx_getprop_8petsc4py_5PETSc_8LogEvent_id(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_8LogEvent_2id_1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_LogEvent[] = { {"__enter__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_5__enter__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_4__enter__}, {"__exit__", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_7__exit__, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_6__exit__}, {"begin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_9begin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_8begin}, {"end", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_11end, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_10end}, {"barrierBegin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_13barrierBegin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_12barrierBegin}, {"barrierEnd", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_15barrierEnd, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_14barrierEnd}, {"getName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_17getName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_16getName}, {"activate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_19activate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_18activate}, {"deactivate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_21deactivate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_20deactivate}, {"getActive", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_23getActive, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_22getActive}, {"setActive", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_25setActive, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_24setActive}, {"getActiveAll", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_27getActiveAll, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_26getActiveAll}, {"setActiveAll", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_29setActiveAll, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_28setActiveAll}, {"getPerfInfo", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_8LogEvent_31getPerfInfo, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_8LogEvent_30getPerfInfo}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_LogEvent[] = { {(char *)"name", __pyx_getprop_8petsc4py_5PETSc_8LogEvent_name, __pyx_setprop_8petsc4py_5PETSc_8LogEvent_name, (char *)0, 0}, {(char *)"active", __pyx_getprop_8petsc4py_5PETSc_8LogEvent_active, __pyx_setprop_8petsc4py_5PETSc_8LogEvent_active, (char *)0, 0}, {(char *)"active_all", __pyx_getprop_8petsc4py_5PETSc_8LogEvent_active_all, __pyx_setprop_8petsc4py_5PETSc_8LogEvent_active_all, (char *)0, 0}, {(char *)"id", __pyx_getprop_8petsc4py_5PETSc_8LogEvent_id, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyNumberMethods __pyx_tp_as_number_LogEvent = { 0, /*nb_add*/ 0, /*nb_subtract*/ 0, /*nb_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_divide*/ #endif 0, /*nb_remainder*/ 0, /*nb_divmod*/ 0, /*nb_power*/ 0, /*nb_negative*/ 0, /*nb_positive*/ 0, /*nb_absolute*/ 0, /*nb_nonzero*/ 0, /*nb_invert*/ 0, /*nb_lshift*/ 0, /*nb_rshift*/ 0, /*nb_and*/ 0, /*nb_xor*/ 0, /*nb_or*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_coerce*/ #endif __pyx_pw_8petsc4py_5PETSc_8LogEvent_3__int__, /*nb_int*/ #if PY_MAJOR_VERSION < 3 __pyx_pw_8petsc4py_5PETSc_8LogEvent_3__int__, /*nb_long*/ #else 0, /*reserved*/ #endif 0, /*nb_float*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_oct*/ #endif #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_hex*/ #endif 0, /*nb_inplace_add*/ 0, /*nb_inplace_subtract*/ 0, /*nb_inplace_multiply*/ #if PY_MAJOR_VERSION < 3 || CYTHON_COMPILING_IN_PYPY 0, /*nb_inplace_divide*/ #endif 0, /*nb_inplace_remainder*/ 0, /*nb_inplace_power*/ 0, /*nb_inplace_lshift*/ 0, /*nb_inplace_rshift*/ 0, /*nb_inplace_and*/ 0, /*nb_inplace_xor*/ 0, /*nb_inplace_or*/ 0, /*nb_floor_divide*/ 0, /*nb_true_divide*/ 0, /*nb_inplace_floor_divide*/ 0, /*nb_inplace_true_divide*/ 0, /*nb_index*/ #if PY_VERSION_HEX >= 0x03050000 0, /*nb_matrix_multiply*/ #endif #if PY_VERSION_HEX >= 0x03050000 0, /*nb_inplace_matrix_multiply*/ #endif }; static PyTypeObject __pyx_type_8petsc4py_5PETSc_LogEvent = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.LogEvent", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc_LogEvent), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_LogEvent, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ &__pyx_tp_as_number_LogEvent, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE, /*tp_flags*/ 0, /*tp_doc*/ 0, /*tp_traverse*/ 0, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_LogEvent, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_LogEvent, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_LogEvent, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_ViewerHDF5 __pyx_vtable_8petsc4py_5PETSc_ViewerHDF5; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_ViewerHDF5(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_8petsc4py_5PETSc_ViewerHDF5 *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_Viewer(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_8petsc4py_5PETSc_ViewerHDF5 *)o); p->__pyx_base.__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_ViewerHDF5; return o; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_ViewerHDF5[] = { {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_10ViewerHDF5_1create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_10ViewerHDF5_create}, {"getTimestep", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_10ViewerHDF5_3getTimestep, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_10ViewerHDF5_2getTimestep}, {"setTimestep", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_10ViewerHDF5_5setTimestep, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_10ViewerHDF5_4setTimestep}, {"incrementTimestep", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_10ViewerHDF5_7incrementTimestep, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_10ViewerHDF5_6incrementTimestep}, {"pushGroup", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_10ViewerHDF5_9pushGroup, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_10ViewerHDF5_8pushGroup}, {"popGroup", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_10ViewerHDF5_11popGroup, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_10ViewerHDF5_10popGroup}, {"getGroup", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_10ViewerHDF5_13getGroup, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_10ViewerHDF5_12getGroup}, {0, 0, 0, 0} }; static PyTypeObject __pyx_type_8petsc4py_5PETSc_ViewerHDF5 = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.ViewerHDF5", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc_ViewerHDF5), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ #if CYTHON_COMPILING_IN_PYPY __pyx_pw_8petsc4py_5PETSc_6Viewer_3__call__, /*tp_call*/ #else 0, /*tp_call*/ #endif 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_ViewerHDF5, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_ViewerHDF5, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_DMDA __pyx_vtable_8petsc4py_5PETSc_DMDA; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_DMDA(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_8petsc4py_5PETSc_DMDA *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_DM(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_8petsc4py_5PETSc_DMDA *)o); p->__pyx_base.__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_DMDA; return o; } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4DMDA_dim(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4DMDA_3dim_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4DMDA_dof(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4DMDA_3dof_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4DMDA_sizes(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4DMDA_5sizes_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4DMDA_proc_sizes(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4DMDA_10proc_sizes_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4DMDA_boundary_type(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4DMDA_13boundary_type_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4DMDA_stencil(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4DMDA_7stencil_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4DMDA_stencil_type(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4DMDA_12stencil_type_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4DMDA_stencil_width(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4DMDA_13stencil_width_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4DMDA_ranges(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4DMDA_6ranges_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4DMDA_ghost_ranges(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4DMDA_12ghost_ranges_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4DMDA_corners(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4DMDA_7corners_1__get__(o); } static PyObject *__pyx_getprop_8petsc4py_5PETSc_4DMDA_ghost_corners(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_8petsc4py_5PETSc_4DMDA_13ghost_corners_1__get__(o); } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_DMDA[] = { {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_1create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_create}, {"duplicate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_3duplicate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_2duplicate}, {"setDim", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_5setDim, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_4setDim}, {"getDim", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_7getDim, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_6getDim}, {"setDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_9setDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_8setDof}, {"getDof", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_11getDof, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_10getDof}, {"setSizes", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_13setSizes, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_12setSizes}, {"getSizes", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_15getSizes, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_14getSizes}, {"setProcSizes", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_17setProcSizes, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_16setProcSizes}, {"getProcSizes", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_19getProcSizes, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_18getProcSizes}, {"setBoundaryType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_21setBoundaryType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_20setBoundaryType}, {"getBoundaryType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_23getBoundaryType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_22getBoundaryType}, {"setStencilType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_25setStencilType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_24setStencilType}, {"getStencilType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_27getStencilType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_26getStencilType}, {"setStencilWidth", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_29setStencilWidth, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_28setStencilWidth}, {"getStencilWidth", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_31getStencilWidth, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_30getStencilWidth}, {"setStencil", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_33setStencil, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_32setStencil}, {"getStencil", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_35getStencil, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_34getStencil}, {"getRanges", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_37getRanges, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_36getRanges}, {"getGhostRanges", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_39getGhostRanges, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_38getGhostRanges}, {"getOwnershipRanges", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_41getOwnershipRanges, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_40getOwnershipRanges}, {"getCorners", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_43getCorners, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_42getCorners}, {"getGhostCorners", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_45getGhostCorners, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_44getGhostCorners}, {"setFieldName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_47setFieldName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_46setFieldName}, {"getFieldName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_49getFieldName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_48getFieldName}, {"getVecArray", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_51getVecArray, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_50getVecArray}, {"setUniformCoordinates", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_53setUniformCoordinates, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_52setUniformCoordinates}, {"setCoordinateName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_55setCoordinateName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_54setCoordinateName}, {"getCoordinateName", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_57getCoordinateName, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_56getCoordinateName}, {"getBoundingBox", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_59getBoundingBox, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_58getBoundingBox}, {"getLocalBoundingBox", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_61getLocalBoundingBox, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_60getLocalBoundingBox}, {"createNaturalVec", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_63createNaturalVec, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_62createNaturalVec}, {"globalToNatural", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_65globalToNatural, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_64globalToNatural}, {"naturalToGlobal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_67naturalToGlobal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_66naturalToGlobal}, {"getAO", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_69getAO, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_68getAO}, {"getScatter", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_71getScatter, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_70getScatter}, {"setRefinementFactor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_73setRefinementFactor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_72setRefinementFactor}, {"getRefinementFactor", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_75getRefinementFactor, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_74getRefinementFactor}, {"setInterpolationType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_77setInterpolationType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_76setInterpolationType}, {"getInterpolationType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_79getInterpolationType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_78getInterpolationType}, {"setElementType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_81setElementType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_80setElementType}, {"getElementType", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_83getElementType, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_82getElementType}, {"getElements", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_4DMDA_85getElements, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_4DMDA_84getElements}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_8petsc4py_5PETSc_DMDA[] = { {(char *)"dim", __pyx_getprop_8petsc4py_5PETSc_4DMDA_dim, 0, (char *)0, 0}, {(char *)"dof", __pyx_getprop_8petsc4py_5PETSc_4DMDA_dof, 0, (char *)0, 0}, {(char *)"sizes", __pyx_getprop_8petsc4py_5PETSc_4DMDA_sizes, 0, (char *)0, 0}, {(char *)"proc_sizes", __pyx_getprop_8petsc4py_5PETSc_4DMDA_proc_sizes, 0, (char *)0, 0}, {(char *)"boundary_type", __pyx_getprop_8petsc4py_5PETSc_4DMDA_boundary_type, 0, (char *)0, 0}, {(char *)"stencil", __pyx_getprop_8petsc4py_5PETSc_4DMDA_stencil, 0, (char *)0, 0}, {(char *)"stencil_type", __pyx_getprop_8petsc4py_5PETSc_4DMDA_stencil_type, 0, (char *)0, 0}, {(char *)"stencil_width", __pyx_getprop_8petsc4py_5PETSc_4DMDA_stencil_width, 0, (char *)0, 0}, {(char *)"ranges", __pyx_getprop_8petsc4py_5PETSc_4DMDA_ranges, 0, (char *)0, 0}, {(char *)"ghost_ranges", __pyx_getprop_8petsc4py_5PETSc_4DMDA_ghost_ranges, 0, (char *)0, 0}, {(char *)"corners", __pyx_getprop_8petsc4py_5PETSc_4DMDA_corners, 0, (char *)0, 0}, {(char *)"ghost_corners", __pyx_getprop_8petsc4py_5PETSc_4DMDA_ghost_corners, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyTypeObject __pyx_type_8petsc4py_5PETSc_DMDA = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.DMDA", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc_DMDA), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_DMDA, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_8petsc4py_5PETSc_DMDA, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_DMDA, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_DMPlex __pyx_vtable_8petsc4py_5PETSc_DMPlex; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_DMPlex(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_8petsc4py_5PETSc_DMPlex *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_DM(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_8petsc4py_5PETSc_DMPlex *)o); p->__pyx_base.__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_DMPlex; return o; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_DMPlex[] = { {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_1create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_create}, {"createFromCellList", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_3createFromCellList, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_2createFromCellList}, {"createBoxMesh", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_5createBoxMesh, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_4createBoxMesh}, {"createHexBoxMesh", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_7createHexBoxMesh, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_6createHexBoxMesh}, {"createCGNS", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_9createCGNS, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_8createCGNS}, {"createCGNSFromFile", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_11createCGNSFromFile, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_10createCGNSFromFile}, {"createExodusFromFile", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_13createExodusFromFile, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_12createExodusFromFile}, {"createExodus", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_15createExodus, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_14createExodus}, {"createGmsh", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_17createGmsh, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_16createGmsh}, {"createCohesiveSubmesh", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_19createCohesiveSubmesh, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_18createCohesiveSubmesh}, {"getChart", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_21getChart, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_20getChart}, {"setChart", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_23setChart, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_22setChart}, {"getConeSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_25getConeSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_24getConeSize}, {"setConeSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_27setConeSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_26setConeSize}, {"getCone", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_29getCone, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_28getCone}, {"setCone", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_31setCone, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_30setCone}, {"insertCone", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_33insertCone, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_32insertCone}, {"insertConeOrientation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_35insertConeOrientation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_34insertConeOrientation}, {"getConeOrientation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_37getConeOrientation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_36getConeOrientation}, {"setConeOrientation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_39setConeOrientation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_38setConeOrientation}, {"getSupportSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_41getSupportSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_40getSupportSize}, {"setSupportSize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_43setSupportSize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_42setSupportSize}, {"getSupport", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_45getSupport, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_44getSupport}, {"setSupport", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_47setSupport, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_46setSupport}, {"getMaxSizes", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_49getMaxSizes, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_48getMaxSizes}, {"symmetrize", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_51symmetrize, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_50symmetrize}, {"stratify", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_53stratify, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_52stratify}, {"orient", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_55orient, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_54orient}, {"getCellNumbering", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_57getCellNumbering, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_56getCellNumbering}, {"getVertexNumbering", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_59getVertexNumbering, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_58getVertexNumbering}, {"createPointNumbering", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_61createPointNumbering, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_60createPointNumbering}, {"getDepth", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_63getDepth, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_62getDepth}, {"getDepthStratum", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_65getDepthStratum, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_64getDepthStratum}, {"getHeightStratum", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_67getHeightStratum, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_66getHeightStratum}, {"getMeet", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_69getMeet, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_68getMeet}, {"getJoin", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_71getJoin, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_70getJoin}, {"getTransitiveClosure", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_73getTransitiveClosure, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_72getTransitiveClosure}, {"vecGetClosure", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_75vecGetClosure, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_74vecGetClosure}, {"generate", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_77generate, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_76generate}, {"setTriangleOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_79setTriangleOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_78setTriangleOptions}, {"setTetGenOptions", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_81setTetGenOptions, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_80setTetGenOptions}, {"createSquareBoundary", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_83createSquareBoundary, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_82createSquareBoundary}, {"createCubeBoundary", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_85createCubeBoundary, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_84createCubeBoundary}, {"markBoundaryFaces", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_87markBoundaryFaces, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_86markBoundaryFaces}, {"setAdjacencyUseCone", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_89setAdjacencyUseCone, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_88setAdjacencyUseCone}, {"setAdjacencyUseClosure", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_91setAdjacencyUseClosure, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_90setAdjacencyUseClosure}, {"getPartitioner", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_93getPartitioner, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_92getPartitioner}, {"distribute", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_95distribute, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_94distribute}, {"distributeOverlap", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_97distributeOverlap, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_96distributeOverlap}, {"distributeField", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_99distributeField, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_98distributeField}, {"createCoarsePointIS", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_101createCoarsePointIS, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_100createCoarsePointIS}, {"createSection", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_103createSection, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_102createSection}, {"setRefinementUniform", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_105setRefinementUniform, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_104setRefinementUniform}, {"getRefinementUniform", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_107getRefinementUniform, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_106getRefinementUniform}, {"setRefinementLimit", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_109setRefinementLimit, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_108setRefinementLimit}, {"getRefinementLimit", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_111getRefinementLimit, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_110getRefinementLimit}, {"getOrdering", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_113getOrdering, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_112getOrdering}, {"permute", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_115permute, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_114permute}, {"computeCellGeometryFVM", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_6DMPlex_117computeCellGeometryFVM, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_6DMPlex_116computeCellGeometryFVM}, {0, 0, 0, 0} }; static PyTypeObject __pyx_type_8petsc4py_5PETSc_DMPlex = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.DMPlex", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc_DMPlex), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_DMPlex, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_DMPlex, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_DMComposite __pyx_vtable_8petsc4py_5PETSc_DMComposite; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_DMComposite(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_8petsc4py_5PETSc_DMComposite *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_DM(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_8petsc4py_5PETSc_DMComposite *)o); p->__pyx_base.__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_DMComposite; return o; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_DMComposite[] = { {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11DMComposite_1create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11DMComposite_create}, {"addDM", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11DMComposite_3addDM, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11DMComposite_2addDM}, {"getNumber", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11DMComposite_5getNumber, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11DMComposite_4getNumber}, {"getEntries", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11DMComposite_7getEntries, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11DMComposite_6getEntries}, {"scatter", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11DMComposite_9scatter, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11DMComposite_8scatter}, {"gather", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11DMComposite_11gather, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11DMComposite_10gather}, {"getGlobalISs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11DMComposite_13getGlobalISs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11DMComposite_12getGlobalISs}, {"getLocalISs", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11DMComposite_15getLocalISs, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11DMComposite_14getLocalISs}, {"getLGMaps", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11DMComposite_17getLGMaps, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11DMComposite_16getLGMaps}, {"getAccess", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_11DMComposite_19getAccess, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_11DMComposite_18getAccess}, {0, 0, 0, 0} }; static PyTypeObject __pyx_type_8petsc4py_5PETSc_DMComposite = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.DMComposite", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc_DMComposite), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_DMComposite, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_DMComposite, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_DMShell __pyx_vtable_8petsc4py_5PETSc_DMShell; static PyObject *__pyx_tp_new_8petsc4py_5PETSc_DMShell(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_8petsc4py_5PETSc_DMShell *p; PyObject *o = __pyx_tp_new_8petsc4py_5PETSc_DM(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_8petsc4py_5PETSc_DMShell *)o); p->__pyx_base.__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_8petsc4py_5PETSc_Object*)__pyx_vtabptr_8petsc4py_5PETSc_DMShell; return o; } static PyMethodDef __pyx_methods_8petsc4py_5PETSc_DMShell[] = { {"create", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_1create, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_create}, {"setMatrix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_3setMatrix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_2setMatrix}, {"setGlobalVector", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_5setGlobalVector, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_4setGlobalVector}, {"setLocalVector", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_7setLocalVector, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_6setLocalVector}, {"setCreateGlobalVector", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_9setCreateGlobalVector, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_8setCreateGlobalVector}, {"setCreateLocalVector", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_11setCreateLocalVector, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_10setCreateLocalVector}, {"setGlobalToLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_13setGlobalToLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_12setGlobalToLocal}, {"setGlobalToLocalVecScatter", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_15setGlobalToLocalVecScatter, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_14setGlobalToLocalVecScatter}, {"setLocalToGlobal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_17setLocalToGlobal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_16setLocalToGlobal}, {"setLocalToGlobalVecScatter", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_19setLocalToGlobalVecScatter, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_18setLocalToGlobalVecScatter}, {"setLocalToLocal", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_21setLocalToLocal, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_20setLocalToLocal}, {"setLocalToLocalVecScatter", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_23setLocalToLocalVecScatter, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_22setLocalToLocalVecScatter}, {"setCreateMatrix", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_25setCreateMatrix, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_24setCreateMatrix}, {"setCoarsen", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_27setCoarsen, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_26setCoarsen}, {"setRefine", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_29setRefine, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_28setRefine}, {"setCreateInterpolation", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_31setCreateInterpolation, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_30setCreateInterpolation}, {"setCreateInjection", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_33setCreateInjection, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_32setCreateInjection}, {"setCreateFieldDecomposition", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_35setCreateFieldDecomposition, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_34setCreateFieldDecomposition}, {"setCreateSubDM", (PyCFunction)__pyx_pw_8petsc4py_5PETSc_7DMShell_37setCreateSubDM, METH_VARARGS|METH_KEYWORDS, __pyx_doc_8petsc4py_5PETSc_7DMShell_36setCreateSubDM}, {0, 0, 0, 0} }; static PyTypeObject __pyx_type_8petsc4py_5PETSc_DMShell = { PyVarObject_HEAD_INIT(0, 0) "petsc4py.PETSc.DMShell", /*tp_name*/ sizeof(struct __pyx_obj_8petsc4py_5PETSc_DMShell), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_8petsc4py_5PETSc_Object, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ __pyx_tp_traverse_8petsc4py_5PETSc_Object, /*tp_traverse*/ __pyx_tp_clear_8petsc4py_5PETSc_Object, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_8petsc4py_5PETSc_DMShell, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_8petsc4py_5PETSc_DMShell, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 0, /*tp_finalize*/ #endif }; static PyMethodDef __pyx_methods[] = { {0, 0, 0, 0} }; #if PY_MAJOR_VERSION >= 3 static struct PyModuleDef __pyx_moduledef = { #if PY_VERSION_HEX < 0x03020000 { PyObject_HEAD_INIT(NULL) NULL, 0, NULL }, #else PyModuleDef_HEAD_INIT, #endif "PETSc", 0, /* m_doc */ -1, /* m_size */ __pyx_methods /* 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__pyx_v_8petsc4py_5PETSc___COMM_SELF__ = ((struct PyPetscCommObject *)Py_None); Py_INCREF(Py_None); __pyx_v_8petsc4py_5PETSc___COMM_WORLD__ = ((struct PyPetscCommObject *)Py_None); Py_INCREF(Py_None); __pyx_v_8petsc4py_5PETSc_type_registry = ((PyObject*)Py_None); Py_INCREF(Py_None); __pyx_v_8petsc4py_5PETSc_tracebacklist = Py_None; Py_INCREF(Py_None); /*--- Variable export code ---*/ /*--- Function export code ---*/ if (__Pyx_ExportFunction("GetComm", (void (*)(void))__pyx_f_8petsc4py_5PETSc_GetComm, "MPI_Comm (PyObject *, MPI_Comm)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("GetCommDefault", (void (*)(void))__pyx_f_8petsc4py_5PETSc_GetCommDefault, "MPI_Comm (void)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscType_Register", (void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscType_Register, "int (int, PyTypeObject *)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscType_Lookup", (void 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(void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscSNES_New, "PyObject *(SNES)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscSNES_Get", (void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscSNES_Get, "SNES (PyObject *)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscTS_New", (void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscTS_New, "PyObject *(TS)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscTS_Get", (void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscTS_Get, "TS (PyObject *)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscTAO_New", (void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscTAO_New, "PyObject *(Tao)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscTAO_Get", (void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscTAO_Get, "Tao (PyObject *)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscAO_New", (void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscAO_New, "PyObject *(AO)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscAO_Get", (void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscAO_Get, "AO (PyObject *)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscDM_New", (void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscDM_New, "PyObject *(DM)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscDM_Get", (void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscDM_Get, "DM (PyObject *)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscPartitioner_New", (void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscPartitioner_New, "PyObject *(PetscPartitioner)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) if (__Pyx_ExportFunction("PyPetscPartitioner_Get", (void (*)(void))__pyx_f_8petsc4py_5PETSc_PyPetscPartitioner_Get, "PetscPartitioner (PyObject *)") < 0) __PYX_ERR(48, 1, __pyx_L1_error) /*--- Type init code ---*/ if (PyType_Ready(&PyPetscComm_Type) < 0) __PYX_ERR(9, 3, __pyx_L1_error) PyPetscComm_Type.tp_print = 0; if (PyObject_SetAttrString(__pyx_m, "Comm", (PyObject *)&PyPetscComm_Type) < 0) __PYX_ERR(9, 3, __pyx_L1_error) __pyx_ptype_8petsc4py_5PETSc_Comm = &PyPetscComm_Type; __pyx_vtabptr_8petsc4py_5PETSc_Object = &__pyx_vtable_8petsc4py_5PETSc_Object; __pyx_vtable_8petsc4py_5PETSc_Object.get_attr = (PyObject *(*)(struct PyPetscObjectObject *, char *))__pyx_f_8petsc4py_5PETSc_6Object_get_attr; __pyx_vtable_8petsc4py_5PETSc_Object.set_attr = (PyObject *(*)(struct PyPetscObjectObject *, char *, PyObject *))__pyx_f_8petsc4py_5PETSc_6Object_set_attr; __pyx_vtable_8petsc4py_5PETSc_Object.get_dict = (PyObject *(*)(struct PyPetscObjectObject *))__pyx_f_8petsc4py_5PETSc_6Object_get_dict; if (PyType_Ready(&PyPetscObject_Type) < 0) __PYX_ERR(10, 3, __pyx_L1_error) PyPetscObject_Type.tp_print = 0; if (__Pyx_SetVtable(PyPetscObject_Type.tp_dict, __pyx_vtabptr_8petsc4py_5PETSc_Object) < 0) __PYX_ERR(10, 3, __pyx_L1_error) if (PyObject_SetAttrString(__pyx_m, "Object", (PyObject *)&PyPetscObject_Type) < 0) __PYX_ERR(10, 3, __pyx_L1_error) if (PyPetscObject_Type.tp_weaklistoffset == 0) PyPetscObject_Type.tp_weaklistoffset = offsetof(struct PyPetscObjectObject, __weakref__); __pyx_ptype_8petsc4py_5PETSc_Object = &PyPetscObject_Type; __pyx_vtabptr_8petsc4py_5PETSc_Viewer = &__pyx_vtable_8petsc4py_5PETSc_Viewer; __pyx_vtable_8petsc4py_5PETSc_Viewer.__pyx_base = *__pyx_vtabptr_8petsc4py_5PETSc_Object; PyPetscViewer_Type.tp_base = __pyx_ptype_8petsc4py_5PETSc_Object; if (PyType_Ready(&PyPetscViewer_Type) < 0) __PYX_ERR(27, 74, __pyx_L1_error) PyPetscViewer_Type.tp_print = 0; if (__Pyx_SetVtable(PyPetscViewer_Type.tp_dict, __pyx_vtabptr_8petsc4py_5PETSc_Viewer) < 0) __PYX_ERR(27, 74, __pyx_L1_error) if (PyObject_SetAttrString(__pyx_m, "Viewer", (PyObject *)&PyPetscViewer_Type) < 0) __PYX_ERR(27, 74, __pyx_L1_error) if (PyPetscViewer_Type.tp_weaklistoffset == 0) PyPetscViewer_Type.tp_weaklistoffset = offsetof(struct PyPetscViewerObject, __pyx_base.__weakref__); __pyx_ptype_8petsc4py_5PETSc_Viewer = &PyPetscViewer_Type; __pyx_vtabptr_8petsc4py_5PETSc_Random = &__pyx_vtable_8petsc4py_5PETSc_Random; __pyx_vtable_8petsc4py_5PETSc_Random.__pyx_base = *__pyx_vtabptr_8petsc4py_5PETSc_Object; PyPetscRandom_Type.tp_base = __pyx_ptype_8petsc4py_5PETSc_Object; if (PyType_Ready(&PyPetscRandom_Type) < 0) __PYX_ERR(28, 11, __pyx_L1_error) PyPetscRandom_Type.tp_print = 0; if (__Pyx_SetVtable(PyPetscRandom_Type.tp_dict, __pyx_vtabptr_8petsc4py_5PETSc_Random) < 0) __PYX_ERR(28, 11, __pyx_L1_error) if (PyObject_SetAttrString(__pyx_m, "Random", (PyObject *)&PyPetscRandom_Type) < 0) __PYX_ERR(28, 11, __pyx_L1_error) if (PyPetscRandom_Type.tp_weaklistoffset == 0) PyPetscRandom_Type.tp_weaklistoffset = offsetof(struct PyPetscRandomObject, __pyx_base.__weakref__); __pyx_ptype_8petsc4py_5PETSc_Random = &PyPetscRandom_Type; __pyx_vtabptr_8petsc4py_5PETSc_IS = &__pyx_vtable_8petsc4py_5PETSc_IS; __pyx_vtable_8petsc4py_5PETSc_IS.__pyx_base = *__pyx_vtabptr_8petsc4py_5PETSc_Object; PyPetscIS_Type.tp_base = __pyx_ptype_8petsc4py_5PETSc_Object; if (PyType_Ready(&PyPetscIS_Type) < 0) __PYX_ERR(29, 10, __pyx_L1_error) PyPetscIS_Type.tp_print = 0; if (__Pyx_SetVtable(PyPetscIS_Type.tp_dict, __pyx_vtabptr_8petsc4py_5PETSc_IS) < 0) __PYX_ERR(29, 10, __pyx_L1_error) if (PyObject_SetAttrString(__pyx_m, "IS", (PyObject *)&PyPetscIS_Type) < 0) __PYX_ERR(29, 10, __pyx_L1_error) if (PyPetscIS_Type.tp_weaklistoffset == 0) PyPetscIS_Type.tp_weaklistoffset = offsetof(struct PyPetscISObject, __pyx_base.__weakref__); __pyx_ptype_8petsc4py_5PETSc_IS = &PyPetscIS_Type; __pyx_vtabptr_8petsc4py_5PETSc_LGMap = &__pyx_vtable_8petsc4py_5PETSc_LGMap; __pyx_vtable_8petsc4py_5PETSc_LGMap.__pyx_base = *__pyx_vtabptr_8petsc4py_5PETSc_Object; PyPetscLGMap_Type.tp_base = __pyx_ptype_8petsc4py_5PETSc_Object; if (PyType_Ready(&PyPetscLGMap_Type) < 0) __PYX_ERR(29, 350, __pyx_L1_error) PyPetscLGMap_Type.tp_print = 0; if (__Pyx_SetVtable(PyPetscLGMap_Type.tp_dict, __pyx_vtabptr_8petsc4py_5PETSc_LGMap) < 0) __PYX_ERR(29, 350, __pyx_L1_error) if (PyObject_SetAttrString(__pyx_m, "LGMap", (PyObject *)&PyPetscLGMap_Type) < 0) __PYX_ERR(29, 350, __pyx_L1_error) if (PyPetscLGMap_Type.tp_weaklistoffset == 0) PyPetscLGMap_Type.tp_weaklistoffset = offsetof(struct PyPetscLGMapObject, __pyx_base.__weakref__); __pyx_ptype_8petsc4py_5PETSc_LGMap = &PyPetscLGMap_Type; __pyx_vtabptr_8petsc4py_5PETSc_SF = &__pyx_vtable_8petsc4py_5PETSc_SF; __pyx_vtable_8petsc4py_5PETSc_SF.__pyx_base = *__pyx_vtabptr_8petsc4py_5PETSc_Object; PyPetscSF_Type.tp_base = __pyx_ptype_8petsc4py_5PETSc_Object; if (PyType_Ready(&PyPetscSF_Type) < 0) __PYX_ERR(45, 9, __pyx_L1_error) PyPetscSF_Type.tp_print = 0; if (__Pyx_SetVtable(PyPetscSF_Type.tp_dict, __pyx_vtabptr_8petsc4py_5PETSc_SF) < 0) __PYX_ERR(45, 9, __pyx_L1_error) if (PyObject_SetAttrString(__pyx_m, "SF", (PyObject *)&PyPetscSF_Type) < 0) __PYX_ERR(45, 9, __pyx_L1_error) if (PyPetscSF_Type.tp_weaklistoffset == 0) PyPetscSF_Type.tp_weaklistoffset = offsetof(struct PyPetscSFObject, __pyx_base.__weakref__); __pyx_ptype_8petsc4py_5PETSc_SF = &PyPetscSF_Type; __pyx_vtabptr_8petsc4py_5PETSc_Vec = &__pyx_vtable_8petsc4py_5PETSc_Vec; __pyx_vtable_8petsc4py_5PETSc_Vec.__pyx_base = *__pyx_vtabptr_8petsc4py_5PETSc_Object; PyPetscVec_Type.tp_base = __pyx_ptype_8petsc4py_5PETSc_Object; if (PyType_Ready(&PyPetscVec_Type) < 0) __PYX_ERR(30, 25, __pyx_L1_error) PyPetscVec_Type.tp_print = 0; if (__Pyx_SetVtable(PyPetscVec_Type.tp_dict, __pyx_vtabptr_8petsc4py_5PETSc_Vec) < 0) __PYX_ERR(30, 25, __pyx_L1_error) if (PyObject_SetAttrString(__pyx_m, "Vec", (PyObject *)&PyPetscVec_Type) < 0) __PYX_ERR(30, 25, __pyx_L1_error) if (PyPetscVec_Type.tp_weaklistoffset == 0) PyPetscVec_Type.tp_weaklistoffset = offsetof(struct PyPetscVecObject, __pyx_base.__weakref__); __pyx_ptype_8petsc4py_5PETSc_Vec = &PyPetscVec_Type; __pyx_vtabptr_8petsc4py_5PETSc_Scatter = &__pyx_vtable_8petsc4py_5PETSc_Scatter; __pyx_vtable_8petsc4py_5PETSc_Scatter.__pyx_base = *__pyx_vtabptr_8petsc4py_5PETSc_Object; PyPetscScatter_Type.tp_base = __pyx_ptype_8petsc4py_5PETSc_Object; if (PyType_Ready(&PyPetscScatter_Type) < 0) __PYX_ERR(31, 3, __pyx_L1_error) PyPetscScatter_Type.tp_print = 0; if (__Pyx_SetVtable(PyPetscScatter_Type.tp_dict, __pyx_vtabptr_8petsc4py_5PETSc_Scatter) < 0) __PYX_ERR(31, 3, __pyx_L1_error) if (PyObject_SetAttrString(__pyx_m, "Scatter", (PyObject *)&PyPetscScatter_Type) < 0) __PYX_ERR(31, 3, __pyx_L1_error) if (PyPetscScatter_Type.tp_weaklistoffset == 0) PyPetscScatter_Type.tp_weaklistoffset = offsetof(struct PyPetscScatterObject, __pyx_base.__weakref__); __pyx_ptype_8petsc4py_5PETSc_Scatter = &PyPetscScatter_Type; __pyx_vtabptr_8petsc4py_5PETSc_Section = &__pyx_vtable_8petsc4py_5PETSc_Section; __pyx_vtable_8petsc4py_5PETSc_Section.__pyx_base = *__pyx_vtabptr_8petsc4py_5PETSc_Object; PyPetscSection_Type.tp_base = 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(result == 0) : (result != 0); } } else if ((s1 == Py_None) & PyBytes_CheckExact(s2)) { return (equals == Py_NE); } else if ((s2 == Py_None) & PyBytes_CheckExact(s1)) { return (equals == Py_NE); } else { int result; PyObject* py_result = PyObject_RichCompare(s1, s2, equals); if (!py_result) return -1; result = __Pyx_PyObject_IsTrue(py_result); Py_DECREF(py_result); return result; } #endif } /* UnicodeEquals */ static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { #if CYTHON_COMPILING_IN_PYPY return PyObject_RichCompareBool(s1, s2, equals); #else #if PY_MAJOR_VERSION < 3 PyObject* owned_ref = NULL; #endif int s1_is_unicode, s2_is_unicode; if (s1 == s2) { goto return_eq; } s1_is_unicode = PyUnicode_CheckExact(s1); s2_is_unicode = PyUnicode_CheckExact(s2); #if PY_MAJOR_VERSION < 3 if ((s1_is_unicode & (!s2_is_unicode)) && PyString_CheckExact(s2)) { owned_ref = PyUnicode_FromObject(s2); if (unlikely(!owned_ref)) return -1; s2 = owned_ref; s2_is_unicode = 1; } else if ((s2_is_unicode & (!s1_is_unicode)) && PyString_CheckExact(s1)) { owned_ref = PyUnicode_FromObject(s1); if (unlikely(!owned_ref)) return -1; s1 = owned_ref; s1_is_unicode = 1; } else if (((!s2_is_unicode) & (!s1_is_unicode))) { return __Pyx_PyBytes_Equals(s1, s2, equals); } #endif if (s1_is_unicode & s2_is_unicode) { Py_ssize_t length; int kind; void *data1, *data2; if (unlikely(__Pyx_PyUnicode_READY(s1) < 0) || unlikely(__Pyx_PyUnicode_READY(s2) < 0)) return -1; length = __Pyx_PyUnicode_GET_LENGTH(s1); if (length != __Pyx_PyUnicode_GET_LENGTH(s2)) { goto return_ne; } kind = __Pyx_PyUnicode_KIND(s1); if (kind != __Pyx_PyUnicode_KIND(s2)) { goto return_ne; } data1 = __Pyx_PyUnicode_DATA(s1); data2 = __Pyx_PyUnicode_DATA(s2); if (__Pyx_PyUnicode_READ(kind, data1, 0) != __Pyx_PyUnicode_READ(kind, data2, 0)) { goto return_ne; } else if (length == 1) { goto return_eq; } else { int result = memcmp(data1, data2, (size_t)(length * kind)); #if PY_MAJOR_VERSION < 3 Py_XDECREF(owned_ref); #endif return (equals == Py_EQ) ? (result == 0) : (result != 0); } } else if ((s1 == Py_None) & s2_is_unicode) { goto return_ne; } else if ((s2 == Py_None) & s1_is_unicode) { goto return_ne; } else { int result; PyObject* py_result = PyObject_RichCompare(s1, s2, equals); if (!py_result) return -1; result = __Pyx_PyObject_IsTrue(py_result); Py_DECREF(py_result); return result; } return_eq: #if PY_MAJOR_VERSION < 3 Py_XDECREF(owned_ref); #endif return (equals == Py_EQ); return_ne: #if PY_MAJOR_VERSION < 3 Py_XDECREF(owned_ref); #endif return (equals == Py_NE); #endif } /* RaiseException */ #if PY_MAJOR_VERSION < 3 static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, CYTHON_UNUSED PyObject *cause) { __Pyx_PyThreadState_declare Py_XINCREF(type); if (!value || value == Py_None) value = NULL; else Py_INCREF(value); if (!tb || tb == Py_None) tb = NULL; else { Py_INCREF(tb); if (!PyTraceBack_Check(tb)) { PyErr_SetString(PyExc_TypeError, "raise: arg 3 must be a traceback or None"); goto raise_error; } } if (PyType_Check(type)) { #if CYTHON_COMPILING_IN_PYPY if (!value) { Py_INCREF(Py_None); value = Py_None; } #endif PyErr_NormalizeException(&type, &value, &tb); } else { if (value) { PyErr_SetString(PyExc_TypeError, "instance exception may not have a separate value"); goto raise_error; } value = type; type = (PyObject*) Py_TYPE(type); Py_INCREF(type); if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) { PyErr_SetString(PyExc_TypeError, "raise: exception class must be a subclass of BaseException"); goto raise_error; } } __Pyx_PyThreadState_assign __Pyx_ErrRestore(type, value, tb); return; raise_error: Py_XDECREF(value); Py_XDECREF(type); Py_XDECREF(tb); return; } #else static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) { PyObject* owned_instance = NULL; if (tb == Py_None) { tb = 0; } else if (tb && !PyTraceBack_Check(tb)) { PyErr_SetString(PyExc_TypeError, "raise: arg 3 must be a traceback or None"); goto bad; } if (value == Py_None) value = 0; if (PyExceptionInstance_Check(type)) { if (value) { PyErr_SetString(PyExc_TypeError, "instance exception may not have a separate value"); goto bad; } value = type; type = (PyObject*) Py_TYPE(value); } else if (PyExceptionClass_Check(type)) { PyObject *instance_class = NULL; if (value && PyExceptionInstance_Check(value)) { instance_class = (PyObject*) Py_TYPE(value); if (instance_class != type) { int is_subclass = PyObject_IsSubclass(instance_class, type); if (!is_subclass) { instance_class = NULL; } else if (unlikely(is_subclass == -1)) { goto bad; } else { type = instance_class; } } } if (!instance_class) { PyObject *args; if (!value) args = PyTuple_New(0); else if (PyTuple_Check(value)) { Py_INCREF(value); args = value; } else args = PyTuple_Pack(1, value); if (!args) goto bad; owned_instance = PyObject_Call(type, args, NULL); Py_DECREF(args); if (!owned_instance) goto bad; value = owned_instance; if (!PyExceptionInstance_Check(value)) { PyErr_Format(PyExc_TypeError, "calling %R should have returned an instance of " "BaseException, not %R", type, Py_TYPE(value)); goto bad; } } } else { PyErr_SetString(PyExc_TypeError, "raise: exception class must be a subclass of BaseException"); goto bad; } #if PY_VERSION_HEX >= 0x03030000 if (cause) { #else if (cause && cause != Py_None) { #endif PyObject *fixed_cause; if (cause == Py_None) { fixed_cause = NULL; } else if (PyExceptionClass_Check(cause)) { fixed_cause = PyObject_CallObject(cause, NULL); if (fixed_cause == NULL) goto bad; } else if (PyExceptionInstance_Check(cause)) { fixed_cause = cause; Py_INCREF(fixed_cause); } else { PyErr_SetString(PyExc_TypeError, "exception causes must derive from " "BaseException"); goto bad; } PyException_SetCause(value, fixed_cause); } PyErr_SetObject(type, value); if (tb) { #if CYTHON_COMPILING_IN_PYPY PyObject *tmp_type, *tmp_value, *tmp_tb; PyErr_Fetch(&tmp_type, &tmp_value, &tmp_tb); Py_INCREF(tb); PyErr_Restore(tmp_type, tmp_value, tb); Py_XDECREF(tmp_tb); #else PyThreadState *tstate = PyThreadState_GET(); PyObject* tmp_tb = tstate->curexc_traceback; if (tb != tmp_tb) { Py_INCREF(tb); tstate->curexc_traceback = tb; Py_XDECREF(tmp_tb); } #endif } bad: Py_XDECREF(owned_instance); return; } #endif /* GetException */ #if CYTHON_COMPILING_IN_CPYTHON static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { #else static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) { #endif PyObject *local_type, *local_value, *local_tb; #if CYTHON_COMPILING_IN_CPYTHON PyObject *tmp_type, *tmp_value, *tmp_tb; local_type = tstate->curexc_type; local_value = tstate->curexc_value; local_tb = tstate->curexc_traceback; tstate->curexc_type = 0; tstate->curexc_value = 0; tstate->curexc_traceback = 0; #else PyErr_Fetch(&local_type, &local_value, &local_tb); #endif PyErr_NormalizeException(&local_type, &local_value, &local_tb); #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(tstate->curexc_type)) #else if (unlikely(PyErr_Occurred())) #endif goto bad; #if PY_MAJOR_VERSION >= 3 if (local_tb) { if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0)) goto bad; } #endif Py_XINCREF(local_tb); Py_XINCREF(local_type); Py_XINCREF(local_value); *type = local_type; *value = local_value; *tb = local_tb; #if CYTHON_COMPILING_IN_CPYTHON tmp_type = tstate->exc_type; tmp_value = tstate->exc_value; tmp_tb = tstate->exc_traceback; tstate->exc_type = local_type; tstate->exc_value = local_value; tstate->exc_traceback = local_tb; Py_XDECREF(tmp_type); Py_XDECREF(tmp_value); Py_XDECREF(tmp_tb); #else PyErr_SetExcInfo(local_type, local_value, local_tb); #endif return 0; bad: *type = 0; *value = 0; *tb = 0; Py_XDECREF(local_type); Py_XDECREF(local_value); Py_XDECREF(local_tb); return -1; } /* SwapException */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE void __Pyx__ExceptionSwap(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; tmp_type = tstate->exc_type; tmp_value = tstate->exc_value; tmp_tb = tstate->exc_traceback; tstate->exc_type = *type; tstate->exc_value = *value; tstate->exc_traceback = *tb; *type = tmp_type; *value = tmp_value; *tb = tmp_tb; } #else static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; PyErr_GetExcInfo(&tmp_type, &tmp_value, &tmp_tb); PyErr_SetExcInfo(*type, *value, *tb); *type = tmp_type; *value = tmp_value; *tb = tmp_tb; } #endif /* SaveResetException */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { *type = tstate->exc_type; *value = tstate->exc_value; *tb = tstate->exc_traceback; Py_XINCREF(*type); Py_XINCREF(*value); Py_XINCREF(*tb); } static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; tmp_type = tstate->exc_type; tmp_value = tstate->exc_value; tmp_tb = tstate->exc_traceback; tstate->exc_type = type; tstate->exc_value = value; tstate->exc_traceback = tb; Py_XDECREF(tmp_type); Py_XDECREF(tmp_value); Py_XDECREF(tmp_tb); } #endif /* PyObjectCallMethod1 */ static PyObject* __Pyx_PyObject_CallMethod1(PyObject* obj, PyObject* method_name, PyObject* arg) { PyObject *method, *result = NULL; method = __Pyx_PyObject_GetAttrStr(obj, method_name); if (unlikely(!method)) goto bad; #if CYTHON_COMPILING_IN_CPYTHON if (likely(PyMethod_Check(method))) { PyObject *self = PyMethod_GET_SELF(method); if (likely(self)) { PyObject *args; PyObject *function = PyMethod_GET_FUNCTION(method); args = PyTuple_New(2); if (unlikely(!args)) goto bad; Py_INCREF(self); PyTuple_SET_ITEM(args, 0, self); Py_INCREF(arg); PyTuple_SET_ITEM(args, 1, arg); Py_INCREF(function); Py_DECREF(method); method = NULL; result = __Pyx_PyObject_Call(function, args, NULL); Py_DECREF(args); Py_DECREF(function); return result; } } #endif result = __Pyx_PyObject_CallOneArg(method, arg); bad: Py_XDECREF(method); return result; } /* pop_index */ static PyObject* __Pyx__PyObject_PopNewIndex(PyObject* L, PyObject* py_ix) { PyObject *r; if (unlikely(!py_ix)) return NULL; r = __Pyx__PyObject_PopIndex(L, py_ix); Py_DECREF(py_ix); return r; } static PyObject* __Pyx__PyObject_PopIndex(PyObject* L, PyObject* py_ix) { return __Pyx_PyObject_CallMethod1(L, __pyx_n_s_pop, py_ix); } #if CYTHON_COMPILING_IN_CPYTHON static PyObject* __Pyx__PyList_PopIndex(PyObject* L, PyObject* py_ix, Py_ssize_t ix) { Py_ssize_t size = PyList_GET_SIZE(L); if (likely(size > (((PyListObject*)L)->allocated >> 1))) { Py_ssize_t cix = ix; if (cix < 0) { cix += size; } if (likely(0 <= cix && cix < size)) { PyObject* v = PyList_GET_ITEM(L, cix); Py_SIZE(L) -= 1; size -= 1; memmove(&PyList_GET_ITEM(L, cix), &PyList_GET_ITEM(L, cix+1), (size_t)(size-cix)*sizeof(PyObject*)); return v; } } if (py_ix == Py_None) { return __Pyx__PyObject_PopNewIndex(L, PyInt_FromSsize_t(ix)); } else { return __Pyx__PyObject_PopIndex(L, py_ix); } } #endif /* SliceObject */ static CYTHON_INLINE PyObject* __Pyx_PyObject_GetSlice(PyObject* obj, Py_ssize_t cstart, Py_ssize_t cstop, PyObject** _py_start, PyObject** _py_stop, PyObject** _py_slice, int has_cstart, int has_cstop, CYTHON_UNUSED int wraparound) { #if CYTHON_COMPILING_IN_CPYTHON PyMappingMethods* mp; #if PY_MAJOR_VERSION < 3 PySequenceMethods* ms = Py_TYPE(obj)->tp_as_sequence; if (likely(ms && ms->sq_slice)) { if (!has_cstart) { if (_py_start && (*_py_start != Py_None)) { cstart = __Pyx_PyIndex_AsSsize_t(*_py_start); if ((cstart == (Py_ssize_t)-1) && PyErr_Occurred()) goto bad; } else cstart = 0; } if (!has_cstop) { if (_py_stop && (*_py_stop != Py_None)) { cstop = __Pyx_PyIndex_AsSsize_t(*_py_stop); if ((cstop == (Py_ssize_t)-1) && PyErr_Occurred()) goto bad; } else cstop = PY_SSIZE_T_MAX; } if (wraparound && unlikely((cstart < 0) | (cstop < 0)) && likely(ms->sq_length)) { Py_ssize_t l = ms->sq_length(obj); if (likely(l >= 0)) { if (cstop < 0) { cstop += l; if (cstop < 0) cstop = 0; } if (cstart < 0) { cstart += l; if (cstart < 0) cstart = 0; } } else { if (!PyErr_ExceptionMatches(PyExc_OverflowError)) goto bad; PyErr_Clear(); } } return ms->sq_slice(obj, cstart, cstop); } #endif mp = Py_TYPE(obj)->tp_as_mapping; if (likely(mp && mp->mp_subscript)) #endif { PyObject* result; PyObject *py_slice, *py_start, *py_stop; if (_py_slice) { py_slice = *_py_slice; } else { PyObject* owned_start = NULL; PyObject* owned_stop = NULL; if (_py_start) { py_start = *_py_start; } else { if (has_cstart) { owned_start = py_start = PyInt_FromSsize_t(cstart); if (unlikely(!py_start)) goto bad; } else py_start = Py_None; } if (_py_stop) { py_stop = *_py_stop; } else { if (has_cstop) { owned_stop = py_stop = PyInt_FromSsize_t(cstop); if (unlikely(!py_stop)) { Py_XDECREF(owned_start); goto bad; } } else py_stop = Py_None; } py_slice = PySlice_New(py_start, py_stop, Py_None); Py_XDECREF(owned_start); Py_XDECREF(owned_stop); if (unlikely(!py_slice)) goto bad; } #if CYTHON_COMPILING_IN_CPYTHON result = mp->mp_subscript(obj, py_slice); #else result = PyObject_GetItem(obj, py_slice); #endif if (!_py_slice) { Py_DECREF(py_slice); } return result; } PyErr_Format(PyExc_TypeError, "'%.200s' object is unsliceable", Py_TYPE(obj)->tp_name); bad: return NULL; } /* GetItemInt */ static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j) { PyObject *r; if (!j) return NULL; r = PyObject_GetItem(o, j); Py_DECREF(j); return r; } static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, CYTHON_NCP_UNUSED int wraparound, CYTHON_NCP_UNUSED int boundscheck) { #if CYTHON_COMPILING_IN_CPYTHON if (wraparound & unlikely(i < 0)) i += PyList_GET_SIZE(o); if ((!boundscheck) || likely((0 <= i) & (i < PyList_GET_SIZE(o)))) { PyObject *r = PyList_GET_ITEM(o, i); Py_INCREF(r); return r; } return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); #else return PySequence_GetItem(o, i); #endif } static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, CYTHON_NCP_UNUSED int wraparound, CYTHON_NCP_UNUSED int boundscheck) { #if CYTHON_COMPILING_IN_CPYTHON if (wraparound & unlikely(i < 0)) i += PyTuple_GET_SIZE(o); if ((!boundscheck) || likely((0 <= i) & (i < PyTuple_GET_SIZE(o)))) { PyObject *r = PyTuple_GET_ITEM(o, i); Py_INCREF(r); return r; } return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); #else return PySequence_GetItem(o, i); #endif } static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, int is_list, CYTHON_NCP_UNUSED int wraparound, CYTHON_NCP_UNUSED int boundscheck) { #if CYTHON_COMPILING_IN_CPYTHON if (is_list || PyList_CheckExact(o)) { Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyList_GET_SIZE(o); if ((!boundscheck) || (likely((n >= 0) & (n < PyList_GET_SIZE(o))))) { PyObject *r = PyList_GET_ITEM(o, n); Py_INCREF(r); return r; } } else if (PyTuple_CheckExact(o)) { Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyTuple_GET_SIZE(o); if ((!boundscheck) || likely((n >= 0) & (n < PyTuple_GET_SIZE(o)))) { PyObject *r = PyTuple_GET_ITEM(o, n); Py_INCREF(r); return r; } } else { PySequenceMethods *m = Py_TYPE(o)->tp_as_sequence; if (likely(m && m->sq_item)) { if (wraparound && unlikely(i < 0) && likely(m->sq_length)) { Py_ssize_t l = m->sq_length(o); if (likely(l >= 0)) { i += l; } else { if (!PyErr_ExceptionMatches(PyExc_OverflowError)) return NULL; PyErr_Clear(); } } return m->sq_item(o, i); } } #else if (is_list || PySequence_Check(o)) { return PySequence_GetItem(o, i); } #endif return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); } /* Import */ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { PyObject *empty_list = 0; PyObject *module = 0; PyObject *global_dict = 0; PyObject *empty_dict = 0; PyObject *list; #if PY_VERSION_HEX < 0x03030000 PyObject *py_import; py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import); if (!py_import) goto bad; #endif if (from_list) list = from_list; else { empty_list = PyList_New(0); if (!empty_list) goto bad; list = empty_list; } global_dict = PyModule_GetDict(__pyx_m); if (!global_dict) goto bad; empty_dict = PyDict_New(); if (!empty_dict) goto bad; { #if PY_MAJOR_VERSION >= 3 if (level == -1) { if (strchr(__Pyx_MODULE_NAME, '.')) { #if PY_VERSION_HEX < 0x03030000 PyObject *py_level = PyInt_FromLong(1); if (!py_level) goto bad; module = PyObject_CallFunctionObjArgs(py_import, name, global_dict, empty_dict, list, py_level, NULL); Py_DECREF(py_level); #else module = PyImport_ImportModuleLevelObject( name, global_dict, empty_dict, list, 1); #endif if (!module) { if (!PyErr_ExceptionMatches(PyExc_ImportError)) goto bad; PyErr_Clear(); } } level = 0; } #endif if (!module) { #if PY_VERSION_HEX < 0x03030000 PyObject *py_level = PyInt_FromLong(level); if (!py_level) goto bad; module = PyObject_CallFunctionObjArgs(py_import, name, global_dict, empty_dict, list, py_level, NULL); Py_DECREF(py_level); #else module = PyImport_ImportModuleLevelObject( name, global_dict, empty_dict, list, level); #endif } } bad: #if PY_VERSION_HEX < 0x03030000 Py_XDECREF(py_import); #endif Py_XDECREF(empty_list); Py_XDECREF(empty_dict); return module; } /* ImportFrom */ static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name) { PyObject* value = __Pyx_PyObject_GetAttrStr(module, name); if (unlikely(!value) && PyErr_ExceptionMatches(PyExc_AttributeError)) { PyErr_Format(PyExc_ImportError, #if PY_MAJOR_VERSION < 3 "cannot import name %.230s", PyString_AS_STRING(name)); #else "cannot import name %S", name); #endif } return value; } /* ExtTypeTest */ static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; } if (likely(PyObject_TypeCheck(obj, type))) return 1; PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s", Py_TYPE(obj)->tp_name, type->tp_name); return 0; } /* RaiseTooManyValuesToUnpack */ static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { PyErr_Format(PyExc_ValueError, "too many values to unpack (expected %" CYTHON_FORMAT_SSIZE_T "d)", expected); } /* RaiseNeedMoreValuesToUnpack */ static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { PyErr_Format(PyExc_ValueError, "need more than %" CYTHON_FORMAT_SSIZE_T "d value%.1s to unpack", index, (index == 1) ? "" : "s"); } /* IterFinish */ static CYTHON_INLINE int __Pyx_IterFinish(void) { #if CYTHON_COMPILING_IN_CPYTHON PyThreadState *tstate = PyThreadState_GET(); PyObject* exc_type = tstate->curexc_type; if (unlikely(exc_type)) { if (likely(exc_type == PyExc_StopIteration) || PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration)) { PyObject *exc_value, *exc_tb; exc_value = tstate->curexc_value; exc_tb = tstate->curexc_traceback; tstate->curexc_type = 0; tstate->curexc_value = 0; tstate->curexc_traceback = 0; Py_DECREF(exc_type); Py_XDECREF(exc_value); Py_XDECREF(exc_tb); return 0; } else { return -1; } } return 0; #else if (unlikely(PyErr_Occurred())) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) { PyErr_Clear(); return 0; } else { return -1; } } return 0; #endif } /* UnpackItemEndCheck */ static int __Pyx_IternextUnpackEndCheck(PyObject *retval, Py_ssize_t expected) { if (unlikely(retval)) { Py_DECREF(retval); __Pyx_RaiseTooManyValuesError(expected); return -1; } else { return __Pyx_IterFinish(); } return 0; } /* PyErrExceptionMatches */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err) { PyObject *exc_type = tstate->curexc_type; if (exc_type == err) return 1; if (unlikely(!exc_type)) return 0; return PyErr_GivenExceptionMatches(exc_type, err); } #endif /* RaiseDoubleKeywords */ static void __Pyx_RaiseDoubleKeywordsError( const char* func_name, PyObject* kw_name) { PyErr_Format(PyExc_TypeError, #if PY_MAJOR_VERSION >= 3 "%s() got multiple values for keyword argument '%U'", func_name, kw_name); #else "%s() got multiple values for keyword argument '%s'", func_name, PyString_AsString(kw_name)); #endif } /* ParseKeywords */ static int __Pyx_ParseOptionalKeywords( PyObject *kwds, PyObject **argnames[], PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args, const char* function_name) { PyObject *key = 0, *value = 0; Py_ssize_t pos = 0; PyObject*** name; PyObject*** first_kw_arg = argnames + num_pos_args; while (PyDict_Next(kwds, &pos, &key, &value)) { name = first_kw_arg; while (*name && (**name != key)) name++; if (*name) { values[name-argnames] = value; continue; } name = first_kw_arg; #if PY_MAJOR_VERSION < 3 if (likely(PyString_CheckExact(key)) || likely(PyString_Check(key))) { while (*name) { if ((CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**name) == PyString_GET_SIZE(key)) && _PyString_Eq(**name, key)) { values[name-argnames] = value; break; } name++; } if (*name) continue; else { PyObject*** argname = argnames; while (argname != first_kw_arg) { if ((**argname == key) || ( (CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**argname) == PyString_GET_SIZE(key)) && _PyString_Eq(**argname, key))) { goto arg_passed_twice; } argname++; } } } else #endif if (likely(PyUnicode_Check(key))) { while (*name) { int cmp = (**name == key) ? 0 : #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3 (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : #endif PyUnicode_Compare(**name, key); if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad; if (cmp == 0) { values[name-argnames] = value; break; } name++; } if (*name) continue; else { PyObject*** argname = argnames; while (argname != first_kw_arg) { int cmp = (**argname == key) ? 0 : #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3 (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : #endif PyUnicode_Compare(**argname, key); if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad; if (cmp == 0) goto arg_passed_twice; argname++; } } } else goto invalid_keyword_type; if (kwds2) { if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad; } else { goto invalid_keyword; } } return 0; arg_passed_twice: __Pyx_RaiseDoubleKeywordsError(function_name, key); goto bad; invalid_keyword_type: PyErr_Format(PyExc_TypeError, "%.200s() keywords must be strings", function_name); goto bad; invalid_keyword: PyErr_Format(PyExc_TypeError, #if PY_MAJOR_VERSION < 3 "%.200s() got an unexpected keyword argument '%.200s'", function_name, PyString_AsString(key)); #else "%s() got an unexpected keyword argument '%U'", function_name, key); #endif bad: return -1; } /* RaiseArgTupleInvalid */ static void __Pyx_RaiseArgtupleInvalid( const char* func_name, int exact, Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found) { Py_ssize_t num_expected; const char *more_or_less; if (num_found < num_min) { num_expected = num_min; more_or_less = "at least"; } else { num_expected = num_max; more_or_less = "at most"; } if (exact) { more_or_less = "exactly"; } PyErr_Format(PyExc_TypeError, "%.200s() takes %.8s %" CYTHON_FORMAT_SSIZE_T "d positional argument%.1s (%" CYTHON_FORMAT_SSIZE_T "d given)", func_name, more_or_less, num_expected, (num_expected == 1) ? "" : "s", num_found); } /* ArgTypeTest */ static void __Pyx_RaiseArgumentTypeInvalid(const char* name, PyObject *obj, PyTypeObject *type) { PyErr_Format(PyExc_TypeError, "Argument '%.200s' has incorrect type (expected %.200s, got %.200s)", name, type->tp_name, Py_TYPE(obj)->tp_name); } static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, const char *name, int exact) { if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; } if (none_allowed && obj == Py_None) return 1; else if (exact) { if (likely(Py_TYPE(obj) == type)) return 1; #if PY_MAJOR_VERSION == 2 else if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1; #endif } else { if (likely(PyObject_TypeCheck(obj, type))) return 1; } __Pyx_RaiseArgumentTypeInvalid(name, obj, type); return 0; } /* KeywordStringCheck */ static CYTHON_INLINE int __Pyx_CheckKeywordStrings( PyObject *kwdict, const char* function_name, int kw_allowed) { PyObject* key = 0; Py_ssize_t pos = 0; #if CYTHON_COMPILING_IN_PYPY if (!kw_allowed && PyDict_Next(kwdict, &pos, &key, 0)) goto invalid_keyword; return 1; #else while (PyDict_Next(kwdict, &pos, &key, 0)) { #if PY_MAJOR_VERSION < 3 if (unlikely(!PyString_CheckExact(key)) && unlikely(!PyString_Check(key))) #endif if (unlikely(!PyUnicode_Check(key))) goto invalid_keyword_type; } if ((!kw_allowed) && unlikely(key)) goto invalid_keyword; return 1; invalid_keyword_type: PyErr_Format(PyExc_TypeError, "%.200s() keywords must be strings", function_name); return 0; #endif invalid_keyword: PyErr_Format(PyExc_TypeError, #if PY_MAJOR_VERSION < 3 "%.200s() got an unexpected keyword argument '%.200s'", function_name, PyString_AsString(key)); #else "%s() got an unexpected keyword argument '%U'", function_name, key); #endif return 0; } /* UnpackUnboundCMethod */ static int __Pyx_TryUnpackUnboundCMethod(__Pyx_CachedCFunction* target) { PyObject *method; method = __Pyx_PyObject_GetAttrStr(target->type, *target->method_name); if (unlikely(!method)) return -1; target->method = method; #if CYTHON_COMPILING_IN_CPYTHON #if PY_MAJOR_VERSION >= 3 if (likely(PyObject_TypeCheck(method, &PyMethodDescr_Type))) #endif { PyMethodDescrObject *descr = (PyMethodDescrObject*) method; target->func = descr->d_method->ml_meth; target->flag = descr->d_method->ml_flags & (METH_VARARGS | METH_KEYWORDS | METH_O | METH_NOARGS); } #endif return 0; } /* CallUnboundCMethod0 */ static PyObject* __Pyx__CallUnboundCMethod0(__Pyx_CachedCFunction* cfunc, PyObject* self) { PyObject *args, *result = NULL; if (unlikely(!cfunc->method) && unlikely(__Pyx_TryUnpackUnboundCMethod(cfunc) < 0)) return NULL; #if CYTHON_COMPILING_IN_CPYTHON args = PyTuple_New(1); if (unlikely(!args)) goto bad; Py_INCREF(self); PyTuple_SET_ITEM(args, 0, self); #else args = PyTuple_Pack(1, self); if (unlikely(!args)) goto bad; #endif result = __Pyx_PyObject_Call(cfunc->method, args, NULL); Py_DECREF(args); bad: return result; } /* py_dict_keys */ static CYTHON_INLINE PyObject* __Pyx_PyDict_Keys(PyObject* d) { if (PY_MAJOR_VERSION >= 3) return __Pyx_CallUnboundCMethod0(&__pyx_umethod_PyDict_Type_keys, d); else return PyDict_Keys(d); } /* PyIntBinop */ #if CYTHON_COMPILING_IN_CPYTHON static PyObject* __Pyx_PyInt_EqObjC(PyObject *op1, PyObject *op2, CYTHON_UNUSED long intval, CYTHON_UNUSED int inplace) { if (op1 == op2) { Py_RETURN_TRUE; } #if PY_MAJOR_VERSION < 3 if (likely(PyInt_CheckExact(op1))) { const long b = intval; long a = PyInt_AS_LONG(op1); if (a == b) { Py_RETURN_TRUE; } else { Py_RETURN_FALSE; } } #endif #if CYTHON_USE_PYLONG_INTERNALS && PY_MAJOR_VERSION >= 3 if (likely(PyLong_CheckExact(op1))) { const long b = intval; long a; const digit* digits = ((PyLongObject*)op1)->ob_digit; const Py_ssize_t size = Py_SIZE(op1); if (likely(__Pyx_sst_abs(size) <= 1)) { a = likely(size) ? digits[0] : 0; if (size == -1) a = -a; } else { switch (size) { case -2: if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { a = -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; } case 2: if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { a = (long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; } case -3: if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { a = -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; } case 3: if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { a = (long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; } case -4: if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { a = -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; } case 4: if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { a = (long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; } #if PyLong_SHIFT < 30 && PyLong_SHIFT != 15 default: return PyLong_Type.tp_richcompare(op1, op2, Py_EQ); #else default: Py_RETURN_FALSE; #endif } } if (a == b) { Py_RETURN_TRUE; } else { Py_RETURN_FALSE; } } #endif if (PyFloat_CheckExact(op1)) { const long b = intval; double a = PyFloat_AS_DOUBLE(op1); if ((double)a == (double)b) { Py_RETURN_TRUE; } else { Py_RETURN_FALSE; } } return PyObject_RichCompare(op1, op2, Py_EQ); } #endif /* SetItemInt */ static CYTHON_INLINE int __Pyx_SetItemInt_Generic(PyObject *o, PyObject *j, PyObject *v) { int r; if (!j) return -1; r = PyObject_SetItem(o, j, v); Py_DECREF(j); return r; } static CYTHON_INLINE int __Pyx_SetItemInt_Fast(PyObject *o, Py_ssize_t i, PyObject *v, int is_list, CYTHON_NCP_UNUSED int wraparound, CYTHON_NCP_UNUSED int boundscheck) { #if CYTHON_COMPILING_IN_CPYTHON if (is_list || PyList_CheckExact(o)) { Py_ssize_t n = (!wraparound) ? i : ((likely(i >= 0)) ? i : i + PyList_GET_SIZE(o)); if ((!boundscheck) || likely((n >= 0) & (n < PyList_GET_SIZE(o)))) { PyObject* old = PyList_GET_ITEM(o, n); Py_INCREF(v); PyList_SET_ITEM(o, n, v); Py_DECREF(old); return 1; } } else { PySequenceMethods *m = Py_TYPE(o)->tp_as_sequence; if (likely(m && m->sq_ass_item)) { if (wraparound && unlikely(i < 0) && likely(m->sq_length)) { Py_ssize_t l = m->sq_length(o); if (likely(l >= 0)) { i += l; } else { if (!PyErr_ExceptionMatches(PyExc_OverflowError)) return -1; PyErr_Clear(); } } return m->sq_ass_item(o, i, v); } } #else #if CYTHON_COMPILING_IN_PYPY if (is_list || (PySequence_Check(o) && !PyDict_Check(o))) { #else if (is_list || PySequence_Check(o)) { #endif return PySequence_SetItem(o, i, v); } #endif return __Pyx_SetItemInt_Generic(o, PyInt_FromSsize_t(i), v); } /* PyIntBinop */ #if CYTHON_COMPILING_IN_CPYTHON static PyObject* __Pyx_PyInt_AddObjC(PyObject *op1, PyObject *op2, CYTHON_UNUSED long intval, CYTHON_UNUSED int inplace) { #if PY_MAJOR_VERSION < 3 if (likely(PyInt_CheckExact(op1))) { const long b = intval; long x; long a = PyInt_AS_LONG(op1); x = (long)((unsigned long)a + b); if (likely((x^a) >= 0 || (x^b) >= 0)) return PyInt_FromLong(x); return PyLong_Type.tp_as_number->nb_add(op1, op2); } #endif #if CYTHON_USE_PYLONG_INTERNALS && PY_MAJOR_VERSION >= 3 if (likely(PyLong_CheckExact(op1))) { const long b = intval; long a, x; const PY_LONG_LONG llb = intval; PY_LONG_LONG lla, llx; const digit* digits = ((PyLongObject*)op1)->ob_digit; const Py_ssize_t size = Py_SIZE(op1); if (likely(__Pyx_sst_abs(size) <= 1)) { a = likely(size) ? digits[0] : 0; if (size == -1) a = -a; } else { switch (size) { case -2: if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { a = -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; } else if (8 * sizeof(PY_LONG_LONG) - 1 > 2 * PyLong_SHIFT) { lla = -(PY_LONG_LONG) (((((unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; } case 2: if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { a = (long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; } else if (8 * sizeof(PY_LONG_LONG) - 1 > 2 * PyLong_SHIFT) { lla = (PY_LONG_LONG) (((((unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; } case -3: if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { a = -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; } else if (8 * sizeof(PY_LONG_LONG) - 1 > 3 * PyLong_SHIFT) { lla = -(PY_LONG_LONG) (((((((unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; } case 3: if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { a = (long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; } else if (8 * sizeof(PY_LONG_LONG) - 1 > 3 * PyLong_SHIFT) { lla = (PY_LONG_LONG) (((((((unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; } case -4: if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { a = -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; } else if (8 * sizeof(PY_LONG_LONG) - 1 > 4 * PyLong_SHIFT) { lla = -(PY_LONG_LONG) (((((((((unsigned PY_LONG_LONG)digits[3]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; } case 4: if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { a = (long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; } else if (8 * sizeof(PY_LONG_LONG) - 1 > 4 * PyLong_SHIFT) { lla = (PY_LONG_LONG) (((((((((unsigned PY_LONG_LONG)digits[3]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; } default: return PyLong_Type.tp_as_number->nb_add(op1, op2); } } x = a + b; return PyLong_FromLong(x); long_long: llx = lla + llb; return PyLong_FromLongLong(llx); } #endif if (PyFloat_CheckExact(op1)) { const long b = intval; double a = PyFloat_AS_DOUBLE(op1); double result; PyFPE_START_PROTECT("add", return NULL) result = ((double)a) + (double)b; PyFPE_END_PROTECT(result) return PyFloat_FromDouble(result); } return (inplace ? PyNumber_InPlaceAdd : PyNumber_Add)(op1, op2); } #endif /* StringJoin */ #if !CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyBytes_Join(PyObject* sep, PyObject* values) { return PyObject_CallMethodObjArgs(sep, __pyx_n_s_join, values, NULL); } #endif /* append */ static CYTHON_INLINE int __Pyx_PyObject_Append(PyObject* L, PyObject* x) { if (likely(PyList_CheckExact(L))) { if (unlikely(__Pyx_PyList_Append(L, x) < 0)) return -1; } else { PyObject* retval = __Pyx_PyObject_CallMethod1(L, __pyx_n_s_append, x); if (unlikely(!retval)) return -1; Py_DECREF(retval); } return 0; } /* dict_getitem_default */ static PyObject* __Pyx_PyDict_GetItemDefault(PyObject* d, PyObject* key, PyObject* default_value) { PyObject* value; #if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY value = PyDict_GetItemWithError(d, key); if (unlikely(!value)) { if (unlikely(PyErr_Occurred())) return NULL; value = default_value; } Py_INCREF(value); #else if (PyString_CheckExact(key) || PyUnicode_CheckExact(key) || PyInt_CheckExact(key)) { value = PyDict_GetItem(d, key); if (unlikely(!value)) { value = default_value; } Py_INCREF(value); } else { if (default_value == Py_None) default_value = NULL; value = PyObject_CallMethodObjArgs( d, __pyx_n_s_get, key, default_value, NULL); } #endif return value; } /* PyObjectCallMethod0 */ static PyObject* __Pyx_PyObject_CallMethod0(PyObject* obj, PyObject* method_name) { PyObject *method, *result = NULL; method = __Pyx_PyObject_GetAttrStr(obj, method_name); if (unlikely(!method)) goto bad; #if CYTHON_COMPILING_IN_CPYTHON if (likely(PyMethod_Check(method))) { PyObject *self = PyMethod_GET_SELF(method); if (likely(self)) { PyObject *function = PyMethod_GET_FUNCTION(method); result = __Pyx_PyObject_CallOneArg(function, self); Py_DECREF(method); return result; } } #endif result = __Pyx_PyObject_CallNoArg(method); Py_DECREF(method); bad: return result; } /* pop */ static CYTHON_INLINE PyObject* __Pyx__PyObject_Pop(PyObject* L) { #if CYTHON_COMPILING_IN_CPYTHON if (Py_TYPE(L) == &PySet_Type) { return PySet_Pop(L); } #endif return __Pyx_PyObject_CallMethod0(L, __pyx_n_s_pop); } #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyList_Pop(PyObject* L) { if (likely(PyList_GET_SIZE(L) > (((PyListObject*)L)->allocated >> 1))) { Py_SIZE(L) -= 1; return PyList_GET_ITEM(L, PyList_GET_SIZE(L)); } return __Pyx_CallUnboundCMethod0(&__pyx_umethod_PyList_Type_pop, L); } #endif /* SliceObject */ static CYTHON_INLINE int __Pyx_PyObject_SetSlice(PyObject* obj, PyObject* value, Py_ssize_t cstart, Py_ssize_t cstop, PyObject** _py_start, PyObject** _py_stop, PyObject** _py_slice, int has_cstart, int has_cstop, CYTHON_UNUSED int wraparound) { #if CYTHON_COMPILING_IN_CPYTHON PyMappingMethods* mp; #if PY_MAJOR_VERSION < 3 PySequenceMethods* ms = Py_TYPE(obj)->tp_as_sequence; if (likely(ms && ms->sq_ass_slice)) { if (!has_cstart) { if (_py_start && (*_py_start != Py_None)) { cstart = __Pyx_PyIndex_AsSsize_t(*_py_start); if ((cstart == (Py_ssize_t)-1) && PyErr_Occurred()) goto bad; } else cstart = 0; } if (!has_cstop) { if (_py_stop && (*_py_stop != Py_None)) { cstop = __Pyx_PyIndex_AsSsize_t(*_py_stop); if ((cstop == (Py_ssize_t)-1) && PyErr_Occurred()) goto bad; } else cstop = PY_SSIZE_T_MAX; } if (wraparound && unlikely((cstart < 0) | (cstop < 0)) && likely(ms->sq_length)) { Py_ssize_t l = ms->sq_length(obj); if (likely(l >= 0)) { if (cstop < 0) { cstop += l; if (cstop < 0) cstop = 0; } if (cstart < 0) { cstart += l; if (cstart < 0) cstart = 0; } } else { if (!PyErr_ExceptionMatches(PyExc_OverflowError)) goto bad; PyErr_Clear(); } } return ms->sq_ass_slice(obj, cstart, cstop, value); } #endif mp = Py_TYPE(obj)->tp_as_mapping; if (likely(mp && mp->mp_ass_subscript)) #endif { int result; PyObject *py_slice, *py_start, *py_stop; if (_py_slice) { py_slice = *_py_slice; } else { PyObject* owned_start = NULL; PyObject* owned_stop = NULL; if (_py_start) { py_start = *_py_start; } else { if (has_cstart) { owned_start = py_start = PyInt_FromSsize_t(cstart); if (unlikely(!py_start)) goto bad; } else py_start = Py_None; } if (_py_stop) { py_stop = *_py_stop; } else { if (has_cstop) { owned_stop = py_stop = PyInt_FromSsize_t(cstop); if (unlikely(!py_stop)) { Py_XDECREF(owned_start); goto bad; } } else py_stop = Py_None; } py_slice = PySlice_New(py_start, py_stop, Py_None); Py_XDECREF(owned_start); Py_XDECREF(owned_stop); if (unlikely(!py_slice)) goto bad; } #if CYTHON_COMPILING_IN_CPYTHON result = mp->mp_ass_subscript(obj, py_slice, value); #else result = value ? PyObject_SetItem(obj, py_slice, value) : PyObject_DelItem(obj, py_slice); #endif if (!_py_slice) { Py_DECREF(py_slice); } return result; } PyErr_Format(PyExc_TypeError, "'%.200s' object does not support slice %.10s", Py_TYPE(obj)->tp_name, value ? "assignment" : "deletion"); bad: return -1; } /* SliceTupleAndList */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE void __Pyx_crop_slice(Py_ssize_t* _start, Py_ssize_t* _stop, Py_ssize_t* _length) { Py_ssize_t start = *_start, stop = *_stop, length = *_length; if (start < 0) { start += length; if (start < 0) start = 0; } if (stop < 0) stop += length; else if (stop > length) stop = length; *_length = stop - start; *_start = start; *_stop = stop; } static CYTHON_INLINE void __Pyx_copy_object_array(PyObject** CYTHON_RESTRICT src, PyObject** CYTHON_RESTRICT dest, Py_ssize_t length) { PyObject *v; Py_ssize_t i; for (i = 0; i < length; i++) { v = dest[i] = src[i]; Py_INCREF(v); } } static CYTHON_INLINE PyObject* __Pyx_PyList_GetSlice( PyObject* src, Py_ssize_t start, Py_ssize_t stop) { PyObject* dest; Py_ssize_t length = PyList_GET_SIZE(src); __Pyx_crop_slice(&start, &stop, &length); if (unlikely(length <= 0)) return PyList_New(0); dest = PyList_New(length); if (unlikely(!dest)) return NULL; __Pyx_copy_object_array( ((PyListObject*)src)->ob_item + start, ((PyListObject*)dest)->ob_item, length); return dest; } static CYTHON_INLINE PyObject* __Pyx_PyTuple_GetSlice( PyObject* src, Py_ssize_t start, Py_ssize_t stop) { PyObject* dest; Py_ssize_t length = PyTuple_GET_SIZE(src); __Pyx_crop_slice(&start, &stop, &length); if (unlikely(length <= 0)) return PyTuple_New(0); dest = PyTuple_New(length); if (unlikely(!dest)) return NULL; __Pyx_copy_object_array( ((PyTupleObject*)src)->ob_item + start, ((PyTupleObject*)dest)->ob_item, length); return dest; } #endif /* GetModuleGlobalName */ static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name) { PyObject *result; #if CYTHON_COMPILING_IN_CPYTHON result = PyDict_GetItem(__pyx_d, name); if (likely(result)) { Py_INCREF(result); } else { #else result = PyObject_GetItem(__pyx_d, name); if (!result) { PyErr_Clear(); #endif result = __Pyx_GetBuiltinName(name); } return result; } /* SetVTable */ static int __Pyx_SetVtable(PyObject *dict, void *vtable) { #if PY_VERSION_HEX >= 0x02070000 PyObject *ob = PyCapsule_New(vtable, 0, 0); #else PyObject *ob = PyCObject_FromVoidPtr(vtable, 0); #endif if (!ob) goto bad; if (PyDict_SetItem(dict, __pyx_n_s_pyx_vtable, ob) < 0) goto bad; Py_DECREF(ob); return 0; bad: Py_XDECREF(ob); return -1; } /* CalculateMetaclass */ static PyObject *__Pyx_CalculateMetaclass(PyTypeObject *metaclass, PyObject *bases) { Py_ssize_t i, nbases = PyTuple_GET_SIZE(bases); for (i=0; i < nbases; i++) { PyTypeObject *tmptype; PyObject *tmp = PyTuple_GET_ITEM(bases, i); tmptype = Py_TYPE(tmp); #if PY_MAJOR_VERSION < 3 if (tmptype == &PyClass_Type) continue; #endif if (!metaclass) { metaclass = tmptype; continue; } if (PyType_IsSubtype(metaclass, tmptype)) continue; if (PyType_IsSubtype(tmptype, metaclass)) { metaclass = tmptype; continue; } PyErr_SetString(PyExc_TypeError, "metaclass conflict: " "the metaclass of a derived class " "must be a (non-strict) subclass " "of the metaclasses of all its bases"); return NULL; } if (!metaclass) { #if PY_MAJOR_VERSION < 3 metaclass = &PyClass_Type; #else metaclass = &PyType_Type; #endif } Py_INCREF((PyObject*) metaclass); return (PyObject*) metaclass; } /* Py3ClassCreate */ static PyObject *__Pyx_Py3MetaclassPrepare(PyObject *metaclass, PyObject *bases, PyObject *name, PyObject *qualname, PyObject *mkw, PyObject *modname, PyObject *doc) { PyObject *ns; if (metaclass) { PyObject *prep = __Pyx_PyObject_GetAttrStr(metaclass, __pyx_n_s_prepare); if (prep) { PyObject *pargs = PyTuple_Pack(2, name, bases); if (unlikely(!pargs)) { Py_DECREF(prep); return NULL; } ns = PyObject_Call(prep, pargs, mkw); Py_DECREF(prep); Py_DECREF(pargs); } else { if (unlikely(!PyErr_ExceptionMatches(PyExc_AttributeError))) return NULL; PyErr_Clear(); ns = PyDict_New(); } } else { ns = PyDict_New(); } if (unlikely(!ns)) return NULL; if (unlikely(PyObject_SetItem(ns, __pyx_n_s_module, modname) < 0)) goto bad; if (unlikely(PyObject_SetItem(ns, __pyx_n_s_qualname, qualname) < 0)) goto bad; if (unlikely(doc && PyObject_SetItem(ns, __pyx_n_s_doc, doc) < 0)) goto bad; return ns; bad: Py_DECREF(ns); return NULL; } static PyObject *__Pyx_Py3ClassCreate(PyObject *metaclass, PyObject *name, PyObject *bases, PyObject *dict, PyObject *mkw, int calculate_metaclass, int allow_py2_metaclass) { PyObject *result, *margs; PyObject *owned_metaclass = NULL; if (allow_py2_metaclass) { owned_metaclass = PyObject_GetItem(dict, __pyx_n_s_metaclass); if (owned_metaclass) { metaclass = owned_metaclass; } else if (likely(PyErr_ExceptionMatches(PyExc_KeyError))) { PyErr_Clear(); } else { return NULL; } } if (calculate_metaclass && (!metaclass || PyType_Check(metaclass))) { metaclass = __Pyx_CalculateMetaclass((PyTypeObject*) metaclass, bases); Py_XDECREF(owned_metaclass); if (unlikely(!metaclass)) return NULL; owned_metaclass = metaclass; } margs = PyTuple_Pack(3, name, bases, dict); if (unlikely(!margs)) { result = NULL; } else { result = PyObject_Call(metaclass, margs, mkw); Py_DECREF(margs); } Py_XDECREF(owned_metaclass); return result; } /* FetchCommonType */ static PyTypeObject* __Pyx_FetchCommonType(PyTypeObject* type) { PyObject* fake_module; PyTypeObject* cached_type = NULL; fake_module = PyImport_AddModule((char*) "_cython_" CYTHON_ABI); if (!fake_module) return NULL; Py_INCREF(fake_module); cached_type = (PyTypeObject*) PyObject_GetAttrString(fake_module, type->tp_name); if (cached_type) { if (!PyType_Check((PyObject*)cached_type)) { PyErr_Format(PyExc_TypeError, "Shared Cython type %.200s is not a type object", type->tp_name); goto bad; } if (cached_type->tp_basicsize != type->tp_basicsize) { PyErr_Format(PyExc_TypeError, "Shared Cython type %.200s has the wrong size, try recompiling", type->tp_name); goto bad; } } else { if (!PyErr_ExceptionMatches(PyExc_AttributeError)) goto bad; PyErr_Clear(); if (PyType_Ready(type) < 0) goto bad; if (PyObject_SetAttrString(fake_module, type->tp_name, (PyObject*) type) < 0) goto bad; Py_INCREF(type); cached_type = type; } done: Py_DECREF(fake_module); return cached_type; bad: Py_XDECREF(cached_type); cached_type = NULL; goto done; } /* CythonFunction */ static PyObject * __Pyx_CyFunction_get_doc(__pyx_CyFunctionObject *op, CYTHON_UNUSED void *closure) { if (unlikely(op->func_doc == NULL)) { if (op->func.m_ml->ml_doc) { #if PY_MAJOR_VERSION >= 3 op->func_doc = PyUnicode_FromString(op->func.m_ml->ml_doc); #else op->func_doc = PyString_FromString(op->func.m_ml->ml_doc); #endif if (unlikely(op->func_doc == NULL)) return NULL; } else { Py_INCREF(Py_None); return Py_None; } } Py_INCREF(op->func_doc); return op->func_doc; } static int __Pyx_CyFunction_set_doc(__pyx_CyFunctionObject *op, PyObject *value) { PyObject *tmp = op->func_doc; if (value == NULL) { value = Py_None; } Py_INCREF(value); op->func_doc = value; Py_XDECREF(tmp); return 0; } static PyObject * __Pyx_CyFunction_get_name(__pyx_CyFunctionObject *op) { if (unlikely(op->func_name == NULL)) { #if PY_MAJOR_VERSION >= 3 op->func_name = PyUnicode_InternFromString(op->func.m_ml->ml_name); #else op->func_name = PyString_InternFromString(op->func.m_ml->ml_name); #endif if (unlikely(op->func_name == NULL)) return NULL; } Py_INCREF(op->func_name); return op->func_name; } static int __Pyx_CyFunction_set_name(__pyx_CyFunctionObject *op, PyObject *value) { PyObject *tmp; #if PY_MAJOR_VERSION >= 3 if (unlikely(value == NULL || !PyUnicode_Check(value))) { #else if (unlikely(value == NULL || !PyString_Check(value))) { #endif PyErr_SetString(PyExc_TypeError, "__name__ must be set to a string object"); return -1; } tmp = op->func_name; Py_INCREF(value); op->func_name = value; Py_XDECREF(tmp); return 0; } static PyObject * __Pyx_CyFunction_get_qualname(__pyx_CyFunctionObject *op) { Py_INCREF(op->func_qualname); return op->func_qualname; } static int __Pyx_CyFunction_set_qualname(__pyx_CyFunctionObject *op, PyObject *value) { PyObject *tmp; #if PY_MAJOR_VERSION >= 3 if (unlikely(value == NULL || !PyUnicode_Check(value))) { #else if (unlikely(value == NULL || !PyString_Check(value))) { #endif PyErr_SetString(PyExc_TypeError, "__qualname__ must be set to a string object"); return -1; } tmp = op->func_qualname; Py_INCREF(value); op->func_qualname = value; Py_XDECREF(tmp); return 0; } static PyObject * __Pyx_CyFunction_get_self(__pyx_CyFunctionObject *m, CYTHON_UNUSED void *closure) { PyObject *self; self = m->func_closure; if (self == NULL) self = Py_None; Py_INCREF(self); return self; } static PyObject * __Pyx_CyFunction_get_dict(__pyx_CyFunctionObject *op) { if (unlikely(op->func_dict == NULL)) { op->func_dict = PyDict_New(); if (unlikely(op->func_dict == NULL)) return NULL; } Py_INCREF(op->func_dict); return op->func_dict; } static int __Pyx_CyFunction_set_dict(__pyx_CyFunctionObject *op, PyObject *value) { PyObject *tmp; if (unlikely(value == NULL)) { PyErr_SetString(PyExc_TypeError, "function's dictionary may not be deleted"); return -1; } if (unlikely(!PyDict_Check(value))) { PyErr_SetString(PyExc_TypeError, "setting function's dictionary to a non-dict"); return -1; } tmp = op->func_dict; Py_INCREF(value); op->func_dict = value; Py_XDECREF(tmp); return 0; } static PyObject * __Pyx_CyFunction_get_globals(__pyx_CyFunctionObject *op) { Py_INCREF(op->func_globals); return op->func_globals; } static PyObject * __Pyx_CyFunction_get_closure(CYTHON_UNUSED __pyx_CyFunctionObject *op) { Py_INCREF(Py_None); return Py_None; } static PyObject * __Pyx_CyFunction_get_code(__pyx_CyFunctionObject *op) { PyObject* result = (op->func_code) ? op->func_code : Py_None; Py_INCREF(result); return result; } static int __Pyx_CyFunction_init_defaults(__pyx_CyFunctionObject *op) { int result = 0; PyObject *res = op->defaults_getter((PyObject *) op); if (unlikely(!res)) return -1; #if CYTHON_COMPILING_IN_CPYTHON op->defaults_tuple = PyTuple_GET_ITEM(res, 0); Py_INCREF(op->defaults_tuple); op->defaults_kwdict = PyTuple_GET_ITEM(res, 1); Py_INCREF(op->defaults_kwdict); #else op->defaults_tuple = PySequence_ITEM(res, 0); if (unlikely(!op->defaults_tuple)) result = -1; else { op->defaults_kwdict = PySequence_ITEM(res, 1); if (unlikely(!op->defaults_kwdict)) result = -1; } #endif Py_DECREF(res); return result; } static int __Pyx_CyFunction_set_defaults(__pyx_CyFunctionObject *op, PyObject* value) { PyObject* tmp; if (!value) { value = Py_None; } else if (value != Py_None && !PyTuple_Check(value)) { PyErr_SetString(PyExc_TypeError, "__defaults__ must be set to a tuple object"); return -1; } Py_INCREF(value); tmp = op->defaults_tuple; op->defaults_tuple = value; Py_XDECREF(tmp); return 0; } static PyObject * __Pyx_CyFunction_get_defaults(__pyx_CyFunctionObject *op) { PyObject* result = op->defaults_tuple; if (unlikely(!result)) { if (op->defaults_getter) { if (__Pyx_CyFunction_init_defaults(op) < 0) return NULL; result = op->defaults_tuple; } else { result = Py_None; } } Py_INCREF(result); return result; } static int __Pyx_CyFunction_set_kwdefaults(__pyx_CyFunctionObject *op, PyObject* value) { PyObject* tmp; if (!value) { value = Py_None; } else if (value != Py_None && !PyDict_Check(value)) { PyErr_SetString(PyExc_TypeError, "__kwdefaults__ must be set to a dict object"); return -1; } Py_INCREF(value); tmp = op->defaults_kwdict; op->defaults_kwdict = value; Py_XDECREF(tmp); return 0; } static PyObject * __Pyx_CyFunction_get_kwdefaults(__pyx_CyFunctionObject *op) { PyObject* result = op->defaults_kwdict; if (unlikely(!result)) { if (op->defaults_getter) { if (__Pyx_CyFunction_init_defaults(op) < 0) return NULL; result = op->defaults_kwdict; } else { result = Py_None; } } Py_INCREF(result); return result; } static int __Pyx_CyFunction_set_annotations(__pyx_CyFunctionObject *op, PyObject* value) { PyObject* tmp; if (!value || value == Py_None) { value = NULL; } else if (!PyDict_Check(value)) { PyErr_SetString(PyExc_TypeError, "__annotations__ must be set to a dict object"); return -1; } Py_XINCREF(value); tmp = op->func_annotations; op->func_annotations = value; Py_XDECREF(tmp); return 0; } static PyObject * __Pyx_CyFunction_get_annotations(__pyx_CyFunctionObject *op) { PyObject* result = op->func_annotations; if (unlikely(!result)) { result = PyDict_New(); if (unlikely(!result)) return NULL; op->func_annotations = result; } Py_INCREF(result); return result; } static PyGetSetDef __pyx_CyFunction_getsets[] = { {(char *) "func_doc", (getter)__Pyx_CyFunction_get_doc, (setter)__Pyx_CyFunction_set_doc, 0, 0}, {(char *) "__doc__", (getter)__Pyx_CyFunction_get_doc, (setter)__Pyx_CyFunction_set_doc, 0, 0}, {(char *) "func_name", (getter)__Pyx_CyFunction_get_name, (setter)__Pyx_CyFunction_set_name, 0, 0}, {(char *) "__name__", (getter)__Pyx_CyFunction_get_name, (setter)__Pyx_CyFunction_set_name, 0, 0}, {(char *) "__qualname__", (getter)__Pyx_CyFunction_get_qualname, (setter)__Pyx_CyFunction_set_qualname, 0, 0}, {(char *) "__self__", (getter)__Pyx_CyFunction_get_self, 0, 0, 0}, {(char *) "func_dict", (getter)__Pyx_CyFunction_get_dict, (setter)__Pyx_CyFunction_set_dict, 0, 0}, {(char *) "__dict__", (getter)__Pyx_CyFunction_get_dict, (setter)__Pyx_CyFunction_set_dict, 0, 0}, {(char *) "func_globals", (getter)__Pyx_CyFunction_get_globals, 0, 0, 0}, {(char *) "__globals__", (getter)__Pyx_CyFunction_get_globals, 0, 0, 0}, {(char *) "func_closure", (getter)__Pyx_CyFunction_get_closure, 0, 0, 0}, {(char *) "__closure__", (getter)__Pyx_CyFunction_get_closure, 0, 0, 0}, {(char *) "func_code", (getter)__Pyx_CyFunction_get_code, 0, 0, 0}, {(char *) "__code__", (getter)__Pyx_CyFunction_get_code, 0, 0, 0}, {(char *) "func_defaults", (getter)__Pyx_CyFunction_get_defaults, (setter)__Pyx_CyFunction_set_defaults, 0, 0}, {(char *) "__defaults__", (getter)__Pyx_CyFunction_get_defaults, (setter)__Pyx_CyFunction_set_defaults, 0, 0}, {(char *) "__kwdefaults__", (getter)__Pyx_CyFunction_get_kwdefaults, (setter)__Pyx_CyFunction_set_kwdefaults, 0, 0}, {(char *) "__annotations__", (getter)__Pyx_CyFunction_get_annotations, (setter)__Pyx_CyFunction_set_annotations, 0, 0}, {0, 0, 0, 0, 0} }; static PyMemberDef __pyx_CyFunction_members[] = { {(char *) "__module__", T_OBJECT, offsetof(__pyx_CyFunctionObject, func.m_module), PY_WRITE_RESTRICTED, 0}, {0, 0, 0, 0, 0} }; static PyObject * __Pyx_CyFunction_reduce(__pyx_CyFunctionObject *m, CYTHON_UNUSED PyObject *args) { #if PY_MAJOR_VERSION >= 3 return PyUnicode_FromString(m->func.m_ml->ml_name); #else return PyString_FromString(m->func.m_ml->ml_name); #endif } static PyMethodDef __pyx_CyFunction_methods[] = { {"__reduce__", (PyCFunction)__Pyx_CyFunction_reduce, METH_VARARGS, 0}, {0, 0, 0, 0} }; #if PY_VERSION_HEX < 0x030500A0 #define __Pyx_CyFunction_weakreflist(cyfunc) ((cyfunc)->func_weakreflist) #else #define __Pyx_CyFunction_weakreflist(cyfunc) ((cyfunc)->func.m_weakreflist) #endif static PyObject *__Pyx_CyFunction_New(PyTypeObject *type, PyMethodDef *ml, int flags, PyObject* qualname, PyObject *closure, PyObject *module, PyObject* globals, PyObject* code) { __pyx_CyFunctionObject *op = PyObject_GC_New(__pyx_CyFunctionObject, type); if (op == NULL) return NULL; op->flags = flags; __Pyx_CyFunction_weakreflist(op) = NULL; op->func.m_ml = ml; op->func.m_self = (PyObject *) op; Py_XINCREF(closure); op->func_closure = closure; Py_XINCREF(module); op->func.m_module = module; op->func_dict = NULL; op->func_name = NULL; Py_INCREF(qualname); op->func_qualname = qualname; op->func_doc = NULL; op->func_classobj = NULL; op->func_globals = globals; Py_INCREF(op->func_globals); Py_XINCREF(code); op->func_code = code; op->defaults_pyobjects = 0; op->defaults = NULL; op->defaults_tuple = NULL; op->defaults_kwdict = NULL; op->defaults_getter = NULL; op->func_annotations = NULL; PyObject_GC_Track(op); return (PyObject *) op; } static int __Pyx_CyFunction_clear(__pyx_CyFunctionObject *m) { Py_CLEAR(m->func_closure); Py_CLEAR(m->func.m_module); Py_CLEAR(m->func_dict); Py_CLEAR(m->func_name); Py_CLEAR(m->func_qualname); Py_CLEAR(m->func_doc); Py_CLEAR(m->func_globals); Py_CLEAR(m->func_code); Py_CLEAR(m->func_classobj); Py_CLEAR(m->defaults_tuple); Py_CLEAR(m->defaults_kwdict); Py_CLEAR(m->func_annotations); if (m->defaults) { PyObject **pydefaults = __Pyx_CyFunction_Defaults(PyObject *, m); int i; for (i = 0; i < m->defaults_pyobjects; i++) Py_XDECREF(pydefaults[i]); PyObject_Free(m->defaults); m->defaults = NULL; } return 0; } static void __Pyx_CyFunction_dealloc(__pyx_CyFunctionObject *m) { PyObject_GC_UnTrack(m); if (__Pyx_CyFunction_weakreflist(m) != NULL) PyObject_ClearWeakRefs((PyObject *) m); __Pyx_CyFunction_clear(m); PyObject_GC_Del(m); } static int __Pyx_CyFunction_traverse(__pyx_CyFunctionObject *m, visitproc visit, void *arg) { Py_VISIT(m->func_closure); Py_VISIT(m->func.m_module); Py_VISIT(m->func_dict); Py_VISIT(m->func_name); Py_VISIT(m->func_qualname); Py_VISIT(m->func_doc); Py_VISIT(m->func_globals); Py_VISIT(m->func_code); Py_VISIT(m->func_classobj); Py_VISIT(m->defaults_tuple); Py_VISIT(m->defaults_kwdict); if (m->defaults) { PyObject **pydefaults = __Pyx_CyFunction_Defaults(PyObject *, m); int i; for (i = 0; i < m->defaults_pyobjects; i++) Py_VISIT(pydefaults[i]); } return 0; } static PyObject *__Pyx_CyFunction_descr_get(PyObject *func, PyObject *obj, PyObject *type) { __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func; if (m->flags & __Pyx_CYFUNCTION_STATICMETHOD) { Py_INCREF(func); return func; } if (m->flags & __Pyx_CYFUNCTION_CLASSMETHOD) { if (type == NULL) type = (PyObject *)(Py_TYPE(obj)); return __Pyx_PyMethod_New(func, type, (PyObject *)(Py_TYPE(type))); } if (obj == Py_None) obj = NULL; return __Pyx_PyMethod_New(func, obj, type); } static PyObject* __Pyx_CyFunction_repr(__pyx_CyFunctionObject *op) { #if PY_MAJOR_VERSION >= 3 return PyUnicode_FromFormat("", op->func_qualname, (void *)op); #else return PyString_FromFormat("", PyString_AsString(op->func_qualname), (void *)op); #endif } #if CYTHON_COMPILING_IN_PYPY static PyObject * __Pyx_CyFunction_Call(PyObject *func, PyObject *arg, PyObject *kw) { PyCFunctionObject* f = (PyCFunctionObject*)func; PyCFunction meth = f->m_ml->ml_meth; PyObject *self = f->m_self; Py_ssize_t size; switch (f->m_ml->ml_flags & (METH_VARARGS | METH_KEYWORDS | METH_NOARGS | METH_O)) { case METH_VARARGS: if (likely(kw == NULL || PyDict_Size(kw) == 0)) return (*meth)(self, arg); break; case METH_VARARGS | METH_KEYWORDS: return (*(PyCFunctionWithKeywords)meth)(self, arg, kw); case METH_NOARGS: if (likely(kw == NULL || PyDict_Size(kw) == 0)) { size = PyTuple_GET_SIZE(arg); if (likely(size == 0)) return (*meth)(self, NULL); PyErr_Format(PyExc_TypeError, "%.200s() takes no arguments (%" CYTHON_FORMAT_SSIZE_T "d given)", f->m_ml->ml_name, size); return NULL; } break; case METH_O: if (likely(kw == NULL || PyDict_Size(kw) == 0)) { size = PyTuple_GET_SIZE(arg); if (likely(size == 1)) { PyObject *result, *arg0 = PySequence_ITEM(arg, 0); if (unlikely(!arg0)) return NULL; result = (*meth)(self, arg0); Py_DECREF(arg0); return result; } PyErr_Format(PyExc_TypeError, "%.200s() takes exactly one argument (%" CYTHON_FORMAT_SSIZE_T "d given)", f->m_ml->ml_name, size); return NULL; } break; default: PyErr_SetString(PyExc_SystemError, "Bad call flags in " "__Pyx_CyFunction_Call. METH_OLDARGS is no " "longer supported!"); return NULL; } PyErr_Format(PyExc_TypeError, "%.200s() takes no keyword arguments", f->m_ml->ml_name); return NULL; } #else static PyObject * __Pyx_CyFunction_Call(PyObject *func, PyObject *arg, PyObject *kw) { return PyCFunction_Call(func, arg, kw); } #endif static PyTypeObject __pyx_CyFunctionType_type = { PyVarObject_HEAD_INIT(0, 0) "cython_function_or_method", sizeof(__pyx_CyFunctionObject), 0, (destructor) __Pyx_CyFunction_dealloc, 0, 0, 0, #if PY_MAJOR_VERSION < 3 0, #else 0, #endif (reprfunc) __Pyx_CyFunction_repr, 0, 0, 0, 0, __Pyx_CyFunction_Call, 0, 0, 0, 0, Py_TPFLAGS_DEFAULT | Py_TPFLAGS_HAVE_GC, 0, (traverseproc) __Pyx_CyFunction_traverse, (inquiry) __Pyx_CyFunction_clear, 0, #if PY_VERSION_HEX < 0x030500A0 offsetof(__pyx_CyFunctionObject, func_weakreflist), #else offsetof(PyCFunctionObject, m_weakreflist), #endif 0, 0, __pyx_CyFunction_methods, __pyx_CyFunction_members, __pyx_CyFunction_getsets, 0, 0, __Pyx_CyFunction_descr_get, 0, offsetof(__pyx_CyFunctionObject, func_dict), 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, #if PY_VERSION_HEX >= 0x030400a1 0, #endif }; static int __pyx_CyFunction_init(void) { #if !CYTHON_COMPILING_IN_PYPY __pyx_CyFunctionType_type.tp_call = PyCFunction_Call; #endif __pyx_CyFunctionType = __Pyx_FetchCommonType(&__pyx_CyFunctionType_type); if (__pyx_CyFunctionType == NULL) { return -1; } return 0; } static CYTHON_INLINE void *__Pyx_CyFunction_InitDefaults(PyObject *func, size_t size, int pyobjects) { __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func; m->defaults = PyObject_Malloc(size); if (!m->defaults) return PyErr_NoMemory(); memset(m->defaults, 0, size); m->defaults_pyobjects = pyobjects; return m->defaults; } static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsTuple(PyObject *func, PyObject *tuple) { __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func; m->defaults_tuple = tuple; Py_INCREF(tuple); } static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsKwDict(PyObject *func, PyObject *dict) { __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func; m->defaults_kwdict = dict; Py_INCREF(dict); } static CYTHON_INLINE void __Pyx_CyFunction_SetAnnotationsDict(PyObject *func, PyObject *dict) { __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func; m->func_annotations = dict; Py_INCREF(dict); } /* GetNameInClass */ static PyObject *__Pyx_GetNameInClass(PyObject *nmspace, PyObject *name) { PyObject *result; result = __Pyx_PyObject_GetAttrStr(nmspace, name); if (!result) result = __Pyx_GetModuleGlobalName(name); return result; } /* ModuleImport */ #ifndef __PYX_HAVE_RT_ImportModule #define __PYX_HAVE_RT_ImportModule static PyObject *__Pyx_ImportModule(const char *name) { PyObject *py_name = 0; PyObject *py_module = 0; py_name = __Pyx_PyIdentifier_FromString(name); if (!py_name) goto bad; py_module = PyImport_Import(py_name); Py_DECREF(py_name); return py_module; bad: Py_XDECREF(py_name); return 0; } #endif /* RegisterModuleCleanup */ #if PY_MAJOR_VERSION < 3 static PyObject* __pyx_module_cleanup_atexit(PyObject *module, CYTHON_UNUSED PyObject *unused) { __pyx_module_cleanup(module); Py_INCREF(Py_None); return Py_None; } static int __Pyx_RegisterCleanup(void) { static PyMethodDef cleanup_def = { "__cleanup", (PyCFunction)__pyx_module_cleanup_atexit, METH_NOARGS, 0}; PyObject *cleanup_func = 0; PyObject *atexit = 0; PyObject *reg = 0; PyObject *args = 0; PyObject *res = 0; int ret = -1; cleanup_func = PyCFunction_New(&cleanup_def, 0); if (!cleanup_func) goto bad; atexit = __Pyx_ImportModule("atexit"); if (!atexit) goto bad; reg = PyObject_GetAttrString(atexit, "_exithandlers"); if (reg && PyList_Check(reg)) { PyObject *a, *kw; a = PyTuple_New(0); kw = PyDict_New(); if (!a || !kw) { Py_XDECREF(a); Py_XDECREF(kw); goto bad; } args = PyTuple_Pack(3, cleanup_func, a, kw); Py_DECREF(a); Py_DECREF(kw); if (!args) goto bad; ret = PyList_Insert(reg, 0, args); } else { if (!reg) PyErr_Clear(); Py_XDECREF(reg); reg = PyObject_GetAttrString(atexit, "register"); if (!reg) goto bad; args = PyTuple_Pack(1, cleanup_func); if (!args) goto bad; res = PyObject_CallObject(reg, args); if (!res) goto bad; ret = 0; } bad: Py_XDECREF(cleanup_func); Py_XDECREF(atexit); Py_XDECREF(reg); Py_XDECREF(args); Py_XDECREF(res); return ret; } #else static int __Pyx_RegisterCleanup(void) { if (0) __Pyx_ImportModule(NULL); return 0; } #endif /* CodeObjectCache */ static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { int start = 0, mid = 0, end = count - 1; if (end >= 0 && code_line > entries[end].code_line) { return count; } while (start < end) { mid = start + (end - start) / 2; if (code_line < entries[mid].code_line) { end = mid; } else if (code_line > entries[mid].code_line) { start = mid + 1; } else { return mid; } } if (code_line <= entries[mid].code_line) { return mid; } else { return mid + 1; } } static PyCodeObject *__pyx_find_code_object(int code_line) { PyCodeObject* code_object; int pos; if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) { return NULL; } pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line); if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) { return NULL; } code_object = __pyx_code_cache.entries[pos].code_object; Py_INCREF(code_object); return code_object; } static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) { int pos, i; __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries; if (unlikely(!code_line)) { return; } if (unlikely(!entries)) { entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry)); if (likely(entries)) { __pyx_code_cache.entries = entries; __pyx_code_cache.max_count = 64; __pyx_code_cache.count = 1; entries[0].code_line = code_line; entries[0].code_object = code_object; Py_INCREF(code_object); } return; } pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line); if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) { PyCodeObject* tmp = entries[pos].code_object; entries[pos].code_object = code_object; Py_DECREF(tmp); return; } if (__pyx_code_cache.count == __pyx_code_cache.max_count) { int new_max = __pyx_code_cache.max_count + 64; entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc( __pyx_code_cache.entries, (size_t)new_max*sizeof(__Pyx_CodeObjectCacheEntry)); if (unlikely(!entries)) { return; } __pyx_code_cache.entries = entries; __pyx_code_cache.max_count = new_max; } for (i=__pyx_code_cache.count; i>pos; i--) { entries[i] = entries[i-1]; } entries[pos].code_line = code_line; entries[pos].code_object = code_object; __pyx_code_cache.count++; Py_INCREF(code_object); } /* AddTraceback */ #include "compile.h" #include "frameobject.h" #include "traceback.h" static PyCodeObject* __Pyx_CreateCodeObjectForTraceback( const char *funcname, int c_line, int py_line, const char *filename) { PyCodeObject *py_code = 0; PyObject *py_srcfile = 0; PyObject *py_funcname = 0; #if PY_MAJOR_VERSION < 3 py_srcfile = PyString_FromString(filename); #else py_srcfile = PyUnicode_FromString(filename); #endif if (!py_srcfile) goto bad; if (c_line) { #if PY_MAJOR_VERSION < 3 py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line); #else py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line); #endif } else { #if PY_MAJOR_VERSION < 3 py_funcname = PyString_FromString(funcname); #else py_funcname = PyUnicode_FromString(funcname); #endif } if (!py_funcname) goto bad; py_code = __Pyx_PyCode_New( 0, 0, 0, 0, 0, __pyx_empty_bytes, /*PyObject *code,*/ __pyx_empty_tuple, /*PyObject *consts,*/ __pyx_empty_tuple, /*PyObject *names,*/ __pyx_empty_tuple, /*PyObject *varnames,*/ __pyx_empty_tuple, /*PyObject *freevars,*/ __pyx_empty_tuple, /*PyObject *cellvars,*/ py_srcfile, /*PyObject *filename,*/ py_funcname, /*PyObject *name,*/ py_line, __pyx_empty_bytes /*PyObject *lnotab*/ ); Py_DECREF(py_srcfile); Py_DECREF(py_funcname); return py_code; bad: Py_XDECREF(py_srcfile); Py_XDECREF(py_funcname); return NULL; } static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename) { PyCodeObject *py_code = 0; PyFrameObject *py_frame = 0; py_code = __pyx_find_code_object(c_line ? c_line : py_line); if (!py_code) { py_code = __Pyx_CreateCodeObjectForTraceback( funcname, c_line, py_line, filename); if (!py_code) goto bad; __pyx_insert_code_object(c_line ? c_line : py_line, py_code); } py_frame = PyFrame_New( PyThreadState_GET(), /*PyThreadState *tstate,*/ py_code, /*PyCodeObject *code,*/ __pyx_d, /*PyObject *globals,*/ 0 /*PyObject *locals*/ ); if (!py_frame) goto bad; py_frame->f_lineno = py_line; PyTraceBack_Here(py_frame); bad: Py_XDECREF(py_code); Py_XDECREF(py_frame); } /* CIntFromPyVerify */ #define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\ __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 0) #define __PYX_VERIFY_RETURN_INT_EXC(target_type, func_type, func_value)\ __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 1) #define __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, exc)\ {\ func_type value = func_value;\ if (sizeof(target_type) < sizeof(func_type)) {\ if (unlikely(value != (func_type) (target_type) value)) {\ func_type zero = 0;\ if (exc && unlikely(value == (func_type)-1 && PyErr_Occurred()))\ return (target_type) -1;\ if (is_unsigned && unlikely(value < zero))\ goto raise_neg_overflow;\ else\ goto raise_overflow;\ }\ }\ return (target_type) value;\ } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { const int neg_one = (int) -1, const_zero = (int) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(int) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(int) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(int) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(int), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_InsertMode(InsertMode value) { const InsertMode neg_one = (InsertMode) -1, const_zero = (InsertMode) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(InsertMode) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(InsertMode) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(InsertMode) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(InsertMode) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(InsertMode) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(InsertMode), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_ScatterMode(ScatterMode value) { const ScatterMode neg_one = (ScatterMode) -1, const_zero = (ScatterMode) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(ScatterMode) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(ScatterMode) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(ScatterMode) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(ScatterMode) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(ScatterMode) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(ScatterMode), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_NormType(NormType value) { const NormType neg_one = (NormType) -1, const_zero = (NormType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(NormType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(NormType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(NormType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(NormType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(NormType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(NormType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscViewerFormat(PetscViewerFormat value) { const PetscViewerFormat neg_one = (PetscViewerFormat) -1, const_zero = (PetscViewerFormat) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PetscViewerFormat) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscViewerFormat) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PetscViewerFormat) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PetscViewerFormat) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscViewerFormat) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PetscViewerFormat), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscFileMode(PetscFileMode value) { const PetscFileMode neg_one = (PetscFileMode) -1, const_zero = (PetscFileMode) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PetscFileMode) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscFileMode) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PetscFileMode) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PetscFileMode) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscFileMode) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PetscFileMode), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_ISGlobalToLocalMappingType(ISGlobalToLocalMappingType value) { const ISGlobalToLocalMappingType neg_one = (ISGlobalToLocalMappingType) -1, const_zero = (ISGlobalToLocalMappingType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(ISGlobalToLocalMappingType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(ISGlobalToLocalMappingType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(ISGlobalToLocalMappingType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(ISGlobalToLocalMappingType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(ISGlobalToLocalMappingType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(ISGlobalToLocalMappingType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_VecOption(VecOption value) { const VecOption neg_one = (VecOption) -1, const_zero = (VecOption) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(VecOption) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(VecOption) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(VecOption) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(VecOption) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(VecOption) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(VecOption), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatOption(MatOption value) { const MatOption neg_one = (MatOption) -1, const_zero = (MatOption) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(MatOption) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatOption) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(MatOption) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(MatOption) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatOption) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(MatOption), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatAssemblyType(MatAssemblyType value) { const MatAssemblyType neg_one = (MatAssemblyType) -1, const_zero = (MatAssemblyType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(MatAssemblyType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatAssemblyType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(MatAssemblyType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(MatAssemblyType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatAssemblyType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(MatAssemblyType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatInfoType(MatInfoType value) { const MatInfoType neg_one = (MatInfoType) -1, const_zero = (MatInfoType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(MatInfoType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatInfoType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(MatInfoType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(MatInfoType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatInfoType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(MatInfoType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatStructure(MatStructure value) { const MatStructure neg_one = (MatStructure) -1, const_zero = (MatStructure) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(MatStructure) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatStructure) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(MatStructure) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(MatStructure) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatStructure) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(MatStructure), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatFactorShiftType(MatFactorShiftType value) { const MatFactorShiftType neg_one = (MatFactorShiftType) -1, const_zero = (MatFactorShiftType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(MatFactorShiftType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatFactorShiftType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(MatFactorShiftType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(MatFactorShiftType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatFactorShiftType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(MatFactorShiftType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatSORType(MatSORType value) { const MatSORType neg_one = (MatSORType) -1, const_zero = (MatSORType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(MatSORType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatSORType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(MatSORType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(MatSORType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatSORType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(MatSORType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCSide(PCSide value) { const PCSide neg_one = (PCSide) -1, const_zero = (PCSide) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PCSide) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCSide) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PCSide) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PCSide) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCSide) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PCSide), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCASMType(PCASMType value) { const PCASMType neg_one = (PCASMType) -1, const_zero = (PCASMType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PCASMType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCASMType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PCASMType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PCASMType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCASMType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PCASMType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCGASMType(PCGASMType value) { const PCGASMType neg_one = (PCGASMType) -1, const_zero = (PCGASMType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PCGASMType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCGASMType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PCGASMType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PCGASMType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCGASMType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PCGASMType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCMGType(PCMGType value) { const PCMGType neg_one = (PCMGType) -1, const_zero = (PCMGType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PCMGType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCMGType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PCMGType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PCMGType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCMGType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PCMGType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCCompositeType(PCCompositeType value) { const PCCompositeType neg_one = (PCCompositeType) -1, const_zero = (PCCompositeType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PCCompositeType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCCompositeType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PCCompositeType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PCCompositeType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCCompositeType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PCCompositeType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCFieldSplitSchurPreType(PCFieldSplitSchurPreType value) { const PCFieldSplitSchurPreType neg_one = (PCFieldSplitSchurPreType) -1, const_zero = (PCFieldSplitSchurPreType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PCFieldSplitSchurPreType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCFieldSplitSchurPreType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PCFieldSplitSchurPreType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PCFieldSplitSchurPreType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCFieldSplitSchurPreType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PCFieldSplitSchurPreType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PCFieldSplitSchurFactType(PCFieldSplitSchurFactType value) { const PCFieldSplitSchurFactType neg_one = (PCFieldSplitSchurFactType) -1, const_zero = (PCFieldSplitSchurFactType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PCFieldSplitSchurFactType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCFieldSplitSchurFactType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PCFieldSplitSchurFactType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PCFieldSplitSchurFactType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PCFieldSplitSchurFactType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PCFieldSplitSchurFactType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_KSPNormType(KSPNormType value) { const KSPNormType neg_one = (KSPNormType) -1, const_zero = (KSPNormType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(KSPNormType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(KSPNormType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(KSPNormType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(KSPNormType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(KSPNormType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(KSPNormType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_KSPConvergedReason(KSPConvergedReason value) { const KSPConvergedReason neg_one = (KSPConvergedReason) -1, const_zero = (KSPConvergedReason) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(KSPConvergedReason) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(KSPConvergedReason) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(KSPConvergedReason) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(KSPConvergedReason) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(KSPConvergedReason) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(KSPConvergedReason), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_SNESNormSchedule(SNESNormSchedule value) { const SNESNormSchedule neg_one = (SNESNormSchedule) -1, const_zero = (SNESNormSchedule) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(SNESNormSchedule) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(SNESNormSchedule) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(SNESNormSchedule) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(SNESNormSchedule) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(SNESNormSchedule) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(SNESNormSchedule), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_SNESConvergedReason(SNESConvergedReason value) { const SNESConvergedReason neg_one = (SNESConvergedReason) -1, const_zero = (SNESConvergedReason) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(SNESConvergedReason) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(SNESConvergedReason) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(SNESConvergedReason) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(SNESConvergedReason) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(SNESConvergedReason) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(SNESConvergedReason), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_TSProblemType(TSProblemType value) { const TSProblemType neg_one = (TSProblemType) -1, const_zero = (TSProblemType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(TSProblemType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(TSProblemType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(TSProblemType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(TSProblemType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(TSProblemType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(TSProblemType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_TSEquationType(TSEquationType value) { const TSEquationType neg_one = (TSEquationType) -1, const_zero = (TSEquationType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(TSEquationType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(TSEquationType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(TSEquationType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(TSEquationType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(TSEquationType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(TSEquationType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_TSExactFinalTimeOption(TSExactFinalTimeOption value) { const TSExactFinalTimeOption neg_one = (TSExactFinalTimeOption) -1, const_zero = (TSExactFinalTimeOption) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(TSExactFinalTimeOption) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(TSExactFinalTimeOption) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(TSExactFinalTimeOption) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(TSExactFinalTimeOption) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(TSExactFinalTimeOption) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(TSExactFinalTimeOption), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_TSConvergedReason(TSConvergedReason value) { const TSConvergedReason neg_one = (TSConvergedReason) -1, const_zero = (TSConvergedReason) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(TSConvergedReason) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(TSConvergedReason) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(TSConvergedReason) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(TSConvergedReason) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(TSConvergedReason) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(TSConvergedReason), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_TaoConvergedReason(TaoConvergedReason value) { const TaoConvergedReason neg_one = (TaoConvergedReason) -1, const_zero = (TaoConvergedReason) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(TaoConvergedReason) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(TaoConvergedReason) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(TaoConvergedReason) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(TaoConvergedReason) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(TaoConvergedReason) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(TaoConvergedReason), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_DMBoundaryType(DMBoundaryType value) { const DMBoundaryType neg_one = (DMBoundaryType) -1, const_zero = (DMBoundaryType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(DMBoundaryType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(DMBoundaryType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(DMBoundaryType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(DMBoundaryType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(DMBoundaryType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(DMBoundaryType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_DMDAStencilType(DMDAStencilType value) { const DMDAStencilType neg_one = (DMDAStencilType) -1, const_zero = (DMDAStencilType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(DMDAStencilType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(DMDAStencilType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(DMDAStencilType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(DMDAStencilType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(DMDAStencilType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(DMDAStencilType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_DMDAInterpolationType(DMDAInterpolationType value) { const DMDAInterpolationType neg_one = (DMDAInterpolationType) -1, const_zero = (DMDAInterpolationType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(DMDAInterpolationType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(DMDAInterpolationType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(DMDAInterpolationType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(DMDAInterpolationType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(DMDAInterpolationType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(DMDAInterpolationType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_DMDAElementType(DMDAElementType value) { const DMDAElementType neg_one = (DMDAElementType) -1, const_zero = (DMDAElementType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(DMDAElementType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(DMDAElementType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(DMDAElementType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(DMDAElementType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(DMDAElementType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(DMDAElementType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { const long neg_one = (long) -1, const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(long) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(long) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(long) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(long), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscInt(PetscInt value) { const PetscInt neg_one = (PetscInt) -1, const_zero = (PetscInt) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PetscInt) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscInt) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PetscInt) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PetscInt) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscInt) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PetscInt), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscBool(PetscBool value) { const PetscBool neg_one = (PetscBool) -1, const_zero = (PetscBool) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PetscBool) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscBool) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PetscBool) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PetscBool) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscBool) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PetscBool), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscLogStage(PetscLogStage value) { const PetscLogStage neg_one = (PetscLogStage) -1, const_zero = (PetscLogStage) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PetscLogStage) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscLogStage) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PetscLogStage) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PetscLogStage) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscLogStage) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PetscLogStage), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscClassId(PetscClassId value) { const PetscClassId neg_one = (PetscClassId) -1, const_zero = (PetscClassId) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PetscClassId) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscClassId) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PetscClassId) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PetscClassId) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscClassId) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PetscClassId), little, !is_unsigned); } } static PyObject* __pyx_convert__to_py_PetscEventPerfInfo(PetscEventPerfInfo s) { PyObject* res; PyObject* member; res = PyDict_New(); if (unlikely(!res)) return NULL; member = __Pyx_PyInt_From_int(s.count); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_count, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.flops); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_flops, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.time); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_time, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.numMessages); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_numMessages, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.messageLength); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_messageLength, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.numReductions); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_numReductions, member) < 0)) goto bad; Py_DECREF(member); return res; bad: Py_XDECREF(member); Py_DECREF(res); return NULL; } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscLogEvent(PetscLogEvent value) { const PetscLogEvent neg_one = (PetscLogEvent) -1, const_zero = (PetscLogEvent) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PetscLogEvent) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscLogEvent) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PetscLogEvent) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PetscLogEvent) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscLogEvent) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PetscLogEvent), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MPI_Fint(MPI_Fint value) { const MPI_Fint neg_one = (MPI_Fint) -1, const_zero = (MPI_Fint) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(MPI_Fint) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MPI_Fint) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(MPI_Fint) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(MPI_Fint) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MPI_Fint) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(MPI_Fint), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_unsigned_long(unsigned long value) { const unsigned long neg_one = (unsigned long) -1, const_zero = (unsigned long) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(unsigned long) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(unsigned long) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(unsigned long) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(unsigned long) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(unsigned long) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(unsigned long), little, !is_unsigned); } } static PyObject* __pyx_convert__to_py_MatInfo(MatInfo s) { PyObject* res; PyObject* member; res = PyDict_New(); if (unlikely(!res)) return NULL; member = PyFloat_FromDouble(s.block_size); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_block_size, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.nz_allocated); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_nz_allocated, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.nz_used); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_nz_used, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.nz_unneeded); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_nz_unneeded, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.memory); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_memory, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.assemblies); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_assemblies, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.mallocs); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_mallocs, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.fill_ratio_given); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_fill_ratio_given, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.fill_ratio_needed); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_fill_ratio_needed, member) < 0)) goto bad; Py_DECREF(member); member = PyFloat_FromDouble(s.factor_mallocs); if (unlikely(!member)) goto bad; if (unlikely(PyDict_SetItem(res, __pyx_n_s_factor_mallocs, member) < 0)) goto bad; Py_DECREF(member); return res; bad: Py_XDECREF(member); Py_DECREF(res); return NULL; } /* ClassMethod */ static PyObject* __Pyx_Method_ClassMethod(PyObject *method) { #if CYTHON_COMPILING_IN_PYPY if (PyObject_TypeCheck(method, &PyWrapperDescr_Type)) { return PyClassMethod_New(method); } #else static PyTypeObject *methoddescr_type = NULL; if (methoddescr_type == NULL) { PyObject *meth = PyObject_GetAttrString((PyObject*)&PyList_Type, "append"); if (!meth) return NULL; methoddescr_type = Py_TYPE(meth); Py_DECREF(meth); } if (PyObject_TypeCheck(method, methoddescr_type)) { PyMethodDescrObject *descr = (PyMethodDescrObject *)method; #if PY_VERSION_HEX < 0x03020000 PyTypeObject *d_type = descr->d_type; #else PyTypeObject *d_type = descr->d_common.d_type; #endif return PyDescr_NewClassMethod(d_type, descr->d_method); } #endif else if (PyMethod_Check(method)) { return PyClassMethod_New(PyMethod_GET_FUNCTION(method)); } else if (PyCFunction_Check(method)) { return PyClassMethod_New(method); } #ifdef __Pyx_CyFunction_USED else if (PyObject_TypeCheck(method, __pyx_CyFunctionType)) { return PyClassMethod_New(method); } #endif PyErr_SetString(PyExc_TypeError, "Class-level classmethod() can only be called on " "a method_descriptor or instance method."); return NULL; } /* CIntFromPy */ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { const int neg_one = (int) -1, const_zero = (int) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(int) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(int, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (int) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (int) 0; case 1: __PYX_VERIFY_RETURN_INT(int, digit, digits[0]) case 2: if (8 * sizeof(int) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) >= 2 * PyLong_SHIFT) { return (int) (((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; case 3: if (8 * sizeof(int) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) >= 3 * PyLong_SHIFT) { return (int) (((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; case 4: if (8 * sizeof(int) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) >= 4 * PyLong_SHIFT) { return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (int) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(int) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(int, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(int, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (int) 0; case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(int, digit, +digits[0]) case -2: if (8 * sizeof(int) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { return (int) (((int)-1)*(((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 2: if (8 * sizeof(int) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { return (int) ((((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case -3: if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { return (int) (((int)-1)*(((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 3: if (8 * sizeof(int) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { return (int) ((((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case -4: if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { return (int) (((int)-1)*(((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 4: if (8 * sizeof(int) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { return (int) ((((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; } #endif if (sizeof(int) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(int, long, PyLong_AsLong(x)) } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(int, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else int val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (int) -1; } } else { int val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (int) -1; val = __Pyx_PyInt_As_int(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to int"); return (int) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to int"); return (int) -1; } /* CIntFromPy */ static CYTHON_INLINE PetscInt __Pyx_PyInt_As_PetscInt(PyObject *x) { const PetscInt neg_one = (PetscInt) -1, const_zero = (PetscInt) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PetscInt) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PetscInt, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PetscInt) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PetscInt) 0; case 1: __PYX_VERIFY_RETURN_INT(PetscInt, digit, digits[0]) case 2: if (8 * sizeof(PetscInt) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) >= 2 * PyLong_SHIFT) { return (PetscInt) (((((PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0])); } } break; case 3: if (8 * sizeof(PetscInt) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) >= 3 * PyLong_SHIFT) { return (PetscInt) (((((((PetscInt)digits[2]) << PyLong_SHIFT) | (PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0])); } } break; case 4: if (8 * sizeof(PetscInt) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) >= 4 * PyLong_SHIFT) { return (PetscInt) (((((((((PetscInt)digits[3]) << PyLong_SHIFT) | (PetscInt)digits[2]) << PyLong_SHIFT) | (PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PetscInt) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PetscInt) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PetscInt, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PetscInt) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PetscInt, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PetscInt) 0; case -1: __PYX_VERIFY_RETURN_INT(PetscInt, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PetscInt, digit, +digits[0]) case -2: if (8 * sizeof(PetscInt) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) - 1 > 2 * PyLong_SHIFT) { return (PetscInt) (((PetscInt)-1)*(((((PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0]))); } } break; case 2: if (8 * sizeof(PetscInt) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) - 1 > 2 * PyLong_SHIFT) { return (PetscInt) ((((((PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0]))); } } break; case -3: if (8 * sizeof(PetscInt) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) - 1 > 3 * PyLong_SHIFT) { return (PetscInt) (((PetscInt)-1)*(((((((PetscInt)digits[2]) << PyLong_SHIFT) | (PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0]))); } } break; case 3: if (8 * sizeof(PetscInt) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) - 1 > 3 * PyLong_SHIFT) { return (PetscInt) ((((((((PetscInt)digits[2]) << PyLong_SHIFT) | (PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0]))); } } break; case -4: if (8 * sizeof(PetscInt) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) - 1 > 4 * PyLong_SHIFT) { return (PetscInt) (((PetscInt)-1)*(((((((((PetscInt)digits[3]) << PyLong_SHIFT) | (PetscInt)digits[2]) << PyLong_SHIFT) | (PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0]))); } } break; case 4: if (8 * sizeof(PetscInt) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) - 1 > 4 * PyLong_SHIFT) { return (PetscInt) ((((((((((PetscInt)digits[3]) << PyLong_SHIFT) | (PetscInt)digits[2]) << PyLong_SHIFT) | (PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0]))); } } break; } #endif if (sizeof(PetscInt) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PetscInt, long, PyLong_AsLong(x)) } else if (sizeof(PetscInt) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PetscInt, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PetscInt val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PetscInt) -1; } } else { PetscInt val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PetscInt) -1; val = __Pyx_PyInt_As_PetscInt(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PetscInt"); return (PetscInt) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PetscInt"); return (PetscInt) -1; } /* CIntFromPy */ static CYTHON_INLINE InsertMode __Pyx_PyInt_As_InsertMode(PyObject *x) { const InsertMode neg_one = (InsertMode) -1, const_zero = (InsertMode) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(InsertMode) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(InsertMode, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (InsertMode) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (InsertMode) 0; case 1: __PYX_VERIFY_RETURN_INT(InsertMode, digit, digits[0]) case 2: if (8 * sizeof(InsertMode) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(InsertMode, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(InsertMode) >= 2 * PyLong_SHIFT) { return (InsertMode) (((((InsertMode)digits[1]) << PyLong_SHIFT) | (InsertMode)digits[0])); } } break; case 3: if (8 * sizeof(InsertMode) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(InsertMode, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(InsertMode) >= 3 * PyLong_SHIFT) { return (InsertMode) (((((((InsertMode)digits[2]) << PyLong_SHIFT) | (InsertMode)digits[1]) << PyLong_SHIFT) | (InsertMode)digits[0])); } } break; case 4: if (8 * sizeof(InsertMode) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(InsertMode, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(InsertMode) >= 4 * PyLong_SHIFT) { return (InsertMode) (((((((((InsertMode)digits[3]) << PyLong_SHIFT) | (InsertMode)digits[2]) << PyLong_SHIFT) | (InsertMode)digits[1]) << PyLong_SHIFT) | (InsertMode)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (InsertMode) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(InsertMode) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(InsertMode, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(InsertMode) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(InsertMode, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (InsertMode) 0; case -1: __PYX_VERIFY_RETURN_INT(InsertMode, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(InsertMode, digit, +digits[0]) case -2: if (8 * sizeof(InsertMode) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(InsertMode, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(InsertMode) - 1 > 2 * PyLong_SHIFT) { return (InsertMode) (((InsertMode)-1)*(((((InsertMode)digits[1]) << PyLong_SHIFT) | (InsertMode)digits[0]))); } } break; case 2: if (8 * sizeof(InsertMode) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(InsertMode, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(InsertMode) - 1 > 2 * PyLong_SHIFT) { return (InsertMode) ((((((InsertMode)digits[1]) << PyLong_SHIFT) | (InsertMode)digits[0]))); } } break; case -3: if (8 * sizeof(InsertMode) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(InsertMode, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(InsertMode) - 1 > 3 * PyLong_SHIFT) { return (InsertMode) (((InsertMode)-1)*(((((((InsertMode)digits[2]) << PyLong_SHIFT) | (InsertMode)digits[1]) << PyLong_SHIFT) | (InsertMode)digits[0]))); } } break; case 3: if (8 * sizeof(InsertMode) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(InsertMode, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(InsertMode) - 1 > 3 * PyLong_SHIFT) { return (InsertMode) ((((((((InsertMode)digits[2]) << PyLong_SHIFT) | (InsertMode)digits[1]) << PyLong_SHIFT) | (InsertMode)digits[0]))); } } break; case -4: if (8 * sizeof(InsertMode) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(InsertMode, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(InsertMode) - 1 > 4 * PyLong_SHIFT) { return (InsertMode) (((InsertMode)-1)*(((((((((InsertMode)digits[3]) << PyLong_SHIFT) | (InsertMode)digits[2]) << PyLong_SHIFT) | (InsertMode)digits[1]) << PyLong_SHIFT) | (InsertMode)digits[0]))); } } break; case 4: if (8 * sizeof(InsertMode) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(InsertMode, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(InsertMode) - 1 > 4 * PyLong_SHIFT) { return (InsertMode) ((((((((((InsertMode)digits[3]) << PyLong_SHIFT) | (InsertMode)digits[2]) << PyLong_SHIFT) | (InsertMode)digits[1]) << PyLong_SHIFT) | (InsertMode)digits[0]))); } } break; } #endif if (sizeof(InsertMode) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(InsertMode, long, PyLong_AsLong(x)) } else if (sizeof(InsertMode) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(InsertMode, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else InsertMode val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (InsertMode) -1; } } else { InsertMode val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (InsertMode) -1; val = __Pyx_PyInt_As_InsertMode(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to InsertMode"); return (InsertMode) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to InsertMode"); return (InsertMode) -1; } /* CIntFromPy */ static CYTHON_INLINE ScatterMode __Pyx_PyInt_As_ScatterMode(PyObject *x) { const ScatterMode neg_one = (ScatterMode) -1, const_zero = (ScatterMode) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(ScatterMode) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(ScatterMode, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (ScatterMode) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (ScatterMode) 0; case 1: __PYX_VERIFY_RETURN_INT(ScatterMode, digit, digits[0]) case 2: if (8 * sizeof(ScatterMode) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ScatterMode, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ScatterMode) >= 2 * PyLong_SHIFT) { return (ScatterMode) (((((ScatterMode)digits[1]) << PyLong_SHIFT) | (ScatterMode)digits[0])); } } break; case 3: if (8 * sizeof(ScatterMode) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ScatterMode, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ScatterMode) >= 3 * PyLong_SHIFT) { return (ScatterMode) (((((((ScatterMode)digits[2]) << PyLong_SHIFT) | (ScatterMode)digits[1]) << PyLong_SHIFT) | (ScatterMode)digits[0])); } } break; case 4: if (8 * sizeof(ScatterMode) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ScatterMode, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ScatterMode) >= 4 * PyLong_SHIFT) { return (ScatterMode) (((((((((ScatterMode)digits[3]) << PyLong_SHIFT) | (ScatterMode)digits[2]) << PyLong_SHIFT) | (ScatterMode)digits[1]) << PyLong_SHIFT) | (ScatterMode)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (ScatterMode) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(ScatterMode) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(ScatterMode, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(ScatterMode) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(ScatterMode, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (ScatterMode) 0; case -1: __PYX_VERIFY_RETURN_INT(ScatterMode, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(ScatterMode, digit, +digits[0]) case -2: if (8 * sizeof(ScatterMode) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ScatterMode, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ScatterMode) - 1 > 2 * PyLong_SHIFT) { return (ScatterMode) (((ScatterMode)-1)*(((((ScatterMode)digits[1]) << PyLong_SHIFT) | (ScatterMode)digits[0]))); } } break; case 2: if (8 * sizeof(ScatterMode) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ScatterMode, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ScatterMode) - 1 > 2 * PyLong_SHIFT) { return (ScatterMode) ((((((ScatterMode)digits[1]) << PyLong_SHIFT) | (ScatterMode)digits[0]))); } } break; case -3: if (8 * sizeof(ScatterMode) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ScatterMode, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ScatterMode) - 1 > 3 * PyLong_SHIFT) { return (ScatterMode) (((ScatterMode)-1)*(((((((ScatterMode)digits[2]) << PyLong_SHIFT) | (ScatterMode)digits[1]) << PyLong_SHIFT) | (ScatterMode)digits[0]))); } } break; case 3: if (8 * sizeof(ScatterMode) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ScatterMode, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ScatterMode) - 1 > 3 * PyLong_SHIFT) { return (ScatterMode) ((((((((ScatterMode)digits[2]) << PyLong_SHIFT) | (ScatterMode)digits[1]) << PyLong_SHIFT) | (ScatterMode)digits[0]))); } } break; case -4: if (8 * sizeof(ScatterMode) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ScatterMode, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ScatterMode) - 1 > 4 * PyLong_SHIFT) { return (ScatterMode) (((ScatterMode)-1)*(((((((((ScatterMode)digits[3]) << PyLong_SHIFT) | (ScatterMode)digits[2]) << PyLong_SHIFT) | (ScatterMode)digits[1]) << PyLong_SHIFT) | (ScatterMode)digits[0]))); } } break; case 4: if (8 * sizeof(ScatterMode) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ScatterMode, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ScatterMode) - 1 > 4 * PyLong_SHIFT) { return (ScatterMode) ((((((((((ScatterMode)digits[3]) << PyLong_SHIFT) | (ScatterMode)digits[2]) << PyLong_SHIFT) | (ScatterMode)digits[1]) << PyLong_SHIFT) | (ScatterMode)digits[0]))); } } break; } #endif if (sizeof(ScatterMode) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(ScatterMode, long, PyLong_AsLong(x)) } else if (sizeof(ScatterMode) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(ScatterMode, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else ScatterMode val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (ScatterMode) -1; } } else { ScatterMode val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (ScatterMode) -1; val = __Pyx_PyInt_As_ScatterMode(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to ScatterMode"); return (ScatterMode) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to ScatterMode"); return (ScatterMode) -1; } /* CIntFromPy */ static CYTHON_INLINE PetscFileMode __Pyx_PyInt_As_PetscFileMode(PyObject *x) { const PetscFileMode neg_one = (PetscFileMode) -1, const_zero = (PetscFileMode) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PetscFileMode) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PetscFileMode, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PetscFileMode) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PetscFileMode) 0; case 1: __PYX_VERIFY_RETURN_INT(PetscFileMode, digit, digits[0]) case 2: if (8 * sizeof(PetscFileMode) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscFileMode, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscFileMode) >= 2 * PyLong_SHIFT) { return (PetscFileMode) (((((PetscFileMode)digits[1]) << PyLong_SHIFT) | (PetscFileMode)digits[0])); } } break; case 3: if (8 * sizeof(PetscFileMode) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscFileMode, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscFileMode) >= 3 * PyLong_SHIFT) { return (PetscFileMode) (((((((PetscFileMode)digits[2]) << PyLong_SHIFT) | (PetscFileMode)digits[1]) << PyLong_SHIFT) | (PetscFileMode)digits[0])); } } break; case 4: if (8 * sizeof(PetscFileMode) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscFileMode, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscFileMode) >= 4 * PyLong_SHIFT) { return (PetscFileMode) (((((((((PetscFileMode)digits[3]) << PyLong_SHIFT) | (PetscFileMode)digits[2]) << PyLong_SHIFT) | (PetscFileMode)digits[1]) << PyLong_SHIFT) | (PetscFileMode)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PetscFileMode) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PetscFileMode) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PetscFileMode, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PetscFileMode) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PetscFileMode, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PetscFileMode) 0; case -1: __PYX_VERIFY_RETURN_INT(PetscFileMode, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PetscFileMode, digit, +digits[0]) case -2: if (8 * sizeof(PetscFileMode) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscFileMode, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscFileMode) - 1 > 2 * PyLong_SHIFT) { return (PetscFileMode) (((PetscFileMode)-1)*(((((PetscFileMode)digits[1]) << PyLong_SHIFT) | (PetscFileMode)digits[0]))); } } break; case 2: if (8 * sizeof(PetscFileMode) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscFileMode, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscFileMode) - 1 > 2 * PyLong_SHIFT) { return (PetscFileMode) ((((((PetscFileMode)digits[1]) << PyLong_SHIFT) | (PetscFileMode)digits[0]))); } } break; case -3: if (8 * sizeof(PetscFileMode) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscFileMode, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscFileMode) - 1 > 3 * PyLong_SHIFT) { return (PetscFileMode) (((PetscFileMode)-1)*(((((((PetscFileMode)digits[2]) << PyLong_SHIFT) | (PetscFileMode)digits[1]) << PyLong_SHIFT) | (PetscFileMode)digits[0]))); } } break; case 3: if (8 * sizeof(PetscFileMode) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscFileMode, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscFileMode) - 1 > 3 * PyLong_SHIFT) { return (PetscFileMode) ((((((((PetscFileMode)digits[2]) << PyLong_SHIFT) | (PetscFileMode)digits[1]) << PyLong_SHIFT) | (PetscFileMode)digits[0]))); } } break; case -4: if (8 * sizeof(PetscFileMode) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscFileMode, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscFileMode) - 1 > 4 * PyLong_SHIFT) { return (PetscFileMode) (((PetscFileMode)-1)*(((((((((PetscFileMode)digits[3]) << PyLong_SHIFT) | (PetscFileMode)digits[2]) << PyLong_SHIFT) | (PetscFileMode)digits[1]) << PyLong_SHIFT) | (PetscFileMode)digits[0]))); } } break; case 4: if (8 * sizeof(PetscFileMode) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscFileMode, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscFileMode) - 1 > 4 * PyLong_SHIFT) { return (PetscFileMode) ((((((((((PetscFileMode)digits[3]) << PyLong_SHIFT) | (PetscFileMode)digits[2]) << PyLong_SHIFT) | (PetscFileMode)digits[1]) << PyLong_SHIFT) | (PetscFileMode)digits[0]))); } } break; } #endif if (sizeof(PetscFileMode) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PetscFileMode, long, PyLong_AsLong(x)) } else if (sizeof(PetscFileMode) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PetscFileMode, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PetscFileMode val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PetscFileMode) -1; } } else { PetscFileMode val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PetscFileMode) -1; val = __Pyx_PyInt_As_PetscFileMode(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PetscFileMode"); return (PetscFileMode) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PetscFileMode"); return (PetscFileMode) -1; } /* CIntFromPy */ static CYTHON_INLINE MatStructure __Pyx_PyInt_As_MatStructure(PyObject *x) { const MatStructure neg_one = (MatStructure) -1, const_zero = (MatStructure) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(MatStructure) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(MatStructure, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (MatStructure) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (MatStructure) 0; case 1: __PYX_VERIFY_RETURN_INT(MatStructure, digit, digits[0]) case 2: if (8 * sizeof(MatStructure) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatStructure, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatStructure) >= 2 * PyLong_SHIFT) { return (MatStructure) (((((MatStructure)digits[1]) << PyLong_SHIFT) | (MatStructure)digits[0])); } } break; case 3: if (8 * sizeof(MatStructure) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatStructure, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatStructure) >= 3 * PyLong_SHIFT) { return (MatStructure) (((((((MatStructure)digits[2]) << PyLong_SHIFT) | (MatStructure)digits[1]) << PyLong_SHIFT) | (MatStructure)digits[0])); } } break; case 4: if (8 * sizeof(MatStructure) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatStructure, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatStructure) >= 4 * PyLong_SHIFT) { return (MatStructure) (((((((((MatStructure)digits[3]) << PyLong_SHIFT) | (MatStructure)digits[2]) << PyLong_SHIFT) | (MatStructure)digits[1]) << PyLong_SHIFT) | (MatStructure)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (MatStructure) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(MatStructure) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(MatStructure, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(MatStructure) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(MatStructure, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (MatStructure) 0; case -1: __PYX_VERIFY_RETURN_INT(MatStructure, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(MatStructure, digit, +digits[0]) case -2: if (8 * sizeof(MatStructure) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatStructure, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatStructure) - 1 > 2 * PyLong_SHIFT) { return (MatStructure) (((MatStructure)-1)*(((((MatStructure)digits[1]) << PyLong_SHIFT) | (MatStructure)digits[0]))); } } break; case 2: if (8 * sizeof(MatStructure) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatStructure, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatStructure) - 1 > 2 * PyLong_SHIFT) { return (MatStructure) ((((((MatStructure)digits[1]) << PyLong_SHIFT) | (MatStructure)digits[0]))); } } break; case -3: if (8 * sizeof(MatStructure) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatStructure, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatStructure) - 1 > 3 * PyLong_SHIFT) { return (MatStructure) (((MatStructure)-1)*(((((((MatStructure)digits[2]) << PyLong_SHIFT) | (MatStructure)digits[1]) << PyLong_SHIFT) | (MatStructure)digits[0]))); } } break; case 3: if (8 * sizeof(MatStructure) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatStructure, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatStructure) - 1 > 3 * PyLong_SHIFT) { return (MatStructure) ((((((((MatStructure)digits[2]) << PyLong_SHIFT) | (MatStructure)digits[1]) << PyLong_SHIFT) | (MatStructure)digits[0]))); } } break; case -4: if (8 * sizeof(MatStructure) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatStructure, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatStructure) - 1 > 4 * PyLong_SHIFT) { return (MatStructure) (((MatStructure)-1)*(((((((((MatStructure)digits[3]) << PyLong_SHIFT) | (MatStructure)digits[2]) << PyLong_SHIFT) | (MatStructure)digits[1]) << PyLong_SHIFT) | (MatStructure)digits[0]))); } } break; case 4: if (8 * sizeof(MatStructure) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatStructure, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatStructure) - 1 > 4 * PyLong_SHIFT) { return (MatStructure) ((((((((((MatStructure)digits[3]) << PyLong_SHIFT) | (MatStructure)digits[2]) << PyLong_SHIFT) | (MatStructure)digits[1]) << PyLong_SHIFT) | (MatStructure)digits[0]))); } } break; } #endif if (sizeof(MatStructure) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(MatStructure, long, PyLong_AsLong(x)) } else if (sizeof(MatStructure) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(MatStructure, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else MatStructure val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (MatStructure) -1; } } else { MatStructure val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (MatStructure) -1; val = __Pyx_PyInt_As_MatStructure(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to MatStructure"); return (MatStructure) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to MatStructure"); return (MatStructure) -1; } /* CIntFromPy */ static CYTHON_INLINE MatAssemblyType __Pyx_PyInt_As_MatAssemblyType(PyObject *x) { const MatAssemblyType neg_one = (MatAssemblyType) -1, const_zero = (MatAssemblyType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(MatAssemblyType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(MatAssemblyType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (MatAssemblyType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (MatAssemblyType) 0; case 1: __PYX_VERIFY_RETURN_INT(MatAssemblyType, digit, digits[0]) case 2: if (8 * sizeof(MatAssemblyType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatAssemblyType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatAssemblyType) >= 2 * PyLong_SHIFT) { return (MatAssemblyType) (((((MatAssemblyType)digits[1]) << PyLong_SHIFT) | (MatAssemblyType)digits[0])); } } break; case 3: if (8 * sizeof(MatAssemblyType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatAssemblyType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatAssemblyType) >= 3 * PyLong_SHIFT) { return (MatAssemblyType) (((((((MatAssemblyType)digits[2]) << PyLong_SHIFT) | (MatAssemblyType)digits[1]) << PyLong_SHIFT) | (MatAssemblyType)digits[0])); } } break; case 4: if (8 * sizeof(MatAssemblyType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatAssemblyType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatAssemblyType) >= 4 * PyLong_SHIFT) { return (MatAssemblyType) (((((((((MatAssemblyType)digits[3]) << PyLong_SHIFT) | (MatAssemblyType)digits[2]) << PyLong_SHIFT) | (MatAssemblyType)digits[1]) << PyLong_SHIFT) | (MatAssemblyType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (MatAssemblyType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(MatAssemblyType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(MatAssemblyType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(MatAssemblyType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(MatAssemblyType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (MatAssemblyType) 0; case -1: __PYX_VERIFY_RETURN_INT(MatAssemblyType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(MatAssemblyType, digit, +digits[0]) case -2: if (8 * sizeof(MatAssemblyType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatAssemblyType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatAssemblyType) - 1 > 2 * PyLong_SHIFT) { return (MatAssemblyType) (((MatAssemblyType)-1)*(((((MatAssemblyType)digits[1]) << PyLong_SHIFT) | (MatAssemblyType)digits[0]))); } } break; case 2: if (8 * sizeof(MatAssemblyType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatAssemblyType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatAssemblyType) - 1 > 2 * PyLong_SHIFT) { return (MatAssemblyType) ((((((MatAssemblyType)digits[1]) << PyLong_SHIFT) | (MatAssemblyType)digits[0]))); } } break; case -3: if (8 * sizeof(MatAssemblyType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatAssemblyType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatAssemblyType) - 1 > 3 * PyLong_SHIFT) { return (MatAssemblyType) (((MatAssemblyType)-1)*(((((((MatAssemblyType)digits[2]) << PyLong_SHIFT) | (MatAssemblyType)digits[1]) << PyLong_SHIFT) | (MatAssemblyType)digits[0]))); } } break; case 3: if (8 * sizeof(MatAssemblyType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatAssemblyType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatAssemblyType) - 1 > 3 * PyLong_SHIFT) { return (MatAssemblyType) ((((((((MatAssemblyType)digits[2]) << PyLong_SHIFT) | (MatAssemblyType)digits[1]) << PyLong_SHIFT) | (MatAssemblyType)digits[0]))); } } break; case -4: if (8 * sizeof(MatAssemblyType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatAssemblyType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatAssemblyType) - 1 > 4 * PyLong_SHIFT) { return (MatAssemblyType) (((MatAssemblyType)-1)*(((((((((MatAssemblyType)digits[3]) << PyLong_SHIFT) | (MatAssemblyType)digits[2]) << PyLong_SHIFT) | (MatAssemblyType)digits[1]) << PyLong_SHIFT) | (MatAssemblyType)digits[0]))); } } break; case 4: if (8 * sizeof(MatAssemblyType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatAssemblyType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatAssemblyType) - 1 > 4 * PyLong_SHIFT) { return (MatAssemblyType) ((((((((((MatAssemblyType)digits[3]) << PyLong_SHIFT) | (MatAssemblyType)digits[2]) << PyLong_SHIFT) | (MatAssemblyType)digits[1]) << PyLong_SHIFT) | (MatAssemblyType)digits[0]))); } } break; } #endif if (sizeof(MatAssemblyType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(MatAssemblyType, long, PyLong_AsLong(x)) } else if (sizeof(MatAssemblyType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(MatAssemblyType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else MatAssemblyType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (MatAssemblyType) -1; } } else { MatAssemblyType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (MatAssemblyType) -1; val = __Pyx_PyInt_As_MatAssemblyType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to MatAssemblyType"); return (MatAssemblyType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to MatAssemblyType"); return (MatAssemblyType) -1; } /* CIntFromPy */ static CYTHON_INLINE MatInfoType __Pyx_PyInt_As_MatInfoType(PyObject *x) { const MatInfoType neg_one = (MatInfoType) -1, const_zero = (MatInfoType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(MatInfoType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(MatInfoType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (MatInfoType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (MatInfoType) 0; case 1: __PYX_VERIFY_RETURN_INT(MatInfoType, digit, digits[0]) case 2: if (8 * sizeof(MatInfoType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatInfoType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatInfoType) >= 2 * PyLong_SHIFT) { return (MatInfoType) (((((MatInfoType)digits[1]) << PyLong_SHIFT) | (MatInfoType)digits[0])); } } break; case 3: if (8 * sizeof(MatInfoType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatInfoType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatInfoType) >= 3 * PyLong_SHIFT) { return (MatInfoType) (((((((MatInfoType)digits[2]) << PyLong_SHIFT) | (MatInfoType)digits[1]) << PyLong_SHIFT) | (MatInfoType)digits[0])); } } break; case 4: if (8 * sizeof(MatInfoType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatInfoType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatInfoType) >= 4 * PyLong_SHIFT) { return (MatInfoType) (((((((((MatInfoType)digits[3]) << PyLong_SHIFT) | (MatInfoType)digits[2]) << PyLong_SHIFT) | (MatInfoType)digits[1]) << PyLong_SHIFT) | (MatInfoType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (MatInfoType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(MatInfoType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(MatInfoType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(MatInfoType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(MatInfoType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (MatInfoType) 0; case -1: __PYX_VERIFY_RETURN_INT(MatInfoType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(MatInfoType, digit, +digits[0]) case -2: if (8 * sizeof(MatInfoType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatInfoType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatInfoType) - 1 > 2 * PyLong_SHIFT) { return (MatInfoType) (((MatInfoType)-1)*(((((MatInfoType)digits[1]) << PyLong_SHIFT) | (MatInfoType)digits[0]))); } } break; case 2: if (8 * sizeof(MatInfoType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatInfoType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatInfoType) - 1 > 2 * PyLong_SHIFT) { return (MatInfoType) ((((((MatInfoType)digits[1]) << PyLong_SHIFT) | (MatInfoType)digits[0]))); } } break; case -3: if (8 * sizeof(MatInfoType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatInfoType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatInfoType) - 1 > 3 * PyLong_SHIFT) { return (MatInfoType) (((MatInfoType)-1)*(((((((MatInfoType)digits[2]) << PyLong_SHIFT) | (MatInfoType)digits[1]) << PyLong_SHIFT) | (MatInfoType)digits[0]))); } } break; case 3: if (8 * sizeof(MatInfoType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatInfoType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatInfoType) - 1 > 3 * PyLong_SHIFT) { return (MatInfoType) ((((((((MatInfoType)digits[2]) << PyLong_SHIFT) | (MatInfoType)digits[1]) << PyLong_SHIFT) | (MatInfoType)digits[0]))); } } break; case -4: if (8 * sizeof(MatInfoType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatInfoType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatInfoType) - 1 > 4 * PyLong_SHIFT) { return (MatInfoType) (((MatInfoType)-1)*(((((((((MatInfoType)digits[3]) << PyLong_SHIFT) | (MatInfoType)digits[2]) << PyLong_SHIFT) | (MatInfoType)digits[1]) << PyLong_SHIFT) | (MatInfoType)digits[0]))); } } break; case 4: if (8 * sizeof(MatInfoType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatInfoType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatInfoType) - 1 > 4 * PyLong_SHIFT) { return (MatInfoType) ((((((((((MatInfoType)digits[3]) << PyLong_SHIFT) | (MatInfoType)digits[2]) << PyLong_SHIFT) | (MatInfoType)digits[1]) << PyLong_SHIFT) | (MatInfoType)digits[0]))); } } break; } #endif if (sizeof(MatInfoType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(MatInfoType, long, PyLong_AsLong(x)) } else if (sizeof(MatInfoType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(MatInfoType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else MatInfoType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (MatInfoType) -1; } } else { MatInfoType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (MatInfoType) -1; val = __Pyx_PyInt_As_MatInfoType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to MatInfoType"); return (MatInfoType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to MatInfoType"); return (MatInfoType) -1; } /* CIntFromPy */ static CYTHON_INLINE MatFactorShiftType __Pyx_PyInt_As_MatFactorShiftType(PyObject *x) { const MatFactorShiftType neg_one = (MatFactorShiftType) -1, const_zero = (MatFactorShiftType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(MatFactorShiftType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(MatFactorShiftType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (MatFactorShiftType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (MatFactorShiftType) 0; case 1: __PYX_VERIFY_RETURN_INT(MatFactorShiftType, digit, digits[0]) case 2: if (8 * sizeof(MatFactorShiftType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatFactorShiftType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatFactorShiftType) >= 2 * PyLong_SHIFT) { return (MatFactorShiftType) (((((MatFactorShiftType)digits[1]) << PyLong_SHIFT) | (MatFactorShiftType)digits[0])); } } break; case 3: if (8 * sizeof(MatFactorShiftType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatFactorShiftType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatFactorShiftType) >= 3 * PyLong_SHIFT) { return (MatFactorShiftType) (((((((MatFactorShiftType)digits[2]) << PyLong_SHIFT) | (MatFactorShiftType)digits[1]) << PyLong_SHIFT) | (MatFactorShiftType)digits[0])); } } break; case 4: if (8 * sizeof(MatFactorShiftType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatFactorShiftType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatFactorShiftType) >= 4 * PyLong_SHIFT) { return (MatFactorShiftType) (((((((((MatFactorShiftType)digits[3]) << PyLong_SHIFT) | (MatFactorShiftType)digits[2]) << PyLong_SHIFT) | (MatFactorShiftType)digits[1]) << PyLong_SHIFT) | (MatFactorShiftType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (MatFactorShiftType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(MatFactorShiftType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(MatFactorShiftType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(MatFactorShiftType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(MatFactorShiftType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (MatFactorShiftType) 0; case -1: __PYX_VERIFY_RETURN_INT(MatFactorShiftType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(MatFactorShiftType, digit, +digits[0]) case -2: if (8 * sizeof(MatFactorShiftType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatFactorShiftType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatFactorShiftType) - 1 > 2 * PyLong_SHIFT) { return (MatFactorShiftType) (((MatFactorShiftType)-1)*(((((MatFactorShiftType)digits[1]) << PyLong_SHIFT) | (MatFactorShiftType)digits[0]))); } } break; case 2: if (8 * sizeof(MatFactorShiftType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatFactorShiftType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatFactorShiftType) - 1 > 2 * PyLong_SHIFT) { return (MatFactorShiftType) ((((((MatFactorShiftType)digits[1]) << PyLong_SHIFT) | (MatFactorShiftType)digits[0]))); } } break; case -3: if (8 * sizeof(MatFactorShiftType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatFactorShiftType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatFactorShiftType) - 1 > 3 * PyLong_SHIFT) { return (MatFactorShiftType) (((MatFactorShiftType)-1)*(((((((MatFactorShiftType)digits[2]) << PyLong_SHIFT) | (MatFactorShiftType)digits[1]) << PyLong_SHIFT) | (MatFactorShiftType)digits[0]))); } } break; case 3: if (8 * sizeof(MatFactorShiftType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatFactorShiftType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatFactorShiftType) - 1 > 3 * PyLong_SHIFT) { return (MatFactorShiftType) ((((((((MatFactorShiftType)digits[2]) << PyLong_SHIFT) | (MatFactorShiftType)digits[1]) << PyLong_SHIFT) | (MatFactorShiftType)digits[0]))); } } break; case -4: if (8 * sizeof(MatFactorShiftType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatFactorShiftType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatFactorShiftType) - 1 > 4 * PyLong_SHIFT) { return (MatFactorShiftType) (((MatFactorShiftType)-1)*(((((((((MatFactorShiftType)digits[3]) << PyLong_SHIFT) | (MatFactorShiftType)digits[2]) << PyLong_SHIFT) | (MatFactorShiftType)digits[1]) << PyLong_SHIFT) | (MatFactorShiftType)digits[0]))); } } break; case 4: if (8 * sizeof(MatFactorShiftType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatFactorShiftType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatFactorShiftType) - 1 > 4 * PyLong_SHIFT) { return (MatFactorShiftType) ((((((((((MatFactorShiftType)digits[3]) << PyLong_SHIFT) | (MatFactorShiftType)digits[2]) << PyLong_SHIFT) | (MatFactorShiftType)digits[1]) << PyLong_SHIFT) | (MatFactorShiftType)digits[0]))); } } break; } #endif if (sizeof(MatFactorShiftType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(MatFactorShiftType, long, PyLong_AsLong(x)) } else if (sizeof(MatFactorShiftType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(MatFactorShiftType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else MatFactorShiftType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (MatFactorShiftType) -1; } } else { MatFactorShiftType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (MatFactorShiftType) -1; val = __Pyx_PyInt_As_MatFactorShiftType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to MatFactorShiftType"); return (MatFactorShiftType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to MatFactorShiftType"); return (MatFactorShiftType) -1; } /* CIntFromPy */ static CYTHON_INLINE KSPConvergedReason __Pyx_PyInt_As_KSPConvergedReason(PyObject *x) { const KSPConvergedReason neg_one = (KSPConvergedReason) -1, const_zero = (KSPConvergedReason) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(KSPConvergedReason) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(KSPConvergedReason, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (KSPConvergedReason) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (KSPConvergedReason) 0; case 1: __PYX_VERIFY_RETURN_INT(KSPConvergedReason, digit, digits[0]) case 2: if (8 * sizeof(KSPConvergedReason) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPConvergedReason, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPConvergedReason) >= 2 * PyLong_SHIFT) { return (KSPConvergedReason) (((((KSPConvergedReason)digits[1]) << PyLong_SHIFT) | (KSPConvergedReason)digits[0])); } } break; case 3: if (8 * sizeof(KSPConvergedReason) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPConvergedReason, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPConvergedReason) >= 3 * PyLong_SHIFT) { return (KSPConvergedReason) (((((((KSPConvergedReason)digits[2]) << PyLong_SHIFT) | (KSPConvergedReason)digits[1]) << PyLong_SHIFT) | (KSPConvergedReason)digits[0])); } } break; case 4: if (8 * sizeof(KSPConvergedReason) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPConvergedReason, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPConvergedReason) >= 4 * PyLong_SHIFT) { return (KSPConvergedReason) (((((((((KSPConvergedReason)digits[3]) << PyLong_SHIFT) | (KSPConvergedReason)digits[2]) << PyLong_SHIFT) | (KSPConvergedReason)digits[1]) << PyLong_SHIFT) | (KSPConvergedReason)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (KSPConvergedReason) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(KSPConvergedReason) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(KSPConvergedReason, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(KSPConvergedReason) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(KSPConvergedReason, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (KSPConvergedReason) 0; case -1: __PYX_VERIFY_RETURN_INT(KSPConvergedReason, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(KSPConvergedReason, digit, +digits[0]) case -2: if (8 * sizeof(KSPConvergedReason) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPConvergedReason, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPConvergedReason) - 1 > 2 * PyLong_SHIFT) { return (KSPConvergedReason) (((KSPConvergedReason)-1)*(((((KSPConvergedReason)digits[1]) << PyLong_SHIFT) | (KSPConvergedReason)digits[0]))); } } break; case 2: if (8 * sizeof(KSPConvergedReason) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPConvergedReason, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPConvergedReason) - 1 > 2 * PyLong_SHIFT) { return (KSPConvergedReason) ((((((KSPConvergedReason)digits[1]) << PyLong_SHIFT) | (KSPConvergedReason)digits[0]))); } } break; case -3: if (8 * sizeof(KSPConvergedReason) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPConvergedReason, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPConvergedReason) - 1 > 3 * PyLong_SHIFT) { return (KSPConvergedReason) (((KSPConvergedReason)-1)*(((((((KSPConvergedReason)digits[2]) << PyLong_SHIFT) | (KSPConvergedReason)digits[1]) << PyLong_SHIFT) | (KSPConvergedReason)digits[0]))); } } break; case 3: if (8 * sizeof(KSPConvergedReason) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPConvergedReason, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPConvergedReason) - 1 > 3 * PyLong_SHIFT) { return (KSPConvergedReason) ((((((((KSPConvergedReason)digits[2]) << PyLong_SHIFT) | (KSPConvergedReason)digits[1]) << PyLong_SHIFT) | (KSPConvergedReason)digits[0]))); } } break; case -4: if (8 * sizeof(KSPConvergedReason) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPConvergedReason, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPConvergedReason) - 1 > 4 * PyLong_SHIFT) { return (KSPConvergedReason) (((KSPConvergedReason)-1)*(((((((((KSPConvergedReason)digits[3]) << PyLong_SHIFT) | (KSPConvergedReason)digits[2]) << PyLong_SHIFT) | (KSPConvergedReason)digits[1]) << PyLong_SHIFT) | (KSPConvergedReason)digits[0]))); } } break; case 4: if (8 * sizeof(KSPConvergedReason) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPConvergedReason, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPConvergedReason) - 1 > 4 * PyLong_SHIFT) { return (KSPConvergedReason) ((((((((((KSPConvergedReason)digits[3]) << PyLong_SHIFT) | (KSPConvergedReason)digits[2]) << PyLong_SHIFT) | (KSPConvergedReason)digits[1]) << PyLong_SHIFT) | (KSPConvergedReason)digits[0]))); } } break; } #endif if (sizeof(KSPConvergedReason) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(KSPConvergedReason, long, PyLong_AsLong(x)) } else if (sizeof(KSPConvergedReason) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(KSPConvergedReason, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else KSPConvergedReason val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (KSPConvergedReason) -1; } } else { KSPConvergedReason val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (KSPConvergedReason) -1; val = __Pyx_PyInt_As_KSPConvergedReason(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to KSPConvergedReason"); return (KSPConvergedReason) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to KSPConvergedReason"); return (KSPConvergedReason) -1; } /* CIntFromPy */ static CYTHON_INLINE SNESConvergedReason __Pyx_PyInt_As_SNESConvergedReason(PyObject *x) { const SNESConvergedReason neg_one = (SNESConvergedReason) -1, const_zero = (SNESConvergedReason) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(SNESConvergedReason) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(SNESConvergedReason, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (SNESConvergedReason) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (SNESConvergedReason) 0; case 1: __PYX_VERIFY_RETURN_INT(SNESConvergedReason, digit, digits[0]) case 2: if (8 * sizeof(SNESConvergedReason) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESConvergedReason, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESConvergedReason) >= 2 * PyLong_SHIFT) { return (SNESConvergedReason) (((((SNESConvergedReason)digits[1]) << PyLong_SHIFT) | (SNESConvergedReason)digits[0])); } } break; case 3: if (8 * sizeof(SNESConvergedReason) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESConvergedReason, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESConvergedReason) >= 3 * PyLong_SHIFT) { return (SNESConvergedReason) (((((((SNESConvergedReason)digits[2]) << PyLong_SHIFT) | (SNESConvergedReason)digits[1]) << PyLong_SHIFT) | (SNESConvergedReason)digits[0])); } } break; case 4: if (8 * sizeof(SNESConvergedReason) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESConvergedReason, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESConvergedReason) >= 4 * PyLong_SHIFT) { return (SNESConvergedReason) (((((((((SNESConvergedReason)digits[3]) << PyLong_SHIFT) | (SNESConvergedReason)digits[2]) << PyLong_SHIFT) | (SNESConvergedReason)digits[1]) << PyLong_SHIFT) | (SNESConvergedReason)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (SNESConvergedReason) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(SNESConvergedReason) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(SNESConvergedReason, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(SNESConvergedReason) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(SNESConvergedReason, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (SNESConvergedReason) 0; case -1: __PYX_VERIFY_RETURN_INT(SNESConvergedReason, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(SNESConvergedReason, digit, +digits[0]) case -2: if (8 * sizeof(SNESConvergedReason) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESConvergedReason, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESConvergedReason) - 1 > 2 * PyLong_SHIFT) { return (SNESConvergedReason) (((SNESConvergedReason)-1)*(((((SNESConvergedReason)digits[1]) << PyLong_SHIFT) | (SNESConvergedReason)digits[0]))); } } break; case 2: if (8 * sizeof(SNESConvergedReason) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESConvergedReason, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESConvergedReason) - 1 > 2 * PyLong_SHIFT) { return (SNESConvergedReason) ((((((SNESConvergedReason)digits[1]) << PyLong_SHIFT) | (SNESConvergedReason)digits[0]))); } } break; case -3: if (8 * sizeof(SNESConvergedReason) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESConvergedReason, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESConvergedReason) - 1 > 3 * PyLong_SHIFT) { return (SNESConvergedReason) (((SNESConvergedReason)-1)*(((((((SNESConvergedReason)digits[2]) << PyLong_SHIFT) | (SNESConvergedReason)digits[1]) << PyLong_SHIFT) | (SNESConvergedReason)digits[0]))); } } break; case 3: if (8 * sizeof(SNESConvergedReason) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESConvergedReason, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESConvergedReason) - 1 > 3 * PyLong_SHIFT) { return (SNESConvergedReason) ((((((((SNESConvergedReason)digits[2]) << PyLong_SHIFT) | (SNESConvergedReason)digits[1]) << PyLong_SHIFT) | (SNESConvergedReason)digits[0]))); } } break; case -4: if (8 * sizeof(SNESConvergedReason) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESConvergedReason, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESConvergedReason) - 1 > 4 * PyLong_SHIFT) { return (SNESConvergedReason) (((SNESConvergedReason)-1)*(((((((((SNESConvergedReason)digits[3]) << PyLong_SHIFT) | (SNESConvergedReason)digits[2]) << PyLong_SHIFT) | (SNESConvergedReason)digits[1]) << PyLong_SHIFT) | (SNESConvergedReason)digits[0]))); } } break; case 4: if (8 * sizeof(SNESConvergedReason) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESConvergedReason, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESConvergedReason) - 1 > 4 * PyLong_SHIFT) { return (SNESConvergedReason) ((((((((((SNESConvergedReason)digits[3]) << PyLong_SHIFT) | (SNESConvergedReason)digits[2]) << PyLong_SHIFT) | (SNESConvergedReason)digits[1]) << PyLong_SHIFT) | (SNESConvergedReason)digits[0]))); } } break; } #endif if (sizeof(SNESConvergedReason) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(SNESConvergedReason, long, PyLong_AsLong(x)) } else if (sizeof(SNESConvergedReason) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(SNESConvergedReason, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else SNESConvergedReason val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (SNESConvergedReason) -1; } } else { SNESConvergedReason val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (SNESConvergedReason) -1; val = __Pyx_PyInt_As_SNESConvergedReason(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to SNESConvergedReason"); return (SNESConvergedReason) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to SNESConvergedReason"); return (SNESConvergedReason) -1; } /* CIntFromPy */ static CYTHON_INLINE TaoConvergedReason __Pyx_PyInt_As_TaoConvergedReason(PyObject *x) { const TaoConvergedReason neg_one = (TaoConvergedReason) -1, const_zero = (TaoConvergedReason) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(TaoConvergedReason) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(TaoConvergedReason, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (TaoConvergedReason) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (TaoConvergedReason) 0; case 1: __PYX_VERIFY_RETURN_INT(TaoConvergedReason, digit, digits[0]) case 2: if (8 * sizeof(TaoConvergedReason) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TaoConvergedReason, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TaoConvergedReason) >= 2 * PyLong_SHIFT) { return (TaoConvergedReason) (((((TaoConvergedReason)digits[1]) << PyLong_SHIFT) | (TaoConvergedReason)digits[0])); } } break; case 3: if (8 * sizeof(TaoConvergedReason) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TaoConvergedReason, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TaoConvergedReason) >= 3 * PyLong_SHIFT) { return (TaoConvergedReason) (((((((TaoConvergedReason)digits[2]) << PyLong_SHIFT) | (TaoConvergedReason)digits[1]) << PyLong_SHIFT) | (TaoConvergedReason)digits[0])); } } break; case 4: if (8 * sizeof(TaoConvergedReason) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TaoConvergedReason, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TaoConvergedReason) >= 4 * PyLong_SHIFT) { return (TaoConvergedReason) (((((((((TaoConvergedReason)digits[3]) << PyLong_SHIFT) | (TaoConvergedReason)digits[2]) << PyLong_SHIFT) | (TaoConvergedReason)digits[1]) << PyLong_SHIFT) | (TaoConvergedReason)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (TaoConvergedReason) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(TaoConvergedReason) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(TaoConvergedReason, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(TaoConvergedReason) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(TaoConvergedReason, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (TaoConvergedReason) 0; case -1: __PYX_VERIFY_RETURN_INT(TaoConvergedReason, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(TaoConvergedReason, digit, +digits[0]) case -2: if (8 * sizeof(TaoConvergedReason) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TaoConvergedReason, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TaoConvergedReason) - 1 > 2 * PyLong_SHIFT) { return (TaoConvergedReason) (((TaoConvergedReason)-1)*(((((TaoConvergedReason)digits[1]) << PyLong_SHIFT) | (TaoConvergedReason)digits[0]))); } } break; case 2: if (8 * sizeof(TaoConvergedReason) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TaoConvergedReason, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TaoConvergedReason) - 1 > 2 * PyLong_SHIFT) { return (TaoConvergedReason) ((((((TaoConvergedReason)digits[1]) << PyLong_SHIFT) | (TaoConvergedReason)digits[0]))); } } break; case -3: if (8 * sizeof(TaoConvergedReason) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TaoConvergedReason, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TaoConvergedReason) - 1 > 3 * PyLong_SHIFT) { return (TaoConvergedReason) (((TaoConvergedReason)-1)*(((((((TaoConvergedReason)digits[2]) << PyLong_SHIFT) | (TaoConvergedReason)digits[1]) << PyLong_SHIFT) | (TaoConvergedReason)digits[0]))); } } break; case 3: if (8 * sizeof(TaoConvergedReason) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TaoConvergedReason, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TaoConvergedReason) - 1 > 3 * PyLong_SHIFT) { return (TaoConvergedReason) ((((((((TaoConvergedReason)digits[2]) << PyLong_SHIFT) | (TaoConvergedReason)digits[1]) << PyLong_SHIFT) | (TaoConvergedReason)digits[0]))); } } break; case -4: if (8 * sizeof(TaoConvergedReason) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TaoConvergedReason, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TaoConvergedReason) - 1 > 4 * PyLong_SHIFT) { return (TaoConvergedReason) (((TaoConvergedReason)-1)*(((((((((TaoConvergedReason)digits[3]) << PyLong_SHIFT) | (TaoConvergedReason)digits[2]) << PyLong_SHIFT) | (TaoConvergedReason)digits[1]) << PyLong_SHIFT) | (TaoConvergedReason)digits[0]))); } } break; case 4: if (8 * sizeof(TaoConvergedReason) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TaoConvergedReason, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TaoConvergedReason) - 1 > 4 * PyLong_SHIFT) { return (TaoConvergedReason) ((((((((((TaoConvergedReason)digits[3]) << PyLong_SHIFT) | (TaoConvergedReason)digits[2]) << PyLong_SHIFT) | (TaoConvergedReason)digits[1]) << PyLong_SHIFT) | (TaoConvergedReason)digits[0]))); } } break; } #endif if (sizeof(TaoConvergedReason) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(TaoConvergedReason, long, PyLong_AsLong(x)) } else if (sizeof(TaoConvergedReason) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(TaoConvergedReason, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else TaoConvergedReason val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (TaoConvergedReason) -1; } } else { TaoConvergedReason val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (TaoConvergedReason) -1; val = __Pyx_PyInt_As_TaoConvergedReason(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to TaoConvergedReason"); return (TaoConvergedReason) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to TaoConvergedReason"); return (TaoConvergedReason) -1; } /* CIntFromPy */ static CYTHON_INLINE DMBoundaryType __Pyx_PyInt_As_DMBoundaryType(PyObject *x) { const DMBoundaryType neg_one = (DMBoundaryType) -1, const_zero = (DMBoundaryType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(DMBoundaryType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(DMBoundaryType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (DMBoundaryType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (DMBoundaryType) 0; case 1: __PYX_VERIFY_RETURN_INT(DMBoundaryType, digit, digits[0]) case 2: if (8 * sizeof(DMBoundaryType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMBoundaryType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMBoundaryType) >= 2 * PyLong_SHIFT) { return (DMBoundaryType) (((((DMBoundaryType)digits[1]) << PyLong_SHIFT) | (DMBoundaryType)digits[0])); } } break; case 3: if (8 * sizeof(DMBoundaryType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMBoundaryType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMBoundaryType) >= 3 * PyLong_SHIFT) { return (DMBoundaryType) (((((((DMBoundaryType)digits[2]) << PyLong_SHIFT) | (DMBoundaryType)digits[1]) << PyLong_SHIFT) | (DMBoundaryType)digits[0])); } } break; case 4: if (8 * sizeof(DMBoundaryType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMBoundaryType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMBoundaryType) >= 4 * PyLong_SHIFT) { return (DMBoundaryType) (((((((((DMBoundaryType)digits[3]) << PyLong_SHIFT) | (DMBoundaryType)digits[2]) << PyLong_SHIFT) | (DMBoundaryType)digits[1]) << PyLong_SHIFT) | (DMBoundaryType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (DMBoundaryType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(DMBoundaryType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(DMBoundaryType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(DMBoundaryType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(DMBoundaryType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (DMBoundaryType) 0; case -1: __PYX_VERIFY_RETURN_INT(DMBoundaryType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(DMBoundaryType, digit, +digits[0]) case -2: if (8 * sizeof(DMBoundaryType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMBoundaryType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMBoundaryType) - 1 > 2 * PyLong_SHIFT) { return (DMBoundaryType) (((DMBoundaryType)-1)*(((((DMBoundaryType)digits[1]) << PyLong_SHIFT) | (DMBoundaryType)digits[0]))); } } break; case 2: if (8 * sizeof(DMBoundaryType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMBoundaryType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMBoundaryType) - 1 > 2 * PyLong_SHIFT) { return (DMBoundaryType) ((((((DMBoundaryType)digits[1]) << PyLong_SHIFT) | (DMBoundaryType)digits[0]))); } } break; case -3: if (8 * sizeof(DMBoundaryType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMBoundaryType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMBoundaryType) - 1 > 3 * PyLong_SHIFT) { return (DMBoundaryType) (((DMBoundaryType)-1)*(((((((DMBoundaryType)digits[2]) << PyLong_SHIFT) | (DMBoundaryType)digits[1]) << PyLong_SHIFT) | (DMBoundaryType)digits[0]))); } } break; case 3: if (8 * sizeof(DMBoundaryType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMBoundaryType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMBoundaryType) - 1 > 3 * PyLong_SHIFT) { return (DMBoundaryType) ((((((((DMBoundaryType)digits[2]) << PyLong_SHIFT) | (DMBoundaryType)digits[1]) << PyLong_SHIFT) | (DMBoundaryType)digits[0]))); } } break; case -4: if (8 * sizeof(DMBoundaryType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMBoundaryType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMBoundaryType) - 1 > 4 * PyLong_SHIFT) { return (DMBoundaryType) (((DMBoundaryType)-1)*(((((((((DMBoundaryType)digits[3]) << PyLong_SHIFT) | (DMBoundaryType)digits[2]) << PyLong_SHIFT) | (DMBoundaryType)digits[1]) << PyLong_SHIFT) | (DMBoundaryType)digits[0]))); } } break; case 4: if (8 * sizeof(DMBoundaryType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMBoundaryType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMBoundaryType) - 1 > 4 * PyLong_SHIFT) { return (DMBoundaryType) ((((((((((DMBoundaryType)digits[3]) << PyLong_SHIFT) | (DMBoundaryType)digits[2]) << PyLong_SHIFT) | (DMBoundaryType)digits[1]) << PyLong_SHIFT) | (DMBoundaryType)digits[0]))); } } break; } #endif if (sizeof(DMBoundaryType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(DMBoundaryType, long, PyLong_AsLong(x)) } else if (sizeof(DMBoundaryType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(DMBoundaryType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else DMBoundaryType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (DMBoundaryType) -1; } } else { DMBoundaryType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (DMBoundaryType) -1; val = __Pyx_PyInt_As_DMBoundaryType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to DMBoundaryType"); return (DMBoundaryType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to DMBoundaryType"); return (DMBoundaryType) -1; } /* CIntFromPy */ static CYTHON_INLINE DMDAStencilType __Pyx_PyInt_As_DMDAStencilType(PyObject *x) { const DMDAStencilType neg_one = (DMDAStencilType) -1, const_zero = (DMDAStencilType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(DMDAStencilType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(DMDAStencilType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (DMDAStencilType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (DMDAStencilType) 0; case 1: __PYX_VERIFY_RETURN_INT(DMDAStencilType, digit, digits[0]) case 2: if (8 * sizeof(DMDAStencilType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAStencilType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAStencilType) >= 2 * PyLong_SHIFT) { return (DMDAStencilType) (((((DMDAStencilType)digits[1]) << PyLong_SHIFT) | (DMDAStencilType)digits[0])); } } break; case 3: if (8 * sizeof(DMDAStencilType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAStencilType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAStencilType) >= 3 * PyLong_SHIFT) { return (DMDAStencilType) (((((((DMDAStencilType)digits[2]) << PyLong_SHIFT) | (DMDAStencilType)digits[1]) << PyLong_SHIFT) | (DMDAStencilType)digits[0])); } } break; case 4: if (8 * sizeof(DMDAStencilType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAStencilType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAStencilType) >= 4 * PyLong_SHIFT) { return (DMDAStencilType) (((((((((DMDAStencilType)digits[3]) << PyLong_SHIFT) | (DMDAStencilType)digits[2]) << PyLong_SHIFT) | (DMDAStencilType)digits[1]) << PyLong_SHIFT) | (DMDAStencilType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (DMDAStencilType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(DMDAStencilType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(DMDAStencilType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(DMDAStencilType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(DMDAStencilType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (DMDAStencilType) 0; case -1: __PYX_VERIFY_RETURN_INT(DMDAStencilType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(DMDAStencilType, digit, +digits[0]) case -2: if (8 * sizeof(DMDAStencilType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAStencilType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAStencilType) - 1 > 2 * PyLong_SHIFT) { return (DMDAStencilType) (((DMDAStencilType)-1)*(((((DMDAStencilType)digits[1]) << PyLong_SHIFT) | (DMDAStencilType)digits[0]))); } } break; case 2: if (8 * sizeof(DMDAStencilType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAStencilType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAStencilType) - 1 > 2 * PyLong_SHIFT) { return (DMDAStencilType) ((((((DMDAStencilType)digits[1]) << PyLong_SHIFT) | (DMDAStencilType)digits[0]))); } } break; case -3: if (8 * sizeof(DMDAStencilType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAStencilType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAStencilType) - 1 > 3 * PyLong_SHIFT) { return (DMDAStencilType) (((DMDAStencilType)-1)*(((((((DMDAStencilType)digits[2]) << PyLong_SHIFT) | (DMDAStencilType)digits[1]) << PyLong_SHIFT) | (DMDAStencilType)digits[0]))); } } break; case 3: if (8 * sizeof(DMDAStencilType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAStencilType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAStencilType) - 1 > 3 * PyLong_SHIFT) { return (DMDAStencilType) ((((((((DMDAStencilType)digits[2]) << PyLong_SHIFT) | (DMDAStencilType)digits[1]) << PyLong_SHIFT) | (DMDAStencilType)digits[0]))); } } break; case -4: if (8 * sizeof(DMDAStencilType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAStencilType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAStencilType) - 1 > 4 * PyLong_SHIFT) { return (DMDAStencilType) (((DMDAStencilType)-1)*(((((((((DMDAStencilType)digits[3]) << PyLong_SHIFT) | (DMDAStencilType)digits[2]) << PyLong_SHIFT) | (DMDAStencilType)digits[1]) << PyLong_SHIFT) | (DMDAStencilType)digits[0]))); } } break; case 4: if (8 * sizeof(DMDAStencilType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAStencilType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAStencilType) - 1 > 4 * PyLong_SHIFT) { return (DMDAStencilType) ((((((((((DMDAStencilType)digits[3]) << PyLong_SHIFT) | (DMDAStencilType)digits[2]) << PyLong_SHIFT) | (DMDAStencilType)digits[1]) << PyLong_SHIFT) | (DMDAStencilType)digits[0]))); } } break; } #endif if (sizeof(DMDAStencilType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(DMDAStencilType, long, PyLong_AsLong(x)) } else if (sizeof(DMDAStencilType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(DMDAStencilType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else DMDAStencilType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (DMDAStencilType) -1; } } else { DMDAStencilType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (DMDAStencilType) -1; val = __Pyx_PyInt_As_DMDAStencilType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to DMDAStencilType"); return (DMDAStencilType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to DMDAStencilType"); return (DMDAStencilType) -1; } /* CIntFromPy */ static CYTHON_INLINE DMDAInterpolationType __Pyx_PyInt_As_DMDAInterpolationType(PyObject *x) { const DMDAInterpolationType neg_one = (DMDAInterpolationType) -1, const_zero = (DMDAInterpolationType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(DMDAInterpolationType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (DMDAInterpolationType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (DMDAInterpolationType) 0; case 1: __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, digit, digits[0]) case 2: if (8 * sizeof(DMDAInterpolationType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAInterpolationType) >= 2 * PyLong_SHIFT) { return (DMDAInterpolationType) (((((DMDAInterpolationType)digits[1]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[0])); } } break; case 3: if (8 * sizeof(DMDAInterpolationType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAInterpolationType) >= 3 * PyLong_SHIFT) { return (DMDAInterpolationType) (((((((DMDAInterpolationType)digits[2]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[1]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[0])); } } break; case 4: if (8 * sizeof(DMDAInterpolationType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAInterpolationType) >= 4 * PyLong_SHIFT) { return (DMDAInterpolationType) (((((((((DMDAInterpolationType)digits[3]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[2]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[1]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (DMDAInterpolationType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(DMDAInterpolationType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(DMDAInterpolationType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(DMDAInterpolationType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(DMDAInterpolationType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (DMDAInterpolationType) 0; case -1: __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, digit, +digits[0]) case -2: if (8 * sizeof(DMDAInterpolationType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAInterpolationType) - 1 > 2 * PyLong_SHIFT) { return (DMDAInterpolationType) (((DMDAInterpolationType)-1)*(((((DMDAInterpolationType)digits[1]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[0]))); } } break; case 2: if (8 * sizeof(DMDAInterpolationType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAInterpolationType) - 1 > 2 * PyLong_SHIFT) { return (DMDAInterpolationType) ((((((DMDAInterpolationType)digits[1]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[0]))); } } break; case -3: if (8 * sizeof(DMDAInterpolationType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAInterpolationType) - 1 > 3 * PyLong_SHIFT) { return (DMDAInterpolationType) (((DMDAInterpolationType)-1)*(((((((DMDAInterpolationType)digits[2]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[1]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[0]))); } } break; case 3: if (8 * sizeof(DMDAInterpolationType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAInterpolationType) - 1 > 3 * PyLong_SHIFT) { return (DMDAInterpolationType) ((((((((DMDAInterpolationType)digits[2]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[1]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[0]))); } } break; case -4: if (8 * sizeof(DMDAInterpolationType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAInterpolationType) - 1 > 4 * PyLong_SHIFT) { return (DMDAInterpolationType) (((DMDAInterpolationType)-1)*(((((((((DMDAInterpolationType)digits[3]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[2]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[1]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[0]))); } } break; case 4: if (8 * sizeof(DMDAInterpolationType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAInterpolationType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAInterpolationType) - 1 > 4 * PyLong_SHIFT) { return (DMDAInterpolationType) ((((((((((DMDAInterpolationType)digits[3]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[2]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[1]) << PyLong_SHIFT) | (DMDAInterpolationType)digits[0]))); } } break; } #endif if (sizeof(DMDAInterpolationType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(DMDAInterpolationType, long, PyLong_AsLong(x)) } else if (sizeof(DMDAInterpolationType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(DMDAInterpolationType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else DMDAInterpolationType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (DMDAInterpolationType) -1; } } else { DMDAInterpolationType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (DMDAInterpolationType) -1; val = __Pyx_PyInt_As_DMDAInterpolationType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to DMDAInterpolationType"); return (DMDAInterpolationType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to DMDAInterpolationType"); return (DMDAInterpolationType) -1; } /* CIntFromPy */ static CYTHON_INLINE DMDAElementType __Pyx_PyInt_As_DMDAElementType(PyObject *x) { const DMDAElementType neg_one = (DMDAElementType) -1, const_zero = (DMDAElementType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(DMDAElementType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(DMDAElementType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (DMDAElementType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (DMDAElementType) 0; case 1: __PYX_VERIFY_RETURN_INT(DMDAElementType, digit, digits[0]) case 2: if (8 * sizeof(DMDAElementType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAElementType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAElementType) >= 2 * PyLong_SHIFT) { return (DMDAElementType) (((((DMDAElementType)digits[1]) << PyLong_SHIFT) | (DMDAElementType)digits[0])); } } break; case 3: if (8 * sizeof(DMDAElementType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAElementType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAElementType) >= 3 * PyLong_SHIFT) { return (DMDAElementType) (((((((DMDAElementType)digits[2]) << PyLong_SHIFT) | (DMDAElementType)digits[1]) << PyLong_SHIFT) | (DMDAElementType)digits[0])); } } break; case 4: if (8 * sizeof(DMDAElementType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAElementType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAElementType) >= 4 * PyLong_SHIFT) { return (DMDAElementType) (((((((((DMDAElementType)digits[3]) << PyLong_SHIFT) | (DMDAElementType)digits[2]) << PyLong_SHIFT) | (DMDAElementType)digits[1]) << PyLong_SHIFT) | (DMDAElementType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (DMDAElementType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(DMDAElementType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(DMDAElementType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(DMDAElementType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(DMDAElementType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (DMDAElementType) 0; case -1: __PYX_VERIFY_RETURN_INT(DMDAElementType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(DMDAElementType, digit, +digits[0]) case -2: if (8 * sizeof(DMDAElementType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAElementType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAElementType) - 1 > 2 * PyLong_SHIFT) { return (DMDAElementType) (((DMDAElementType)-1)*(((((DMDAElementType)digits[1]) << PyLong_SHIFT) | (DMDAElementType)digits[0]))); } } break; case 2: if (8 * sizeof(DMDAElementType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAElementType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAElementType) - 1 > 2 * PyLong_SHIFT) { return (DMDAElementType) ((((((DMDAElementType)digits[1]) << PyLong_SHIFT) | (DMDAElementType)digits[0]))); } } break; case -3: if (8 * sizeof(DMDAElementType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAElementType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAElementType) - 1 > 3 * PyLong_SHIFT) { return (DMDAElementType) (((DMDAElementType)-1)*(((((((DMDAElementType)digits[2]) << PyLong_SHIFT) | (DMDAElementType)digits[1]) << PyLong_SHIFT) | (DMDAElementType)digits[0]))); } } break; case 3: if (8 * sizeof(DMDAElementType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAElementType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAElementType) - 1 > 3 * PyLong_SHIFT) { return (DMDAElementType) ((((((((DMDAElementType)digits[2]) << PyLong_SHIFT) | (DMDAElementType)digits[1]) << PyLong_SHIFT) | (DMDAElementType)digits[0]))); } } break; case -4: if (8 * sizeof(DMDAElementType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAElementType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAElementType) - 1 > 4 * PyLong_SHIFT) { return (DMDAElementType) (((DMDAElementType)-1)*(((((((((DMDAElementType)digits[3]) << PyLong_SHIFT) | (DMDAElementType)digits[2]) << PyLong_SHIFT) | (DMDAElementType)digits[1]) << PyLong_SHIFT) | (DMDAElementType)digits[0]))); } } break; case 4: if (8 * sizeof(DMDAElementType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(DMDAElementType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(DMDAElementType) - 1 > 4 * PyLong_SHIFT) { return (DMDAElementType) ((((((((((DMDAElementType)digits[3]) << PyLong_SHIFT) | (DMDAElementType)digits[2]) << PyLong_SHIFT) | (DMDAElementType)digits[1]) << PyLong_SHIFT) | (DMDAElementType)digits[0]))); } } break; } #endif if (sizeof(DMDAElementType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(DMDAElementType, long, PyLong_AsLong(x)) } else if (sizeof(DMDAElementType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(DMDAElementType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else DMDAElementType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (DMDAElementType) -1; } } else { DMDAElementType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (DMDAElementType) -1; val = __Pyx_PyInt_As_DMDAElementType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to DMDAElementType"); return (DMDAElementType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to DMDAElementType"); return (DMDAElementType) -1; } /* CIntFromPy */ static CYTHON_INLINE PetscClassId __Pyx_PyInt_As_PetscClassId(PyObject *x) { const PetscClassId neg_one = (PetscClassId) -1, const_zero = (PetscClassId) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PetscClassId) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PetscClassId, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PetscClassId) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PetscClassId) 0; case 1: __PYX_VERIFY_RETURN_INT(PetscClassId, digit, digits[0]) case 2: if (8 * sizeof(PetscClassId) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscClassId, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscClassId) >= 2 * PyLong_SHIFT) { return (PetscClassId) (((((PetscClassId)digits[1]) << PyLong_SHIFT) | (PetscClassId)digits[0])); } } break; case 3: if (8 * sizeof(PetscClassId) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscClassId, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscClassId) >= 3 * PyLong_SHIFT) { return (PetscClassId) (((((((PetscClassId)digits[2]) << PyLong_SHIFT) | (PetscClassId)digits[1]) << PyLong_SHIFT) | (PetscClassId)digits[0])); } } break; case 4: if (8 * sizeof(PetscClassId) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscClassId, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscClassId) >= 4 * PyLong_SHIFT) { return (PetscClassId) (((((((((PetscClassId)digits[3]) << PyLong_SHIFT) | (PetscClassId)digits[2]) << PyLong_SHIFT) | (PetscClassId)digits[1]) << PyLong_SHIFT) | (PetscClassId)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PetscClassId) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PetscClassId) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PetscClassId, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PetscClassId) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PetscClassId, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PetscClassId) 0; case -1: __PYX_VERIFY_RETURN_INT(PetscClassId, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PetscClassId, digit, +digits[0]) case -2: if (8 * sizeof(PetscClassId) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscClassId, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscClassId) - 1 > 2 * PyLong_SHIFT) { return (PetscClassId) (((PetscClassId)-1)*(((((PetscClassId)digits[1]) << PyLong_SHIFT) | (PetscClassId)digits[0]))); } } break; case 2: if (8 * sizeof(PetscClassId) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscClassId, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscClassId) - 1 > 2 * PyLong_SHIFT) { return (PetscClassId) ((((((PetscClassId)digits[1]) << PyLong_SHIFT) | (PetscClassId)digits[0]))); } } break; case -3: if (8 * sizeof(PetscClassId) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscClassId, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscClassId) - 1 > 3 * PyLong_SHIFT) { return (PetscClassId) (((PetscClassId)-1)*(((((((PetscClassId)digits[2]) << PyLong_SHIFT) | (PetscClassId)digits[1]) << PyLong_SHIFT) | (PetscClassId)digits[0]))); } } break; case 3: if (8 * sizeof(PetscClassId) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscClassId, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscClassId) - 1 > 3 * PyLong_SHIFT) { return (PetscClassId) ((((((((PetscClassId)digits[2]) << PyLong_SHIFT) | (PetscClassId)digits[1]) << PyLong_SHIFT) | (PetscClassId)digits[0]))); } } break; case -4: if (8 * sizeof(PetscClassId) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscClassId, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscClassId) - 1 > 4 * PyLong_SHIFT) { return (PetscClassId) (((PetscClassId)-1)*(((((((((PetscClassId)digits[3]) << PyLong_SHIFT) | (PetscClassId)digits[2]) << PyLong_SHIFT) | (PetscClassId)digits[1]) << PyLong_SHIFT) | (PetscClassId)digits[0]))); } } break; case 4: if (8 * sizeof(PetscClassId) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscClassId, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscClassId) - 1 > 4 * PyLong_SHIFT) { return (PetscClassId) ((((((((((PetscClassId)digits[3]) << PyLong_SHIFT) | (PetscClassId)digits[2]) << PyLong_SHIFT) | (PetscClassId)digits[1]) << PyLong_SHIFT) | (PetscClassId)digits[0]))); } } break; } #endif if (sizeof(PetscClassId) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PetscClassId, long, PyLong_AsLong(x)) } else if (sizeof(PetscClassId) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PetscClassId, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PetscClassId val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PetscClassId) -1; } } else { PetscClassId val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PetscClassId) -1; val = __Pyx_PyInt_As_PetscClassId(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PetscClassId"); return (PetscClassId) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PetscClassId"); return (PetscClassId) -1; } /* CIntFromPy */ static CYTHON_INLINE PetscViewerFormat __Pyx_PyInt_As_PetscViewerFormat(PyObject *x) { const PetscViewerFormat neg_one = (PetscViewerFormat) -1, const_zero = (PetscViewerFormat) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PetscViewerFormat) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PetscViewerFormat, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PetscViewerFormat) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PetscViewerFormat) 0; case 1: __PYX_VERIFY_RETURN_INT(PetscViewerFormat, digit, digits[0]) case 2: if (8 * sizeof(PetscViewerFormat) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscViewerFormat, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscViewerFormat) >= 2 * PyLong_SHIFT) { return (PetscViewerFormat) (((((PetscViewerFormat)digits[1]) << PyLong_SHIFT) | (PetscViewerFormat)digits[0])); } } break; case 3: if (8 * sizeof(PetscViewerFormat) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscViewerFormat, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscViewerFormat) >= 3 * PyLong_SHIFT) { return (PetscViewerFormat) (((((((PetscViewerFormat)digits[2]) << PyLong_SHIFT) | (PetscViewerFormat)digits[1]) << PyLong_SHIFT) | (PetscViewerFormat)digits[0])); } } break; case 4: if (8 * sizeof(PetscViewerFormat) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscViewerFormat, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscViewerFormat) >= 4 * PyLong_SHIFT) { return (PetscViewerFormat) (((((((((PetscViewerFormat)digits[3]) << PyLong_SHIFT) | (PetscViewerFormat)digits[2]) << PyLong_SHIFT) | (PetscViewerFormat)digits[1]) << PyLong_SHIFT) | (PetscViewerFormat)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PetscViewerFormat) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PetscViewerFormat) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PetscViewerFormat, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PetscViewerFormat) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PetscViewerFormat, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PetscViewerFormat) 0; case -1: __PYX_VERIFY_RETURN_INT(PetscViewerFormat, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PetscViewerFormat, digit, +digits[0]) case -2: if (8 * sizeof(PetscViewerFormat) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscViewerFormat, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscViewerFormat) - 1 > 2 * PyLong_SHIFT) { return (PetscViewerFormat) (((PetscViewerFormat)-1)*(((((PetscViewerFormat)digits[1]) << PyLong_SHIFT) | (PetscViewerFormat)digits[0]))); } } break; case 2: if (8 * sizeof(PetscViewerFormat) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscViewerFormat, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscViewerFormat) - 1 > 2 * PyLong_SHIFT) { return (PetscViewerFormat) ((((((PetscViewerFormat)digits[1]) << PyLong_SHIFT) | (PetscViewerFormat)digits[0]))); } } break; case -3: if (8 * sizeof(PetscViewerFormat) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscViewerFormat, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscViewerFormat) - 1 > 3 * PyLong_SHIFT) { return (PetscViewerFormat) (((PetscViewerFormat)-1)*(((((((PetscViewerFormat)digits[2]) << PyLong_SHIFT) | (PetscViewerFormat)digits[1]) << PyLong_SHIFT) | (PetscViewerFormat)digits[0]))); } } break; case 3: if (8 * sizeof(PetscViewerFormat) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscViewerFormat, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscViewerFormat) - 1 > 3 * PyLong_SHIFT) { return (PetscViewerFormat) ((((((((PetscViewerFormat)digits[2]) << PyLong_SHIFT) | (PetscViewerFormat)digits[1]) << PyLong_SHIFT) | (PetscViewerFormat)digits[0]))); } } break; case -4: if (8 * sizeof(PetscViewerFormat) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscViewerFormat, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscViewerFormat) - 1 > 4 * PyLong_SHIFT) { return (PetscViewerFormat) (((PetscViewerFormat)-1)*(((((((((PetscViewerFormat)digits[3]) << PyLong_SHIFT) | (PetscViewerFormat)digits[2]) << PyLong_SHIFT) | (PetscViewerFormat)digits[1]) << PyLong_SHIFT) | (PetscViewerFormat)digits[0]))); } } break; case 4: if (8 * sizeof(PetscViewerFormat) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscViewerFormat, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscViewerFormat) - 1 > 4 * PyLong_SHIFT) { return (PetscViewerFormat) ((((((((((PetscViewerFormat)digits[3]) << PyLong_SHIFT) | (PetscViewerFormat)digits[2]) << PyLong_SHIFT) | (PetscViewerFormat)digits[1]) << PyLong_SHIFT) | (PetscViewerFormat)digits[0]))); } } break; } #endif if (sizeof(PetscViewerFormat) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PetscViewerFormat, long, PyLong_AsLong(x)) } else if (sizeof(PetscViewerFormat) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PetscViewerFormat, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PetscViewerFormat val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PetscViewerFormat) -1; } } else { PetscViewerFormat val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PetscViewerFormat) -1; val = __Pyx_PyInt_As_PetscViewerFormat(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PetscViewerFormat"); return (PetscViewerFormat) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PetscViewerFormat"); return (PetscViewerFormat) -1; } /* CIntFromPy */ static CYTHON_INLINE unsigned long __Pyx_PyInt_As_unsigned_long(PyObject *x) { const unsigned long neg_one = (unsigned long) -1, const_zero = (unsigned long) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(unsigned long) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(unsigned long, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (unsigned long) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (unsigned long) 0; case 1: __PYX_VERIFY_RETURN_INT(unsigned long, digit, digits[0]) case 2: if (8 * sizeof(unsigned long) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(unsigned long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(unsigned long) >= 2 * PyLong_SHIFT) { return (unsigned long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); } } break; case 3: if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(unsigned long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(unsigned long) >= 3 * PyLong_SHIFT) { return (unsigned long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); } } break; case 4: if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(unsigned long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(unsigned long) >= 4 * PyLong_SHIFT) { return (unsigned long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (unsigned long) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(unsigned long) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(unsigned long, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(unsigned long) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(unsigned long, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (unsigned long) 0; case -1: __PYX_VERIFY_RETURN_INT(unsigned long, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(unsigned long, digit, +digits[0]) case -2: if (8 * sizeof(unsigned long) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(unsigned long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(unsigned long) - 1 > 2 * PyLong_SHIFT) { return (unsigned long) (((unsigned long)-1)*(((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))); } } break; case 2: if (8 * sizeof(unsigned long) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(unsigned long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(unsigned long) - 1 > 2 * PyLong_SHIFT) { return (unsigned long) ((((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))); } } break; case -3: if (8 * sizeof(unsigned long) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(unsigned long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(unsigned long) - 1 > 3 * PyLong_SHIFT) { return (unsigned long) (((unsigned long)-1)*(((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))); } } break; case 3: if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(unsigned long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(unsigned long) - 1 > 3 * PyLong_SHIFT) { return (unsigned long) ((((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))); } } break; case -4: if (8 * sizeof(unsigned long) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(unsigned long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(unsigned long) - 1 > 4 * PyLong_SHIFT) { return (unsigned long) (((unsigned long)-1)*(((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))); } } break; case 4: if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(unsigned long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(unsigned long) - 1 > 4 * PyLong_SHIFT) { return (unsigned long) ((((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))); } } break; } #endif if (sizeof(unsigned long) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(unsigned long, long, PyLong_AsLong(x)) } else if (sizeof(unsigned long) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(unsigned long, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else unsigned long val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (unsigned long) -1; } } else { unsigned long val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (unsigned long) -1; val = __Pyx_PyInt_As_unsigned_long(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to unsigned long"); return (unsigned long) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to unsigned long"); return (unsigned long) -1; } /* CIntFromPy */ static CYTHON_INLINE PetscBool __Pyx_PyInt_As_PetscBool(PyObject *x) { const PetscBool neg_one = (PetscBool) -1, const_zero = (PetscBool) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PetscBool) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PetscBool, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PetscBool) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PetscBool) 0; case 1: __PYX_VERIFY_RETURN_INT(PetscBool, digit, digits[0]) case 2: if (8 * sizeof(PetscBool) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscBool, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscBool) >= 2 * PyLong_SHIFT) { return (PetscBool) (((((PetscBool)digits[1]) << PyLong_SHIFT) | (PetscBool)digits[0])); } } break; case 3: if (8 * sizeof(PetscBool) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscBool, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscBool) >= 3 * PyLong_SHIFT) { return (PetscBool) (((((((PetscBool)digits[2]) << PyLong_SHIFT) | (PetscBool)digits[1]) << PyLong_SHIFT) | (PetscBool)digits[0])); } } break; case 4: if (8 * sizeof(PetscBool) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscBool, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscBool) >= 4 * PyLong_SHIFT) { return (PetscBool) (((((((((PetscBool)digits[3]) << PyLong_SHIFT) | (PetscBool)digits[2]) << PyLong_SHIFT) | (PetscBool)digits[1]) << PyLong_SHIFT) | (PetscBool)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PetscBool) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PetscBool) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PetscBool, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PetscBool) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PetscBool, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PetscBool) 0; case -1: __PYX_VERIFY_RETURN_INT(PetscBool, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PetscBool, digit, +digits[0]) case -2: if (8 * sizeof(PetscBool) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscBool, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscBool) - 1 > 2 * PyLong_SHIFT) { return (PetscBool) (((PetscBool)-1)*(((((PetscBool)digits[1]) << PyLong_SHIFT) | (PetscBool)digits[0]))); } } break; case 2: if (8 * sizeof(PetscBool) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscBool, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscBool) - 1 > 2 * PyLong_SHIFT) { return (PetscBool) ((((((PetscBool)digits[1]) << PyLong_SHIFT) | (PetscBool)digits[0]))); } } break; case -3: if (8 * sizeof(PetscBool) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscBool, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscBool) - 1 > 3 * PyLong_SHIFT) { return (PetscBool) (((PetscBool)-1)*(((((((PetscBool)digits[2]) << PyLong_SHIFT) | (PetscBool)digits[1]) << PyLong_SHIFT) | (PetscBool)digits[0]))); } } break; case 3: if (8 * sizeof(PetscBool) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscBool, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscBool) - 1 > 3 * PyLong_SHIFT) { return (PetscBool) ((((((((PetscBool)digits[2]) << PyLong_SHIFT) | (PetscBool)digits[1]) << PyLong_SHIFT) | (PetscBool)digits[0]))); } } break; case -4: if (8 * sizeof(PetscBool) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscBool, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscBool) - 1 > 4 * PyLong_SHIFT) { return (PetscBool) (((PetscBool)-1)*(((((((((PetscBool)digits[3]) << PyLong_SHIFT) | (PetscBool)digits[2]) << PyLong_SHIFT) | (PetscBool)digits[1]) << PyLong_SHIFT) | (PetscBool)digits[0]))); } } break; case 4: if (8 * sizeof(PetscBool) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscBool, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscBool) - 1 > 4 * PyLong_SHIFT) { return (PetscBool) ((((((((((PetscBool)digits[3]) << PyLong_SHIFT) | (PetscBool)digits[2]) << PyLong_SHIFT) | (PetscBool)digits[1]) << PyLong_SHIFT) | (PetscBool)digits[0]))); } } break; } #endif if (sizeof(PetscBool) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PetscBool, long, PyLong_AsLong(x)) } else if (sizeof(PetscBool) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PetscBool, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PetscBool val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PetscBool) -1; } } else { PetscBool val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PetscBool) -1; val = __Pyx_PyInt_As_PetscBool(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PetscBool"); return (PetscBool) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PetscBool"); return (PetscBool) -1; } /* CIntFromPy */ static CYTHON_INLINE ISGlobalToLocalMappingType __Pyx_PyInt_As_ISGlobalToLocalMappingType(PyObject *x) { const ISGlobalToLocalMappingType neg_one = (ISGlobalToLocalMappingType) -1, const_zero = (ISGlobalToLocalMappingType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(ISGlobalToLocalMappingType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (ISGlobalToLocalMappingType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (ISGlobalToLocalMappingType) 0; case 1: __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, digit, digits[0]) case 2: if (8 * sizeof(ISGlobalToLocalMappingType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ISGlobalToLocalMappingType) >= 2 * PyLong_SHIFT) { return (ISGlobalToLocalMappingType) (((((ISGlobalToLocalMappingType)digits[1]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[0])); } } break; case 3: if (8 * sizeof(ISGlobalToLocalMappingType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ISGlobalToLocalMappingType) >= 3 * PyLong_SHIFT) { return (ISGlobalToLocalMappingType) (((((((ISGlobalToLocalMappingType)digits[2]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[1]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[0])); } } break; case 4: if (8 * sizeof(ISGlobalToLocalMappingType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ISGlobalToLocalMappingType) >= 4 * PyLong_SHIFT) { return (ISGlobalToLocalMappingType) (((((((((ISGlobalToLocalMappingType)digits[3]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[2]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[1]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (ISGlobalToLocalMappingType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(ISGlobalToLocalMappingType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(ISGlobalToLocalMappingType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(ISGlobalToLocalMappingType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(ISGlobalToLocalMappingType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (ISGlobalToLocalMappingType) 0; case -1: __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, digit, +digits[0]) case -2: if (8 * sizeof(ISGlobalToLocalMappingType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ISGlobalToLocalMappingType) - 1 > 2 * PyLong_SHIFT) { return (ISGlobalToLocalMappingType) (((ISGlobalToLocalMappingType)-1)*(((((ISGlobalToLocalMappingType)digits[1]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[0]))); } } break; case 2: if (8 * sizeof(ISGlobalToLocalMappingType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ISGlobalToLocalMappingType) - 1 > 2 * PyLong_SHIFT) { return (ISGlobalToLocalMappingType) ((((((ISGlobalToLocalMappingType)digits[1]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[0]))); } } break; case -3: if (8 * sizeof(ISGlobalToLocalMappingType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ISGlobalToLocalMappingType) - 1 > 3 * PyLong_SHIFT) { return (ISGlobalToLocalMappingType) (((ISGlobalToLocalMappingType)-1)*(((((((ISGlobalToLocalMappingType)digits[2]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[1]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[0]))); } } break; case 3: if (8 * sizeof(ISGlobalToLocalMappingType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ISGlobalToLocalMappingType) - 1 > 3 * PyLong_SHIFT) { return (ISGlobalToLocalMappingType) ((((((((ISGlobalToLocalMappingType)digits[2]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[1]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[0]))); } } break; case -4: if (8 * sizeof(ISGlobalToLocalMappingType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ISGlobalToLocalMappingType) - 1 > 4 * PyLong_SHIFT) { return (ISGlobalToLocalMappingType) (((ISGlobalToLocalMappingType)-1)*(((((((((ISGlobalToLocalMappingType)digits[3]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[2]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[1]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[0]))); } } break; case 4: if (8 * sizeof(ISGlobalToLocalMappingType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(ISGlobalToLocalMappingType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(ISGlobalToLocalMappingType) - 1 > 4 * PyLong_SHIFT) { return (ISGlobalToLocalMappingType) ((((((((((ISGlobalToLocalMappingType)digits[3]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[2]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[1]) << PyLong_SHIFT) | (ISGlobalToLocalMappingType)digits[0]))); } } break; } #endif if (sizeof(ISGlobalToLocalMappingType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(ISGlobalToLocalMappingType, long, PyLong_AsLong(x)) } else if (sizeof(ISGlobalToLocalMappingType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(ISGlobalToLocalMappingType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else ISGlobalToLocalMappingType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (ISGlobalToLocalMappingType) -1; } } else { ISGlobalToLocalMappingType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (ISGlobalToLocalMappingType) -1; val = __Pyx_PyInt_As_ISGlobalToLocalMappingType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to ISGlobalToLocalMappingType"); return (ISGlobalToLocalMappingType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to ISGlobalToLocalMappingType"); return (ISGlobalToLocalMappingType) -1; } /* CIntFromPy */ static CYTHON_INLINE VecOption __Pyx_PyInt_As_VecOption(PyObject *x) { const VecOption neg_one = (VecOption) -1, const_zero = (VecOption) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(VecOption) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(VecOption, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (VecOption) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (VecOption) 0; case 1: __PYX_VERIFY_RETURN_INT(VecOption, digit, digits[0]) case 2: if (8 * sizeof(VecOption) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(VecOption, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(VecOption) >= 2 * PyLong_SHIFT) { return (VecOption) (((((VecOption)digits[1]) << PyLong_SHIFT) | (VecOption)digits[0])); } } break; case 3: if (8 * sizeof(VecOption) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(VecOption, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(VecOption) >= 3 * PyLong_SHIFT) { return (VecOption) (((((((VecOption)digits[2]) << PyLong_SHIFT) | (VecOption)digits[1]) << PyLong_SHIFT) | (VecOption)digits[0])); } } break; case 4: if (8 * sizeof(VecOption) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(VecOption, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(VecOption) >= 4 * PyLong_SHIFT) { return (VecOption) (((((((((VecOption)digits[3]) << PyLong_SHIFT) | (VecOption)digits[2]) << PyLong_SHIFT) | (VecOption)digits[1]) << PyLong_SHIFT) | (VecOption)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (VecOption) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(VecOption) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(VecOption, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(VecOption) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(VecOption, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (VecOption) 0; case -1: __PYX_VERIFY_RETURN_INT(VecOption, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(VecOption, digit, +digits[0]) case -2: if (8 * sizeof(VecOption) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(VecOption, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(VecOption) - 1 > 2 * PyLong_SHIFT) { return (VecOption) (((VecOption)-1)*(((((VecOption)digits[1]) << PyLong_SHIFT) | (VecOption)digits[0]))); } } break; case 2: if (8 * sizeof(VecOption) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(VecOption, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(VecOption) - 1 > 2 * PyLong_SHIFT) { return (VecOption) ((((((VecOption)digits[1]) << PyLong_SHIFT) | (VecOption)digits[0]))); } } break; case -3: if (8 * sizeof(VecOption) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(VecOption, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(VecOption) - 1 > 3 * PyLong_SHIFT) { return (VecOption) (((VecOption)-1)*(((((((VecOption)digits[2]) << PyLong_SHIFT) | (VecOption)digits[1]) << PyLong_SHIFT) | (VecOption)digits[0]))); } } break; case 3: if (8 * sizeof(VecOption) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(VecOption, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(VecOption) - 1 > 3 * PyLong_SHIFT) { return (VecOption) ((((((((VecOption)digits[2]) << PyLong_SHIFT) | (VecOption)digits[1]) << PyLong_SHIFT) | (VecOption)digits[0]))); } } break; case -4: if (8 * sizeof(VecOption) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(VecOption, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(VecOption) - 1 > 4 * PyLong_SHIFT) { return (VecOption) (((VecOption)-1)*(((((((((VecOption)digits[3]) << PyLong_SHIFT) | (VecOption)digits[2]) << PyLong_SHIFT) | (VecOption)digits[1]) << PyLong_SHIFT) | (VecOption)digits[0]))); } } break; case 4: if (8 * sizeof(VecOption) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(VecOption, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(VecOption) - 1 > 4 * PyLong_SHIFT) { return (VecOption) ((((((((((VecOption)digits[3]) << PyLong_SHIFT) | (VecOption)digits[2]) << PyLong_SHIFT) | (VecOption)digits[1]) << PyLong_SHIFT) | (VecOption)digits[0]))); } } break; } #endif if (sizeof(VecOption) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(VecOption, long, PyLong_AsLong(x)) } else if (sizeof(VecOption) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(VecOption, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else VecOption val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (VecOption) -1; } } else { VecOption val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (VecOption) -1; val = __Pyx_PyInt_As_VecOption(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to VecOption"); return (VecOption) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to VecOption"); return (VecOption) -1; } /* CIntFromPy */ static CYTHON_INLINE size_t __Pyx_PyInt_As_size_t(PyObject *x) { const size_t neg_one = (size_t) -1, const_zero = (size_t) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(size_t) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(size_t, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (size_t) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (size_t) 0; case 1: __PYX_VERIFY_RETURN_INT(size_t, digit, digits[0]) case 2: if (8 * sizeof(size_t) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(size_t, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(size_t) >= 2 * PyLong_SHIFT) { return (size_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } } break; case 3: if (8 * sizeof(size_t) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(size_t, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(size_t) >= 3 * PyLong_SHIFT) { return (size_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } } break; case 4: if (8 * sizeof(size_t) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(size_t, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(size_t) >= 4 * PyLong_SHIFT) { return (size_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (size_t) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(size_t) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(size_t, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(size_t) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(size_t, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (size_t) 0; case -1: __PYX_VERIFY_RETURN_INT(size_t, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(size_t, digit, +digits[0]) case -2: if (8 * sizeof(size_t) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(size_t, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(size_t) - 1 > 2 * PyLong_SHIFT) { return (size_t) (((size_t)-1)*(((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]))); } } break; case 2: if (8 * sizeof(size_t) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(size_t, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(size_t) - 1 > 2 * PyLong_SHIFT) { return (size_t) ((((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]))); } } break; case -3: if (8 * sizeof(size_t) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(size_t, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(size_t) - 1 > 3 * PyLong_SHIFT) { return (size_t) (((size_t)-1)*(((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]))); } } break; case 3: if (8 * sizeof(size_t) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(size_t, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(size_t) - 1 > 3 * PyLong_SHIFT) { return (size_t) ((((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]))); } } break; case -4: if (8 * sizeof(size_t) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(size_t, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(size_t) - 1 > 4 * PyLong_SHIFT) { return (size_t) (((size_t)-1)*(((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]))); } } break; case 4: if (8 * sizeof(size_t) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(size_t, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(size_t) - 1 > 4 * PyLong_SHIFT) { return (size_t) ((((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]))); } } break; } #endif if (sizeof(size_t) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(size_t, long, PyLong_AsLong(x)) } else if (sizeof(size_t) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(size_t, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else size_t val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (size_t) -1; } } else { size_t val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (size_t) -1; val = __Pyx_PyInt_As_size_t(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to size_t"); return (size_t) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to size_t"); return (size_t) -1; } /* CIntFromPy */ static CYTHON_INLINE NormType __Pyx_PyInt_As_NormType(PyObject *x) { const NormType neg_one = (NormType) -1, const_zero = (NormType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(NormType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(NormType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (NormType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (NormType) 0; case 1: __PYX_VERIFY_RETURN_INT(NormType, digit, digits[0]) case 2: if (8 * sizeof(NormType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(NormType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(NormType) >= 2 * PyLong_SHIFT) { return (NormType) (((((NormType)digits[1]) << PyLong_SHIFT) | (NormType)digits[0])); } } break; case 3: if (8 * sizeof(NormType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(NormType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(NormType) >= 3 * PyLong_SHIFT) { return (NormType) (((((((NormType)digits[2]) << PyLong_SHIFT) | (NormType)digits[1]) << PyLong_SHIFT) | (NormType)digits[0])); } } break; case 4: if (8 * sizeof(NormType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(NormType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(NormType) >= 4 * PyLong_SHIFT) { return (NormType) (((((((((NormType)digits[3]) << PyLong_SHIFT) | (NormType)digits[2]) << PyLong_SHIFT) | (NormType)digits[1]) << PyLong_SHIFT) | (NormType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (NormType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(NormType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(NormType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(NormType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(NormType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (NormType) 0; case -1: __PYX_VERIFY_RETURN_INT(NormType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(NormType, digit, +digits[0]) case -2: if (8 * sizeof(NormType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(NormType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(NormType) - 1 > 2 * PyLong_SHIFT) { return (NormType) (((NormType)-1)*(((((NormType)digits[1]) << PyLong_SHIFT) | (NormType)digits[0]))); } } break; case 2: if (8 * sizeof(NormType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(NormType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(NormType) - 1 > 2 * PyLong_SHIFT) { return (NormType) ((((((NormType)digits[1]) << PyLong_SHIFT) | (NormType)digits[0]))); } } break; case -3: if (8 * sizeof(NormType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(NormType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(NormType) - 1 > 3 * PyLong_SHIFT) { return (NormType) (((NormType)-1)*(((((((NormType)digits[2]) << PyLong_SHIFT) | (NormType)digits[1]) << PyLong_SHIFT) | (NormType)digits[0]))); } } break; case 3: if (8 * sizeof(NormType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(NormType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(NormType) - 1 > 3 * PyLong_SHIFT) { return (NormType) ((((((((NormType)digits[2]) << PyLong_SHIFT) | (NormType)digits[1]) << PyLong_SHIFT) | (NormType)digits[0]))); } } break; case -4: if (8 * sizeof(NormType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(NormType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(NormType) - 1 > 4 * PyLong_SHIFT) { return (NormType) (((NormType)-1)*(((((((((NormType)digits[3]) << PyLong_SHIFT) | (NormType)digits[2]) << PyLong_SHIFT) | (NormType)digits[1]) << PyLong_SHIFT) | (NormType)digits[0]))); } } break; case 4: if (8 * sizeof(NormType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(NormType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(NormType) - 1 > 4 * PyLong_SHIFT) { return (NormType) ((((((((((NormType)digits[3]) << PyLong_SHIFT) | (NormType)digits[2]) << PyLong_SHIFT) | (NormType)digits[1]) << PyLong_SHIFT) | (NormType)digits[0]))); } } break; } #endif if (sizeof(NormType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(NormType, long, PyLong_AsLong(x)) } else if (sizeof(NormType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(NormType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else NormType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (NormType) -1; } } else { NormType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (NormType) -1; val = __Pyx_PyInt_As_NormType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to NormType"); return (NormType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to NormType"); return (NormType) -1; } /* CIntFromPy */ static CYTHON_INLINE MatOption __Pyx_PyInt_As_MatOption(PyObject *x) { const MatOption neg_one = (MatOption) -1, const_zero = (MatOption) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(MatOption) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(MatOption, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (MatOption) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (MatOption) 0; case 1: __PYX_VERIFY_RETURN_INT(MatOption, digit, digits[0]) case 2: if (8 * sizeof(MatOption) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatOption, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatOption) >= 2 * PyLong_SHIFT) { return (MatOption) (((((MatOption)digits[1]) << PyLong_SHIFT) | (MatOption)digits[0])); } } break; case 3: if (8 * sizeof(MatOption) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatOption, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatOption) >= 3 * PyLong_SHIFT) { return (MatOption) (((((((MatOption)digits[2]) << PyLong_SHIFT) | (MatOption)digits[1]) << PyLong_SHIFT) | (MatOption)digits[0])); } } break; case 4: if (8 * sizeof(MatOption) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatOption, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatOption) >= 4 * PyLong_SHIFT) { return (MatOption) (((((((((MatOption)digits[3]) << PyLong_SHIFT) | (MatOption)digits[2]) << PyLong_SHIFT) | (MatOption)digits[1]) << PyLong_SHIFT) | (MatOption)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (MatOption) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(MatOption) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(MatOption, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(MatOption) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(MatOption, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (MatOption) 0; case -1: __PYX_VERIFY_RETURN_INT(MatOption, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(MatOption, digit, +digits[0]) case -2: if (8 * sizeof(MatOption) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatOption, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatOption) - 1 > 2 * PyLong_SHIFT) { return (MatOption) (((MatOption)-1)*(((((MatOption)digits[1]) << PyLong_SHIFT) | (MatOption)digits[0]))); } } break; case 2: if (8 * sizeof(MatOption) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatOption, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatOption) - 1 > 2 * PyLong_SHIFT) { return (MatOption) ((((((MatOption)digits[1]) << PyLong_SHIFT) | (MatOption)digits[0]))); } } break; case -3: if (8 * sizeof(MatOption) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatOption, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatOption) - 1 > 3 * PyLong_SHIFT) { return (MatOption) (((MatOption)-1)*(((((((MatOption)digits[2]) << PyLong_SHIFT) | (MatOption)digits[1]) << PyLong_SHIFT) | (MatOption)digits[0]))); } } break; case 3: if (8 * sizeof(MatOption) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatOption, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatOption) - 1 > 3 * PyLong_SHIFT) { return (MatOption) ((((((((MatOption)digits[2]) << PyLong_SHIFT) | (MatOption)digits[1]) << PyLong_SHIFT) | (MatOption)digits[0]))); } } break; case -4: if (8 * sizeof(MatOption) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatOption, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatOption) - 1 > 4 * PyLong_SHIFT) { return (MatOption) (((MatOption)-1)*(((((((((MatOption)digits[3]) << PyLong_SHIFT) | (MatOption)digits[2]) << PyLong_SHIFT) | (MatOption)digits[1]) << PyLong_SHIFT) | (MatOption)digits[0]))); } } break; case 4: if (8 * sizeof(MatOption) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(MatOption, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(MatOption) - 1 > 4 * PyLong_SHIFT) { return (MatOption) ((((((((((MatOption)digits[3]) << PyLong_SHIFT) | (MatOption)digits[2]) << PyLong_SHIFT) | (MatOption)digits[1]) << PyLong_SHIFT) | (MatOption)digits[0]))); } } break; } #endif if (sizeof(MatOption) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(MatOption, long, PyLong_AsLong(x)) } else if (sizeof(MatOption) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(MatOption, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else MatOption val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (MatOption) -1; } } else { MatOption val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (MatOption) -1; val = __Pyx_PyInt_As_MatOption(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to MatOption"); return (MatOption) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to MatOption"); return (MatOption) -1; } /* CIntFromPy */ static CYTHON_INLINE PCASMType __Pyx_PyInt_As_PCASMType(PyObject *x) { const PCASMType neg_one = (PCASMType) -1, const_zero = (PCASMType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PCASMType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PCASMType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PCASMType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCASMType) 0; case 1: __PYX_VERIFY_RETURN_INT(PCASMType, digit, digits[0]) case 2: if (8 * sizeof(PCASMType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCASMType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCASMType) >= 2 * PyLong_SHIFT) { return (PCASMType) (((((PCASMType)digits[1]) << PyLong_SHIFT) | (PCASMType)digits[0])); } } break; case 3: if (8 * sizeof(PCASMType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCASMType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCASMType) >= 3 * PyLong_SHIFT) { return (PCASMType) (((((((PCASMType)digits[2]) << PyLong_SHIFT) | (PCASMType)digits[1]) << PyLong_SHIFT) | (PCASMType)digits[0])); } } break; case 4: if (8 * sizeof(PCASMType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCASMType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCASMType) >= 4 * PyLong_SHIFT) { return (PCASMType) (((((((((PCASMType)digits[3]) << PyLong_SHIFT) | (PCASMType)digits[2]) << PyLong_SHIFT) | (PCASMType)digits[1]) << PyLong_SHIFT) | (PCASMType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PCASMType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PCASMType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PCASMType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PCASMType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCASMType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCASMType) 0; case -1: __PYX_VERIFY_RETURN_INT(PCASMType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PCASMType, digit, +digits[0]) case -2: if (8 * sizeof(PCASMType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCASMType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCASMType) - 1 > 2 * PyLong_SHIFT) { return (PCASMType) (((PCASMType)-1)*(((((PCASMType)digits[1]) << PyLong_SHIFT) | (PCASMType)digits[0]))); } } break; case 2: if (8 * sizeof(PCASMType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCASMType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCASMType) - 1 > 2 * PyLong_SHIFT) { return (PCASMType) ((((((PCASMType)digits[1]) << PyLong_SHIFT) | (PCASMType)digits[0]))); } } break; case -3: if (8 * sizeof(PCASMType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCASMType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCASMType) - 1 > 3 * PyLong_SHIFT) { return (PCASMType) (((PCASMType)-1)*(((((((PCASMType)digits[2]) << PyLong_SHIFT) | (PCASMType)digits[1]) << PyLong_SHIFT) | (PCASMType)digits[0]))); } } break; case 3: if (8 * sizeof(PCASMType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCASMType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCASMType) - 1 > 3 * PyLong_SHIFT) { return (PCASMType) ((((((((PCASMType)digits[2]) << PyLong_SHIFT) | (PCASMType)digits[1]) << PyLong_SHIFT) | (PCASMType)digits[0]))); } } break; case -4: if (8 * sizeof(PCASMType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCASMType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCASMType) - 1 > 4 * PyLong_SHIFT) { return (PCASMType) (((PCASMType)-1)*(((((((((PCASMType)digits[3]) << PyLong_SHIFT) | (PCASMType)digits[2]) << PyLong_SHIFT) | (PCASMType)digits[1]) << PyLong_SHIFT) | (PCASMType)digits[0]))); } } break; case 4: if (8 * sizeof(PCASMType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCASMType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCASMType) - 1 > 4 * PyLong_SHIFT) { return (PCASMType) ((((((((((PCASMType)digits[3]) << PyLong_SHIFT) | (PCASMType)digits[2]) << PyLong_SHIFT) | (PCASMType)digits[1]) << PyLong_SHIFT) | (PCASMType)digits[0]))); } } break; } #endif if (sizeof(PCASMType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PCASMType, long, PyLong_AsLong(x)) } else if (sizeof(PCASMType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCASMType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PCASMType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PCASMType) -1; } } else { PCASMType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PCASMType) -1; val = __Pyx_PyInt_As_PCASMType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PCASMType"); return (PCASMType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PCASMType"); return (PCASMType) -1; } /* CIntFromPy */ static CYTHON_INLINE PCGASMType __Pyx_PyInt_As_PCGASMType(PyObject *x) { const PCGASMType neg_one = (PCGASMType) -1, const_zero = (PCGASMType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PCGASMType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PCGASMType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PCGASMType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCGASMType) 0; case 1: __PYX_VERIFY_RETURN_INT(PCGASMType, digit, digits[0]) case 2: if (8 * sizeof(PCGASMType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCGASMType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCGASMType) >= 2 * PyLong_SHIFT) { return (PCGASMType) (((((PCGASMType)digits[1]) << PyLong_SHIFT) | (PCGASMType)digits[0])); } } break; case 3: if (8 * sizeof(PCGASMType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCGASMType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCGASMType) >= 3 * PyLong_SHIFT) { return (PCGASMType) (((((((PCGASMType)digits[2]) << PyLong_SHIFT) | (PCGASMType)digits[1]) << PyLong_SHIFT) | (PCGASMType)digits[0])); } } break; case 4: if (8 * sizeof(PCGASMType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCGASMType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCGASMType) >= 4 * PyLong_SHIFT) { return (PCGASMType) (((((((((PCGASMType)digits[3]) << PyLong_SHIFT) | (PCGASMType)digits[2]) << PyLong_SHIFT) | (PCGASMType)digits[1]) << PyLong_SHIFT) | (PCGASMType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PCGASMType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PCGASMType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PCGASMType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PCGASMType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCGASMType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCGASMType) 0; case -1: __PYX_VERIFY_RETURN_INT(PCGASMType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PCGASMType, digit, +digits[0]) case -2: if (8 * sizeof(PCGASMType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCGASMType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCGASMType) - 1 > 2 * PyLong_SHIFT) { return (PCGASMType) (((PCGASMType)-1)*(((((PCGASMType)digits[1]) << PyLong_SHIFT) | (PCGASMType)digits[0]))); } } break; case 2: if (8 * sizeof(PCGASMType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCGASMType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCGASMType) - 1 > 2 * PyLong_SHIFT) { return (PCGASMType) ((((((PCGASMType)digits[1]) << PyLong_SHIFT) | (PCGASMType)digits[0]))); } } break; case -3: if (8 * sizeof(PCGASMType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCGASMType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCGASMType) - 1 > 3 * PyLong_SHIFT) { return (PCGASMType) (((PCGASMType)-1)*(((((((PCGASMType)digits[2]) << PyLong_SHIFT) | (PCGASMType)digits[1]) << PyLong_SHIFT) | (PCGASMType)digits[0]))); } } break; case 3: if (8 * sizeof(PCGASMType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCGASMType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCGASMType) - 1 > 3 * PyLong_SHIFT) { return (PCGASMType) ((((((((PCGASMType)digits[2]) << PyLong_SHIFT) | (PCGASMType)digits[1]) << PyLong_SHIFT) | (PCGASMType)digits[0]))); } } break; case -4: if (8 * sizeof(PCGASMType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCGASMType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCGASMType) - 1 > 4 * PyLong_SHIFT) { return (PCGASMType) (((PCGASMType)-1)*(((((((((PCGASMType)digits[3]) << PyLong_SHIFT) | (PCGASMType)digits[2]) << PyLong_SHIFT) | (PCGASMType)digits[1]) << PyLong_SHIFT) | (PCGASMType)digits[0]))); } } break; case 4: if (8 * sizeof(PCGASMType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCGASMType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCGASMType) - 1 > 4 * PyLong_SHIFT) { return (PCGASMType) ((((((((((PCGASMType)digits[3]) << PyLong_SHIFT) | (PCGASMType)digits[2]) << PyLong_SHIFT) | (PCGASMType)digits[1]) << PyLong_SHIFT) | (PCGASMType)digits[0]))); } } break; } #endif if (sizeof(PCGASMType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PCGASMType, long, PyLong_AsLong(x)) } else if (sizeof(PCGASMType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCGASMType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PCGASMType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PCGASMType) -1; } } else { PCGASMType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PCGASMType) -1; val = __Pyx_PyInt_As_PCGASMType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PCGASMType"); return (PCGASMType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PCGASMType"); return (PCGASMType) -1; } /* CIntFromPy */ static CYTHON_INLINE PCCompositeType __Pyx_PyInt_As_PCCompositeType(PyObject *x) { const PCCompositeType neg_one = (PCCompositeType) -1, const_zero = (PCCompositeType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PCCompositeType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PCCompositeType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PCCompositeType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCCompositeType) 0; case 1: __PYX_VERIFY_RETURN_INT(PCCompositeType, digit, digits[0]) case 2: if (8 * sizeof(PCCompositeType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCCompositeType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCCompositeType) >= 2 * PyLong_SHIFT) { return (PCCompositeType) (((((PCCompositeType)digits[1]) << PyLong_SHIFT) | (PCCompositeType)digits[0])); } } break; case 3: if (8 * sizeof(PCCompositeType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCCompositeType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCCompositeType) >= 3 * PyLong_SHIFT) { return (PCCompositeType) (((((((PCCompositeType)digits[2]) << PyLong_SHIFT) | (PCCompositeType)digits[1]) << PyLong_SHIFT) | (PCCompositeType)digits[0])); } } break; case 4: if (8 * sizeof(PCCompositeType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCCompositeType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCCompositeType) >= 4 * PyLong_SHIFT) { return (PCCompositeType) (((((((((PCCompositeType)digits[3]) << PyLong_SHIFT) | (PCCompositeType)digits[2]) << PyLong_SHIFT) | (PCCompositeType)digits[1]) << PyLong_SHIFT) | (PCCompositeType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PCCompositeType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PCCompositeType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PCCompositeType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PCCompositeType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCCompositeType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCCompositeType) 0; case -1: __PYX_VERIFY_RETURN_INT(PCCompositeType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PCCompositeType, digit, +digits[0]) case -2: if (8 * sizeof(PCCompositeType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCCompositeType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCCompositeType) - 1 > 2 * PyLong_SHIFT) { return (PCCompositeType) (((PCCompositeType)-1)*(((((PCCompositeType)digits[1]) << PyLong_SHIFT) | (PCCompositeType)digits[0]))); } } break; case 2: if (8 * sizeof(PCCompositeType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCCompositeType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCCompositeType) - 1 > 2 * PyLong_SHIFT) { return (PCCompositeType) ((((((PCCompositeType)digits[1]) << PyLong_SHIFT) | (PCCompositeType)digits[0]))); } } break; case -3: if (8 * sizeof(PCCompositeType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCCompositeType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCCompositeType) - 1 > 3 * PyLong_SHIFT) { return (PCCompositeType) (((PCCompositeType)-1)*(((((((PCCompositeType)digits[2]) << PyLong_SHIFT) | (PCCompositeType)digits[1]) << PyLong_SHIFT) | (PCCompositeType)digits[0]))); } } break; case 3: if (8 * sizeof(PCCompositeType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCCompositeType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCCompositeType) - 1 > 3 * PyLong_SHIFT) { return (PCCompositeType) ((((((((PCCompositeType)digits[2]) << PyLong_SHIFT) | (PCCompositeType)digits[1]) << PyLong_SHIFT) | (PCCompositeType)digits[0]))); } } break; case -4: if (8 * sizeof(PCCompositeType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCCompositeType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCCompositeType) - 1 > 4 * PyLong_SHIFT) { return (PCCompositeType) (((PCCompositeType)-1)*(((((((((PCCompositeType)digits[3]) << PyLong_SHIFT) | (PCCompositeType)digits[2]) << PyLong_SHIFT) | (PCCompositeType)digits[1]) << PyLong_SHIFT) | (PCCompositeType)digits[0]))); } } break; case 4: if (8 * sizeof(PCCompositeType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCCompositeType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCCompositeType) - 1 > 4 * PyLong_SHIFT) { return (PCCompositeType) ((((((((((PCCompositeType)digits[3]) << PyLong_SHIFT) | (PCCompositeType)digits[2]) << PyLong_SHIFT) | (PCCompositeType)digits[1]) << PyLong_SHIFT) | (PCCompositeType)digits[0]))); } } break; } #endif if (sizeof(PCCompositeType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PCCompositeType, long, PyLong_AsLong(x)) } else if (sizeof(PCCompositeType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCCompositeType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PCCompositeType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PCCompositeType) -1; } } else { PCCompositeType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PCCompositeType) -1; val = __Pyx_PyInt_As_PCCompositeType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PCCompositeType"); return (PCCompositeType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PCCompositeType"); return (PCCompositeType) -1; } /* CIntFromPy */ static CYTHON_INLINE PCFieldSplitSchurFactType __Pyx_PyInt_As_PCFieldSplitSchurFactType(PyObject *x) { const PCFieldSplitSchurFactType neg_one = (PCFieldSplitSchurFactType) -1, const_zero = (PCFieldSplitSchurFactType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PCFieldSplitSchurFactType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PCFieldSplitSchurFactType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCFieldSplitSchurFactType) 0; case 1: __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, digit, digits[0]) case 2: if (8 * sizeof(PCFieldSplitSchurFactType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurFactType) >= 2 * PyLong_SHIFT) { return (PCFieldSplitSchurFactType) (((((PCFieldSplitSchurFactType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[0])); } } break; case 3: if (8 * sizeof(PCFieldSplitSchurFactType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurFactType) >= 3 * PyLong_SHIFT) { return (PCFieldSplitSchurFactType) (((((((PCFieldSplitSchurFactType)digits[2]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[0])); } } break; case 4: if (8 * sizeof(PCFieldSplitSchurFactType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurFactType) >= 4 * PyLong_SHIFT) { return (PCFieldSplitSchurFactType) (((((((((PCFieldSplitSchurFactType)digits[3]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[2]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PCFieldSplitSchurFactType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PCFieldSplitSchurFactType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PCFieldSplitSchurFactType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PCFieldSplitSchurFactType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCFieldSplitSchurFactType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCFieldSplitSchurFactType) 0; case -1: __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, digit, +digits[0]) case -2: if (8 * sizeof(PCFieldSplitSchurFactType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurFactType) - 1 > 2 * PyLong_SHIFT) { return (PCFieldSplitSchurFactType) (((PCFieldSplitSchurFactType)-1)*(((((PCFieldSplitSchurFactType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[0]))); } } break; case 2: if (8 * sizeof(PCFieldSplitSchurFactType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurFactType) - 1 > 2 * PyLong_SHIFT) { return (PCFieldSplitSchurFactType) ((((((PCFieldSplitSchurFactType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[0]))); } } break; case -3: if (8 * sizeof(PCFieldSplitSchurFactType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurFactType) - 1 > 3 * PyLong_SHIFT) { return (PCFieldSplitSchurFactType) (((PCFieldSplitSchurFactType)-1)*(((((((PCFieldSplitSchurFactType)digits[2]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[0]))); } } break; case 3: if (8 * sizeof(PCFieldSplitSchurFactType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurFactType) - 1 > 3 * PyLong_SHIFT) { return (PCFieldSplitSchurFactType) ((((((((PCFieldSplitSchurFactType)digits[2]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[0]))); } } break; case -4: if (8 * sizeof(PCFieldSplitSchurFactType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurFactType) - 1 > 4 * PyLong_SHIFT) { return (PCFieldSplitSchurFactType) (((PCFieldSplitSchurFactType)-1)*(((((((((PCFieldSplitSchurFactType)digits[3]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[2]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[0]))); } } break; case 4: if (8 * sizeof(PCFieldSplitSchurFactType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurFactType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurFactType) - 1 > 4 * PyLong_SHIFT) { return (PCFieldSplitSchurFactType) ((((((((((PCFieldSplitSchurFactType)digits[3]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[2]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurFactType)digits[0]))); } } break; } #endif if (sizeof(PCFieldSplitSchurFactType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PCFieldSplitSchurFactType, long, PyLong_AsLong(x)) } else if (sizeof(PCFieldSplitSchurFactType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCFieldSplitSchurFactType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PCFieldSplitSchurFactType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PCFieldSplitSchurFactType) -1; } } else { PCFieldSplitSchurFactType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PCFieldSplitSchurFactType) -1; val = __Pyx_PyInt_As_PCFieldSplitSchurFactType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PCFieldSplitSchurFactType"); return (PCFieldSplitSchurFactType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PCFieldSplitSchurFactType"); return (PCFieldSplitSchurFactType) -1; } /* CIntFromPy */ static CYTHON_INLINE PCFieldSplitSchurPreType __Pyx_PyInt_As_PCFieldSplitSchurPreType(PyObject *x) { const PCFieldSplitSchurPreType neg_one = (PCFieldSplitSchurPreType) -1, const_zero = (PCFieldSplitSchurPreType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PCFieldSplitSchurPreType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PCFieldSplitSchurPreType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCFieldSplitSchurPreType) 0; case 1: __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, digit, digits[0]) case 2: if (8 * sizeof(PCFieldSplitSchurPreType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurPreType) >= 2 * PyLong_SHIFT) { return (PCFieldSplitSchurPreType) (((((PCFieldSplitSchurPreType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[0])); } } break; case 3: if (8 * sizeof(PCFieldSplitSchurPreType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurPreType) >= 3 * PyLong_SHIFT) { return (PCFieldSplitSchurPreType) (((((((PCFieldSplitSchurPreType)digits[2]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[0])); } } break; case 4: if (8 * sizeof(PCFieldSplitSchurPreType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurPreType) >= 4 * PyLong_SHIFT) { return (PCFieldSplitSchurPreType) (((((((((PCFieldSplitSchurPreType)digits[3]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[2]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PCFieldSplitSchurPreType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PCFieldSplitSchurPreType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PCFieldSplitSchurPreType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PCFieldSplitSchurPreType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCFieldSplitSchurPreType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCFieldSplitSchurPreType) 0; case -1: __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, digit, +digits[0]) case -2: if (8 * sizeof(PCFieldSplitSchurPreType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurPreType) - 1 > 2 * PyLong_SHIFT) { return (PCFieldSplitSchurPreType) (((PCFieldSplitSchurPreType)-1)*(((((PCFieldSplitSchurPreType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[0]))); } } break; case 2: if (8 * sizeof(PCFieldSplitSchurPreType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurPreType) - 1 > 2 * PyLong_SHIFT) { return (PCFieldSplitSchurPreType) ((((((PCFieldSplitSchurPreType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[0]))); } } break; case -3: if (8 * sizeof(PCFieldSplitSchurPreType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurPreType) - 1 > 3 * PyLong_SHIFT) { return (PCFieldSplitSchurPreType) (((PCFieldSplitSchurPreType)-1)*(((((((PCFieldSplitSchurPreType)digits[2]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[0]))); } } break; case 3: if (8 * sizeof(PCFieldSplitSchurPreType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurPreType) - 1 > 3 * PyLong_SHIFT) { return (PCFieldSplitSchurPreType) ((((((((PCFieldSplitSchurPreType)digits[2]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[0]))); } } break; case -4: if (8 * sizeof(PCFieldSplitSchurPreType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurPreType) - 1 > 4 * PyLong_SHIFT) { return (PCFieldSplitSchurPreType) (((PCFieldSplitSchurPreType)-1)*(((((((((PCFieldSplitSchurPreType)digits[3]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[2]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[0]))); } } break; case 4: if (8 * sizeof(PCFieldSplitSchurPreType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCFieldSplitSchurPreType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCFieldSplitSchurPreType) - 1 > 4 * PyLong_SHIFT) { return (PCFieldSplitSchurPreType) ((((((((((PCFieldSplitSchurPreType)digits[3]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[2]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[1]) << PyLong_SHIFT) | (PCFieldSplitSchurPreType)digits[0]))); } } break; } #endif if (sizeof(PCFieldSplitSchurPreType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PCFieldSplitSchurPreType, long, PyLong_AsLong(x)) } else if (sizeof(PCFieldSplitSchurPreType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCFieldSplitSchurPreType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PCFieldSplitSchurPreType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PCFieldSplitSchurPreType) -1; } } else { PCFieldSplitSchurPreType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PCFieldSplitSchurPreType) -1; val = __Pyx_PyInt_As_PCFieldSplitSchurPreType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PCFieldSplitSchurPreType"); return (PCFieldSplitSchurPreType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PCFieldSplitSchurPreType"); return (PCFieldSplitSchurPreType) -1; } /* CIntFromPy */ static CYTHON_INLINE PCMGType __Pyx_PyInt_As_PCMGType(PyObject *x) { const PCMGType neg_one = (PCMGType) -1, const_zero = (PCMGType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PCMGType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PCMGType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PCMGType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCMGType) 0; case 1: __PYX_VERIFY_RETURN_INT(PCMGType, digit, digits[0]) case 2: if (8 * sizeof(PCMGType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCMGType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCMGType) >= 2 * PyLong_SHIFT) { return (PCMGType) (((((PCMGType)digits[1]) << PyLong_SHIFT) | (PCMGType)digits[0])); } } break; case 3: if (8 * sizeof(PCMGType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCMGType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCMGType) >= 3 * PyLong_SHIFT) { return (PCMGType) (((((((PCMGType)digits[2]) << PyLong_SHIFT) | (PCMGType)digits[1]) << PyLong_SHIFT) | (PCMGType)digits[0])); } } break; case 4: if (8 * sizeof(PCMGType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCMGType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCMGType) >= 4 * PyLong_SHIFT) { return (PCMGType) (((((((((PCMGType)digits[3]) << PyLong_SHIFT) | (PCMGType)digits[2]) << PyLong_SHIFT) | (PCMGType)digits[1]) << PyLong_SHIFT) | (PCMGType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PCMGType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PCMGType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PCMGType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PCMGType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCMGType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCMGType) 0; case -1: __PYX_VERIFY_RETURN_INT(PCMGType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PCMGType, digit, +digits[0]) case -2: if (8 * sizeof(PCMGType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCMGType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCMGType) - 1 > 2 * PyLong_SHIFT) { return (PCMGType) (((PCMGType)-1)*(((((PCMGType)digits[1]) << PyLong_SHIFT) | (PCMGType)digits[0]))); } } break; case 2: if (8 * sizeof(PCMGType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCMGType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCMGType) - 1 > 2 * PyLong_SHIFT) { return (PCMGType) ((((((PCMGType)digits[1]) << PyLong_SHIFT) | (PCMGType)digits[0]))); } } break; case -3: if (8 * sizeof(PCMGType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCMGType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCMGType) - 1 > 3 * PyLong_SHIFT) { return (PCMGType) (((PCMGType)-1)*(((((((PCMGType)digits[2]) << PyLong_SHIFT) | (PCMGType)digits[1]) << PyLong_SHIFT) | (PCMGType)digits[0]))); } } break; case 3: if (8 * sizeof(PCMGType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCMGType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCMGType) - 1 > 3 * PyLong_SHIFT) { return (PCMGType) ((((((((PCMGType)digits[2]) << PyLong_SHIFT) | (PCMGType)digits[1]) << PyLong_SHIFT) | (PCMGType)digits[0]))); } } break; case -4: if (8 * sizeof(PCMGType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCMGType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCMGType) - 1 > 4 * PyLong_SHIFT) { return (PCMGType) (((PCMGType)-1)*(((((((((PCMGType)digits[3]) << PyLong_SHIFT) | (PCMGType)digits[2]) << PyLong_SHIFT) | (PCMGType)digits[1]) << PyLong_SHIFT) | (PCMGType)digits[0]))); } } break; case 4: if (8 * sizeof(PCMGType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCMGType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCMGType) - 1 > 4 * PyLong_SHIFT) { return (PCMGType) ((((((((((PCMGType)digits[3]) << PyLong_SHIFT) | (PCMGType)digits[2]) << PyLong_SHIFT) | (PCMGType)digits[1]) << PyLong_SHIFT) | (PCMGType)digits[0]))); } } break; } #endif if (sizeof(PCMGType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PCMGType, long, PyLong_AsLong(x)) } else if (sizeof(PCMGType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCMGType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PCMGType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PCMGType) -1; } } else { PCMGType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PCMGType) -1; val = __Pyx_PyInt_As_PCMGType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PCMGType"); return (PCMGType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PCMGType"); return (PCMGType) -1; } /* CIntFromPy */ static CYTHON_INLINE PCSide __Pyx_PyInt_As_PCSide(PyObject *x) { const PCSide neg_one = (PCSide) -1, const_zero = (PCSide) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PCSide) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PCSide, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PCSide) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCSide) 0; case 1: __PYX_VERIFY_RETURN_INT(PCSide, digit, digits[0]) case 2: if (8 * sizeof(PCSide) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCSide, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCSide) >= 2 * PyLong_SHIFT) { return (PCSide) (((((PCSide)digits[1]) << PyLong_SHIFT) | (PCSide)digits[0])); } } break; case 3: if (8 * sizeof(PCSide) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCSide, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCSide) >= 3 * PyLong_SHIFT) { return (PCSide) (((((((PCSide)digits[2]) << PyLong_SHIFT) | (PCSide)digits[1]) << PyLong_SHIFT) | (PCSide)digits[0])); } } break; case 4: if (8 * sizeof(PCSide) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCSide, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCSide) >= 4 * PyLong_SHIFT) { return (PCSide) (((((((((PCSide)digits[3]) << PyLong_SHIFT) | (PCSide)digits[2]) << PyLong_SHIFT) | (PCSide)digits[1]) << PyLong_SHIFT) | (PCSide)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PCSide) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PCSide) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PCSide, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PCSide) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCSide, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PCSide) 0; case -1: __PYX_VERIFY_RETURN_INT(PCSide, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PCSide, digit, +digits[0]) case -2: if (8 * sizeof(PCSide) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCSide, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCSide) - 1 > 2 * PyLong_SHIFT) { return (PCSide) (((PCSide)-1)*(((((PCSide)digits[1]) << PyLong_SHIFT) | (PCSide)digits[0]))); } } break; case 2: if (8 * sizeof(PCSide) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCSide, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCSide) - 1 > 2 * PyLong_SHIFT) { return (PCSide) ((((((PCSide)digits[1]) << PyLong_SHIFT) | (PCSide)digits[0]))); } } break; case -3: if (8 * sizeof(PCSide) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCSide, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCSide) - 1 > 3 * PyLong_SHIFT) { return (PCSide) (((PCSide)-1)*(((((((PCSide)digits[2]) << PyLong_SHIFT) | (PCSide)digits[1]) << PyLong_SHIFT) | (PCSide)digits[0]))); } } break; case 3: if (8 * sizeof(PCSide) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCSide, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCSide) - 1 > 3 * PyLong_SHIFT) { return (PCSide) ((((((((PCSide)digits[2]) << PyLong_SHIFT) | (PCSide)digits[1]) << PyLong_SHIFT) | (PCSide)digits[0]))); } } break; case -4: if (8 * sizeof(PCSide) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCSide, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCSide) - 1 > 4 * PyLong_SHIFT) { return (PCSide) (((PCSide)-1)*(((((((((PCSide)digits[3]) << PyLong_SHIFT) | (PCSide)digits[2]) << PyLong_SHIFT) | (PCSide)digits[1]) << PyLong_SHIFT) | (PCSide)digits[0]))); } } break; case 4: if (8 * sizeof(PCSide) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PCSide, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PCSide) - 1 > 4 * PyLong_SHIFT) { return (PCSide) ((((((((((PCSide)digits[3]) << PyLong_SHIFT) | (PCSide)digits[2]) << PyLong_SHIFT) | (PCSide)digits[1]) << PyLong_SHIFT) | (PCSide)digits[0]))); } } break; } #endif if (sizeof(PCSide) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PCSide, long, PyLong_AsLong(x)) } else if (sizeof(PCSide) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PCSide, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PCSide val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PCSide) -1; } } else { PCSide val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PCSide) -1; val = __Pyx_PyInt_As_PCSide(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PCSide"); return (PCSide) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PCSide"); return (PCSide) -1; } /* CIntFromPy */ static CYTHON_INLINE KSPNormType __Pyx_PyInt_As_KSPNormType(PyObject *x) { const KSPNormType neg_one = (KSPNormType) -1, const_zero = (KSPNormType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(KSPNormType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(KSPNormType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (KSPNormType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (KSPNormType) 0; case 1: __PYX_VERIFY_RETURN_INT(KSPNormType, digit, digits[0]) case 2: if (8 * sizeof(KSPNormType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPNormType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPNormType) >= 2 * PyLong_SHIFT) { return (KSPNormType) (((((KSPNormType)digits[1]) << PyLong_SHIFT) | (KSPNormType)digits[0])); } } break; case 3: if (8 * sizeof(KSPNormType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPNormType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPNormType) >= 3 * PyLong_SHIFT) { return (KSPNormType) (((((((KSPNormType)digits[2]) << PyLong_SHIFT) | (KSPNormType)digits[1]) << PyLong_SHIFT) | (KSPNormType)digits[0])); } } break; case 4: if (8 * sizeof(KSPNormType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPNormType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPNormType) >= 4 * PyLong_SHIFT) { return (KSPNormType) (((((((((KSPNormType)digits[3]) << PyLong_SHIFT) | (KSPNormType)digits[2]) << PyLong_SHIFT) | (KSPNormType)digits[1]) << PyLong_SHIFT) | (KSPNormType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (KSPNormType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(KSPNormType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(KSPNormType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(KSPNormType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(KSPNormType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (KSPNormType) 0; case -1: __PYX_VERIFY_RETURN_INT(KSPNormType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(KSPNormType, digit, +digits[0]) case -2: if (8 * sizeof(KSPNormType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPNormType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPNormType) - 1 > 2 * PyLong_SHIFT) { return (KSPNormType) (((KSPNormType)-1)*(((((KSPNormType)digits[1]) << PyLong_SHIFT) | (KSPNormType)digits[0]))); } } break; case 2: if (8 * sizeof(KSPNormType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPNormType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPNormType) - 1 > 2 * PyLong_SHIFT) { return (KSPNormType) ((((((KSPNormType)digits[1]) << PyLong_SHIFT) | (KSPNormType)digits[0]))); } } break; case -3: if (8 * sizeof(KSPNormType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPNormType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPNormType) - 1 > 3 * PyLong_SHIFT) { return (KSPNormType) (((KSPNormType)-1)*(((((((KSPNormType)digits[2]) << PyLong_SHIFT) | (KSPNormType)digits[1]) << PyLong_SHIFT) | (KSPNormType)digits[0]))); } } break; case 3: if (8 * sizeof(KSPNormType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPNormType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPNormType) - 1 > 3 * PyLong_SHIFT) { return (KSPNormType) ((((((((KSPNormType)digits[2]) << PyLong_SHIFT) | (KSPNormType)digits[1]) << PyLong_SHIFT) | (KSPNormType)digits[0]))); } } break; case -4: if (8 * sizeof(KSPNormType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPNormType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPNormType) - 1 > 4 * PyLong_SHIFT) { return (KSPNormType) (((KSPNormType)-1)*(((((((((KSPNormType)digits[3]) << PyLong_SHIFT) | (KSPNormType)digits[2]) << PyLong_SHIFT) | (KSPNormType)digits[1]) << PyLong_SHIFT) | (KSPNormType)digits[0]))); } } break; case 4: if (8 * sizeof(KSPNormType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(KSPNormType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(KSPNormType) - 1 > 4 * PyLong_SHIFT) { return (KSPNormType) ((((((((((KSPNormType)digits[3]) << PyLong_SHIFT) | (KSPNormType)digits[2]) << PyLong_SHIFT) | (KSPNormType)digits[1]) << PyLong_SHIFT) | (KSPNormType)digits[0]))); } } break; } #endif if (sizeof(KSPNormType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(KSPNormType, long, PyLong_AsLong(x)) } else if (sizeof(KSPNormType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(KSPNormType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else KSPNormType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (KSPNormType) -1; } } else { KSPNormType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (KSPNormType) -1; val = __Pyx_PyInt_As_KSPNormType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to KSPNormType"); return (KSPNormType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to KSPNormType"); return (KSPNormType) -1; } /* CIntFromPy */ static CYTHON_INLINE SNESNormSchedule __Pyx_PyInt_As_SNESNormSchedule(PyObject *x) { const SNESNormSchedule neg_one = (SNESNormSchedule) -1, const_zero = (SNESNormSchedule) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(SNESNormSchedule) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(SNESNormSchedule, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (SNESNormSchedule) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (SNESNormSchedule) 0; case 1: __PYX_VERIFY_RETURN_INT(SNESNormSchedule, digit, digits[0]) case 2: if (8 * sizeof(SNESNormSchedule) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESNormSchedule, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESNormSchedule) >= 2 * PyLong_SHIFT) { return (SNESNormSchedule) (((((SNESNormSchedule)digits[1]) << PyLong_SHIFT) | (SNESNormSchedule)digits[0])); } } break; case 3: if (8 * sizeof(SNESNormSchedule) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESNormSchedule, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESNormSchedule) >= 3 * PyLong_SHIFT) { return (SNESNormSchedule) (((((((SNESNormSchedule)digits[2]) << PyLong_SHIFT) | (SNESNormSchedule)digits[1]) << PyLong_SHIFT) | (SNESNormSchedule)digits[0])); } } break; case 4: if (8 * sizeof(SNESNormSchedule) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESNormSchedule, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESNormSchedule) >= 4 * PyLong_SHIFT) { return (SNESNormSchedule) (((((((((SNESNormSchedule)digits[3]) << PyLong_SHIFT) | (SNESNormSchedule)digits[2]) << PyLong_SHIFT) | (SNESNormSchedule)digits[1]) << PyLong_SHIFT) | (SNESNormSchedule)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (SNESNormSchedule) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(SNESNormSchedule) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(SNESNormSchedule, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(SNESNormSchedule) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(SNESNormSchedule, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (SNESNormSchedule) 0; case -1: __PYX_VERIFY_RETURN_INT(SNESNormSchedule, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(SNESNormSchedule, digit, +digits[0]) case -2: if (8 * sizeof(SNESNormSchedule) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESNormSchedule, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESNormSchedule) - 1 > 2 * PyLong_SHIFT) { return (SNESNormSchedule) (((SNESNormSchedule)-1)*(((((SNESNormSchedule)digits[1]) << PyLong_SHIFT) | (SNESNormSchedule)digits[0]))); } } break; case 2: if (8 * sizeof(SNESNormSchedule) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESNormSchedule, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESNormSchedule) - 1 > 2 * PyLong_SHIFT) { return (SNESNormSchedule) ((((((SNESNormSchedule)digits[1]) << PyLong_SHIFT) | (SNESNormSchedule)digits[0]))); } } break; case -3: if (8 * sizeof(SNESNormSchedule) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESNormSchedule, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESNormSchedule) - 1 > 3 * PyLong_SHIFT) { return (SNESNormSchedule) (((SNESNormSchedule)-1)*(((((((SNESNormSchedule)digits[2]) << PyLong_SHIFT) | (SNESNormSchedule)digits[1]) << PyLong_SHIFT) | (SNESNormSchedule)digits[0]))); } } break; case 3: if (8 * sizeof(SNESNormSchedule) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESNormSchedule, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESNormSchedule) - 1 > 3 * PyLong_SHIFT) { return (SNESNormSchedule) ((((((((SNESNormSchedule)digits[2]) << PyLong_SHIFT) | (SNESNormSchedule)digits[1]) << PyLong_SHIFT) | (SNESNormSchedule)digits[0]))); } } break; case -4: if (8 * sizeof(SNESNormSchedule) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESNormSchedule, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESNormSchedule) - 1 > 4 * PyLong_SHIFT) { return (SNESNormSchedule) (((SNESNormSchedule)-1)*(((((((((SNESNormSchedule)digits[3]) << PyLong_SHIFT) | (SNESNormSchedule)digits[2]) << PyLong_SHIFT) | (SNESNormSchedule)digits[1]) << PyLong_SHIFT) | (SNESNormSchedule)digits[0]))); } } break; case 4: if (8 * sizeof(SNESNormSchedule) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(SNESNormSchedule, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(SNESNormSchedule) - 1 > 4 * PyLong_SHIFT) { return (SNESNormSchedule) ((((((((((SNESNormSchedule)digits[3]) << PyLong_SHIFT) | (SNESNormSchedule)digits[2]) << PyLong_SHIFT) | (SNESNormSchedule)digits[1]) << PyLong_SHIFT) | (SNESNormSchedule)digits[0]))); } } break; } #endif if (sizeof(SNESNormSchedule) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(SNESNormSchedule, long, PyLong_AsLong(x)) } else if (sizeof(SNESNormSchedule) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(SNESNormSchedule, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else SNESNormSchedule val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (SNESNormSchedule) -1; } } else { SNESNormSchedule val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (SNESNormSchedule) -1; val = __Pyx_PyInt_As_SNESNormSchedule(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to SNESNormSchedule"); return (SNESNormSchedule) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to SNESNormSchedule"); return (SNESNormSchedule) -1; } /* CIntFromPy */ static CYTHON_INLINE TSProblemType __Pyx_PyInt_As_TSProblemType(PyObject *x) { const TSProblemType neg_one = (TSProblemType) -1, const_zero = (TSProblemType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(TSProblemType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(TSProblemType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (TSProblemType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (TSProblemType) 0; case 1: __PYX_VERIFY_RETURN_INT(TSProblemType, digit, digits[0]) case 2: if (8 * sizeof(TSProblemType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSProblemType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSProblemType) >= 2 * PyLong_SHIFT) { return (TSProblemType) (((((TSProblemType)digits[1]) << PyLong_SHIFT) | (TSProblemType)digits[0])); } } break; case 3: if (8 * sizeof(TSProblemType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSProblemType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSProblemType) >= 3 * PyLong_SHIFT) { return (TSProblemType) (((((((TSProblemType)digits[2]) << PyLong_SHIFT) | (TSProblemType)digits[1]) << PyLong_SHIFT) | (TSProblemType)digits[0])); } } break; case 4: if (8 * sizeof(TSProblemType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSProblemType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSProblemType) >= 4 * PyLong_SHIFT) { return (TSProblemType) (((((((((TSProblemType)digits[3]) << PyLong_SHIFT) | (TSProblemType)digits[2]) << PyLong_SHIFT) | (TSProblemType)digits[1]) << PyLong_SHIFT) | (TSProblemType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (TSProblemType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(TSProblemType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(TSProblemType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(TSProblemType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(TSProblemType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (TSProblemType) 0; case -1: __PYX_VERIFY_RETURN_INT(TSProblemType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(TSProblemType, digit, +digits[0]) case -2: if (8 * sizeof(TSProblemType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSProblemType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSProblemType) - 1 > 2 * PyLong_SHIFT) { return (TSProblemType) (((TSProblemType)-1)*(((((TSProblemType)digits[1]) << PyLong_SHIFT) | (TSProblemType)digits[0]))); } } break; case 2: if (8 * sizeof(TSProblemType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSProblemType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSProblemType) - 1 > 2 * PyLong_SHIFT) { return (TSProblemType) ((((((TSProblemType)digits[1]) << PyLong_SHIFT) | (TSProblemType)digits[0]))); } } break; case -3: if (8 * sizeof(TSProblemType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSProblemType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSProblemType) - 1 > 3 * PyLong_SHIFT) { return (TSProblemType) (((TSProblemType)-1)*(((((((TSProblemType)digits[2]) << PyLong_SHIFT) | (TSProblemType)digits[1]) << PyLong_SHIFT) | (TSProblemType)digits[0]))); } } break; case 3: if (8 * sizeof(TSProblemType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSProblemType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSProblemType) - 1 > 3 * PyLong_SHIFT) { return (TSProblemType) ((((((((TSProblemType)digits[2]) << PyLong_SHIFT) | (TSProblemType)digits[1]) << PyLong_SHIFT) | (TSProblemType)digits[0]))); } } break; case -4: if (8 * sizeof(TSProblemType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSProblemType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSProblemType) - 1 > 4 * PyLong_SHIFT) { return (TSProblemType) (((TSProblemType)-1)*(((((((((TSProblemType)digits[3]) << PyLong_SHIFT) | (TSProblemType)digits[2]) << PyLong_SHIFT) | (TSProblemType)digits[1]) << PyLong_SHIFT) | (TSProblemType)digits[0]))); } } break; case 4: if (8 * sizeof(TSProblemType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSProblemType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSProblemType) - 1 > 4 * PyLong_SHIFT) { return (TSProblemType) ((((((((((TSProblemType)digits[3]) << PyLong_SHIFT) | (TSProblemType)digits[2]) << PyLong_SHIFT) | (TSProblemType)digits[1]) << PyLong_SHIFT) | (TSProblemType)digits[0]))); } } break; } #endif if (sizeof(TSProblemType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(TSProblemType, long, PyLong_AsLong(x)) } else if (sizeof(TSProblemType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(TSProblemType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else TSProblemType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (TSProblemType) -1; } } else { TSProblemType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (TSProblemType) -1; val = __Pyx_PyInt_As_TSProblemType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to TSProblemType"); return (TSProblemType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to TSProblemType"); return (TSProblemType) -1; } /* CIntFromPy */ static CYTHON_INLINE TSEquationType __Pyx_PyInt_As_TSEquationType(PyObject *x) { const TSEquationType neg_one = (TSEquationType) -1, const_zero = (TSEquationType) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(TSEquationType) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(TSEquationType, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (TSEquationType) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (TSEquationType) 0; case 1: __PYX_VERIFY_RETURN_INT(TSEquationType, digit, digits[0]) case 2: if (8 * sizeof(TSEquationType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSEquationType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSEquationType) >= 2 * PyLong_SHIFT) { return (TSEquationType) (((((TSEquationType)digits[1]) << PyLong_SHIFT) | (TSEquationType)digits[0])); } } break; case 3: if (8 * sizeof(TSEquationType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSEquationType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSEquationType) >= 3 * PyLong_SHIFT) { return (TSEquationType) (((((((TSEquationType)digits[2]) << PyLong_SHIFT) | (TSEquationType)digits[1]) << PyLong_SHIFT) | (TSEquationType)digits[0])); } } break; case 4: if (8 * sizeof(TSEquationType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSEquationType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSEquationType) >= 4 * PyLong_SHIFT) { return (TSEquationType) (((((((((TSEquationType)digits[3]) << PyLong_SHIFT) | (TSEquationType)digits[2]) << PyLong_SHIFT) | (TSEquationType)digits[1]) << PyLong_SHIFT) | (TSEquationType)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (TSEquationType) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(TSEquationType) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(TSEquationType, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(TSEquationType) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(TSEquationType, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (TSEquationType) 0; case -1: __PYX_VERIFY_RETURN_INT(TSEquationType, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(TSEquationType, digit, +digits[0]) case -2: if (8 * sizeof(TSEquationType) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSEquationType, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSEquationType) - 1 > 2 * PyLong_SHIFT) { return (TSEquationType) (((TSEquationType)-1)*(((((TSEquationType)digits[1]) << PyLong_SHIFT) | (TSEquationType)digits[0]))); } } break; case 2: if (8 * sizeof(TSEquationType) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSEquationType, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSEquationType) - 1 > 2 * PyLong_SHIFT) { return (TSEquationType) ((((((TSEquationType)digits[1]) << PyLong_SHIFT) | (TSEquationType)digits[0]))); } } break; case -3: if (8 * sizeof(TSEquationType) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSEquationType, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSEquationType) - 1 > 3 * PyLong_SHIFT) { return (TSEquationType) (((TSEquationType)-1)*(((((((TSEquationType)digits[2]) << PyLong_SHIFT) | (TSEquationType)digits[1]) << PyLong_SHIFT) | (TSEquationType)digits[0]))); } } break; case 3: if (8 * sizeof(TSEquationType) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSEquationType, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSEquationType) - 1 > 3 * PyLong_SHIFT) { return (TSEquationType) ((((((((TSEquationType)digits[2]) << PyLong_SHIFT) | (TSEquationType)digits[1]) << PyLong_SHIFT) | (TSEquationType)digits[0]))); } } break; case -4: if (8 * sizeof(TSEquationType) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSEquationType, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSEquationType) - 1 > 4 * PyLong_SHIFT) { return (TSEquationType) (((TSEquationType)-1)*(((((((((TSEquationType)digits[3]) << PyLong_SHIFT) | (TSEquationType)digits[2]) << PyLong_SHIFT) | (TSEquationType)digits[1]) << PyLong_SHIFT) | (TSEquationType)digits[0]))); } } break; case 4: if (8 * sizeof(TSEquationType) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSEquationType, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSEquationType) - 1 > 4 * PyLong_SHIFT) { return (TSEquationType) ((((((((((TSEquationType)digits[3]) << PyLong_SHIFT) | (TSEquationType)digits[2]) << PyLong_SHIFT) | (TSEquationType)digits[1]) << PyLong_SHIFT) | (TSEquationType)digits[0]))); } } break; } #endif if (sizeof(TSEquationType) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(TSEquationType, long, PyLong_AsLong(x)) } else if (sizeof(TSEquationType) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(TSEquationType, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else TSEquationType val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (TSEquationType) -1; } } else { TSEquationType val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (TSEquationType) -1; val = __Pyx_PyInt_As_TSEquationType(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to TSEquationType"); return (TSEquationType) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to TSEquationType"); return (TSEquationType) -1; } /* CIntFromPy */ static CYTHON_INLINE TSExactFinalTimeOption __Pyx_PyInt_As_TSExactFinalTimeOption(PyObject *x) { const TSExactFinalTimeOption neg_one = (TSExactFinalTimeOption) -1, const_zero = (TSExactFinalTimeOption) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(TSExactFinalTimeOption) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (TSExactFinalTimeOption) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (TSExactFinalTimeOption) 0; case 1: __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, digit, digits[0]) case 2: if (8 * sizeof(TSExactFinalTimeOption) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSExactFinalTimeOption) >= 2 * PyLong_SHIFT) { return (TSExactFinalTimeOption) (((((TSExactFinalTimeOption)digits[1]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[0])); } } break; case 3: if (8 * sizeof(TSExactFinalTimeOption) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSExactFinalTimeOption) >= 3 * PyLong_SHIFT) { return (TSExactFinalTimeOption) (((((((TSExactFinalTimeOption)digits[2]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[1]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[0])); } } break; case 4: if (8 * sizeof(TSExactFinalTimeOption) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSExactFinalTimeOption) >= 4 * PyLong_SHIFT) { return (TSExactFinalTimeOption) (((((((((TSExactFinalTimeOption)digits[3]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[2]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[1]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (TSExactFinalTimeOption) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(TSExactFinalTimeOption) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(TSExactFinalTimeOption, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(TSExactFinalTimeOption) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(TSExactFinalTimeOption, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (TSExactFinalTimeOption) 0; case -1: __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, digit, +digits[0]) case -2: if (8 * sizeof(TSExactFinalTimeOption) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSExactFinalTimeOption) - 1 > 2 * PyLong_SHIFT) { return (TSExactFinalTimeOption) (((TSExactFinalTimeOption)-1)*(((((TSExactFinalTimeOption)digits[1]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[0]))); } } break; case 2: if (8 * sizeof(TSExactFinalTimeOption) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSExactFinalTimeOption) - 1 > 2 * PyLong_SHIFT) { return (TSExactFinalTimeOption) ((((((TSExactFinalTimeOption)digits[1]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[0]))); } } break; case -3: if (8 * sizeof(TSExactFinalTimeOption) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSExactFinalTimeOption) - 1 > 3 * PyLong_SHIFT) { return (TSExactFinalTimeOption) (((TSExactFinalTimeOption)-1)*(((((((TSExactFinalTimeOption)digits[2]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[1]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[0]))); } } break; case 3: if (8 * sizeof(TSExactFinalTimeOption) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSExactFinalTimeOption) - 1 > 3 * PyLong_SHIFT) { return (TSExactFinalTimeOption) ((((((((TSExactFinalTimeOption)digits[2]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[1]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[0]))); } } break; case -4: if (8 * sizeof(TSExactFinalTimeOption) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSExactFinalTimeOption) - 1 > 4 * PyLong_SHIFT) { return (TSExactFinalTimeOption) (((TSExactFinalTimeOption)-1)*(((((((((TSExactFinalTimeOption)digits[3]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[2]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[1]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[0]))); } } break; case 4: if (8 * sizeof(TSExactFinalTimeOption) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSExactFinalTimeOption, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSExactFinalTimeOption) - 1 > 4 * PyLong_SHIFT) { return (TSExactFinalTimeOption) ((((((((((TSExactFinalTimeOption)digits[3]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[2]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[1]) << PyLong_SHIFT) | (TSExactFinalTimeOption)digits[0]))); } } break; } #endif if (sizeof(TSExactFinalTimeOption) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(TSExactFinalTimeOption, long, PyLong_AsLong(x)) } else if (sizeof(TSExactFinalTimeOption) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(TSExactFinalTimeOption, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else TSExactFinalTimeOption val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (TSExactFinalTimeOption) -1; } } else { TSExactFinalTimeOption val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (TSExactFinalTimeOption) -1; val = __Pyx_PyInt_As_TSExactFinalTimeOption(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to TSExactFinalTimeOption"); return (TSExactFinalTimeOption) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to TSExactFinalTimeOption"); return (TSExactFinalTimeOption) -1; } /* CIntFromPy */ static CYTHON_INLINE TSConvergedReason __Pyx_PyInt_As_TSConvergedReason(PyObject *x) { const TSConvergedReason neg_one = (TSConvergedReason) -1, const_zero = (TSConvergedReason) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(TSConvergedReason) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(TSConvergedReason, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (TSConvergedReason) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (TSConvergedReason) 0; case 1: __PYX_VERIFY_RETURN_INT(TSConvergedReason, digit, digits[0]) case 2: if (8 * sizeof(TSConvergedReason) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSConvergedReason, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSConvergedReason) >= 2 * PyLong_SHIFT) { return (TSConvergedReason) (((((TSConvergedReason)digits[1]) << PyLong_SHIFT) | (TSConvergedReason)digits[0])); } } break; case 3: if (8 * sizeof(TSConvergedReason) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSConvergedReason, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSConvergedReason) >= 3 * PyLong_SHIFT) { return (TSConvergedReason) (((((((TSConvergedReason)digits[2]) << PyLong_SHIFT) | (TSConvergedReason)digits[1]) << PyLong_SHIFT) | (TSConvergedReason)digits[0])); } } break; case 4: if (8 * sizeof(TSConvergedReason) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSConvergedReason, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSConvergedReason) >= 4 * PyLong_SHIFT) { return (TSConvergedReason) (((((((((TSConvergedReason)digits[3]) << PyLong_SHIFT) | (TSConvergedReason)digits[2]) << PyLong_SHIFT) | (TSConvergedReason)digits[1]) << PyLong_SHIFT) | (TSConvergedReason)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (TSConvergedReason) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(TSConvergedReason) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(TSConvergedReason, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(TSConvergedReason) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(TSConvergedReason, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (TSConvergedReason) 0; case -1: __PYX_VERIFY_RETURN_INT(TSConvergedReason, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(TSConvergedReason, digit, +digits[0]) case -2: if (8 * sizeof(TSConvergedReason) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSConvergedReason, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSConvergedReason) - 1 > 2 * PyLong_SHIFT) { return (TSConvergedReason) (((TSConvergedReason)-1)*(((((TSConvergedReason)digits[1]) << PyLong_SHIFT) | (TSConvergedReason)digits[0]))); } } break; case 2: if (8 * sizeof(TSConvergedReason) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSConvergedReason, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSConvergedReason) - 1 > 2 * PyLong_SHIFT) { return (TSConvergedReason) ((((((TSConvergedReason)digits[1]) << PyLong_SHIFT) | (TSConvergedReason)digits[0]))); } } break; case -3: if (8 * sizeof(TSConvergedReason) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSConvergedReason, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSConvergedReason) - 1 > 3 * PyLong_SHIFT) { return (TSConvergedReason) (((TSConvergedReason)-1)*(((((((TSConvergedReason)digits[2]) << PyLong_SHIFT) | (TSConvergedReason)digits[1]) << PyLong_SHIFT) | (TSConvergedReason)digits[0]))); } } break; case 3: if (8 * sizeof(TSConvergedReason) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSConvergedReason, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSConvergedReason) - 1 > 3 * PyLong_SHIFT) { return (TSConvergedReason) ((((((((TSConvergedReason)digits[2]) << PyLong_SHIFT) | (TSConvergedReason)digits[1]) << PyLong_SHIFT) | (TSConvergedReason)digits[0]))); } } break; case -4: if (8 * sizeof(TSConvergedReason) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSConvergedReason, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSConvergedReason) - 1 > 4 * PyLong_SHIFT) { return (TSConvergedReason) (((TSConvergedReason)-1)*(((((((((TSConvergedReason)digits[3]) << PyLong_SHIFT) | (TSConvergedReason)digits[2]) << PyLong_SHIFT) | (TSConvergedReason)digits[1]) << PyLong_SHIFT) | (TSConvergedReason)digits[0]))); } } break; case 4: if (8 * sizeof(TSConvergedReason) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(TSConvergedReason, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(TSConvergedReason) - 1 > 4 * PyLong_SHIFT) { return (TSConvergedReason) ((((((((((TSConvergedReason)digits[3]) << PyLong_SHIFT) | (TSConvergedReason)digits[2]) << PyLong_SHIFT) | (TSConvergedReason)digits[1]) << PyLong_SHIFT) | (TSConvergedReason)digits[0]))); } } break; } #endif if (sizeof(TSConvergedReason) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(TSConvergedReason, long, PyLong_AsLong(x)) } else if (sizeof(TSConvergedReason) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(TSConvergedReason, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else TSConvergedReason val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (TSConvergedReason) -1; } } else { TSConvergedReason val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (TSConvergedReason) -1; val = __Pyx_PyInt_As_TSConvergedReason(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to TSConvergedReason"); return (TSConvergedReason) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to TSConvergedReason"); return (TSConvergedReason) -1; } /* CIntFromPy */ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { const long neg_one = (long) -1, const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(long) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(long, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (long) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (long) 0; case 1: __PYX_VERIFY_RETURN_INT(long, digit, digits[0]) case 2: if (8 * sizeof(long) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) >= 2 * PyLong_SHIFT) { return (long) (((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; case 3: if (8 * sizeof(long) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) >= 3 * PyLong_SHIFT) { return (long) (((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; case 4: if (8 * sizeof(long) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) >= 4 * PyLong_SHIFT) { return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (long) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(long) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(long, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(long, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (long) 0; case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(long, digit, +digits[0]) case -2: if (8 * sizeof(long) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { return (long) (((long)-1)*(((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 2: if (8 * sizeof(long) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { return (long) ((((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case -3: if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { return (long) (((long)-1)*(((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 3: if (8 * sizeof(long) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { return (long) ((((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case -4: if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { return (long) (((long)-1)*(((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 4: if (8 * sizeof(long) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { return (long) ((((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; } #endif if (sizeof(long) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(long, long, PyLong_AsLong(x)) } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(long, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else long val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (long) -1; } } else { long val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (long) -1; val = __Pyx_PyInt_As_long(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to long"); return (long) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to long"); return (long) -1; } /* CheckBinaryVersion */ static int __Pyx_check_binary_version(void) { char ctversion[4], rtversion[4]; PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION); PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion()); if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) { char message[200]; PyOS_snprintf(message, sizeof(message), "compiletime version %s of module '%.100s' " "does not match runtime version %s", ctversion, __Pyx_MODULE_NAME, rtversion); return PyErr_WarnEx(NULL, message, 1); } return 0; } /* FunctionExport */ static int __Pyx_ExportFunction(const char *name, void (*f)(void), const char *sig) { PyObject *d = 0; PyObject *cobj = 0; union { void (*fp)(void); void *p; } tmp; d = PyObject_GetAttrString(__pyx_m, (char *)"__pyx_capi__"); if (!d) { PyErr_Clear(); d = PyDict_New(); if (!d) goto bad; Py_INCREF(d); if (PyModule_AddObject(__pyx_m, (char *)"__pyx_capi__", d) < 0) goto bad; } tmp.fp = f; #if PY_VERSION_HEX >= 0x02070000 cobj = PyCapsule_New(tmp.p, sig, 0); #else cobj = PyCObject_FromVoidPtrAndDesc(tmp.p, (void *)sig, 0); #endif if (!cobj) goto bad; if (PyDict_SetItemString(d, name, cobj) < 0) goto bad; Py_DECREF(cobj); Py_DECREF(d); return 0; bad: Py_XDECREF(cobj); Py_XDECREF(d); return -1; } /* TypeImport */ #ifndef __PYX_HAVE_RT_ImportType #define __PYX_HAVE_RT_ImportType static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict) { PyObject *py_module = 0; PyObject *result = 0; PyObject *py_name = 0; char warning[200]; Py_ssize_t basicsize; #ifdef Py_LIMITED_API PyObject *py_basicsize; #endif py_module = __Pyx_ImportModule(module_name); if (!py_module) goto bad; py_name = __Pyx_PyIdentifier_FromString(class_name); if (!py_name) goto bad; result = PyObject_GetAttr(py_module, py_name); Py_DECREF(py_name); py_name = 0; Py_DECREF(py_module); py_module = 0; if (!result) goto bad; if (!PyType_Check(result)) { PyErr_Format(PyExc_TypeError, "%.200s.%.200s is not a type object", module_name, class_name); goto bad; } #ifndef Py_LIMITED_API basicsize = ((PyTypeObject *)result)->tp_basicsize; #else py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); if (!py_basicsize) goto bad; basicsize = PyLong_AsSsize_t(py_basicsize); Py_DECREF(py_basicsize); py_basicsize = 0; if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) goto bad; #endif if (!strict && (size_t)basicsize > size) { PyOS_snprintf(warning, sizeof(warning), "%s.%s size changed, may indicate binary incompatibility. Expected %zd, got %zd", module_name, class_name, basicsize, size); if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; } else if ((size_t)basicsize != size) { PyErr_Format(PyExc_ValueError, "%.200s.%.200s has the wrong size, try recompiling. Expected %zd, got %zd", module_name, class_name, basicsize, size); goto bad; } return (PyTypeObject *)result; bad: Py_XDECREF(py_module); Py_XDECREF(result); return NULL; } #endif /* InitStrings */ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { while (t->p) { #if PY_MAJOR_VERSION < 3 if (t->is_unicode) { *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL); } else if (t->intern) { *t->p = PyString_InternFromString(t->s); } else { *t->p = PyString_FromStringAndSize(t->s, t->n - 1); } #else if (t->is_unicode | t->is_str) { if (t->intern) { *t->p = PyUnicode_InternFromString(t->s); } else if (t->encoding) { *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL); } else { *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1); } } else { *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1); } #endif if (!*t->p) return -1; ++t; } return 0; } static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) { return __Pyx_PyUnicode_FromStringAndSize(c_str, (Py_ssize_t)strlen(c_str)); } static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) { Py_ssize_t ignore; return __Pyx_PyObject_AsStringAndSize(o, &ignore); } static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { #if CYTHON_COMPILING_IN_CPYTHON && (__PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT) if ( #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII __Pyx_sys_getdefaultencoding_not_ascii && #endif PyUnicode_Check(o)) { #if PY_VERSION_HEX < 0x03030000 char* defenc_c; PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); if (!defenc) return NULL; defenc_c = PyBytes_AS_STRING(defenc); #if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII { char* end = defenc_c + PyBytes_GET_SIZE(defenc); char* c; for (c = defenc_c; c < end; c++) { if ((unsigned char) (*c) >= 128) { PyUnicode_AsASCIIString(o); return NULL; } } } #endif *length = PyBytes_GET_SIZE(defenc); return defenc_c; #else if (__Pyx_PyUnicode_READY(o) == -1) return NULL; #if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII if (PyUnicode_IS_ASCII(o)) { *length = PyUnicode_GET_LENGTH(o); return PyUnicode_AsUTF8(o); } else { PyUnicode_AsASCIIString(o); return NULL; } #else return PyUnicode_AsUTF8AndSize(o, length); #endif #endif } else #endif #if (!CYTHON_COMPILING_IN_PYPY) || (defined(PyByteArray_AS_STRING) && defined(PyByteArray_GET_SIZE)) if (PyByteArray_Check(o)) { *length = PyByteArray_GET_SIZE(o); return PyByteArray_AS_STRING(o); } else #endif { char* result; int r = PyBytes_AsStringAndSize(o, &result, length); if (unlikely(r < 0)) { return NULL; } else { return result; } } } static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) { int is_true = x == Py_True; if (is_true | (x == Py_False) | (x == Py_None)) return is_true; else return PyObject_IsTrue(x); } static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x) { PyNumberMethods *m; const char *name = NULL; PyObject *res = NULL; #if PY_MAJOR_VERSION < 3 if (PyInt_Check(x) || PyLong_Check(x)) #else if (PyLong_Check(x)) #endif return __Pyx_NewRef(x); m = Py_TYPE(x)->tp_as_number; #if PY_MAJOR_VERSION < 3 if (m && m->nb_int) { name = "int"; res = PyNumber_Int(x); } else if (m && m->nb_long) { name = "long"; res = PyNumber_Long(x); } #else if (m && m->nb_int) { name = "int"; res = PyNumber_Long(x); } #endif if (res) { #if PY_MAJOR_VERSION < 3 if (!PyInt_Check(res) && !PyLong_Check(res)) { #else if (!PyLong_Check(res)) { #endif PyErr_Format(PyExc_TypeError, "__%.4s__ returned non-%.4s (type %.200s)", name, name, Py_TYPE(res)->tp_name); Py_DECREF(res); return NULL; } } else if (!PyErr_Occurred()) { PyErr_SetString(PyExc_TypeError, "an integer is required"); } return res; } static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { Py_ssize_t ival; PyObject *x; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_CheckExact(b))) { if (sizeof(Py_ssize_t) >= sizeof(long)) return PyInt_AS_LONG(b); else return PyInt_AsSsize_t(x); } #endif if (likely(PyLong_CheckExact(b))) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)b)->ob_digit; const Py_ssize_t size = Py_SIZE(b); if (likely(__Pyx_sst_abs(size) <= 1)) { ival = likely(size) ? digits[0] : 0; if (size == -1) ival = -ival; return ival; } else { switch (size) { case 2: if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { return (Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -2: if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { return -(Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case 3: if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { return (Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -3: if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { return -(Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case 4: if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { return (Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -4: if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { return -(Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; } } #endif return PyLong_AsSsize_t(b); } x = PyNumber_Index(b); if (!x) return -1; ival = PyInt_AsSsize_t(x); Py_DECREF(x); return ival; } static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { return PyInt_FromSize_t(ival); } #endif /* Py_PYTHON_H */ petsc4py-3.7.0/src/include/0000755000175000001440000000000012711405164016274 5ustar dalcinlusers00000000000000petsc4py-3.7.0/src/include/pep3118.h0000644000175000001440000000577312711377604017571 0ustar dalcinlusers00000000000000#ifndef PETSC4PY_PEP3118_H #define PETSC4PY_PEP3118_H #include "Python.h" #include "petsc.h" #if defined(PETSC_USE_64BIT_INDICES) # define _PyPetsc_FMT_PETSC_INT "q" #else # define _PyPetsc_FMT_PETSC_INT "i" #endif #if defined(PETSC_USE_REAL_SINGLE) # define _PyPetsc_FMT_PETSC_REAL "f" # define _PyPetsc_FMT_PETSC_COMPLEX "Zf" #elif defined(PETSC_USE_REAL_DOUBLE) # define _PyPetsc_FMT_PETSC_REAL "d" # define _PyPetsc_FMT_PETSC_COMPLEX "Zd" #elif defined(PETSC_USE_REAL_LONG_DOUBLE) # define _PyPetsc_FMT_PETSC_REAL "g" # define _PyPetsc_FMT_PETSC_COMPLEX "Zg" #elif defined(PETSC_USE_REAL___FLOAT128) # define _PyPetsc_FMT_PETSC_REAL "g" # define _PyPetsc_FMT_PETSC_COMPLEX "Zg" #else # error "unsupported real precision" #endif #if defined(PETSC_USE_SCALAR_COMPLEX) # define _PyPetsc_FMT_PETSC_SCALAR _PyPetsc_FMT_PETSC_COMPLEX #elif defined(PETSC_USE_SCALAR_REAL) # define _PyPetsc_FMT_PETSC_SCALAR _PyPetsc_FMT_PETSC_REAL #else # error "unsupported scalar type" #endif PETSC_STATIC_INLINE int PyPetscBuffer_FillInfo(Py_buffer *view, void *buf, PetscInt count, char typechar, int readonly, int flags) { if (view == NULL) return 0; if (((flags & PyBUF_WRITABLE) == PyBUF_WRITABLE) && (readonly == 1)) { PyErr_SetString(PyExc_BufferError, "Object is not writable."); return -1; } view->buf = buf; switch (typechar) { case 'i': view->itemsize = sizeof(PetscInt); break; case 'r': view->itemsize = sizeof(PetscReal); break; case 's': view->itemsize = sizeof(PetscScalar); break; case 'c': view->itemsize = sizeof(PetscReal)*2; break; default: view->itemsize = 1; } view->len = count*view->itemsize; view->readonly = readonly; view->format = NULL; if ((flags & PyBUF_FORMAT) == PyBUF_FORMAT) { switch (typechar) { case 'i': view->format = (char *) _PyPetsc_FMT_PETSC_INT; break; case 'r': view->format = (char *) _PyPetsc_FMT_PETSC_REAL; break; case 's': view->format = (char *) _PyPetsc_FMT_PETSC_SCALAR; break; case 'c': view->format = (char *) _PyPetsc_FMT_PETSC_COMPLEX; break; default: view->format = (char *) "B"; } } view->ndim = 0; view->shape = NULL; view->strides = NULL; view->suboffsets = NULL; view->internal = NULL; if ((flags & PyBUF_ND) == PyBUF_ND) { view->ndim = 1; view->internal = PyMem_Malloc(2*sizeof(Py_ssize_t)); if (!view->internal) { PyErr_NoMemory(); return -1; } view->shape = (Py_ssize_t *) view->internal; view->shape[0] = view->len/view->itemsize; if ((flags & PyBUF_STRIDES) == PyBUF_STRIDES) { view->strides = view->shape + 1; view->strides[0] = view->itemsize; } } return 0; } PETSC_STATIC_INLINE void PyPetscBuffer_Release(Py_buffer *view) { if (view == NULL) return; if (view->internal) PyMem_Free(view->internal); view->internal = NULL; } #undef _PyPetsc_FMT_PETSC_INT #undef _PyPetsc_FMT_PETSC_REAL #undef _PyPetsc_FMT_PETSC_SCALAR #undef _PyPetsc_FMT_PETSC_COMPLEX #endif/*!PETSC4PY_PEP3118_H*/ petsc4py-3.7.0/src/include/compat.h0000644000175000001440000000034212711377604017736 0ustar dalcinlusers00000000000000#ifndef PETSC4PY_COMPAT_H #define PETSC4PY_COMPAT_H #include #include "compat/mpi.h" #include "compat/hdf5.h" #include "compat/mumps.h" #include "compat/hypre.h" #include "compat/tao.h" #endif/*PETSC4PY_COMPAT_H*/ petsc4py-3.7.0/src/include/petsc4py/0000755000175000001440000000000012711405164020047 5ustar dalcinlusers00000000000000petsc4py-3.7.0/src/include/petsc4py/__init__.pxd0000644000175000001440000000007012711377604022327 0ustar dalcinlusers00000000000000# Author: Lisandro Dalcin # Contact: dalcinl@gmail.com petsc4py-3.7.0/src/include/petsc4py/PETSc.pxd0000644000175000001440000001123112711377604021507 0ustar dalcinlusers00000000000000# Author: Lisandro Dalcin # Contact: dalcinl@gmail.com # -------------------------------------------------------------------- cdef extern from "petsc.h": ctypedef struct _p_MPI_Comm ctypedef _p_MPI_Comm* MPI_Comm ctypedef struct _p_PetscObject ctypedef _p_PetscObject* PetscObject struct _p_PetscViewer ctypedef _p_PetscViewer* PetscViewer struct _p_PetscRandom ctypedef _p_PetscRandom* PetscRandom struct _p_IS ctypedef _p_IS* PetscIS "IS" struct _p_ISLocalToGlobalMapping ctypedef _p_ISLocalToGlobalMapping* PetscLGMap "ISLocalToGlobalMapping" struct _p_PetscSF ctypedef _p_PetscSF* PetscSF "PetscSF" struct _p_Vec ctypedef _p_Vec* PetscVec "Vec" struct _p_VecScatter ctypedef _p_VecScatter* PetscScatter "VecScatter" struct _p_PetscSection ctypedef _p_PetscSection* PetscSection struct _p_Mat ctypedef _p_Mat* PetscMat "Mat" struct _p_MatNullSpace ctypedef _p_MatNullSpace* PetscNullSpace "MatNullSpace" struct _p_PC ctypedef _p_PC* PetscPC "PC" struct _p_KSP ctypedef _p_KSP* PetscKSP "KSP" struct _p_SNES ctypedef _p_SNES* PetscSNES "SNES" struct _p_TS ctypedef _p_TS* PetscTS "TS" struct _p_TAO "_p_Tao" ctypedef _p_TAO* PetscTAO "Tao" struct _p_AO ctypedef _p_AO* PetscAO "AO" struct _p_DM ctypedef _p_DM* PetscDM "DM" struct _p_PetscPartitioner ctypedef _p_PetscPartitioner* PetscPartitioner "PetscPartitioner" # -------------------------------------------------------------------- ctypedef public api class Comm [ type PyPetscComm_Type, object PyPetscCommObject, ]: cdef MPI_Comm comm cdef int isdup cdef object base ctypedef public api class Object [ type PyPetscObject_Type, object PyPetscObjectObject, ]: cdef __weakref__ cdef __dummy__ cdef PetscObject oval cdef PetscObject *obj cdef object get_attr(self, char name[]) cdef object set_attr(self, char name[], object attr) cdef object get_dict(self) ctypedef public api class Viewer(Object) [ type PyPetscViewer_Type, object PyPetscViewerObject, ]: cdef PetscViewer vwr ctypedef public api class Random(Object) [ type PyPetscRandom_Type, object PyPetscRandomObject, ]: cdef PetscRandom rnd ctypedef public api class IS(Object) [ type PyPetscIS_Type, object PyPetscISObject, ]: cdef PetscIS iset ctypedef public api class LGMap(Object) [ type PyPetscLGMap_Type, object PyPetscLGMapObject, ]: cdef PetscLGMap lgm ctypedef public api class SF(Object) [ type PyPetscSF_Type, object PyPetscSFObject, ]: cdef PetscSF sf ctypedef public api class Vec(Object) [ type PyPetscVec_Type, object PyPetscVecObject, ]: cdef PetscVec vec ctypedef public api class Scatter(Object) [ type PyPetscScatter_Type, object PyPetscScatterObject, ]: cdef PetscScatter sct ctypedef public api class Section(Object) [ type PyPetscSection_Type, object PyPetscSectionObject, ]: cdef PetscSection sec ctypedef public api class Mat(Object) [ type PyPetscMat_Type, object PyPetscMatObject, ]: cdef PetscMat mat ctypedef public api class NullSpace(Object) [ type PyPetscNullSpace_Type, object PyPetscNullSpaceObject, ]: cdef PetscNullSpace nsp ctypedef public api class PC(Object) [ type PyPetscPC_Type, object PyPetscPCObject, ]: cdef PetscPC pc ctypedef public api class KSP(Object) [ type PyPetscKSP_Type, object PyPetscKSPObject, ]: cdef PetscKSP ksp ctypedef public api class SNES(Object) [ type PyPetscSNES_Type, object PyPetscSNESObject, ]: cdef PetscSNES snes ctypedef public api class TS(Object) [ type PyPetscTS_Type, object PyPetscTSObject, ]: cdef PetscTS ts ctypedef public api class TAO(Object) [ type PyPetscTAO_Type, object PyPetscTAOObject, ]: cdef PetscTAO tao ctypedef public api class AO(Object) [ type PyPetscAO_Type, object PyPetscAOObject, ]: cdef PetscAO ao ctypedef public api class DM(Object) [ type PyPetscDM_Type, object PyPetscDMObject, ]: cdef PetscDM dm ctypedef public api class Partitioner(Object) [ type PyPetscPartitioner_Type, object PyPetscPartitionerObject, ]: cdef PetscPartitioner part # -------------------------------------------------------------------- cdef MPI_Comm GetComm(object, MPI_Comm) except * cdef MPI_Comm GetCommDefault() cdef int PyPetscType_Register(int, type) except -1 cdef type PyPetscType_Lookup(int) # -------------------------------------------------------------------- petsc4py-3.7.0/src/include/petsc4py/petsc4py.PETSc.h0000644000175000001440000002176212711405031022711 0ustar dalcinlusers00000000000000/* Generated by Cython 0.24 */ #ifndef __PYX_HAVE__petsc4py__PETSc #define __PYX_HAVE__petsc4py__PETSc struct PyPetscCommObject; struct PyPetscObjectObject; struct PyPetscViewerObject; struct PyPetscRandomObject; struct PyPetscISObject; struct PyPetscLGMapObject; struct PyPetscSFObject; struct PyPetscVecObject; struct PyPetscScatterObject; struct PyPetscSectionObject; struct PyPetscMatObject; struct PyPetscNullSpaceObject; struct PyPetscPCObject; struct PyPetscKSPObject; struct PyPetscSNESObject; struct PyPetscTSObject; struct PyPetscTAOObject; struct PyPetscAOObject; struct PyPetscDMObject; struct PyPetscPartitionerObject; /* "petsc4py/PETSc.pxd":70 * # -------------------------------------------------------------------- * * ctypedef public api class Comm [ # <<<<<<<<<<<<<< * type PyPetscComm_Type, * object PyPetscCommObject, */ struct PyPetscCommObject { PyObject_HEAD MPI_Comm comm; int isdup; PyObject *base; }; typedef struct PyPetscCommObject PyPetscCommObject; /* "petsc4py/PETSc.pxd":78 * cdef object base * * ctypedef public api class Object [ # <<<<<<<<<<<<<< * type PyPetscObject_Type, * object PyPetscObjectObject, */ struct PyPetscObjectObject { PyObject_HEAD struct __pyx_vtabstruct_8petsc4py_5PETSc_Object *__pyx_vtab; PyObject *__weakref__; PyObject *__pyx___dummy__; PetscObject oval; PetscObject *obj; }; typedef struct PyPetscObjectObject PyPetscObjectObject; /* "petsc4py/PETSc.pxd":90 * cdef object get_dict(self) * * ctypedef public api class Viewer(Object) [ # <<<<<<<<<<<<<< * type PyPetscViewer_Type, * object PyPetscViewerObject, */ struct PyPetscViewerObject { struct PyPetscObjectObject __pyx_base; PetscViewer vwr; }; typedef struct PyPetscViewerObject PyPetscViewerObject; /* "petsc4py/PETSc.pxd":96 * cdef PetscViewer vwr * * ctypedef public api class Random(Object) [ # <<<<<<<<<<<<<< * type PyPetscRandom_Type, * object PyPetscRandomObject, */ struct PyPetscRandomObject { struct PyPetscObjectObject __pyx_base; PetscRandom rnd; }; typedef struct PyPetscRandomObject PyPetscRandomObject; /* "petsc4py/PETSc.pxd":102 * cdef PetscRandom rnd * * ctypedef public api class IS(Object) [ # <<<<<<<<<<<<<< * type PyPetscIS_Type, * object PyPetscISObject, */ struct PyPetscISObject { struct PyPetscObjectObject __pyx_base; IS iset; }; typedef struct PyPetscISObject PyPetscISObject; /* "petsc4py/PETSc.pxd":108 * cdef PetscIS iset * * ctypedef public api class LGMap(Object) [ # <<<<<<<<<<<<<< * type PyPetscLGMap_Type, * object PyPetscLGMapObject, */ struct PyPetscLGMapObject { struct PyPetscObjectObject __pyx_base; ISLocalToGlobalMapping lgm; }; typedef struct PyPetscLGMapObject PyPetscLGMapObject; /* "petsc4py/PETSc.pxd":114 * cdef PetscLGMap lgm * * ctypedef public api class SF(Object) [ # <<<<<<<<<<<<<< * type PyPetscSF_Type, * object PyPetscSFObject, */ struct PyPetscSFObject { struct PyPetscObjectObject __pyx_base; PetscSF sf; }; typedef struct PyPetscSFObject PyPetscSFObject; /* "petsc4py/PETSc.pxd":120 * cdef PetscSF sf * * ctypedef public api class Vec(Object) [ # <<<<<<<<<<<<<< * type PyPetscVec_Type, * object PyPetscVecObject, */ struct PyPetscVecObject { struct PyPetscObjectObject __pyx_base; Vec vec; }; typedef struct PyPetscVecObject PyPetscVecObject; /* "petsc4py/PETSc.pxd":126 * cdef PetscVec vec * * ctypedef public api class Scatter(Object) [ # <<<<<<<<<<<<<< * type PyPetscScatter_Type, * object PyPetscScatterObject, */ struct PyPetscScatterObject { struct PyPetscObjectObject __pyx_base; VecScatter sct; }; typedef struct PyPetscScatterObject PyPetscScatterObject; /* "petsc4py/PETSc.pxd":132 * cdef PetscScatter sct * * ctypedef public api class Section(Object) [ # <<<<<<<<<<<<<< * type PyPetscSection_Type, * object PyPetscSectionObject, */ struct PyPetscSectionObject { struct PyPetscObjectObject __pyx_base; PetscSection sec; }; typedef struct PyPetscSectionObject PyPetscSectionObject; /* "petsc4py/PETSc.pxd":138 * cdef PetscSection sec * * ctypedef public api class Mat(Object) [ # <<<<<<<<<<<<<< * type PyPetscMat_Type, * object PyPetscMatObject, */ struct PyPetscMatObject { struct PyPetscObjectObject __pyx_base; Mat mat; }; typedef struct PyPetscMatObject PyPetscMatObject; /* "petsc4py/PETSc.pxd":144 * cdef PetscMat mat * * ctypedef public api class NullSpace(Object) [ # <<<<<<<<<<<<<< * type PyPetscNullSpace_Type, * object PyPetscNullSpaceObject, */ struct PyPetscNullSpaceObject { struct PyPetscObjectObject __pyx_base; MatNullSpace nsp; }; typedef struct PyPetscNullSpaceObject PyPetscNullSpaceObject; /* "petsc4py/PETSc.pxd":150 * cdef PetscNullSpace nsp * * ctypedef public api class PC(Object) [ # <<<<<<<<<<<<<< * type PyPetscPC_Type, * object PyPetscPCObject, */ struct PyPetscPCObject { struct PyPetscObjectObject __pyx_base; PC pc; }; typedef struct PyPetscPCObject PyPetscPCObject; /* "petsc4py/PETSc.pxd":156 * cdef PetscPC pc * * ctypedef public api class KSP(Object) [ # <<<<<<<<<<<<<< * type PyPetscKSP_Type, * object PyPetscKSPObject, */ struct PyPetscKSPObject { struct PyPetscObjectObject __pyx_base; KSP ksp; }; typedef struct PyPetscKSPObject PyPetscKSPObject; /* "petsc4py/PETSc.pxd":162 * cdef PetscKSP ksp * * ctypedef public api class SNES(Object) [ # <<<<<<<<<<<<<< * type PyPetscSNES_Type, * object PyPetscSNESObject, */ struct PyPetscSNESObject { struct PyPetscObjectObject __pyx_base; SNES snes; }; typedef struct PyPetscSNESObject PyPetscSNESObject; /* "petsc4py/PETSc.pxd":168 * cdef PetscSNES snes * * ctypedef public api class TS(Object) [ # <<<<<<<<<<<<<< * type PyPetscTS_Type, * object PyPetscTSObject, */ struct PyPetscTSObject { struct PyPetscObjectObject __pyx_base; TS ts; }; typedef struct PyPetscTSObject PyPetscTSObject; /* "petsc4py/PETSc.pxd":174 * cdef PetscTS ts * * ctypedef public api class TAO(Object) [ # <<<<<<<<<<<<<< * type PyPetscTAO_Type, * object PyPetscTAOObject, */ struct PyPetscTAOObject { struct PyPetscObjectObject __pyx_base; Tao tao; }; typedef struct PyPetscTAOObject PyPetscTAOObject; /* "petsc4py/PETSc.pxd":180 * cdef PetscTAO tao * * ctypedef public api class AO(Object) [ # <<<<<<<<<<<<<< * type PyPetscAO_Type, * object PyPetscAOObject, */ struct PyPetscAOObject { struct PyPetscObjectObject __pyx_base; AO ao; }; typedef struct PyPetscAOObject PyPetscAOObject; /* "petsc4py/PETSc.pxd":186 * cdef PetscAO ao * * ctypedef public api class DM(Object) [ # <<<<<<<<<<<<<< * type PyPetscDM_Type, * object PyPetscDMObject, */ struct PyPetscDMObject { struct PyPetscObjectObject __pyx_base; DM dm; }; typedef struct PyPetscDMObject PyPetscDMObject; /* "petsc4py/PETSc.pxd":192 * cdef PetscDM dm * * ctypedef public api class Partitioner(Object) [ # <<<<<<<<<<<<<< * type PyPetscPartitioner_Type, * object PyPetscPartitionerObject, */ struct PyPetscPartitionerObject { struct PyPetscObjectObject __pyx_base; PetscPartitioner part; }; typedef struct PyPetscPartitionerObject PyPetscPartitionerObject; #ifndef __PYX_HAVE_API__petsc4py__PETSc #ifndef __PYX_EXTERN_C #ifdef __cplusplus #define __PYX_EXTERN_C extern "C" #else #define __PYX_EXTERN_C extern #endif #endif #ifndef DL_IMPORT #define DL_IMPORT(_T) _T #endif __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscComm_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscObject_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscViewer_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscRandom_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscIS_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscLGMap_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscSF_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscVec_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscScatter_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscSection_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscMat_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscNullSpace_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscPC_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscKSP_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscSNES_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscTS_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscTAO_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscAO_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscDM_Type; __PYX_EXTERN_C DL_IMPORT(PyTypeObject) PyPetscPartitioner_Type; #endif /* !__PYX_HAVE_API__petsc4py__PETSc */ #if PY_MAJOR_VERSION < 3 PyMODINIT_FUNC initPETSc(void); #else PyMODINIT_FUNC PyInit_PETSc(void); #endif #endif /* !__PYX_HAVE__petsc4py__PETSc */ petsc4py-3.7.0/src/include/petsc4py/numpy.h0000644000175000001440000000271212711377604021401 0ustar dalcinlusers00000000000000#ifndef PETSC4PY_NUMPY_H #define PETSC4PY_NUMPY_H #include "Python.h" /* #ifndef NPY_NO_DEPRECATED_API #define NPY_NO_DEPRECATED_API NPY_API_VERSION #endif */ #include "numpy/arrayobject.h" #ifndef NPY_ARRAY_ALIGNED #define NPY_ARRAY_ALIGNED NPY_ALIGNED #endif #ifndef NPY_ARRAY_WRITEABLE #define NPY_ARRAY_WRITEABLE NPY_WRITEABLE #endif #ifndef NPY_ARRAY_NOTSWAPPED #define NPY_ARRAY_NOTSWAPPED NPY_NOTSWAPPED #endif #ifndef NPY_ARRAY_CARRAY #define NPY_ARRAY_CARRAY NPY_CARRAY #endif #ifndef NPY_ARRAY_FARRAY #define NPY_ARRAY_FARRAY NPY_FARRAY #endif #include "petsc.h" #if defined(PETSC_USE_64BIT_INDICES) # define NPY_PETSC_INT NPY_LONGLONG #else # define NPY_PETSC_INT NPY_INT #endif #if defined(PETSC_USE_REAL_SINGLE) # define NPY_PETSC_REAL NPY_FLOAT # define NPY_PETSC_COMPLEX NPY_CFLOAT #elif defined(PETSC_USE_REAL_DOUBLE) # define NPY_PETSC_REAL NPY_DOUBLE # define NPY_PETSC_COMPLEX NPY_CDOUBLE #elif defined(PETSC_USE_REAL_LONG_DOUBLE) # define NPY_PETSC_REAL NPY_LONGDOUBLE # define NPY_PETSC_COMPLEX NPY_CLONGDOUBLE #elif defined(PETSC_USE_REAL___FLOAT128) # define NPY_PETSC_REAL NPY_FLOAT128 # define NPY_PETSC_COMPLEX NPY_COMPLEX256 #else # error "unsupported real precision" #endif #if defined(PETSC_USE_SCALAR_COMPLEX) # define NPY_PETSC_SCALAR NPY_PETSC_COMPLEX #elif defined(PETSC_USE_SCALAR_REAL) # define NPY_PETSC_SCALAR NPY_PETSC_REAL #else # error "unsupported scalar type" #endif #endif /* !PETSC4PY_NUMPY_H */ petsc4py-3.7.0/src/include/petsc4py/petsc4py.h0000644000175000001440000000047612711377604022011 0ustar dalcinlusers00000000000000/* Author: Lisandro Dalcin */ /* Contact: dalcinl@gmail.com */ #ifndef PETSC4PY_H #define PETSC4PY_H #include #include #include "petsc4py.PETSc_api.h" static int import_petsc4py(void) { if (import_petsc4py__PETSc() < 0) goto bad; return 0; bad: return -1; } #endif /* !PETSC4PY_H */ petsc4py-3.7.0/src/include/petsc4py/__init__.pyx0000644000175000001440000000007012711377604022354 0ustar dalcinlusers00000000000000# Author: Lisandro Dalcin # Contact: dalcinl@gmail.com petsc4py-3.7.0/src/include/petsc4py/petsc4py.PETSc_api.h0000644000175000001440000005507312711405031023544 0ustar dalcinlusers00000000000000/* Generated by Cython 0.24 */ #ifndef __PYX_HAVE_API__petsc4py__PETSc #define __PYX_HAVE_API__petsc4py__PETSc #include "Python.h" #include "petsc4py.PETSc.h" static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Comm = 0; #define PyPetscComm_Type (*__pyx_ptype_8petsc4py_5PETSc_Comm) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Object = 0; #define PyPetscObject_Type (*__pyx_ptype_8petsc4py_5PETSc_Object) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Viewer = 0; #define PyPetscViewer_Type (*__pyx_ptype_8petsc4py_5PETSc_Viewer) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Random = 0; #define PyPetscRandom_Type (*__pyx_ptype_8petsc4py_5PETSc_Random) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_IS = 0; #define PyPetscIS_Type (*__pyx_ptype_8petsc4py_5PETSc_IS) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_LGMap = 0; #define PyPetscLGMap_Type (*__pyx_ptype_8petsc4py_5PETSc_LGMap) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_SF = 0; #define PyPetscSF_Type (*__pyx_ptype_8petsc4py_5PETSc_SF) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Vec = 0; #define PyPetscVec_Type (*__pyx_ptype_8petsc4py_5PETSc_Vec) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Scatter = 0; #define PyPetscScatter_Type (*__pyx_ptype_8petsc4py_5PETSc_Scatter) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Section = 0; #define PyPetscSection_Type (*__pyx_ptype_8petsc4py_5PETSc_Section) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Mat = 0; #define PyPetscMat_Type (*__pyx_ptype_8petsc4py_5PETSc_Mat) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_NullSpace = 0; #define PyPetscNullSpace_Type (*__pyx_ptype_8petsc4py_5PETSc_NullSpace) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_PC = 0; #define PyPetscPC_Type (*__pyx_ptype_8petsc4py_5PETSc_PC) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_KSP = 0; #define PyPetscKSP_Type (*__pyx_ptype_8petsc4py_5PETSc_KSP) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_SNES = 0; #define PyPetscSNES_Type (*__pyx_ptype_8petsc4py_5PETSc_SNES) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_TS = 0; #define PyPetscTS_Type (*__pyx_ptype_8petsc4py_5PETSc_TS) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_TAO = 0; #define PyPetscTAO_Type (*__pyx_ptype_8petsc4py_5PETSc_TAO) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_AO = 0; #define PyPetscAO_Type (*__pyx_ptype_8petsc4py_5PETSc_AO) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_DM = 0; #define PyPetscDM_Type (*__pyx_ptype_8petsc4py_5PETSc_DM) static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Partitioner = 0; #define PyPetscPartitioner_Type (*__pyx_ptype_8petsc4py_5PETSc_Partitioner) static int (*__pyx_api_f_8petsc4py_5PETSc_PyPetscError_Set)(int) = 0; #define PyPetscError_Set __pyx_api_f_8petsc4py_5PETSc_PyPetscError_Set static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscComm_New)(MPI_Comm) = 0; #define PyPetscComm_New __pyx_api_f_8petsc4py_5PETSc_PyPetscComm_New static MPI_Comm (*__pyx_api_f_8petsc4py_5PETSc_PyPetscComm_Get)(PyObject *) = 0; #define PyPetscComm_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscComm_Get static MPI_Comm *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscComm_GetPtr)(PyObject *) = 0; #define PyPetscComm_GetPtr __pyx_api_f_8petsc4py_5PETSc_PyPetscComm_GetPtr static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscObject_New)(PetscObject) = 0; #define PyPetscObject_New __pyx_api_f_8petsc4py_5PETSc_PyPetscObject_New static PetscObject (*__pyx_api_f_8petsc4py_5PETSc_PyPetscObject_Get)(PyObject *) = 0; #define PyPetscObject_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscObject_Get static PetscObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscObject_GetPtr)(PyObject *) = 0; #define PyPetscObject_GetPtr __pyx_api_f_8petsc4py_5PETSc_PyPetscObject_GetPtr static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscViewer_New)(PetscViewer) = 0; #define PyPetscViewer_New __pyx_api_f_8petsc4py_5PETSc_PyPetscViewer_New static PetscViewer (*__pyx_api_f_8petsc4py_5PETSc_PyPetscViewer_Get)(PyObject *) = 0; #define PyPetscViewer_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscViewer_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscRandom_New)(PetscRandom) = 0; #define PyPetscRandom_New __pyx_api_f_8petsc4py_5PETSc_PyPetscRandom_New static PetscRandom (*__pyx_api_f_8petsc4py_5PETSc_PyPetscRandom_Get)(PyObject *) = 0; #define PyPetscRandom_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscRandom_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscIS_New)(IS) = 0; #define PyPetscIS_New __pyx_api_f_8petsc4py_5PETSc_PyPetscIS_New static IS (*__pyx_api_f_8petsc4py_5PETSc_PyPetscIS_Get)(PyObject *) = 0; #define PyPetscIS_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscIS_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscLGMap_New)(ISLocalToGlobalMapping) = 0; #define PyPetscLGMap_New __pyx_api_f_8petsc4py_5PETSc_PyPetscLGMap_New static ISLocalToGlobalMapping (*__pyx_api_f_8petsc4py_5PETSc_PyPetscLGMap_Get)(PyObject *) = 0; #define PyPetscLGMap_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscLGMap_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscSF_New)(PetscSF) = 0; #define PyPetscSF_New __pyx_api_f_8petsc4py_5PETSc_PyPetscSF_New static PetscSF (*__pyx_api_f_8petsc4py_5PETSc_PyPetscSF_Get)(PyObject *) = 0; #define PyPetscSF_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscSF_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscVec_New)(Vec) = 0; #define PyPetscVec_New __pyx_api_f_8petsc4py_5PETSc_PyPetscVec_New static Vec (*__pyx_api_f_8petsc4py_5PETSc_PyPetscVec_Get)(PyObject *) = 0; #define PyPetscVec_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscVec_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscScatter_New)(VecScatter) = 0; #define PyPetscScatter_New __pyx_api_f_8petsc4py_5PETSc_PyPetscScatter_New static VecScatter (*__pyx_api_f_8petsc4py_5PETSc_PyPetscScatter_Get)(PyObject *) = 0; #define PyPetscScatter_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscScatter_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscSection_New)(PetscSection) = 0; #define PyPetscSection_New __pyx_api_f_8petsc4py_5PETSc_PyPetscSection_New static PetscSection (*__pyx_api_f_8petsc4py_5PETSc_PyPetscSection_Get)(PyObject *) = 0; #define PyPetscSection_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscSection_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscMat_New)(Mat) = 0; #define PyPetscMat_New __pyx_api_f_8petsc4py_5PETSc_PyPetscMat_New static Mat (*__pyx_api_f_8petsc4py_5PETSc_PyPetscMat_Get)(PyObject *) = 0; #define PyPetscMat_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscMat_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscPC_New)(PC) = 0; #define PyPetscPC_New __pyx_api_f_8petsc4py_5PETSc_PyPetscPC_New static PC (*__pyx_api_f_8petsc4py_5PETSc_PyPetscPC_Get)(PyObject *) = 0; #define PyPetscPC_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscPC_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscKSP_New)(KSP) = 0; #define PyPetscKSP_New __pyx_api_f_8petsc4py_5PETSc_PyPetscKSP_New static KSP (*__pyx_api_f_8petsc4py_5PETSc_PyPetscKSP_Get)(PyObject *) = 0; #define PyPetscKSP_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscKSP_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscSNES_New)(SNES) = 0; #define PyPetscSNES_New __pyx_api_f_8petsc4py_5PETSc_PyPetscSNES_New static SNES (*__pyx_api_f_8petsc4py_5PETSc_PyPetscSNES_Get)(PyObject *) = 0; #define PyPetscSNES_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscSNES_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscTS_New)(TS) = 0; #define PyPetscTS_New __pyx_api_f_8petsc4py_5PETSc_PyPetscTS_New static TS (*__pyx_api_f_8petsc4py_5PETSc_PyPetscTS_Get)(PyObject *) = 0; #define PyPetscTS_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscTS_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscTAO_New)(Tao) = 0; #define PyPetscTAO_New __pyx_api_f_8petsc4py_5PETSc_PyPetscTAO_New static Tao (*__pyx_api_f_8petsc4py_5PETSc_PyPetscTAO_Get)(PyObject *) = 0; #define PyPetscTAO_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscTAO_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscAO_New)(AO) = 0; #define PyPetscAO_New __pyx_api_f_8petsc4py_5PETSc_PyPetscAO_New static AO (*__pyx_api_f_8petsc4py_5PETSc_PyPetscAO_Get)(PyObject *) = 0; #define PyPetscAO_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscAO_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscDM_New)(DM) = 0; #define PyPetscDM_New __pyx_api_f_8petsc4py_5PETSc_PyPetscDM_New static DM (*__pyx_api_f_8petsc4py_5PETSc_PyPetscDM_Get)(PyObject *) = 0; #define PyPetscDM_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscDM_Get static PyObject *(*__pyx_api_f_8petsc4py_5PETSc_PyPetscPartitioner_New)(PetscPartitioner) = 0; #define PyPetscPartitioner_New __pyx_api_f_8petsc4py_5PETSc_PyPetscPartitioner_New static PetscPartitioner (*__pyx_api_f_8petsc4py_5PETSc_PyPetscPartitioner_Get)(PyObject *) = 0; #define PyPetscPartitioner_Get __pyx_api_f_8petsc4py_5PETSc_PyPetscPartitioner_Get #if !defined(__Pyx_PyIdentifier_FromString) #if PY_MAJOR_VERSION < 3 #define __Pyx_PyIdentifier_FromString(s) PyString_FromString(s) #else #define __Pyx_PyIdentifier_FromString(s) PyUnicode_FromString(s) #endif #endif #ifndef __PYX_HAVE_RT_ImportModule #define __PYX_HAVE_RT_ImportModule static PyObject *__Pyx_ImportModule(const char *name) { PyObject *py_name = 0; PyObject *py_module = 0; py_name = __Pyx_PyIdentifier_FromString(name); if (!py_name) goto bad; py_module = PyImport_Import(py_name); Py_DECREF(py_name); return py_module; bad: Py_XDECREF(py_name); return 0; } #endif #ifndef __PYX_HAVE_RT_ImportFunction #define __PYX_HAVE_RT_ImportFunction static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) { PyObject *d = 0; PyObject *cobj = 0; union { void (*fp)(void); void *p; } tmp; d = PyObject_GetAttrString(module, (char *)"__pyx_capi__"); if (!d) goto bad; cobj = PyDict_GetItemString(d, funcname); if (!cobj) { PyErr_Format(PyExc_ImportError, "%.200s does not export expected C function %.200s", PyModule_GetName(module), funcname); goto bad; } #if PY_VERSION_HEX >= 0x02070000 if (!PyCapsule_IsValid(cobj, sig)) { PyErr_Format(PyExc_TypeError, "C function %.200s.%.200s has wrong signature (expected %.500s, got %.500s)", PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj)); goto bad; } tmp.p = PyCapsule_GetPointer(cobj, sig); #else {const char *desc, *s1, *s2; desc = (const char *)PyCObject_GetDesc(cobj); if (!desc) goto bad; s1 = desc; s2 = sig; while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; } if (*s1 != *s2) { PyErr_Format(PyExc_TypeError, "C function %.200s.%.200s has wrong signature (expected %.500s, got %.500s)", PyModule_GetName(module), funcname, sig, desc); goto bad; } tmp.p = PyCObject_AsVoidPtr(cobj);} #endif *f = tmp.fp; if (!(*f)) goto bad; Py_DECREF(d); return 0; bad: Py_XDECREF(d); return -1; } #endif #ifndef __PYX_HAVE_RT_ImportType #define __PYX_HAVE_RT_ImportType static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict) { PyObject *py_module = 0; PyObject *result = 0; PyObject *py_name = 0; char warning[200]; Py_ssize_t basicsize; #ifdef Py_LIMITED_API PyObject *py_basicsize; #endif py_module = __Pyx_ImportModule(module_name); if (!py_module) goto bad; py_name = __Pyx_PyIdentifier_FromString(class_name); if (!py_name) goto bad; result = PyObject_GetAttr(py_module, py_name); Py_DECREF(py_name); py_name = 0; Py_DECREF(py_module); py_module = 0; if (!result) goto bad; if (!PyType_Check(result)) { PyErr_Format(PyExc_TypeError, "%.200s.%.200s is not a type object", module_name, class_name); goto bad; } #ifndef Py_LIMITED_API basicsize = ((PyTypeObject *)result)->tp_basicsize; #else py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); if (!py_basicsize) goto bad; basicsize = PyLong_AsSsize_t(py_basicsize); Py_DECREF(py_basicsize); py_basicsize = 0; if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) goto bad; #endif if (!strict && (size_t)basicsize > size) { PyOS_snprintf(warning, sizeof(warning), "%s.%s size changed, may indicate binary incompatibility. Expected %zd, got %zd", module_name, class_name, basicsize, size); if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; } else if ((size_t)basicsize != size) { PyErr_Format(PyExc_ValueError, "%.200s.%.200s has the wrong size, try recompiling. Expected %zd, got %zd", module_name, class_name, basicsize, size); goto bad; } return (PyTypeObject *)result; bad: Py_XDECREF(py_module); Py_XDECREF(result); return NULL; } #endif static int import_petsc4py__PETSc(void) { PyObject *module = 0; module = __Pyx_ImportModule("petsc4py.PETSc"); if (!module) goto bad; if (__Pyx_ImportFunction(module, "PyPetscError_Set", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscError_Set, "int (int)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscComm_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscComm_New, "PyObject *(MPI_Comm)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscComm_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscComm_Get, "MPI_Comm (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscComm_GetPtr", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscComm_GetPtr, "MPI_Comm *(PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscObject_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscObject_New, "PyObject *(PetscObject)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscObject_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscObject_Get, "PetscObject (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscObject_GetPtr", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscObject_GetPtr, "PetscObject *(PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscViewer_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscViewer_New, "PyObject *(PetscViewer)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscViewer_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscViewer_Get, "PetscViewer (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscRandom_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscRandom_New, "PyObject *(PetscRandom)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscRandom_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscRandom_Get, "PetscRandom (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscIS_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscIS_New, "PyObject *(IS)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscIS_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscIS_Get, "IS (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscLGMap_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscLGMap_New, "PyObject *(ISLocalToGlobalMapping)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscLGMap_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscLGMap_Get, "ISLocalToGlobalMapping (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscSF_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscSF_New, "PyObject *(PetscSF)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscSF_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscSF_Get, "PetscSF (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscVec_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscVec_New, "PyObject *(Vec)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscVec_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscVec_Get, "Vec (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscScatter_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscScatter_New, "PyObject *(VecScatter)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscScatter_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscScatter_Get, "VecScatter (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscSection_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscSection_New, "PyObject *(PetscSection)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscSection_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscSection_Get, "PetscSection (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscMat_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscMat_New, "PyObject *(Mat)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscMat_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscMat_Get, "Mat (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscPC_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscPC_New, "PyObject *(PC)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscPC_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscPC_Get, "PC (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscKSP_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscKSP_New, "PyObject *(KSP)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscKSP_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscKSP_Get, "KSP (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscSNES_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscSNES_New, "PyObject *(SNES)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscSNES_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscSNES_Get, "SNES (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscTS_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscTS_New, "PyObject *(TS)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscTS_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscTS_Get, "TS (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscTAO_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscTAO_New, "PyObject *(Tao)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscTAO_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscTAO_Get, "Tao (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscAO_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscAO_New, "PyObject *(AO)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscAO_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscAO_Get, "AO (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscDM_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscDM_New, "PyObject *(DM)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscDM_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscDM_Get, "DM (PyObject *)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscPartitioner_New", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscPartitioner_New, "PyObject *(PetscPartitioner)") < 0) goto bad; if (__Pyx_ImportFunction(module, "PyPetscPartitioner_Get", (void (**)(void))&__pyx_api_f_8petsc4py_5PETSc_PyPetscPartitioner_Get, "PetscPartitioner (PyObject *)") < 0) goto bad; Py_DECREF(module); module = 0; __pyx_ptype_8petsc4py_5PETSc_Comm = __Pyx_ImportType("petsc4py.PETSc", "Comm", sizeof(struct PyPetscCommObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_Comm) goto bad; __pyx_ptype_8petsc4py_5PETSc_Object = __Pyx_ImportType("petsc4py.PETSc", "Object", sizeof(struct PyPetscObjectObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_Object) goto bad; __pyx_ptype_8petsc4py_5PETSc_Viewer = __Pyx_ImportType("petsc4py.PETSc", "Viewer", sizeof(struct PyPetscViewerObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_Viewer) goto bad; __pyx_ptype_8petsc4py_5PETSc_Random = __Pyx_ImportType("petsc4py.PETSc", "Random", sizeof(struct PyPetscRandomObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_Random) goto bad; __pyx_ptype_8petsc4py_5PETSc_IS = __Pyx_ImportType("petsc4py.PETSc", "IS", sizeof(struct PyPetscISObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_IS) goto bad; __pyx_ptype_8petsc4py_5PETSc_LGMap = __Pyx_ImportType("petsc4py.PETSc", "LGMap", sizeof(struct PyPetscLGMapObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_LGMap) goto bad; __pyx_ptype_8petsc4py_5PETSc_SF = __Pyx_ImportType("petsc4py.PETSc", "SF", sizeof(struct PyPetscSFObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_SF) goto bad; __pyx_ptype_8petsc4py_5PETSc_Vec = __Pyx_ImportType("petsc4py.PETSc", "Vec", sizeof(struct PyPetscVecObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_Vec) goto bad; __pyx_ptype_8petsc4py_5PETSc_Scatter = __Pyx_ImportType("petsc4py.PETSc", "Scatter", sizeof(struct PyPetscScatterObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_Scatter) goto bad; __pyx_ptype_8petsc4py_5PETSc_Section = __Pyx_ImportType("petsc4py.PETSc", "Section", sizeof(struct PyPetscSectionObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_Section) goto bad; __pyx_ptype_8petsc4py_5PETSc_Mat = __Pyx_ImportType("petsc4py.PETSc", "Mat", sizeof(struct PyPetscMatObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_Mat) goto bad; __pyx_ptype_8petsc4py_5PETSc_NullSpace = __Pyx_ImportType("petsc4py.PETSc", "NullSpace", sizeof(struct PyPetscNullSpaceObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_NullSpace) goto bad; __pyx_ptype_8petsc4py_5PETSc_PC = __Pyx_ImportType("petsc4py.PETSc", "PC", sizeof(struct PyPetscPCObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_PC) goto bad; __pyx_ptype_8petsc4py_5PETSc_KSP = __Pyx_ImportType("petsc4py.PETSc", "KSP", sizeof(struct PyPetscKSPObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_KSP) goto bad; __pyx_ptype_8petsc4py_5PETSc_SNES = __Pyx_ImportType("petsc4py.PETSc", "SNES", sizeof(struct PyPetscSNESObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_SNES) goto bad; __pyx_ptype_8petsc4py_5PETSc_TS = __Pyx_ImportType("petsc4py.PETSc", "TS", sizeof(struct PyPetscTSObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_TS) goto bad; __pyx_ptype_8petsc4py_5PETSc_TAO = __Pyx_ImportType("petsc4py.PETSc", "TAO", sizeof(struct PyPetscTAOObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_TAO) goto bad; __pyx_ptype_8petsc4py_5PETSc_AO = __Pyx_ImportType("petsc4py.PETSc", "AO", sizeof(struct PyPetscAOObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_AO) goto bad; __pyx_ptype_8petsc4py_5PETSc_DM = __Pyx_ImportType("petsc4py.PETSc", "DM", sizeof(struct PyPetscDMObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_DM) goto bad; __pyx_ptype_8petsc4py_5PETSc_Partitioner = __Pyx_ImportType("petsc4py.PETSc", "Partitioner", sizeof(struct PyPetscPartitionerObject), 1); if (!__pyx_ptype_8petsc4py_5PETSc_Partitioner) goto bad; return 0; bad: Py_XDECREF(module); return -1; } #endif /* !__PYX_HAVE_API__petsc4py__PETSc */ petsc4py-3.7.0/src/include/petsc4py/petsc4py.i0000644000175000001440000004615412711377604022015 0ustar dalcinlusers00000000000000/* Author: Lisandro Dalcin */ /* Contact: dalcinl@gmail.com */ /* ---------------------------------------------------------------- */ %header %{#include "petsc4py/petsc4py.h"%} %init %{import_petsc4py();%} /* ---------------------------------------------------------------- */ %runtime %{ SWIGINTERNINLINE PyObject* SWIG_getattr_this(PyObject* obj) { if (!obj) return NULL; obj = PyObject_GetAttr(obj, SWIG_This()); if (!obj) PyErr_Clear(); return obj; } SWIGINTERNINLINE int SWIG_convert_ptr(PyObject *obj, void **ptr, swig_type_info *ty, int flags) { int res = SWIG_ConvertPtr(obj, ptr, ty, flags); if (!SWIG_IsOK(res)) { PyObject* _this = SWIG_getattr_this(obj); res = SWIG_ConvertPtr(_this, ptr, ty, flags); Py_XDECREF(_this); } return res; } #undef SWIG_ConvertPtr #define SWIG_ConvertPtr(obj, pptr, type, flags) \ SWIG_convert_ptr(obj, pptr, type, flags) %} /* ---------------------------------------------------------------- */ /* ---------------------------------------------------------------- */ /* PETSc Error Codes */ /* ---------------------------------------------------------------- */ %define %petsc4py_errt(Pkg, PyType, Type) %wrapper %{ #ifndef Py##Pkg##_ChkErrQ #define Py##Pkg##_ChkErrQ(ierr) \ do { \ if (ierr != 0) { \ Py##Pkg##PyType##_Set((ierr)); SWIG_fail; \ } \ } while (0) #endif /* defined Py##Pkg##_ChkErrQ */ %} %typemap(out,noblock=1) Type { Py##Pkg##_ChkErrQ($1); %set_output(VOID_Object); } %enddef /* ---------------------------------------------------------------- */ /* ---------------------------------------------------------------- */ /* Numeric Types */ /* ---------------------------------------------------------------- */ %define SWIG_TYPECHECK_PETSC_INT SWIG_TYPECHECK_INT32 %enddef %define SWIG_TYPECHECK_PETSC_REAL SWIG_TYPECHECK_DOUBLE %enddef %define SWIG_TYPECHECK_PETSC_COMPLEX SWIG_TYPECHECK_CPLXDBL %enddef %define SWIG_TYPECHECK_PETSC_SCALAR SWIG_TYPECHECK_CPLXDBL %enddef /* PetscInt */ /* -------- */ %fragment(SWIG_From_frag(Petsc64bitInt),"header", fragment=SWIG_From_frag(long long), fragment=SWIG_From_frag(long)) { SWIGINTERN SWIG_Object SWIG_From_dec(Petsc64bitInt)(Petsc64bitInt val) { %#if PETSC_SIZEOF_LONG == 8 return SWIG_From(long)(%numeric_cast(val,long)); %#else return SWIG_From(long long)(%numeric_cast(val,long long)); %#endif } } %fragment(SWIG_AsVal_frag(Petsc64bitInt),"header", fragment=SWIG_AsVal_frag(long long), fragment=SWIG_AsVal_frag(long)) { SWIGINTERN int SWIG_AsVal_dec(Petsc64bitInt)(SWIG_Object obj, Petsc64bitInt *val) { %#if PETSC_SIZEOF_LONG == 8 long v; int res = SWIG_AsVal(long)(obj, &v); %#else long long v; int res = SWIG_AsVal(long long)(obj, &v); %#endif if (SWIG_IsOK(res) && val) if (val) *val = %numeric_cast(v,Petsc64bitInt); return res; } } %fragment(SWIG_From_frag(PetscInt),"header", fragment=SWIG_From_frag(Petsc64bitInt), fragment=SWIG_From_frag(int)) { %#if defined(PETSC_USE_64BIT_INDICES) %define_as(SWIG_From(PetscInt), SWIG_From(Petsc64bitInt)) %#else %define_as(SWIG_From(PetscInt), SWIG_From(int)) %#endif } %fragment(SWIG_AsVal_frag(PetscInt),"header", fragment=SWIG_AsVal_frag(Petsc64bitInt), fragment=SWIG_AsVal_frag(int)) { %#if defined(PETSC_USE_64BIT_INDICES) %define_as(SWIG_AsVal(PetscInt), SWIG_AsVal(Petsc64bitInt)) %#else %define_as(SWIG_AsVal(PetscInt), SWIG_AsVal(int)) %#endif } /* PetscReal */ /* --------- */ %fragment(SWIG_From_frag(long double),"header", fragment=SWIG_From_frag(double)) { SWIGINTERN SWIG_Object SWIG_From_dec(long double)(long double val) { return SWIG_From(double)((double)val); } } %fragment(SWIG_AsVal_frag(long double),"header", fragment=SWIG_AsVal_frag(double)) { SWIGINTERN int SWIG_AsVal_dec(long double)(SWIG_Object obj, long double *val) { double v; int res = SWIG_AsVal(double)(obj, &v); if (SWIG_IsOK(res) && val) if (val) *val = %numeric_cast(v,long double); return res; } } %fragment(SWIG_From_frag(PetscReal),"header", fragment=SWIG_From_frag(long double), fragment=SWIG_From_frag(double), fragment=SWIG_From_frag(float)) { %#if defined(PETSC_USE_REAL_SINGLE) %define_as(SWIG_From(PetscReal), SWIG_From(float)) %#elif defined(PETSC_USE_REAL_DOUBLE) %define_as(SWIG_From(PetscReal), SWIG_From(double)) %#elif defined(PETSC_USE_REAL_LONG_DOUBLE) %define_as(SWIG_From(PetscReal), SWIG_From(long double)) %#endif } %fragment(SWIG_AsVal_frag(PetscReal),"header", fragment=SWIG_AsVal_frag(long double), fragment=SWIG_AsVal_frag(double), fragment=SWIG_AsVal_frag(float)) { %#if defined(PETSC_USE_REAL_SINGLE) %define_as(SWIG_AsVal(PetscReal), SWIG_AsVal(float)) %#elif defined(PETSC_USE_REAL_DOUBLE) %define_as(SWIG_AsVal(PetscReal), SWIG_AsVal(double)) %#elif defined(PETSC_USE_REAL_LONG_DOUBLE) %define_as(SWIG_AsVal(PetscReal), SWIG_AsVal(long double)) %#endif } /* PetscComplex */ /* ------------ */ %include complex.i %fragment(SWIG_From_frag(PetscComplex),"header", #ifdef __cplusplus fragment=SWIG_From_frag(std::complex), fragment=SWIG_From_frag(std::complex), fragment=SWIG_From_frag(std::complex)) #else fragment=SWIG_From_frag(long double complex), fragment=SWIG_From_frag(double complex), fragment=SWIG_From_frag(float complex)) #endif { %#if defined(PETSC_CLANGUAGE_CXX) %define_as(SWIG_From(PetscComplex), SWIG_From(std::complex)) %#else %define_as(SWIG_From(PetscComplex), SWIG_From(double complex)) %#endif } %fragment(SWIG_AsVal_frag(PetscComplex),"header", #ifdef __cplusplus fragment=SWIG_AsVal_frag(std::complex), fragment=SWIG_AsVal_frag(std::complex), fragment=SWIG_AsVal_frag(std::complex)) #else fragment=SWIG_AsVal_frag(long double complex), fragment=SWIG_AsVal_frag(double complex), fragment=SWIG_AsVal_frag(float complex)) #endif { %#if defined(PETSC_CLANGUAGE_CXX) %define_as(SWIG_AsVal(PetscComplex), SWIG_AsVal(std::complex)) %#else %define_as(SWIG_AsVal(PetscComplex), SWIG_AsVal(double complex)) %#endif } /* PetscScalar */ /* ----------- */ %fragment(SWIG_From_frag(PetscScalar), "header", fragment=SWIG_From_frag(PetscReal), fragment=SWIG_From_frag(PetscComplex)) { %#if defined(PETSC_USE_SCALAR_COMPLEX) %define_as(SWIG_From(PetscScalar), SWIG_From(PetscComplex)) %#elif defined(PETSC_USE_SCALAR_REAL) %define_as(SWIG_From(PetscScalar), SWIG_From(PetscReal)) %#endif } %fragment(SWIG_AsVal_frag(PetscScalar), "header", fragment=SWIG_AsVal_frag(PetscReal), fragment=SWIG_AsVal_frag(PetscComplex)) { %#if defined(PETSC_USE_SCALAR_COMPLEX) %define_as(SWIG_AsVal(PetscScalar), SWIG_AsVal(PetscComplex)) %#elif defined(PETSC_USE_SCALAR_REAL) %define_as(SWIG_AsVal(PetscScalar), SWIG_AsVal(PetscReal)) %#endif } %define %petsc4py_numt(Pkg, PyType, Type, CheckCode, UNUSED) %types(Type,Type*); %typemaps_primitive(%checkcode(CheckCode), Type); /* INPUT value typemap*/ %typemap(typecheck, precedence=%checkcode(CheckCode), fragment=SWIG_AsVal_frag(Type)) Type, const Type & { int res = SWIG_AsVal(Type)($input, 0); $1 = SWIG_CheckState(res); } %typemap(in,noblock=1,fragment=SWIG_AsVal_frag(Type)) Type (Type val, int ecode = 0) { ecode = SWIG_AsVal(Type)($input, &val); if (!SWIG_IsOK(ecode)) %argument_fail(ecode, "$ltype", $symname, $argnum); $1 = %static_cast(val,$ltype); } %typemap(in,noblock=1,fragment=SWIG_AsVal_frag(Type)) const Type & ($*ltype temp, Type val, int ecode = 0) { ecode = SWIG_AsVal(Type)($input, &val); if (!SWIG_IsOK(ecode)) %argument_fail(ecode, "$*ltype", $symname, $argnum); temp = %static_cast(val,$*ltype); $1 = &temp; } %typemap(freearg) Type, const Type & ""; /* INPUT pointer/reference typemap */ %typemap(typecheck, precedence=%checkcode(CheckCode), fragment=SWIG_AsVal_frag(Type)) Type *INPUT, Type &INPUT { int res = SWIG_AsVal(Type)($input, 0); $1 = SWIG_CheckState(res); } %typemap(in,noblock=1,fragment=SWIG_AsVal_frag(Type)) Type *INPUT ($*ltype temp, int res = 0) { res = SWIG_AsVal(Type)($input, &temp); if (!SWIG_IsOK(res)) %argument_fail(res, "$*ltype",$symname, $argnum); $1 = &temp; } %typemap(in,noblock=1,fragment=SWIG_AsVal_frag(Type)) Type &INPUT ($*ltype temp, int res = 0) { res = SWIG_AsVal(Type)($input, &temp); if (!SWIG_IsOK(res)) %argument_fail(res, "$*ltype",$symname, $argnum); $1 = &temp; } %typemap(freearg) Type *INPUT, Type &INPUT ""; /* OUTPUT pointer/reference typemap */ %typemap(in,numinputs=0,noblock=1) Type *OUTPUT ($*ltype temp=0) "$1 = &temp;"; %typemap(in,numinputs=0,noblock=1) Type &OUTPUT ($*ltype temp=0) "$1 = &temp;"; %typemap(argout,noblock=1,fragment=SWIG_From_frag(Type)) Type* OUTPUT, Type &OUTPUT { %append_output(SWIG_From(Type)((*$1))); } %typemap(freearg) Type *OUTPUT ""; /* INOUT pointer/reference typemap */ %typemap(typecheck) Type *INOUT = Type *INPUT; %typemap(in) Type *INOUT = Type *INPUT; %typemap(argout) Type *INOUT = Type *OUTPUT; %typemap(freearg) Type *INOUT ""; %typemap(typecheck) Type &INOUT = Type &INPUT; %typemap(in) Type &INOUT = Type &INPUT; %typemap(argout) Type &INOUT = Type &OUTPUT; %typemap(freearg) Type &INOUT ""; /* default typemap for pointer argument */ %apply Type *OUTPUT { Type * } %enddef /* %petsc4py_numt */ /* ---------------------------------------------------------------- */ /* ---------------------------------------------------------------- */ /* Enumerations */ /* ---------------------------------------------------------------- */ %define SWIG_TYPECHECK_PETSC_ENUM SWIG_TYPECHECK_INT32 %enddef %fragment(SWIG_From_frag(PetscEnum),"header", fragment=SWIG_From_frag(int)) { SWIGINTERN SWIG_Object SWIG_From_dec(PetscEnum)(PetscEnum val) { return SWIG_From(int)((PetscEnum)val); } } %fragment(SWIG_AsVal_frag(PetscEnum),"header", fragment=SWIG_AsVal_frag(int)) { SWIGINTERN int SWIG_AsVal_dec(PetscEnum)(SWIG_Object obj, PetscEnum *val) { int v; int res = SWIG_AsVal(int)(obj, &v); if (SWIG_IsOK(res) && val) *val = %static_cast(v,PetscEnum); return res; } } %typemaps_primitive(%checkcode(PETSC_ENUM), PetscEnum); %typemap(in,numinputs=0) PetscEnum *OUTPUT ($*ltype temp) "$1 = &temp;" %typemap(argout,noblock=1,fragment=SWIG_From_frag(PetscEnum)) PetscEnum *OUTPUT { %append_output(SWIG_From(PetscEnum)(%static_cast(*$1,PetscEnum))); } %apply PetscEnum *INPUT { PetscEnum const * } %typemap(argout) PetscEnum const* ""; %apply PetscEnum *OUTPUT { PetscEnum * } %define %petsc4py_enum(EnumType) %apply PetscEnum { EnumType } %apply PetscEnum * { EnumType * } %apply PetscEnum *INPUT { EnumType *INPUT } %apply PetscEnum *OUTPUT { EnumType *OUTPUT } %apply PetscEnum *INOUT { EnumType *INOUT } %enddef /* ---------------------------------------------------------------- */ %define %petsc4py_fragments(Pkg, PyType, Type, OBJECT_DEFAULT) /* AsVal */ /* ----- */ %fragment(SWIG_AsVal_frag(Type),"header") { SWIGINTERN int SWIG_AsVal_dec(Type)(SWIG_Object input, Type *v) { if (input == Py_None) { if (v) *v = OBJECT_DEFAULT; return SWIG_OK; } else if (PyObject_TypeCheck(input,&Py##Pkg##PyType##_Type)) { if (v) *v = Py##Pkg##PyType##_Get(input); return SWIG_OK; } else { void *argp = 0; int res = SWIG_ConvertPtr(input,&argp,%descriptor(p_##Type), 0); if (!SWIG_IsOK(res)) return res; if (!argp) return SWIG_ValueError; if (v) *v = *(%static_cast(argp,Type*)); return SWIG_OK; } } } /* AsPtr */ /* ----- */ %fragment(SWIG_AsPtr_frag(Type),"header", fragment=%fragment_name(GetPtr,Type)) { SWIGINTERN int SWIG_AsPtr_dec(Type)(SWIG_Object input, Type **p) { if (input == Py_None) { if (p) *p = 0; return SWIG_OK; } else if (PyObject_TypeCheck(input,&Py##Pkg##PyType##_Type)) { if (p) *p = Py##Pkg##PyType##_GetPtr(input); return SWIG_OK; } else { void *argp = 0; int res = SWIG_ConvertPtr(input,&argp,%descriptor(p_##Type), 0); if (!SWIG_IsOK(res)) return res; if (!argp) return SWIG_ValueError; if (p) *p = %static_cast(argp,Type*); return SWIG_OK; } } } /* From */ /* ---- */ %fragment(SWIG_From_frag(Type),"header") { SWIGINTERN SWIG_Object SWIG_From_dec(Type)(Type v) { return Py##Pkg##PyType##_New(v); } } %enddef /*petsc4py_fragments*/ /* ---------------------------------------------------------------- */ /* MPI Communicator */ /* ---------------------------------------------------------------- */ %define SWIG_TYPECHECK_MPI_COMM 600 %enddef %define %petsc4py_comm(Pkg, PyType, Type, CODE, OBJECT_NULL) /* pointer type */ %types(Type*); /* XXX find better way */ /* fragments */ %fragment(%fragment_name(GetPtr,MPI_Comm),"header") { } %petsc4py_fragments(Pkg, PyType, Type, PETSC_COMM_WORLD) /* base typemaps */ %typemaps_asvalfromn(%checkcode(MPI_COMM), Type); /* custom typemaps */ %typemap(check,noblock=1) Type { if ($1 == OBJECT_NULL) %argument_nullref("$ltype",$symname,$argnum); } %enddef /* %petsc4py_comm */ /* ---------------------------------------------------------------- */ /* PETSc Objects */ /* ---------------------------------------------------------------- */ %define SWIG_TYPECHECK_PETSC_OBJECT 500 %enddef %define SWIG_TYPECHECK_PETSC_VIEWER 501 %enddef %define SWIG_TYPECHECK_PETSC_RANDOM 502 %enddef %define SWIG_TYPECHECK_PETSC_IS 510 %enddef %define SWIG_TYPECHECK_PETSC_IS_LTOGM 511 %enddef %define SWIG_TYPECHECK_PETSC_SF 512 %enddef %define SWIG_TYPECHECK_PETSC_VEC 513 %enddef %define SWIG_TYPECHECK_PETSC_VEC_SCATTER 514 %enddef %define SWIG_TYPECHECK_PETSC_SECTION 515 %enddef %define SWIG_TYPECHECK_PETSC_MAT 520 %enddef %define SWIG_TYPECHECK_PETSC_MAT_NULLSPACE 521 %enddef %define SWIG_TYPECHECK_PETSC_KSP 530 %enddef %define SWIG_TYPECHECK_PETSC_PC 531 %enddef %define SWIG_TYPECHECK_PETSC_SNES 532 %enddef %define SWIG_TYPECHECK_PETSC_TS 533 %enddef %define SWIG_TYPECHECK_PETSC_TAO 534 %enddef %define SWIG_TYPECHECK_PETSC_AO 540 %enddef %define SWIG_TYPECHECK_PETSC_DM 541 %enddef %define SWIG_TYPECHECK_PETSC_PARTITIONER 542 %enddef %define %petsc4py_objt(Pkg, PyType, Type, CODE) /* pointer type */ %types(Type*); /* XXX find better way */ /* fragments */ %fragment(%fragment_name(GetPtr,Type),"header") { /* XXX implement this better*/ %define_as(Py##Pkg##PyType##_GetPtr(ob), (Type *)PyPetscObject_GetPtr(ob)) } %petsc4py_fragments(Pkg, PyType, Type, NULL) /* base typemaps */ %typemaps_asptrfromn(%checkcode(CODE), Type); /* Custom Typemaps */ /* --------------- */ /* freearg */ %typemap(freearg) Type, Type*, Type& ""; /* check */ %typemap(check,noblock=1) Type INPUT { if ($1 == NULL) %argument_nullref("$type", $symname, $argnum); } /* input pointer */ %typemap(in,fragment=SWIG_AsPtr_frag(Type)) Type *INPUT (int res = SWIG_OLDOBJ) { Type *ptr = (Type *)0; res = SWIG_AsPtr(Type)($input, &ptr); if (!SWIG_IsOK(res)) { %argument_fail(res,"$type", $symname, $argnum); } $1 = ptr; } %typemap(check,noblock=1) Type *INPUT { if ($1 == NULL || (*$1) == NULL) %argument_nullref("$type", $symname, $argnum); } /* input reference */ %apply Type *INPUT { Type& } /* optional value */ %typemap(arginit) Type OPTIONAL "$1 = NULL;" %typemap(in,fragment=SWIG_AsPtr_frag(Type)) Type OPTIONAL (int res = 0) { Type *ptr = (Type *)0; res = SWIG_AsPtr(Type)($input, &ptr); if (!SWIG_IsOK(res)) { %argument_fail(res, "$type", $symname, $argnum); } if (ptr) $1 = *ptr; } /* optional reference */ %typemap(in,fragment=SWIG_AsPtr_frag(Type)) Type& OPTIONAL (int res = 0) { Type *ptr = (Type *)0; res = SWIG_AsPtr(Type)($input, &ptr); if (!SWIG_IsOK(res)) { %argument_fail(res, "$type", $symname, $argnum); } if (!ptr) %argument_nullref("$type", $symname, $argnum); $1 = ptr; if (SWIG_IsNewObj(res)) %delete(ptr); } %typemap(in,numinputs=0) Type* OUTREF, Type* OUTNEW ($*ltype temp = NULL) "$1 = &temp;"; %typemap(freearg) Type* OUTREF, Type* OUTNEW ""; %typemap(check) Type* OUTREF, Type* OUTNEW ""; %typemap(argout) Type* OUTREF { SWIG_Object o = Py##Pkg##PyType##_New(*$1); %append_output(o); } %typemap(argout) Type* OUTNEW { SWIG_Object o = Py##Pkg##PyType##_New(*$1); if (o!=NULL) PetscObjectDereference((PetscObject)(*$1)); %append_output(o); } %apply Type OPTIONAL { Type MAYBE } %apply Type& OPTIONAL { Type& MAYBE } %apply Type* OUTNEW { Type* NEWOBJ } %apply Type* OUTREF { Type* NEWREF } %enddef /* %petsc4py_objt */ /* ---------------------------------------------------------------- */ /* */ /* ---------------------------------------------------------------- */ %petsc4py_errt( Petsc, Error , PetscErrorCode ) %petsc4py_numt( Petsc , Int , PetscInt , PETSC_INT , 0 ) %petsc4py_numt( Petsc , Real , PetscReal , PETSC_REAL , 0 ) %petsc4py_numt( Petsc , Complex , PetscComplex , PETSC_COMPLEX , 0 ) %petsc4py_numt( Petsc , Scalar , PetscScalar , PETSC_SCALAR , 0 ) %petsc4py_comm( Petsc, Comm , MPI_Comm , MPI_COMM , MPI_COMM_NULL ) %petsc4py_objt( Petsc , Object , PetscObject , PETSC_OBJECT ) %petsc4py_objt( Petsc , Viewer , PetscViewer , PETSC_VIEWER ) %petsc4py_objt( Petsc , Random , PetscRandom , PETSC_RANDOM ) %petsc4py_objt( Petsc , IS , IS , PETSC_IS ) %petsc4py_objt( Petsc , LGMap , ISLocalToGlobalMapping , PETSC_IS_LTOGM ) %petsc4py_objt( Petsc , SF , SF , PETSC_SF ) %petsc4py_objt( Petsc , Vec , Vec , PETSC_VEC ) %petsc4py_objt( Petsc , Scatter , VecScatter , PETSC_VEC_SCATTER ) %petsc4py_objt( Petsc , Section , PetscSection , PETSC_SECTION ) %petsc4py_objt( Petsc , Mat , Mat , PETSC_MAT ) %petsc4py_objt( Petsc , NullSpace , MatNullSpace , PETSC_MAT_NULLSPACE ) %petsc4py_objt( Petsc , KSP , KSP , PETSC_KSP ) %petsc4py_objt( Petsc , PC , PC , PETSC_PC ) %petsc4py_objt( Petsc , SNES , SNES , PETSC_SNES ) %petsc4py_objt( Petsc , TS , TS , PETSC_TS ) %petsc4py_objt( Petsc , TAO , Tao , PETSC_TAO ) %petsc4py_objt( Petsc , AO , AO , PETSC_AO ) %petsc4py_objt( Petsc , DM , DM , PETSC_DM ) %petsc4py_objt( Petsc , Partitioner , PetscPartitioner , PETSC_PARTITIONER ) /* ---------------------------------------------------------------- */ /* * Local Variables: * mode: C * End: */ petsc4py-3.7.0/src/include/compat/0000755000175000001440000000000012711405164017557 5ustar dalcinlusers00000000000000petsc4py-3.7.0/src/include/compat/hypre.h0000644000175000001440000000277012711377604021074 0ustar dalcinlusers00000000000000#ifndef PETSC4PY_COMPAT_HYPRE_H #define PETSC4PY_COMPAT_HYPRE_H #if !defined(PETSC_HAVE_HYPRE) #define PetscPCHYPREError do { \ PetscFunctionBegin; \ SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,__FUNCT__"() requires HYPRE"); \ PetscFunctionReturn(PETSC_ERR_SUP);} while (0) #undef __FUNCT__ #define __FUNCT__ "PCHYPREGetType" PetscErrorCode PCHYPREGetType(PETSC_UNUSED PC pc,PETSC_UNUSED const char *name[]){PetscPCHYPREError;} #undef __FUNCT__ #define __FUNCT__ "PCHYPRESetType" PetscErrorCode PCHYPRESetType(PETSC_UNUSED PC pc,PETSC_UNUSED const char name[]){PetscPCHYPREError;} #undef __FUNCT__ #define __FUNCT__ "PCHYPRESetDiscreteCurl" PetscErrorCode PCHYPRESetDiscreteCurl(PETSC_UNUSED PC pc,PETSC_UNUSED Mat C){PetscPCHYPREError;} #undef __FUNCT__ #define __FUNCT__ "PCHYPRESetDiscreteGradient" PetscErrorCode PCHYPRESetDiscreteGradient(PETSC_UNUSED PC pc,PETSC_UNUSED Mat G){PetscPCHYPREError;} #undef __FUNCT__ #define __FUNCT__ "PCHYPRESetAlphaPoissonMatrix" PetscErrorCode PCHYPRESetAlphaPoissonMatrix(PETSC_UNUSED PC pc,PETSC_UNUSED Mat A){PetscPCHYPREError;} #undef __FUNCT__ #define __FUNCT__ "PCHYPRESetBetaPoissonMatrix" PetscErrorCode PCHYPRESetBetaPoissonMatrix(PETSC_UNUSED PC pc,PETSC_UNUSED Mat B){PetscPCHYPREError;} #undef __FUNCT__ #define __FUNCT__ "PCHYPRESetEdgeConstantVectors" PetscErrorCode PCHYPRESetEdgeConstantVectors(PETSC_UNUSED PC pc,PETSC_UNUSED Vec ozz,PETSC_UNUSED Vec zoz,PETSC_UNUSED Vec zzo){PetscPCHYPREError;} #undef PetscPCHYPREError #endif #endif/*PETSC4PY_COMPAT_HYPRE_H*/ petsc4py-3.7.0/src/include/compat/mumps.h0000644000175000001440000000341012711377604021076 0ustar dalcinlusers00000000000000#ifndef PETSC4PY_COMPAT_MUMPS_H #define PETSC4PY_COMPAT_MUMPS_H #include #if !defined(PETSC_HAVE_MUMPS) #define PetscMUMPSError do { \ PetscFunctionBegin; \ SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,__FUNCT__"() requires MUMPS"); \ PetscFunctionReturn(PETSC_ERR_SUP);} while (0) #undef __FUNCT__ #define __FUNCT__ "MatMumpsSetIcntl" PetscErrorCode MatMumpsSetIcntl(PETSC_UNUSED Mat F,PETSC_UNUSED PetscInt icntl,PETSC_UNUSED PetscInt ival){PetscMUMPSError;} #undef __FUNCT__ #define __FUNCT__ "MatMumpsGetIcntl" PetscErrorCode MatMumpsGetIcntl(PETSC_UNUSED Mat F,PETSC_UNUSED PetscInt icntl,PETSC_UNUSED PetscInt *ival){PetscMUMPSError;} #undef __FUNCT__ #define __FUNCT__ "MatMumpsSetCntl" PetscErrorCode MatMumpsSetCntl(PETSC_UNUSED Mat F,PETSC_UNUSED PetscInt icntl,PETSC_UNUSED PetscReal val){PetscMUMPSError;} #undef __FUNCT__ #define __FUNCT__ "MatMumpsGetCntl" PetscErrorCode MatMumpsGetCntl(PETSC_UNUSED Mat F,PETSC_UNUSED PetscInt icntl,PETSC_UNUSED PetscReal *val){PetscMUMPSError;} #undef __FUNCT__ #define __FUNCT__ "MatMumpsGetInfo" PetscErrorCode MatMumpsGetInfo(PETSC_UNUSED Mat F,PETSC_UNUSED PetscInt icntl,PETSC_UNUSED PetscInt *ival){PetscMUMPSError;} #undef __FUNCT__ #define __FUNCT__ "MatMumpsGetInfog" PetscErrorCode MatMumpsGetInfog(PETSC_UNUSED Mat F,PETSC_UNUSED PetscInt icntl,PETSC_UNUSED PetscInt *ival){PetscMUMPSError;} #undef __FUNCT__ #define __FUNCT__ "MatMumpsGetRinfo" PetscErrorCode MatMumpsGetRinfo(PETSC_UNUSED Mat F,PETSC_UNUSED PetscInt icntl,PETSC_UNUSED PetscReal *val){PetscMUMPSError;} #undef __FUNCT__ #define __FUNCT__ "MatMumpsGetRinfog" PetscErrorCode MatMumpsGetRinfog(PETSC_UNUSED Mat F,PETSC_UNUSED PetscInt icntl,PETSC_UNUSED PetscReal *val){PetscMUMPSError;} #undef PetscMUMPSError #endif #endif/*PETSC4PY_COMPAT_MUMPS_H*/ petsc4py-3.7.0/src/include/compat/hdf5.h0000644000175000001440000000262512711377604020572 0ustar dalcinlusers00000000000000#ifndef PETSC4PY_COMPAT_HDF5_H #define PETSC4PY_COMPAT_HDF5_H #include #if !defined(PETSC_HAVE_HDF5) #define PetscViewerHDF5Error do { \ PetscFunctionBegin; \ SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,__FUNCT__"() requires HDF5"); \ PetscFunctionReturn(PETSC_ERR_SUP);} while (0) #undef __FUNCT__ #define __FUNCT__ "PetscViewerHDF5PushGroup" PetscErrorCode PetscViewerHDF5PushGroup(PETSC_UNUSED PetscViewer vw,PETSC_UNUSED const char g[]){PetscViewerHDF5Error;} #undef __FUNCT__ #define __FUNCT__ "PetscViewerHDF5PopGroup" PetscErrorCode PetscViewerHDF5PopGroup(PETSC_UNUSED PetscViewer vw){PetscViewerHDF5Error;} #undef __FUNCT__ #define __FUNCT__ "PetscViewerHDF5GetGroup" PetscErrorCode PetscViewerHDF5GetGroup(PETSC_UNUSED PetscViewer vw,PETSC_UNUSED const char *g[]){PetscViewerHDF5Error;} #undef __FUNCT__ #define __FUNCT__ "PetscViewerHDF5SetTimestep" PetscErrorCode PetscViewerHDF5SetTimestep(PETSC_UNUSED PetscViewer vw, PETSC_UNUSED PetscInt n){PetscViewerHDF5Error;} #undef __FUNCT__ #define __FUNCT__ "PetscViewerHDF5GetTimestep" PetscErrorCode PetscViewerHDF5GetTimestep(PETSC_UNUSED PetscViewer vw, PETSC_UNUSED PetscInt*n){PetscViewerHDF5Error;} #undef __FUNCT__ #define __FUNCT__ "PetscViewerHDF5IncrementTimestep" PetscErrorCode PetscViewerHDF5IncrementTimestep(PETSC_UNUSED PetscViewer vw){PetscViewerHDF5Error;} #undef PetscViewerHDF5Error #endif #endif/*PETSC4PY_COMPAT_HDF5_H*/ petsc4py-3.7.0/src/include/compat/tao.h0000644000175000001440000000144112711377604020522 0ustar dalcinlusers00000000000000#ifndef PETSC4PY_COMPAT_TAO_H #define PETSC4PY_COMPAT_TAO_H #if defined(PETSC_USE_COMPLEX) #define PetscTaoError do { \ PetscFunctionBegin; \ SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,__FUNCT__"() not supported with complex scalars"); \ PetscFunctionReturn(PETSC_ERR_SUP);} while (0) #undef __FUNCT__ #define __FUNCT__ "TaoLMVMSetH0" PetscErrorCode TaoLMVMSetH0(PETSC_UNUSED Tao tao,PETSC_UNUSED Mat mat) {PetscTaoError;} #undef __FUNCT__ #define __FUNCT__ "TaoLMVMGetH0" PetscErrorCode TaoLMVMGetH0(PETSC_UNUSED Tao tao,PETSC_UNUSED Mat *mat) {PetscTaoError;} #undef __FUNCT__ #define __FUNCT__ "TaoLMVMGetH0KSP" PetscErrorCode TaoLMVMGetH0KSP(PETSC_UNUSED Tao tao,PETSC_UNUSED KSP *ksp) {PetscTaoError;} #undef PetscTaoError #endif/*PETSC_USE_COMPLEX*/ #endif/*PETSC4PY_COMPAT_TAO_H*/ petsc4py-3.7.0/src/include/compat/mpi.h0000644000175000001440000000667612711377604020543 0ustar dalcinlusers00000000000000#ifndef PETSC4PY_COMPAT_MPI_H #define PETSC4PY_COMPAT_MPI_H #if defined(OPEN_MPI) #ifndef OPENMPI_DLOPEN_LIBMPI #define OPENMPI_DLOPEN_LIBMPI 1 #endif #if OPENMPI_DLOPEN_LIBMPI #if HAVE_DLOPEN #if HAVE_DLFCN_H #include #else #if defined(__linux__) #define RTLD_LAZY 0x00001 #define RTLD_NOW 0x00002 #define RTLD_LOCAL 0x00000 #define RTLD_GLOBAL 0x00100 #define RTLD_NOLOAD 0x00004 #define RTLD_NODELETE 0x01000 #define RTLD_DEEPBIND 0x00008 #elif defined(__APPLE__) #define RTLD_LAZY 0x1 #define RTLD_NOW 0x2 #define RTLD_LOCAL 0x4 #define RTLD_GLOBAL 0x8 #define RTLD_NOLOAD 0x10 #define RTLD_NODELETE 0x80 #define RTLD_FIRST 0x100 #elif defined(__CYGWIN__) #define RTLD_LAZY 1 #define RTLD_NOW 2 #define RTLD_LOCAL 0 #define RTLD_GLOBAL 4 #endif #if defined(__cplusplus) || defined(c_plusplus) extern "C" { #endif extern void *dlopen(const char *, int); extern void *dlsym(void *, const char *); extern int dlclose(void *); extern char *dlerror(void); #if defined(__cplusplus) || defined(c_plusplus) } #endif #endif #ifndef RTLD_LAZY #define RTLD_LAZY 1 #endif #ifndef RTLD_NOW #define RTLD_NOW RTLD_LAZY #endif #ifndef RTLD_LOCAL #define RTLD_LOCAL 0 #endif #ifndef RTLD_GLOBAL #define RTLD_GLOBAL RTLD_LOCAL #endif /* static void * my_dlopen(const char *name, int mode) { void *handle; static int called = 0; if (!called) { called = 1; #if HAVE_DLFCN_H printf("HAVE_DLFCN_H: yes\n"); #else printf("HAVE_DLFCN_H: no\n"); #endif printf("\n"); printf("RTLD_LAZY: 0x%X\n", RTLD_LAZY ); printf("RTLD_NOW: 0x%X\n", RTLD_NOW ); printf("RTLD_LOCAL: 0x%X\n", RTLD_LOCAL ); printf("RTLD_GLOBAL: 0x%X\n", RTLD_GLOBAL ); #ifdef RTLD_NOLOAD printf("RTLD_NOLOAD: 0x%X\n", RTLD_NOLOAD ); #endif printf("\n"); } handle = dlopen(name, mode); printf("dlopen(\"%s\",0x%X) -> %p\n", name, mode, handle); printf("dlerror() -> %s\n\n", dlerror()); return handle; } #define dlopen my_dlopen */ static void OPENMPI_dlopen_libmpi(void) { void *handle = 0; int mode = RTLD_NOW | RTLD_GLOBAL; #ifdef RTLD_NOLOAD mode |= RTLD_NOLOAD; #endif #if defined(__CYGWIN__) if (!handle) handle = dlopen("cygmpi.dll", mode); if (!handle) handle = dlopen("mpi.dll", mode); #elif defined(__APPLE__) /* Mac OS X */ if (!handle) handle = dlopen("libmpi.3.dylib", mode); if (!handle) handle = dlopen("libmpi.2.dylib", mode); if (!handle) handle = dlopen("libmpi.1.dylib", mode); if (!handle) handle = dlopen("libmpi.0.dylib", mode); if (!handle) handle = dlopen("libmpi.dylib", mode); #else /* GNU/Linux and others */ if (!handle) handle = dlopen("libmpi.so.3", mode); if (!handle) handle = dlopen("libmpi.so.2", mode); if (!handle) handle = dlopen("libmpi.so.1", mode); if (!handle) handle = dlopen("libmpi.so.0", mode); if (!handle) handle = dlopen("libmpi.so", mode); #endif } static PetscErrorCode PetscInitialize_OpenMPI(int *argc,char ***args, const char file[], const char help[]) { OPENMPI_dlopen_libmpi(); return PetscInitialize(argc,args,file,help); } #undef PetscInitialize #define PetscInitialize PetscInitialize_OpenMPI #endif /* HAVE_DLOPEN */ #endif /* OPENMPI_DLOPEN_LIBMPI */ #endif /* OPEN_MPI */ #endif/*PETSC4PY_COMPAT_MPI_H*/ petsc4py-3.7.0/src/include/cython.h0000644000175000001440000000321012711377604017754 0ustar dalcinlusers00000000000000static void *Cython_ImportFunction(PyObject *module, const char *funcname, const char *signature) { PyObject *capi = NULL, *capsule = NULL; void *p = NULL; capi = PyObject_GetAttrString(module, (char *)"__pyx_capi__"); if (!capi) goto bad; capsule = PyDict_GetItemString(capi, (char *)funcname); if (!capsule) { PyErr_Format(PyExc_ImportError, "%s does not export expected C function %s", PyModule_GetName(module), funcname); goto bad; } #if PY_VERSION_HEX < 0x03020000 if (PyCObject_Check(capsule)) { const char *desc, *s1, *s2; desc = (const char *)PyCObject_GetDesc(capsule); if (!desc) goto bad; s1 = desc; s2 = signature; while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; } if (*s1 != *s2) { PyErr_Format(PyExc_TypeError, "C function %s.%s has wrong signature " "(expected %s, got %s)", PyModule_GetName(module), funcname, signature, desc); goto bad; } p = PyCObject_AsVoidPtr(capsule); } #endif #if PY_VERSION_HEX >= 0x02070000 if (PyCapsule_CheckExact(capsule)) { if (!PyCapsule_IsValid(capsule, signature)) { const char *desc = PyCapsule_GetName(capsule); PyErr_Format(PyExc_TypeError, "C function %s.%s has wrong signature " "(expected %s, got %s)", PyModule_GetName(module), funcname, signature, desc); goto bad; } p = PyCapsule_GetPointer(capsule, signature); } #endif Py_DECREF(capi); return p; bad: Py_XDECREF(capi); return NULL; } petsc4py-3.7.0/src/include/initpkg.h0000644000175000001440000000227412711377604020126 0ustar dalcinlusers00000000000000/* ------------------------------------------------------------------------- */ #undef __FUNCT__ #define __FUNCT__ "PetscInitializePackageAll" static PetscErrorCode PetscInitializePackageAll(void) { PetscErrorCode ierr; PetscFunctionBegin; ierr = PetscSysInitializePackage();CHKERRQ(ierr); ierr = PetscViewerInitializePackage();CHKERRQ(ierr); ierr = PetscRandomInitializePackage();CHKERRQ(ierr); ierr = ISInitializePackage();CHKERRQ(ierr); ierr = VecInitializePackage();CHKERRQ(ierr); ierr = PFInitializePackage();CHKERRQ(ierr); ierr = MatInitializePackage();CHKERRQ(ierr); ierr = PCInitializePackage();CHKERRQ(ierr); ierr = KSPInitializePackage();CHKERRQ(ierr); ierr = SNESInitializePackage();CHKERRQ(ierr); ierr = TSInitializePackage();CHKERRQ(ierr); ierr = TaoInitializePackage();CHKERRQ(ierr); ierr = AOInitializePackage();CHKERRQ(ierr); ierr = DMInitializePackage();CHKERRQ(ierr); ierr = PetscSFInitializePackage();CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "" /* ------------------------------------------------------------------------- */ /* Local variables: c-basic-offset: 2 indent-tabs-mode: nil End: */ petsc4py-3.7.0/src/include/custom.h0000644000175000001440000004476512711377604020006 0ustar dalcinlusers00000000000000#ifndef PETSC4PY_CUSTOM_H #define PETSC4PY_CUSTOM_H #undef __FUNCT__ #define __FUNCT__ "" #include "petsc/private/vecimpl.h" #include "petsc/private/matimpl.h" #include "petsc/private/kspimpl.h" #include "petsc/private/pcimpl.h" #include "petsc/private/snesimpl.h" #include "petsc/private/tsimpl.h" #include "petsc/private/taoimpl.h" #include "petsc/private/sfimpl.h" /* ---------------------------------------------------------------- */ #ifndef PETSC_ERR_PYTHON #define PETSC_ERR_PYTHON ((PetscErrorCode)(-1)) #endif /* ---------------------------------------------------------------- */ typedef PetscErrorCode (*PetscErrorHandlerFunction) (MPI_Comm,int,const char*,const char*, PetscErrorCode,PetscErrorType,const char*,void*); #define PetscTBEH PetscTraceBackErrorHandler /* ---------------------------------------------------------------- */ #define PetscCLASSID(stageLog,index) \ ((stageLog)->classLog->classInfo[(index)].classid) #undef __FUNCT__ #define __FUNCT__ "PetscLogStageFindId" static PetscErrorCode PetscLogStageFindId(const char name[], PetscLogStage *stageid) { int s; PetscStageLog stageLog = 0; PetscBool match = PETSC_FALSE; PetscErrorCode ierr; PetscFunctionBegin; PetscValidCharPointer(name,1); PetscValidIntPointer(stageid,2); *stageid = -1; if (!(stageLog=petsc_stageLog)) PetscFunctionReturn(0); /* logging is off ? */ for(s = 0; s < stageLog->numStages; s++) { const char *sname = stageLog->stageInfo[s].name; ierr = PetscStrcasecmp(sname, name, &match);CHKERRQ(ierr); if (match) { *stageid = s; break; } } PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "PetscLogClassFindId" static PetscErrorCode PetscLogClassFindId(const char name[], PetscClassId *classid) { int c; PetscStageLog stageLog = 0; PetscBool match = PETSC_FALSE; PetscErrorCode ierr; PetscFunctionBegin; PetscValidCharPointer(name,1); PetscValidIntPointer(classid,2); *classid = -1; if (!(stageLog=petsc_stageLog)) PetscFunctionReturn(0); /* logging is off ? */ for(c = 0; c < stageLog->classLog->numClasses; c++) { const char *cname = stageLog->classLog->classInfo[c].name; PetscClassId id = PetscCLASSID(stageLog,c); ierr = PetscStrcasecmp(cname, name, &match);CHKERRQ(ierr); if (match) { *classid = id; break; } } PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "PetscLogEventFindId" static PetscErrorCode PetscLogEventFindId(const char name[], PetscLogEvent *eventid) { int e; PetscStageLog stageLog = 0; PetscBool match = PETSC_FALSE; PetscErrorCode ierr; PetscFunctionBegin; PetscValidCharPointer(name,1); PetscValidIntPointer(eventid,2); *eventid = -1; if (!(stageLog=petsc_stageLog)) PetscFunctionReturn(0); /* logging is off ? */ for(e = 0; e < stageLog->eventLog->numEvents; e++) { const char *ename = stageLog->eventLog->eventInfo[e].name; ierr = PetscStrcasecmp(ename, name, &match);CHKERRQ(ierr); if (match) { *eventid = e; break; } } PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "PetscLogStageFindName" static PetscErrorCode PetscLogStageFindName(PetscLogStage stageid, const char *name[]) { PetscStageLog stageLog = 0; PetscFunctionBegin; PetscValidPointer(name,3); *name = 0; if (!(stageLog=petsc_stageLog)) PetscFunctionReturn(0); /* logging is off ? */ if (stageid >=0 && stageid < stageLog->numStages) { *name = stageLog->stageInfo[stageid].name; } PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "PetscLogClassFindName" static PetscErrorCode PetscLogClassFindName(PetscClassId classid, const char *name[]) { int c; PetscStageLog stageLog = 0; PetscFunctionBegin; PetscValidPointer(name,3); *name = 0; if (!(stageLog=petsc_stageLog)) PetscFunctionReturn(0); /* logging is off ? */ for(c = 0; c < stageLog->classLog->numClasses; c++) { if (classid == PetscCLASSID(stageLog,c)) { *name = stageLog->classLog->classInfo[c].name; break; } } PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "PetscLogEventFindName" static PetscErrorCode PetscLogEventFindName(PetscLogEvent eventid, const char *name[]) { PetscStageLog stageLog = 0; PetscFunctionBegin; PetscValidPointer(name,3); *name = 0; if (!(stageLog=petsc_stageLog)) PetscFunctionReturn(0); /* logging is off ? */ if (eventid >=0 && eventid < stageLog->eventLog->numEvents) { *name = stageLog->eventLog->eventInfo[eventid].name; } PetscFunctionReturn(0); } /* ---------------------------------------------------------------- */ #if !defined(PETSC_HAVE_CUSP) #undef __FUNCT__ #define __FUNCT__ "VecCUSPGetCUDAArray" PETSC_STATIC_INLINE PetscErrorCode VecCUSPGetCUDAArray(Vec v,PetscScalar **a) { PetscFunctionBegin; PetscValidHeaderSpecific(v,VEC_CLASSID,1); PetscValidType(v,1); PetscValidPointer(a,2); SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,__FUNCT__"() requires CUSP"); PetscFunctionReturn(PETSC_ERR_SUP); } #define VecCUSPGetCUDAArrayRead VecCUSPGetCUDAArray #define VecCUSPGetCUDAArrayWrite VecCUSPGetCUDAArray #define VecCUSPGetCUDAArrayReadWrite VecCUSPGetCUDAArray #undef __FUNCT__ #define __FUNCT__ "VecCUSPRestoreCUDAArray" PETSC_STATIC_INLINE PetscErrorCode VecCUSPRestoreCUDAArray(Vec v,PetscScalar **a) { PetscFunctionBegin; PetscValidHeaderSpecific(v,VEC_CLASSID,1); PetscValidType(v,1); PetscValidPointer(a,2); SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,__FUNCT__"() requires CUSP"); PetscFunctionReturn(PETSC_ERR_SUP); } #define VecCUSPRestoreCUDAArrayRead VecCUSPRestoreCUDAArray #define VecCUSPRestoreCUDAArrayWrite VecCUSPRestoreCUDAArray #define VecCUSPRestoreCUDAArrayReadWrite VecCUSPRestoreCUDAArray #endif #undef __FUNCT__ #define __FUNCT__ "VecStrideSum" PETSC_STATIC_INLINE PetscErrorCode VecStrideSum(Vec v, PetscInt start, PetscScalar *a) { PetscInt i,n,bs; const PetscScalar *x; PetscScalar sum; MPI_Comm comm; PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(v,VEC_CLASSID,1); PetscValidType(v,1); PetscValidScalarPointer(a,2); ierr = VecGetBlockSize(v,&bs);CHKERRQ(ierr); if (start < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE, "Negative start %D",start); if (start >= bs) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG, "Start of stride subvector (%D) is too large " "for block size (%D)",start,bs); ierr = VecGetLocalSize(v,&n);CHKERRQ(ierr); ierr = VecGetArrayRead(v,&x);CHKERRQ(ierr); sum = (PetscScalar)0.0; for (i=start; ipreallocated; PetscFunctionReturn(0); } PETSC_STATIC_INLINE #undef __FUNCT__ #define __FUNCT__ "MatHasPreallocationAIJ" PetscErrorCode MatHasPreallocationAIJ(Mat A,PetscBool *aij,PetscBool *baij,PetscBool *sbaij) { void (*f)(void) = 0; PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(A,MAT_CLASSID,1); PetscValidType(A,1); PetscValidPointer(aij,2); PetscValidPointer(baij,3); PetscValidPointer(sbaij,4); *aij = *baij = *sbaij = PETSC_FALSE; if (!f) {ierr = PetscObjectQueryFunction((PetscObject)A,"MatMPIAIJSetPreallocation_C",&f);CHKERRQ(ierr);} if (!f) {ierr = PetscObjectQueryFunction((PetscObject)A,"MatSeqAIJSetPreallocation_C",&f);CHKERRQ(ierr);} if ( f) {*aij = PETSC_TRUE; goto done;}; if (!f) {ierr = PetscObjectQueryFunction((PetscObject)A,"MatMPIBAIJSetPreallocation_C",&f);CHKERRQ(ierr);} if (!f) {ierr = PetscObjectQueryFunction((PetscObject)A,"MatSeqBAIJSetPreallocation_C",&f);CHKERRQ(ierr);} if ( f) {*baij = PETSC_TRUE; goto done;}; if (!f) {ierr = PetscObjectQueryFunction((PetscObject)A,"MatMPISBAIJSetPreallocation_C",&f);CHKERRQ(ierr);} if (!f) {ierr = PetscObjectQueryFunction((PetscObject)A,"MatSeqSBAIJSetPreallocation_C",&f);CHKERRQ(ierr);} if ( f) {*sbaij = PETSC_TRUE; goto done;}; done: PetscFunctionReturn(0); } #ifndef MatNullSpaceFunction typedef PetscErrorCode MatNullSpaceFunction(MatNullSpace,Vec,void*); #endif /* ---------------------------------------------------------------- */ #undef __FUNCT__ #define __FUNCT__ "MatFactorInfoDefaults" static PetscErrorCode MatFactorInfoDefaults(PetscBool incomplete,PetscBool cholesky, MatFactorInfo *info) { PetscErrorCode ierr; PetscFunctionBegin; PetscValidPointer(info,2); ierr = MatFactorInfoInitialize(info);CHKERRQ(ierr); if (incomplete) { info->levels = (PetscReal)0; info->diagonal_fill = (PetscReal)0; info->fill = (PetscReal)1.0; info->usedt = (PetscReal)0; info->dt = (PetscReal)PETSC_DEFAULT; info->dtcount = (PetscReal)PETSC_DEFAULT; info->dtcol = (PetscReal)PETSC_DEFAULT; info->zeropivot = (PetscReal)100.0*PETSC_MACHINE_EPSILON; info->pivotinblocks = (PetscReal)1; } else { info->fill = (PetscReal)5.0; info->dtcol = (PetscReal)1.e-6; info->zeropivot = (PetscReal)100.0*PETSC_MACHINE_EPSILON; info->pivotinblocks = (PetscReal)1; } if (incomplete) { if (cholesky) info->shifttype = (PetscReal)MAT_SHIFT_POSITIVE_DEFINITE; else info->shifttype = (PetscReal)MAT_SHIFT_NONZERO; info->shiftamount = (PetscReal)100.0*PETSC_MACHINE_EPSILON; } else { info->shifttype = (PetscReal)MAT_SHIFT_NONE; info->shiftamount = (PetscReal)0.0; } PetscFunctionReturn(0); } /* ---------------------------------------------------------------- */ #undef __FUNCT__ #define __FUNCT__ "KSPSetIterationNumber" static PetscErrorCode KSPSetIterationNumber(KSP ksp, PetscInt its) { PetscFunctionBegin; PetscValidHeaderSpecific(ksp,KSP_CLASSID,1); if (its < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE, "iteration number must be nonnegative"); ksp->its = its; PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "KSPSetResidualNorm" static PetscErrorCode KSPSetResidualNorm(KSP ksp, PetscReal rnorm) { PetscFunctionBegin; PetscValidHeaderSpecific(ksp,KSP_CLASSID,1); if (rnorm < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE, "residual norm must be nonnegative"); ksp->rnorm = rnorm; PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "KSPConvergenceTestCall" static PetscErrorCode KSPConvergenceTestCall(KSP ksp, PetscInt its, PetscReal rnorm, KSPConvergedReason *reason) { PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(ksp,KSP_CLASSID,1); PetscValidPointer(reason,4); if (its < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE, "iteration number must be nonnegative"); if (rnorm < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE, "residual norm must be nonnegative"); ierr = (*ksp->converged)(ksp,its,rnorm,reason,ksp->cnvP);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "KSPSetConvergedReason" static PetscErrorCode KSPSetConvergedReason(KSP ksp, KSPConvergedReason reason) { PetscFunctionBegin; PetscValidHeaderSpecific(ksp,KSP_CLASSID,1); ksp->reason = reason; PetscFunctionReturn(0); } /* ---------------------------------------------------------------- */ #undef __FUNCT__ #define __FUNCT__ "SNESConvergenceTestCall" static PetscErrorCode SNESConvergenceTestCall(SNES snes, PetscInt its, PetscReal xnorm, PetscReal ynorm, PetscReal fnorm, SNESConvergedReason *reason) { PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(snes,SNES_CLASSID,1); PetscValidPointer(reason,4); if (its < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE, "iteration number must be nonnegative"); if (xnorm < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE, "solution norm must be nonnegative"); if (ynorm < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE, "step norm must be nonnegative"); if (fnorm < 0) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE, "function norm must be nonnegative"); ierr = (*snes->ops->converged)(snes,its,xnorm,ynorm,fnorm,reason,snes->cnvP);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESGetUseMFFD" static PetscErrorCode SNESGetUseMFFD(SNES snes,PetscBool *flag) { PetscErrorCode (*jac)(SNES,Vec,Mat,Mat,void*) = PETSC_NULL; Mat J = PETSC_NULL; PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(snes,SNES_CLASSID,1); PetscValidPointer(flag,2); *flag = PETSC_FALSE; ierr = SNESGetJacobian(snes,&J,0,&jac,0);CHKERRQ(ierr); if (J) { ierr = PetscObjectTypeCompare((PetscObject)J,MATMFFD,flag);CHKERRQ(ierr); } else if (jac == MatMFFDComputeJacobian) *flag = PETSC_TRUE; PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESSetUseMFFD" static PetscErrorCode SNESSetUseMFFD(SNES snes,PetscBool flag) { const char* prefix = PETSC_NULL; PetscBool flg = PETSC_FALSE; Vec r = PETSC_NULL; Mat A = PETSC_NULL,B = PETSC_NULL,J = PETSC_NULL; void* funP = PETSC_NULL; void* jacP = PETSC_NULL; PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(snes,SNES_CLASSID,1); ierr = SNESGetUseMFFD(snes,&flg);CHKERRQ(ierr); if ( flg && flag) PetscFunctionReturn(0); if (!flg && !flag) PetscFunctionReturn(0); if ( flg && !flag) { SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE, "cannot change matrix-free once it is set"); PetscFunctionReturn(PETSC_ERR_ARG_WRONGSTATE); } ierr = SNESGetOptionsPrefix(snes,&prefix);CHKERRQ(ierr); ierr = SNESGetFunction(snes,&r,0,&funP);CHKERRQ(ierr); ierr = SNESGetJacobian(snes,&A,&B,0,&jacP);CHKERRQ(ierr); if (!r) { SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"SNESSetFunction() must be called first"); PetscFunctionReturn(PETSC_ERR_ARG_WRONGSTATE); } ierr = MatCreateSNESMF(snes,&J);CHKERRQ(ierr); ierr = MatSetOptionsPrefix(J,prefix);CHKERRQ(ierr); ierr = MatSetFromOptions(J);CHKERRQ(ierr); if (!B) { KSP ksp; PC pc; PetscBool shell,python; ierr = SNESSetJacobian(snes,J,J,MatMFFDComputeJacobian,jacP);CHKERRQ(ierr); ierr = SNESGetKSP(snes,&ksp);CHKERRQ(ierr); ierr = KSPGetPC(ksp,&pc);CHKERRQ(ierr); ierr = PetscObjectTypeCompare((PetscObject)pc,PCSHELL,&shell);CHKERRQ(ierr); ierr = PetscObjectTypeCompare((PetscObject)pc,PCPYTHON,&python);CHKERRQ(ierr); if (!shell && !python) { ierr = PCSetType(pc,PCNONE);CHKERRQ(ierr); } } else { ierr = SNESSetJacobian(snes,J,0,0,0);CHKERRQ(ierr); } ierr = MatDestroy(&J);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESGetUseFDColoring" static PetscErrorCode SNESGetUseFDColoring(SNES snes,PetscBool *flag) { PetscErrorCode (*jac)(SNES,Vec,Mat,Mat,void*) = PETSC_NULL; PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(snes,SNES_CLASSID,1); PetscValidPointer(flag,2); *flag = PETSC_FALSE; ierr = SNESGetJacobian(snes,0,0,&jac,0);CHKERRQ(ierr); if (jac == SNESComputeJacobianDefaultColor) *flag = PETSC_TRUE; PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESSetUseFDColoring" static PetscErrorCode SNESSetUseFDColoring(SNES snes,PetscBool flag) { PetscBool flg = PETSC_FALSE; PetscErrorCode (*fun)(SNES,Vec,Vec,void*) = PETSC_NULL; void* funP = PETSC_NULL; Mat A = PETSC_NULL,B = PETSC_NULL; PetscErrorCode (*jac)(SNES,Vec,Mat,Mat,void*) = PETSC_NULL; void* jacP = PETSC_NULL; PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(snes,SNES_CLASSID,1); ierr = SNESGetUseFDColoring(snes,&flg);CHKERRQ(ierr); if ( flg && flag) PetscFunctionReturn(0); if (!flg && !flag) PetscFunctionReturn(0); if ( flg && !flag) { SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE, "cannot change colored finite diferences once it is set"); PetscFunctionReturn(PETSC_ERR_ARG_WRONGSTATE); } ierr = SNESGetFunction(snes,NULL,&fun,&funP);CHKERRQ(ierr); ierr = SNESGetJacobian(snes,&A,&B,&jac,&jacP);CHKERRQ(ierr); ierr = SNESSetJacobian(snes,A,B,SNESComputeJacobianDefaultColor,0);CHKERRQ(ierr); { DM dm; DMSNES sdm; ierr = SNESGetDM(snes,&dm);CHKERRQ(ierr); ierr = DMGetDMSNES(dm,&sdm);CHKERRQ(ierr); sdm->jacobianctx = NULL; } PetscFunctionReturn(0); } /* ---------------------------------------------------------------- */ #undef __FUNCT__ #define __FUNCT__ "TSSetTimeStepNumber" static PetscErrorCode TSSetTimeStepNumber(TS ts, PetscInt step) { PetscFunctionBegin; PetscValidHeaderSpecific(ts,TS_CLASSID,1); ts->steps = step; PetscFunctionReturn(0); } /* ---------------------------------------------------------------- */ #undef __FUNCT__ #define __FUNCT__ "DMDACreateND" static PetscErrorCode DMDACreateND(MPI_Comm comm, PetscInt dim,PetscInt dof, PetscInt M,PetscInt N,PetscInt P, PetscInt m,PetscInt n,PetscInt p, const PetscInt lx[],const PetscInt ly[],const PetscInt lz[], DMBoundaryType bx,DMBoundaryType by,DMBoundaryType bz, DMDAStencilType stencil_type,PetscInt stencil_width, DM *dm) { DM da; PetscErrorCode ierr; PetscFunctionBegin; PetscValidPointer(dm,18); ierr = DMDACreate(comm,&da);CHKERRQ(ierr); ierr = DMSetDimension(da,dim);CHKERRQ(ierr); ierr = DMDASetDof(da,dof);CHKERRQ(ierr); ierr = DMDASetSizes(da,M,N,P);CHKERRQ(ierr); ierr = DMDASetNumProcs(da,m,n,p);CHKERRQ(ierr); ierr = DMDASetOwnershipRanges(da,lx,ly,lz);CHKERRQ(ierr); ierr = DMDASetBoundaryType(da,bx,by,bz);CHKERRQ(ierr); ierr = DMDASetStencilType(da,stencil_type);CHKERRQ(ierr); ierr = DMDASetStencilWidth(da,stencil_width);CHKERRQ(ierr); *dm = (DM)da; PetscFunctionReturn(0); } /* ---------------------------------------------------------------- */ #undef __FUNCT__ #define __FUNCT__ "" #endif/* PETSC4PY_CUSTOM_H*/ /* Local variables: c-basic-offset: 2 indent-tabs-mode: nil End: */ petsc4py-3.7.0/src/include/scalar.h0000644000175000001440000000133412711377604017722 0ustar dalcinlusers00000000000000#ifndef PETSC4PY_SCALAR_H #define PETSC4PY_SCALAR_H #include "Python.h" #include "petsc.h" PETSC_STATIC_INLINE PyObject *PyPetscScalar_FromPetscScalar(PetscScalar s) { #if defined(PETSC_USE_SCALAR_COMPLEX) double a = (double)PetscRealPart(s); double b = (double)PetscImaginaryPart(s); return PyComplex_FromDoubles(a, b); #else return PyFloat_FromDouble((double)s); #endif } PETSC_STATIC_INLINE PetscScalar PyPetscScalar_AsPetscScalar(PyObject *o) { #if defined(PETSC_USE_SCALAR_COMPLEX) Py_complex cval = PyComplex_AsCComplex(o); PetscReal a = (PetscReal)cval.real; PetscReal b = (PetscReal)cval.imag; return a + b * PETSC_i; #else return (PetscScalar)PyFloat_AsDouble(o); #endif } #endif/*PETSC4PY_SCALAR_H*/ petsc4py-3.7.0/src/PETSc/0000755000175000001440000000000012711405164015567 5ustar dalcinlusers00000000000000petsc4py-3.7.0/src/PETSc/petscopt.pxi0000644000175000001440000001505012711377604020162 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef struct _n_PetscOptions ctypedef _n_PetscOptions* PetscOptions int PetscOptionsCreate(PetscOptions*) int PetscOptionsDestroy(PetscOptions*) int PetscOptionsView(PetscOptions,PetscViewer) int PetscOptionsClear(PetscOptions) int PetscOptionsSetFromOptions(PetscOptions) int PetscOptionsPrefixPush(PetscOptions,char[]) int PetscOptionsPrefixPop(PetscOptions) int PetscOptionsHasName(PetscOptions,char[],char[],PetscBool*) int PetscOptionsSetAlias(PetscOptions,char[],char[]) int PetscOptionsSetValue(PetscOptions,char[],char[]) int PetscOptionsClearValue(PetscOptions,char[]) int PetscOptionsInsertString(PetscOptions,char[]) int PetscOptionsInsertFile(PetscOptions,char[]) int PetscOptionsGetAll(PetscOptions,char*[]) int PetscOptionsGetBool(PetscOptions,char[],char[],PetscBool*,PetscBool*) int PetscOptionsGetInt(PetscOptions,char[],char[],PetscInt*,PetscBool*) int PetscOptionsGetReal(PetscOptions,char[],char[],PetscReal*,PetscBool*) int PetscOptionsGetScalar(PetscOptions,char[],char[],PetscScalar*,PetscBool*) int PetscOptionsGetString(PetscOptions,char[],char[],char[],size_t,PetscBool*) ctypedef struct _p_PetscToken ctypedef _p_PetscToken* PetscToken int PetscTokenCreate(char[],char,PetscToken*) int PetscTokenDestroy(PetscToken*) int PetscTokenFind(PetscToken,char*[]) int PetscOptionsValidKey(char[],PetscBool*) # cdef getprefix(prefix, deft=None): if prefix is None: prefix = deft elif isinstance(prefix, Options): prefix = prefix.prefix elif isinstance(prefix, Object): prefix = prefix.getOptionsPrefix() elif not isinstance(prefix, str): raise TypeError('option prefix must be string') if not prefix: return None if prefix.count(' '): raise ValueError('option prefix should not have spaces') if prefix.startswith('-'): raise ValueError('option prefix should not start with a hypen') return prefix # cdef opt2str(const_char *pre, const_char *name): p = bytes2str(pre) if pre!=NULL else None n = bytes2str(name) if name[0]!=c'-' else bytes2str(&name[1]) return '(prefix:%s, name:%s)' % (p, n) cdef getopt_Bool(PetscOptions opt, const_char *pre, const_char *name, object deft): cdef PetscBool value = PETSC_FALSE cdef PetscBool flag = PETSC_FALSE CHKERR( PetscOptionsGetBool(opt, pre, name, &value, &flag) ) if flag==PETSC_TRUE: return value if deft is not None: return deft raise KeyError(opt2str(pre, name)) cdef getopt_Int(PetscOptions opt, const_char *pre, const_char *name, object deft): cdef PetscInt value = 0 cdef PetscBool flag = PETSC_FALSE CHKERR( PetscOptionsGetInt(opt, pre, name, &value, &flag) ) if flag==PETSC_TRUE: return toInt(value) if deft is not None: return deft raise KeyError(opt2str(pre, name)) cdef getopt_Real(PetscOptions opt, const_char *pre, const_char *name, object deft): cdef PetscReal value = 0 cdef PetscBool flag = PETSC_FALSE CHKERR( PetscOptionsGetReal(opt, pre, name, &value, &flag) ) if flag==PETSC_TRUE: return toReal(value) if deft is not None: return deft raise KeyError(opt2str(pre, name)) cdef getopt_Scalar(PetscOptions opt, const_char *pre, const_char *name, object deft): cdef PetscScalar value = 0 cdef PetscBool flag = PETSC_FALSE CHKERR( PetscOptionsGetScalar(opt, pre, name, &value, &flag) ) if flag==PETSC_TRUE: return toScalar(value) if deft is not None: return deft raise KeyError(opt2str(pre, name)) cdef getopt_String(PetscOptions opt, const_char *pre, const_char *name, object deft): cdef char value[1024+1] cdef PetscBool flag = PETSC_FALSE CHKERR( PetscOptionsGetString(opt, pre, name, value, 1024, &flag) ) if flag==PETSC_TRUE: return bytes2str(value) if deft is not None: return deft raise KeyError(opt2str(pre, name)) cdef enum PetscOptType: OPT_BOOL OPT_INT OPT_REAL OPT_SCALAR OPT_STRING cdef getpair(prefix, name, const_char **pr, const_char **nm): # -- cdef const_char *p = NULL prefix = str2bytes(prefix, &p) if p != NULL and p[0] == c'-': p = &p[1] # -- cdef const_char *n = NULL name = str2bytes(name, &n) if n != NULL and n[0] != c'-': name = b'-' + name name = str2bytes(name, &n) # -- pr[0] = p nm[0] = n return (prefix, name) cdef getopt(PetscOptions opt, PetscOptType otype, prefix, name, deft): cdef const_char *pr = NULL cdef const_char *nm = NULL tmp = getpair(prefix, name, &pr, &nm) if otype == OPT_BOOL : return getopt_Bool (opt, pr, nm, deft) if otype == OPT_INT : return getopt_Int (opt, pr, nm, deft) if otype == OPT_REAL : return getopt_Real (opt, pr, nm, deft) if otype == OPT_SCALAR : return getopt_Scalar (opt, pr, nm, deft) if otype == OPT_STRING : return getopt_String (opt, pr, nm, deft) # simple minded options parser cdef tokenize(options): cdef PetscToken t = NULL cdef const_char *s = NULL cdef const_char *p = NULL options = str2bytes(options, &s) cdef list tokens = [] CHKERR( PetscTokenCreate(s, c' ', &t) ) try: CHKERR( PetscTokenFind(t, &p) ) while p != NULL: tokens.append(bytes2str(p)) CHKERR( PetscTokenFind(t, &p) ) finally: CHKERR( PetscTokenDestroy(&t) ) return tokens cdef bint iskey(key): cdef const_char *k = NULL cdef PetscBool b = PETSC_FALSE if key: key = str2bytes(key, &k) CHKERR( PetscOptionsValidKey(k, &b) ) if b == PETSC_TRUE: return True return False cdef gettok(tokens): if tokens: return tokens.pop(0) else: return None cdef getkey(key, prefix): if not iskey(key): return None key = key[1:] if key[0] == '-': key = key[1:] if not key.startswith(prefix): return None return key.replace(prefix, '', 1) cdef parseopt(options, prefix): if isinstance(options, str): tokens = tokenize(options) else: tokens = list(options) prefix = prefix or '' # parser loop opts = {} first = gettok(tokens) while first: key = getkey(first, prefix) if not key: first = gettok(tokens) else: second = gettok(tokens) if getkey(second, prefix): value = None first = second else: value = second first = gettok(tokens) opts[key] = value # we are done return opts # petsc4py-3.7.0/src/PETSc/Viewer.pyx0000644000175000001440000003211712711377604017605 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class ViewerType(object): SOCKET = S_(PETSCVIEWERSOCKET) ASCII = S_(PETSCVIEWERASCII) BINARY = S_(PETSCVIEWERBINARY) STRING = S_(PETSCVIEWERSTRING) DRAW = S_(PETSCVIEWERDRAW) VU = S_(PETSCVIEWERVU) MATHEMATICA = S_(PETSCVIEWERMATHEMATICA) HDF5 = S_(PETSCVIEWERHDF5) NETCDF = S_(PETSCVIEWERNETCDF) VTK = S_(PETSCVIEWERVTK) MATLAB = S_(PETSCVIEWERMATLAB) SAWS = S_(PETSCVIEWERSAWS) class ViewerFormat(object): DEFAULT = PETSC_VIEWER_DEFAULT ASCII_MATLAB = PETSC_VIEWER_ASCII_MATLAB ASCII_MATHEMATICA = PETSC_VIEWER_ASCII_MATHEMATICA ASCII_IMPL = PETSC_VIEWER_ASCII_IMPL ASCII_INFO = PETSC_VIEWER_ASCII_INFO ASCII_INFO_DETAIL = PETSC_VIEWER_ASCII_INFO_DETAIL ASCII_COMMON = PETSC_VIEWER_ASCII_COMMON ASCII_SYMMODU = PETSC_VIEWER_ASCII_SYMMODU ASCII_INDEX = PETSC_VIEWER_ASCII_INDEX ASCII_DENSE = PETSC_VIEWER_ASCII_DENSE ASCII_MATRIXMARKET= PETSC_VIEWER_ASCII_MATRIXMARKET ASCII_VTK = PETSC_VIEWER_ASCII_VTK ASCII_VTK_CELL = PETSC_VIEWER_ASCII_VTK_CELL ASCII_VTK_COORDS = PETSC_VIEWER_ASCII_VTK_COORDS ASCII_PCICE = PETSC_VIEWER_ASCII_PCICE ASCII_PYTHON = PETSC_VIEWER_ASCII_PYTHON ASCII_FACTOR_INFO = PETSC_VIEWER_ASCII_FACTOR_INFO ASCII_LATEX = PETSC_VIEWER_ASCII_LATEX ASCII_XML = PETSC_VIEWER_ASCII_XML DRAW_BASIC = PETSC_VIEWER_DRAW_BASIC DRAW_LG = PETSC_VIEWER_DRAW_LG DRAW_CONTOUR = PETSC_VIEWER_DRAW_CONTOUR DRAW_PORTS = PETSC_VIEWER_DRAW_PORTS VTK_VTS = PETSC_VIEWER_VTK_VTS VTK_VTR = PETSC_VIEWER_VTK_VTR VTK_VTU = PETSC_VIEWER_VTK_VTU BINARY_MATLAB = PETSC_VIEWER_BINARY_MATLAB NATIVE = PETSC_VIEWER_NATIVE HDF5_VIZ = PETSC_VIEWER_HDF5_VIZ NOFORMAT = PETSC_VIEWER_NOFORMAT class FileMode(object): # native READ = PETSC_FILE_MODE_READ WRITE = PETSC_FILE_MODE_WRITE APPEND = PETSC_FILE_MODE_APPEND UPDATE = PETSC_FILE_MODE_UPDATE APPEND_UPDATE = PETSC_FILE_MODE_APPEND_UPDATE # aliases R, W, A, U = READ, WRITE, APPEND, UPDATE AU = UA = APPEND_UPDATE class DrawSize(object): # native FULL_SIZE = PETSC_DRAW_FULL_SIZE HALF_SIZE = PETSC_DRAW_HALF_SIZE THIRD_SIZE = PETSC_DRAW_THIRD_SIZE QUARTER_SIZE = PETSC_DRAW_QUARTER_SIZE # aliases FULL = FULL_SIZE HALF = HALF_SIZE THIRD = THIRD_SIZE QUARTER = QUARTER_SIZE # -------------------------------------------------------------------- cdef class Viewer(Object): Type = ViewerType Format = ViewerFormat Mode = FileMode Size = DrawSize # def __cinit__(self): self.obj = &self.vwr self.vwr = NULL def __call__(self, Object obj): assert obj.obj != NULL CHKERR( PetscObjectView(obj.obj[0], self.vwr) ) # def view(self, obj=None): if obj is None: CHKERR( PetscViewerView(self.vwr, NULL) ) elif isinstance(obj, Viewer): CHKERR( PetscViewerView(self.vwr, (obj).vwr) ) else: assert (obj).obj != NULL CHKERR( PetscObjectView((obj).obj[0], self.vwr) ) def destroy(self): CHKERR( PetscViewerDestroy(&self.vwr) ) return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscViewer newvwr = NULL CHKERR( PetscViewerCreate(ccomm, &newvwr) ) PetscCLEAR(self.obj); self.vwr = newvwr return self def createASCII(self, name, mode=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef PetscFileMode cmode = PETSC_FILE_MODE_WRITE if mode is not None: filemode(mode) cdef PetscViewer newvwr = NULL CHKERR( PetscViewerCreate(ccomm, &newvwr) ) PetscCLEAR(self.obj); self.vwr = newvwr CHKERR( PetscViewerSetType(self.vwr, PETSCVIEWERASCII) ) CHKERR( PetscViewerFileSetMode(self.vwr, cmode) ) CHKERR( PetscViewerFileSetName(self.vwr, cname) ) return self def createBinary(self, name, mode=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef PetscFileMode cmode = filemode(mode) cdef PetscViewer newvwr = NULL CHKERR( PetscViewerBinaryOpen(ccomm, cname, cmode, &newvwr) ) PetscCLEAR(self.obj); self.vwr = newvwr return self def createMPIIO(self, name, mode=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef PetscFileMode cmode = filemode(mode) cdef PetscViewer newvwr = NULL CHKERR( PetscViewerCreate(ccomm, &newvwr) ) PetscCLEAR(self.obj); self.vwr = newvwr CHKERR( PetscViewerSetType(self.vwr, PETSCVIEWERBINARY) ) CHKERR( PetscViewerBinarySetUseMPIIO(self.vwr, PETSC_TRUE) ) CHKERR( PetscViewerFileSetMode(self.vwr, cmode) ) CHKERR( PetscViewerFileSetName(self.vwr, cname) ) return self def createVTK(self, name, mode=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef PetscFileMode cmode = filemode(mode) cdef PetscViewer newvwr = NULL CHKERR( PetscViewerCreate(ccomm, &newvwr) ) PetscCLEAR(self.obj); self.vwr = newvwr CHKERR( PetscViewerSetType(self.vwr, PETSCVIEWERVTK) ) CHKERR( PetscViewerFileSetMode(self.vwr, cmode) ) CHKERR( PetscViewerFileSetName(self.vwr, cname) ) return self def createHDF5(self, name, mode=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef PetscFileMode cmode = filemode(mode) cdef PetscViewer newvwr = NULL CHKERR( PetscViewerCreate(ccomm, &newvwr) ) PetscCLEAR(self.obj); self.vwr = newvwr CHKERR( PetscViewerSetType(self.vwr, PETSCVIEWERHDF5) ) CHKERR( PetscViewerFileSetMode(self.vwr, cmode) ) CHKERR( PetscViewerFileSetName(self.vwr, cname) ) return self def createNetCDF(self, name, mode=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef PetscFileMode cmode = filemode(mode) cdef PetscViewer newvwr = NULL CHKERR( PetscViewerCreate(ccomm, &newvwr) ) PetscCLEAR(self.obj); self.vwr = newvwr CHKERR( PetscViewerSetType(self.vwr, PETSCVIEWERNETCDF) ) CHKERR( PetscViewerFileSetMode(self.vwr, cmode) ) CHKERR( PetscViewerFileSetName(self.vwr, cname) ) return self def createDraw(self, display=None, title=None, position=None, size=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef const_char *cdisplay = NULL cdef const_char *ctitle = NULL display = str2bytes(display, &cdisplay) title = str2bytes(title, &ctitle) cdef int x, y, h, w x = y = h = w = PETSC_DECIDE if position not in (None, PETSC_DECIDE): x, y = position if size not in (None, PETSC_DECIDE): try: w, h = size except TypeError: w = h = size cdef PetscViewer newvwr = NULL CHKERR( PetscViewerDrawOpen(ccomm, cdisplay, ctitle, x, y, w, h, &newvwr) ) PetscCLEAR(self.obj); self.vwr = newvwr return self def setType(self, vwr_type): cdef PetscViewerType cval = NULL vwr_type = str2bytes(vwr_type, &cval) CHKERR( PetscViewerSetType(self.vwr, cval) ) def getType(self): cdef PetscViewerType cval = NULL CHKERR( PetscViewerGetType(self.vwr, &cval) ) return bytes2str(cval) def getFormat(self): cdef PetscViewerFormat format = PETSC_VIEWER_DEFAULT CHKERR( PetscViewerGetFormat(self.vwr, &format) ) return format def pushFormat(self, format): CHKERR( PetscViewerPushFormat(self.vwr, format) ) def popFormat(self): CHKERR( PetscViewerPopFormat(self.vwr) ) @classmethod def STDOUT(cls, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef Viewer viewer = Viewer() viewer.vwr = PETSC_VIEWER_STDOUT_(ccomm) PetscINCREF(viewer.obj) return viewer @classmethod def STDERR(cls, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef Viewer viewer = Viewer() viewer.vwr = PETSC_VIEWER_STDERR_(ccomm) PetscINCREF(viewer.obj) return viewer @classmethod def ASCII(cls, name, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef Viewer viewer = Viewer() CHKERR( PetscViewerASCIIOpen(ccomm, cname, &viewer.vwr) ) return viewer @classmethod def BINARY(cls, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef Viewer viewer = Viewer() viewer.vwr = PETSC_VIEWER_BINARY_(ccomm) PetscINCREF(viewer.obj) return viewer @classmethod def DRAW(cls, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef Viewer viewer = Viewer() viewer.vwr = PETSC_VIEWER_DRAW_(ccomm) PetscINCREF(viewer.obj) return viewer # --- methods specific to file viewers --- def flush(self): CHKERR( PetscViewerFlush(self.vwr) ) def setFileMode(self, mode): CHKERR( PetscViewerFileSetMode(self.vwr, filemode(mode)) ) def getFileMode(self): cdef PetscFileMode mode = PETSC_FILE_MODE_READ CHKERR( PetscViewerFileGetMode(self.vwr, &mode) ) return mode def setFileName(self, name): cdef const_char *cval = NULL name = str2bytes(name, &cval) CHKERR( PetscViewerFileSetName(self.vwr, cval) ) def getFileName(self): cdef const_char *cval = NULL CHKERR( PetscViewerFileGetName(self.vwr, &cval) ) return bytes2str(cval) # --- methods specific to draw viewers --- def setDrawInfo(self, display=None, title=None, position=None, size=None): cdef const_char *cdisplay = NULL cdef const_char *ctitle = NULL display = str2bytes(display, &cdisplay) title = str2bytes(title, &ctitle) cdef int x, y, h, w x = y = h = w = PETSC_DECIDE if position not in (None, PETSC_DECIDE): x, y = position if size not in (None, PETSC_DECIDE): try: w, h = size except TypeError: w = h = size CHKERR( PetscViewerDrawSetInfo(self.vwr, cdisplay, ctitle, x, y, w, h) ) def clearDraw(self): CHKERR( PetscViewerDrawClear(self.vwr) ) # -------------------------------------------------------------------- cdef class ViewerHDF5(Viewer): def create(self, name, mode=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef PetscFileMode cmode = filemode(mode) cdef PetscViewer newvwr = NULL CHKERR( PetscViewerCreate(ccomm, &newvwr) ) PetscCLEAR(self.obj); self.vwr = newvwr CHKERR( PetscViewerSetType(self.vwr, PETSCVIEWERHDF5) ) CHKERR( PetscViewerFileSetMode(self.vwr, cmode) ) CHKERR( PetscViewerFileSetName(self.vwr, cname) ) return self def getTimestep(self): cdef PetscInt ctimestep = 0 CHKERR( PetscViewerHDF5GetTimestep(self.vwr, &ctimestep) ) return toInt(ctimestep) def setTimestep(self, timestep): CHKERR( PetscViewerHDF5SetTimestep(self.vwr, asInt(timestep)) ) def incrementTimestep(self): CHKERR( PetscViewerHDF5IncrementTimestep(self.vwr) ) def pushGroup(self, group): cdef const_char *cgroup = NULL group = str2bytes(group, &cgroup) CHKERR( PetscViewerHDF5PushGroup(self.vwr, cgroup) ) def popGroup(self): CHKERR( PetscViewerHDF5PopGroup(self.vwr) ) def getGroup(self): cdef const_char *cgroup = NULL CHKERR( PetscViewerHDF5GetGroup(self.vwr, &cgroup) ) return bytes2str(cgroup) # -------------------------------------------------------------------- del ViewerType del ViewerFormat del FileMode del DrawSize # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscmpi.pxi0000644000175000001440000000565512711377604020157 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from * nogil: MPI_Comm MPI_COMM_NULL MPI_Comm MPI_COMM_SELF MPI_Comm MPI_COMM_WORLD enum: MPI_IDENT enum: MPI_CONGRUENT int MPI_Comm_compare(MPI_Comm,MPI_Comm,int*) int MPI_Comm_size(MPI_Comm,int*) int MPI_Comm_rank(MPI_Comm,int*) int MPI_Barrier(MPI_Comm) int MPI_Initialized(int*) int MPI_Finalized(int*) ctypedef int MPI_Fint MPI_Fint MPI_Comm_c2f(MPI_Comm) cdef extern from * nogil: MPI_Comm PETSC_COMM_SELF MPI_Comm PETSC_COMM_WORLD int PetscCommDuplicate(MPI_Comm,MPI_Comm*,int*) int PetscCommDestroy(MPI_Comm*) # -------------------------------------------------------------------- cdef extern from "cython.h": void *Cython_ImportFunction(object, char[], char[]) except? NULL ctypedef MPI_Comm* PyMPICommGet(object) except NULL ctypedef object PyMPICommNew(MPI_Comm) cdef inline MPI_Comm mpi4py_Comm_Get(object comm) except *: from mpi4py import MPI cdef PyMPICommGet *commget = \ Cython_ImportFunction( MPI, b"PyMPIComm_Get", b"MPI_Comm *(PyObject *)") if commget == NULL: return MPI_COMM_NULL cdef MPI_Comm *ptr = commget(comm) if ptr == NULL: return MPI_COMM_NULL return ptr[0] cdef inline object mpi4py_Comm_New(MPI_Comm comm): from mpi4py import MPI cdef PyMPICommNew *commnew = \ Cython_ImportFunction( MPI, b"PyMPIComm_New", b"PyObject *(MPI_Comm)") if commnew == NULL: return None return commnew(comm) # -------------------------------------------------------------------- cdef inline int PetscCommDEALLOC(MPI_Comm* comm): if comm == NULL: return 0 cdef MPI_Comm tmp = comm[0] if tmp == MPI_COMM_NULL: return 0 comm[0] = MPI_COMM_NULL if not (PetscInitializeCalled): return 0 if (PetscFinalizeCalled): return 0 return PetscCommDestroy(&tmp) cdef inline MPI_Comm def_Comm(object comm, MPI_Comm defv) except *: cdef MPI_Comm retv = MPI_COMM_NULL if comm is None: retv = defv elif isinstance(comm, Comm): retv = (comm).comm elif type(comm).__module__ == 'mpi4py.MPI': retv = mpi4py_Comm_Get(comm) else: retv = (comm).comm return retv cdef inline Comm new_Comm(MPI_Comm comm): cdef Comm ob = Comm() ob.comm = comm return ob # -------------------------------------------------------------------- cdef inline int comm_size(MPI_Comm comm) except ? -1: if comm == MPI_COMM_NULL: raise ValueError("null communicator") cdef int size = 0 CHKERR( MPI_Comm_size(comm, &size) ) return size cdef inline int comm_rank(MPI_Comm comm) except ? -1: if comm == MPI_COMM_NULL: raise ValueError("null communicator") cdef int rank = 0 CHKERR( MPI_Comm_rank(comm, &rank) ) return rank # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/Scatter.pyx0000644000175000001440000000674112711377604017755 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef class Scatter(Object): Mode = ScatterMode # def __cinit__(self): self.obj = &self.sct self.sct = NULL def __call__(self, x, y, addv=None, mode=None): self.scatter(x, y, addv, mode) # def view(self, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( VecScatterView(self.sct, vwr) ) def destroy(self): CHKERR( VecScatterDestroy(&self.sct) ) return self def create(self, Vec vec_from not None, IS is_from, Vec vec_to not None, IS is_to): cdef PetscIS cisfrom = NULL, cisto = NULL if is_from is not None: cisfrom = is_from.iset if is_to is not None: cisto = is_to.iset cdef PetscScatter newsct = NULL CHKERR( VecScatterCreate( vec_from.vec, cisfrom, vec_to.vec, cisto, &newsct) ) PetscCLEAR(self.obj); self.sct = newsct return self def copy(self): cdef Scatter scatter = Scatter() CHKERR( VecScatterCopy(self.sct, &scatter.sct) ) return scatter @classmethod def toAll(cls, Vec vec not None): cdef Scatter scatter = Scatter() cdef Vec ovec = Vec() CHKERR( VecScatterCreateToAll( vec.vec, &scatter.sct, &ovec.vec) ) return (scatter, ovec) @classmethod def toZero(cls, Vec vec not None): cdef Scatter scatter = Scatter() cdef Vec ovec = Vec() CHKERR( VecScatterCreateToZero( vec.vec, &scatter.sct, &ovec.vec) ) return (scatter, ovec) # def begin(self, Vec vec_from not None, Vec vec_to not None, addv=None, mode=None): cdef PetscInsertMode caddv = insertmode(addv) cdef PetscScatterMode csctm = scattermode(mode) CHKERR( VecScatterBegin(self.sct, vec_from.vec, vec_to.vec, caddv, csctm) ) def end(self, Vec vec_from not None, Vec vec_to not None, addv=None, mode=None): cdef PetscInsertMode caddv = insertmode(addv) cdef PetscScatterMode csctm = scattermode(mode) CHKERR( VecScatterEnd(self.sct, vec_from.vec, vec_to.vec, caddv, csctm) ) # def scatterBegin(self, Vec vec_from not None, Vec vec_to not None, addv=None, mode=None): cdef PetscInsertMode caddv = insertmode(addv) cdef PetscScatterMode csctm = scattermode(mode) CHKERR( VecScatterBegin(self.sct, vec_from.vec, vec_to.vec, caddv, csctm) ) def scatterEnd(self, Vec vec_from not None, Vec vec_to not None, addv=None, mode=None): cdef PetscInsertMode caddv = insertmode(addv) cdef PetscScatterMode csctm = scattermode(mode) CHKERR( VecScatterEnd(self.sct, vec_from.vec, vec_to.vec, caddv, csctm) ) def scatter(self, Vec vec_from not None, Vec vec_to not None, addv=None, mode=None): cdef PetscInsertMode caddv = insertmode(addv) cdef PetscScatterMode csctm = scattermode(mode) CHKERR( VecScatterBegin(self.sct, vec_from.vec, vec_to.vec, caddv, csctm) ) CHKERR( VecScatterEnd(self.sct, vec_from.vec, vec_to.vec, caddv, csctm) ) # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscvwr.pxi0000644000175000001440000001172412711377604020202 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef char* PetscViewerType "const char*" PetscViewerType PETSCVIEWERSOCKET PetscViewerType PETSCVIEWERASCII PetscViewerType PETSCVIEWERBINARY PetscViewerType PETSCVIEWERSTRING PetscViewerType PETSCVIEWERDRAW PetscViewerType PETSCVIEWERVU PetscViewerType PETSCVIEWERMATHEMATICA PetscViewerType PETSCVIEWERNETCDF PetscViewerType PETSCVIEWERHDF5 PetscViewerType PETSCVIEWERVTK PetscViewerType PETSCVIEWERMATLAB PetscViewerType PETSCVIEWERSAWS ctypedef enum PetscViewerFormat: PETSC_VIEWER_DEFAULT PETSC_VIEWER_ASCII_MATLAB PETSC_VIEWER_ASCII_MATHEMATICA PETSC_VIEWER_ASCII_IMPL PETSC_VIEWER_ASCII_INFO PETSC_VIEWER_ASCII_INFO_DETAIL PETSC_VIEWER_ASCII_COMMON PETSC_VIEWER_ASCII_SYMMODU PETSC_VIEWER_ASCII_INDEX PETSC_VIEWER_ASCII_DENSE PETSC_VIEWER_ASCII_MATRIXMARKET PETSC_VIEWER_ASCII_VTK PETSC_VIEWER_ASCII_VTK_CELL PETSC_VIEWER_ASCII_VTK_COORDS PETSC_VIEWER_ASCII_PCICE PETSC_VIEWER_ASCII_PYTHON PETSC_VIEWER_ASCII_FACTOR_INFO PETSC_VIEWER_ASCII_LATEX PETSC_VIEWER_ASCII_XML PETSC_VIEWER_DRAW_BASIC PETSC_VIEWER_DRAW_LG PETSC_VIEWER_DRAW_CONTOUR PETSC_VIEWER_DRAW_PORTS PETSC_VIEWER_VTK_VTS PETSC_VIEWER_VTK_VTR PETSC_VIEWER_VTK_VTU PETSC_VIEWER_BINARY_MATLAB PETSC_VIEWER_NATIVE PETSC_VIEWER_HDF5_VIZ PETSC_VIEWER_NOFORMAT ctypedef enum PetscFileMode: PETSC_FILE_MODE_READ "FILE_MODE_READ" PETSC_FILE_MODE_WRITE "FILE_MODE_WRITE" PETSC_FILE_MODE_APPEND "FILE_MODE_APPEND" PETSC_FILE_MODE_UPDATE "FILE_MODE_UPDATE" PETSC_FILE_MODE_APPEND_UPDATE "FILE_MODE_APPEND_UPDATE" enum: PETSC_DRAW_FULL_SIZE enum: PETSC_DRAW_HALF_SIZE enum: PETSC_DRAW_THIRD_SIZE enum: PETSC_DRAW_QUARTER_SIZE int PetscViewerView(PetscViewer,PetscViewer) int PetscViewerDestroy(PetscViewer*) int PetscViewerCreate(MPI_Comm,PetscViewer*) int PetscViewerSetType(PetscViewer,PetscViewerType) int PetscViewerGetType(PetscViewer,PetscViewerType*) int PetscViewerSetOptionsPrefix(PetscViewer,char[]) int PetscViewerAppendOptionsPrefix(PetscViewer,char[]) int PetscViewerGetOptionsPrefix(PetscViewer,char*[]) int PetscViewerSetFromOptions(PetscViewer) int PetscViewerSetUp(PetscViewer) int PetscViewerASCIIOpen(MPI_Comm,char[],PetscViewer*) int PetscViewerBinaryCreate(MPI_Comm comm,PetscViewer*) int PetscViewerBinaryOpen(MPI_Comm,char[],PetscFileMode,PetscViewer*) int PetscViewerDrawOpen(MPI_Comm,char[],char[],int,int,int,int,PetscViewer*) int PetscViewerBinarySetUseMPIIO(PetscViewer,PetscBool) int PetscViewerSetFormat(PetscViewer,PetscViewerFormat) int PetscViewerGetFormat(PetscViewer,PetscViewerFormat*) int PetscViewerPushFormat(PetscViewer,PetscViewerFormat) int PetscViewerPopFormat(PetscViewer) int PetscViewerFileGetName(PetscViewer,char*[]) int PetscViewerFileSetName(PetscViewer,char[]) int PetscViewerFileGetMode(PetscViewer,PetscFileMode*) int PetscViewerFileSetMode(PetscViewer,PetscFileMode) int PetscViewerFlush(PetscViewer) int PetscViewerDrawClear(PetscViewer) int PetscViewerDrawSetInfo(PetscViewer,char[],char[],int,int,int,int) int PetscViewerHDF5GetTimestep(PetscViewer,PetscInt*) int PetscViewerHDF5SetTimestep(PetscViewer,PetscInt) int PetscViewerHDF5IncrementTimestep(PetscViewer) int PetscViewerHDF5PushGroup(PetscViewer,char[]) int PetscViewerHDF5PopGroup(PetscViewer) int PetscViewerHDF5GetGroup(PetscViewer,char*[]) PetscViewer PETSC_VIEWER_STDOUT_(MPI_Comm) except? NULL PetscViewer PETSC_VIEWER_STDOUT_SELF PetscViewer PETSC_VIEWER_STDOUT_WORLD PetscViewer PETSC_VIEWER_STDERR_(MPI_Comm) except? NULL PetscViewer PETSC_VIEWER_STDERR_SELF PetscViewer PETSC_VIEWER_STDERR_WORLD PetscViewer PETSC_VIEWER_BINARY_(MPI_Comm) except? NULL PetscViewer PETSC_VIEWER_BINARY_SELF PetscViewer PETSC_VIEWER_BINARY_WORLD PetscViewer PETSC_VIEWER_DRAW_(MPI_Comm) except? NULL PetscViewer PETSC_VIEWER_DRAW_SELF PetscViewer PETSC_VIEWER_DRAW_WORLD # --- cdef inline PetscFileMode filemode(object mode) except (-1): if mode is None: return PETSC_FILE_MODE_READ if isinstance(mode, str): if mode == 'r' : return PETSC_FILE_MODE_READ elif mode == 'w' : return PETSC_FILE_MODE_WRITE elif mode == 'a' : return PETSC_FILE_MODE_APPEND elif mode == 'r+' : return PETSC_FILE_MODE_UPDATE elif mode == 'w+' : return PETSC_FILE_MODE_UPDATE elif mode == 'a+' : return PETSC_FILE_MODE_APPEND_UPDATE elif mode == 'u' : return PETSC_FILE_MODE_UPDATE elif mode == 'au' : return PETSC_FILE_MODE_APPEND_UPDATE elif mode == 'ua' : return PETSC_FILE_MODE_APPEND_UPDATE return mode petsc4py-3.7.0/src/PETSc/petscksp.pxi0000644000175000001440000002261312711377604020160 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef char* PetscKSPType "const char*" PetscKSPType KSPRICHARDSON PetscKSPType KSPCHEBYSHEV PetscKSPType KSPCG PetscKSPType KSPGROPPCG PetscKSPType KSPPIPECG PetscKSPType KSPPIPECGRR PetscKSPType KSPCGNE PetscKSPType KSPNASH PetscKSPType KSPSTCG PetscKSPType KSPGLTR PetscKSPType KSPFCG PetscKSPType KSPPIPEFCG PetscKSPType KSPGMRES PetscKSPType KSPPIPEFGMRES PetscKSPType KSPFGMRES PetscKSPType KSPLGMRES PetscKSPType KSPDGMRES PetscKSPType KSPPGMRES PetscKSPType KSPTCQMR PetscKSPType KSPBCGS PetscKSPType KSPIBCGS PetscKSPType KSPFBCGS PetscKSPType KSPFBCGSR PetscKSPType KSPBCGSL PetscKSPType KSPCGS PetscKSPType KSPTFQMR PetscKSPType KSPCR PetscKSPType KSPPIPECR PetscKSPType KSPLSQR PetscKSPType KSPPREONLY PetscKSPType KSPQCG PetscKSPType KSPBICG PetscKSPType KSPMINRES PetscKSPType KSPSYMMLQ PetscKSPType KSPLCD #PetscKSPType KSPPYTHON PetscKSPType KSPGCR PetscKSPType KSPPIPEGCR PetscKSPType KSPTSIRM PetscKSPType KSPCGLS ctypedef enum PetscKSPNormType "KSPNormType": KSP_NORM_DEFAULT KSP_NORM_NONE KSP_NORM_PRECONDITIONED KSP_NORM_UNPRECONDITIONED KSP_NORM_NATURAL ctypedef enum PetscKSPConvergedReason "KSPConvergedReason": # iterating KSP_CONVERGED_ITERATING # converged KSP_CONVERGED_RTOL_NORMAL KSP_CONVERGED_ATOL_NORMAL KSP_CONVERGED_RTOL KSP_CONVERGED_ATOL KSP_CONVERGED_ITS KSP_CONVERGED_CG_NEG_CURVE KSP_CONVERGED_CG_CONSTRAINED KSP_CONVERGED_STEP_LENGTH KSP_CONVERGED_HAPPY_BREAKDOWN # diverged KSP_DIVERGED_NULL KSP_DIVERGED_MAX_IT "KSP_DIVERGED_ITS" KSP_DIVERGED_DTOL KSP_DIVERGED_BREAKDOWN KSP_DIVERGED_BREAKDOWN_BICG KSP_DIVERGED_NONSYMMETRIC KSP_DIVERGED_INDEFINITE_PC KSP_DIVERGED_NANORINF KSP_DIVERGED_INDEFINITE_MAT ctypedef int (*PetscKSPCtxDel)(void*) ctypedef int (*PetscKSPConvergedFunction)(PetscKSP, PetscInt, PetscReal, PetscKSPConvergedReason*, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscKSPMonitorFunction)(PetscKSP, PetscInt, PetscReal, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscKSPComputeRHSFunction)(PetscKSP, PetscVec, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscKSPComputeOpsFunction)(PetscKSP, PetscMat, PetscMat, void*) except PETSC_ERR_PYTHON int KSPCreate(MPI_Comm,PetscKSP* CREATE) int KSPDestroy(PetscKSP*) int KSPView(PetscKSP,PetscViewer OPTIONAL) int KSPSetType(PetscKSP,PetscKSPType) int KSPGetType(PetscKSP,PetscKSPType*) int KSPSetOptionsPrefix(PetscKSP,char[]) int KSPAppendOptionsPrefix(PetscKSP,char[]) int KSPGetOptionsPrefix(PetscKSP,char*[]) int KSPSetFromOptions(PetscKSP) int KSPSetTolerances(PetscKSP,PetscReal,PetscReal,PetscReal,PetscInt) int KSPGetTolerances(PetscKSP,PetscReal*,PetscReal*,PetscReal*,PetscInt*) int KSPSetNormType(PetscKSP,PetscKSPNormType) int KSPGetNormType(PetscKSP,PetscKSPNormType*) int KSPSetPCSide(PetscKSP,PetscPCSide) int KSPGetPCSide(PetscKSP,PetscPCSide*) int KSPSetConvergenceTest(PetscKSP,PetscKSPConvergedFunction,void*,PetscKSPCtxDel) int KSPSetResidualHistory(PetscKSP,PetscReal[],PetscInt,PetscBool) int KSPGetResidualHistory(PetscKSP,PetscReal*[],PetscInt*) int KSPLogResidualHistory(PetscKSP,PetscReal) int KSPConvergedDefaultCreate(void**) int KSPConvergedDefaultDestroy(void*) int KSPConvergedDefault(PetscKSP,PetscInt,PetscReal,PetscKSPConvergedReason*,void*) except PETSC_ERR_PYTHON int KSPConvergedSkip(PetscKSP,PetscInt,PetscReal,PetscKSPConvergedReason*,void*) except PETSC_ERR_PYTHON int KSPMonitorSet(PetscKSP,PetscKSPMonitorFunction,void*,PetscKSPCtxDel) int KSPMonitorCancel(PetscKSP) int KSPMonitor(PetscKSP,PetscInt,PetscReal) int KSPSetInitialGuessNonzero(PetscKSP,PetscBool) int KSPGetInitialGuessNonzero(PetscKSP,PetscBool*) int KSPSetInitialGuessKnoll(PetscKSP,PetscBool) int KSPGetInitialGuessKnoll(PetscKSP,PetscBool*) int KSPSetUseFischerGuess(PetscKSP,PetscInt,PetscInt) int KSPGetComputeEigenvalues(PetscKSP,PetscBool*) int KSPSetComputeEigenvalues(PetscKSP,PetscBool) int KSPGetComputeSingularValues(PetscKSP,PetscBool*) int KSPSetComputeSingularValues(PetscKSP,PetscBool) int KSPSetComputeRHS(PetscKSP,PetscKSPComputeRHSFunction,void*) int KSPSetComputeOperators(PetscKSP,PetscKSPComputeOpsFunction,void*) int KSPSetOperators(PetscKSP,PetscMat,PetscMat) int KSPGetOperators(PetscKSP,PetscMat*,PetscMat*) int KSPGetOperatorsSet(PetscKSP,PetscBool*,PetscBool*) int KSPSetPC(PetscKSP,PetscPC) int KSPGetPC(PetscKSP,PetscPC*) int KSPGetDM(PetscKSP,PetscDM*) int KSPSetDM(PetscKSP,PetscDM) int KSPSetDMActive(PetscKSP,PetscBool) int KSPSetUp(PetscKSP) int KSPReset(PetscKSP) int KSPSetUpOnBlocks(PetscKSP) int KSPSolve(PetscKSP,PetscVec,PetscVec) int KSPSolveTranspose(PetscKSP,PetscVec,PetscVec) int KSPGetRhs(PetscKSP,PetscVec*) int KSPGetSolution(PetscKSP,PetscVec*) int KSPGetConvergedReason(PetscKSP,PetscKSPConvergedReason*) int KSPGetIterationNumber(PetscKSP,PetscInt*) int KSPGetResidualNorm(PetscKSP,PetscReal*) int KSPBuildSolution(PetscKSP,PetscVec,PetscVec*) int KSPBuildResidual(PetscKSP,PetscVec,PetscVec,PetscVec*) int KSPSetDiagonalScale(PetscKSP,PetscBool) int KSPGetDiagonalScale(PetscKSP,PetscBool*) int KSPSetDiagonalScaleFix(PetscKSP,PetscBool) int KSPGetDiagonalScaleFix(PetscKSP,PetscBool*) int KSPComputeExplicitOperator(PetscKSP,PetscMat*) int KSPComputeEigenvalues(PetscKSP,PetscInt,PetscReal[],PetscReal[],PetscInt*) int KSPComputeExtremeSingularValues(PetscKSP,PetscReal*,PetscReal*) int KSPCreateVecs(PetscKSP,PetscInt,PetscVec**,PetscInt,PetscVec**) int KSPGMRESSetRestart(PetscKSP,PetscInt) cdef extern from "custom.h" nogil: int KSPSetIterationNumber(PetscKSP,PetscInt) int KSPSetResidualNorm(PetscKSP,PetscReal) int KSPConvergenceTestCall(PetscKSP,PetscInt,PetscReal,PetscKSPConvergedReason*) int KSPSetConvergedReason(PetscKSP,PetscKSPConvergedReason) cdef extern from "libpetsc4py.h": PetscKSPType KSPPYTHON int KSPPythonSetContext(PetscKSP,void*) int KSPPythonGetContext(PetscKSP,void**) int KSPPythonSetType(PetscKSP,char[]) # ----------------------------------------------------------------------------- cdef inline KSP ref_KSP(PetscKSP ksp): cdef KSP ob = KSP() ob.ksp = ksp PetscINCREF(ob.obj) return ob # ----------------------------------------------------------------------------- cdef int KSP_Converged( PetscKSP ksp, PetscInt its, PetscReal rnm, PetscKSPConvergedReason *r, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef KSP Ksp = ref_KSP(ksp) (converged, args, kargs) = Ksp.get_attr('__converged__') reason = converged(Ksp, toInt(its), toReal(rnm), *args, **kargs) if reason is None: r[0] = KSP_CONVERGED_ITERATING elif reason is False: r[0] = KSP_CONVERGED_ITERATING elif reason is True: r[0] = KSP_CONVERGED_ITS # XXX ? else: r[0] = reason return 0 # ----------------------------------------------------------------------------- cdef int KSP_Monitor( PetscKSP ksp, PetscInt its, PetscReal rnm, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef KSP Ksp = ref_KSP(ksp) cdef object monitorlist = Ksp.get_attr('__monitor__') if monitorlist is None: return 0 for (monitor, args, kargs) in monitorlist: monitor(Ksp, toInt(its), toReal(rnm), *args, **kargs) return 0 # ----------------------------------------------------------------------------- cdef int KSP_ComputeRHS( PetscKSP ksp, PetscVec rhs, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef KSP Ksp = ref_KSP(ksp) cdef Vec Rhs = ref_Vec(rhs) cdef object context = Ksp.get_attr('__rhs__') if context is None and ctx != NULL: context = ctx assert context is not None and type(context) is tuple # sanity check (computerhs, args, kargs) = context computerhs(Ksp, Rhs, *args, **kargs) return 0 cdef int KSP_ComputeOps( PetscKSP ksp, PetscMat A, PetscMat B, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef KSP Ksp = ref_KSP(ksp) cdef Mat Amat = ref_Mat(A) cdef Mat Bmat = ref_Mat(B) cdef object context = Ksp.get_attr('__operators__') if context is None and ctx != NULL: context = ctx assert context is not None and type(context) is tuple # sanity check (computeops, args, kargs) = context computeops(Ksp, Amat, Bmat, *args, **kargs) return 0 # ----------------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/Sys.pyx0000644000175000001440000001451612711377604017125 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef class Sys: @classmethod def getVersion(cls, patch=False, devel=False, date=False, author=False): cdef int cmajor = PETSC_VERSION_MAJOR cdef int cminor = PETSC_VERSION_MINOR cdef int cmicro = PETSC_VERSION_SUBMINOR cdef int cpatch = PETSC_VERSION_PATCH cdef int cdevel = not PETSC_VERSION_RELEASE cdef const_char *cdate = PETSC_VERSION_DATE cdef const_char *cauthorinfo = PETSC_AUTHOR_INFO version = (cmajor, cminor, cmicro) out = version if patch or devel or date or author: out = [version] if patch: out.append(cpatch) if devel: out.append(cdevel) if date: date = bytes2str(cdate) out.append(date) if author: author = bytes2str(cauthorinfo).split('\n') author = [s.strip() for s in author if s] out.append(author) return tuple(out) @classmethod def getVersionInfo(cls): cdef int cmajor = PETSC_VERSION_MAJOR cdef int cminor = PETSC_VERSION_MINOR cdef int cmicro = PETSC_VERSION_SUBMINOR cdef int cpatch = PETSC_VERSION_PATCH cdef int crelease = PETSC_VERSION_RELEASE cdef const_char *cdate = PETSC_VERSION_DATE cdef const_char *cauthorinfo = PETSC_AUTHOR_INFO author = bytes2str(cauthorinfo).split('\n') author = [s.strip() for s in author if s] return dict(major = cmajor, minor = cminor, subminor = cmicro, patch = cpatch, release = crelease, date = bytes2str(cdate), authorinfo = author) # --- xxx --- @classmethod def isInitialized(cls): return PetscInitializeCalled @classmethod def isFinalized(cls): return PetscFinalizeCalled # --- xxx --- @classmethod def getDefaultComm(cls): cdef Comm comm = Comm() comm.comm = PETSC_COMM_DEFAULT return comm @classmethod def setDefaultComm(cls, comm): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_WORLD) if ccomm == MPI_COMM_NULL: raise ValueError("null communicator") global PETSC_COMM_DEFAULT PETSC_COMM_DEFAULT = ccomm # --- xxx --- @classmethod def Print(cls, *args, **kargs): cdef object comm = kargs.get('comm', None) cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef object sep = kargs.get('sep', ' ') cdef object end = kargs.get('end', '\n') if comm_rank(ccomm) == 0: if not args: args = ('',) format = ['%s', sep] * len(args) format[-1] = end message = ''.join(format) % args else: message = '' cdef const_char *m = NULL message = str2bytes(message, &m) CHKERR( PetscPrintf(ccomm, m) ) @classmethod def syncPrint(cls, *args, **kargs): cdef object comm = kargs.get('comm', None) cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef object sep = kargs.get('sep', ' ') cdef object end = kargs.get('end', '\n') cdef object flush = kargs.get('flush', False) if not args: args = ('',) format = ['%s', sep] * len(args) format[-1] = end message = ''.join(format) % args cdef const_char *m = NULL message = str2bytes(message, &m) CHKERR( PetscSynchronizedPrintf(ccomm, m) ) if flush: CHKERR( PetscSynchronizedFlush(ccomm, PETSC_STDOUT) ) @classmethod def syncFlush(cls, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) CHKERR( PetscSynchronizedFlush(ccomm, PETSC_STDOUT) ) # --- xxx --- @classmethod def splitOwnership(cls, size, bsize=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscInt bs=0, n=0, N=0 Sys_Sizes(size, bsize, &bs, &n, &N) if bs == PETSC_DECIDE: bs = 1 if n > 0: n = n // bs if N > 0: N = N // bs CHKERR( PetscSplitOwnership(ccomm, &n, &N) ) n = n * bs N = N * bs return (toInt(n), toInt(N)) @classmethod def sleep(cls, seconds=1): cdef int s = seconds CHKERR( PetscSleep(s) ) # --- xxx --- @classmethod def pushErrorHandler(cls, errhandler): cdef PetscErrorHandlerFunction handler = NULL if errhandler == "python": handler = \ PetscPythonErrorHandler elif errhandler == "debugger": handler = PetscAttachDebuggerErrorHandler elif errhandler == "emacs": handler = PetscEmacsClientErrorHandler elif errhandler == "traceback": handler = PetscTraceBackErrorHandler elif errhandler == "ignore": handler = PetscIgnoreErrorHandler elif errhandler == "mpiabort": handler = PetscMPIAbortErrorHandler elif errhandler == "abort": handler = PetscAbortErrorHandler else: raise ValueError( "unknown error handler: %s" % errhandler) CHKERR( PetscPushErrorHandler(handler, NULL) ) @classmethod def popErrorHandler(cls): CHKERR( PetscPopErrorHandler() ) @classmethod def infoAllow(cls, flag): cdef PetscBool tval = PETSC_FALSE if flag: tval = PETSC_TRUE CHKERR( PetscInfoAllow(tval, NULL) ) @classmethod def registerCitation(cls, citation): if not citation: raise ValueError("empty citation") cdef const_char *cit = NULL citation = str2bytes(citation, &cit) cdef PetscBool set = get_citation(citation) CHKERR( PetscCitationsRegister(cit, &set) ) set_citation(citation, set) cdef dict citations_registry = { } cdef PetscBool get_citation(object citation): cdef bint is_set = citations_registry.get(citation) return PETSC_TRUE if is_set else PETSC_FALSE cdef set_citation(object citation, bint is_set): citations_registry[citation] = is_set # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/Random.pyx0000644000175000001440000000554012711377604017564 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class RandomType(object): RAND = S_(PETSCRAND) RAND48 = S_(PETSCRAND48) SPRNG = S_(PETSCSPRNG) RANDER48 = S_(PETSCRANDER48) # -------------------------------------------------------------------- cdef class Random(Object): Type = RandomType def __cinit__(self): self.obj = &self.rnd self.rnd = NULL def __call__(self): return self.getValue() def view(self, Viewer viewer=None): assert self.obj != NULL cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( PetscRandomView(self.rnd, vwr) ) def destroy(self): CHKERR( PetscRandomDestroy(&self.rnd) ) return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) CHKERR( PetscRandomCreate(ccomm, &self.rnd) ) return self def setType(self, rnd_type): cdef const_char *cval = NULL rnd_type = str2bytes(rnd_type, &cval) CHKERR( PetscRandomSetType(self.rnd, cval) ) def getType(self): cdef PetscRandomType cval = NULL CHKERR( PetscRandomGetType(self.rnd, &cval) ) return bytes2str(cval) def setFromOptions(self): CHKERR( PetscRandomSetFromOptions(self.rnd) ) def getValue(self): cdef PetscScalar sval = 0 CHKERR( PetscRandomGetValue(self.rnd, &sval) ) return toScalar(sval) def getValueReal(self): cdef PetscReal rval = 0 CHKERR( PetscRandomGetValueReal(self.rnd, &rval) ) return toReal(rval) def getSeed(self): cdef unsigned long seed = 0 CHKERR( PetscRandomGetSeed(self.rnd, &seed) ) return seed def setSeed(self, seed=None): if seed is not None: CHKERR( PetscRandomSetSeed(self.rnd, seed) ) CHKERR( PetscRandomSeed(self.rnd) ) def getInterval(self): cdef PetscScalar sval1 = 0 cdef PetscScalar sval2 = 1 CHKERR( PetscRandomGetInterval(self.rnd, &sval1, &sval2) ) return (toScalar(sval1), toScalar(sval2)) def setInterval(self, interval): cdef PetscScalar sval1 = 0 cdef PetscScalar sval2 = 1 low, high = interval sval1 = asScalar(low) sval2 = asScalar(high) CHKERR( PetscRandomSetInterval(self.rnd, sval1, sval2) ) # property seed: def __get__(self): return self.getSeed() def __set__(self, value): self.setSeed(value) property interval: def __get__(self): return self.getInterval() def __set__(self, value): self.setInterval(value) # -------------------------------------------------------------------- del RandomType # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/KSP.pyx0000644000175000001440000005135512711377604017006 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class KSPType(object): RICHARDSON = S_(KSPRICHARDSON) CHEBYSHEV = S_(KSPCHEBYSHEV) CG = S_(KSPCG) GROPPCG = S_(KSPGROPPCG) PIPECG = S_(KSPPIPECG) PIPECGRR = S_(KSPPIPECGRR) CGNE = S_(KSPCGNE) NASH = S_(KSPNASH) STCG = S_(KSPSTCG) GLTR = S_(KSPGLTR) FCG = S_(KSPFCG) PIPEFCG = S_(KSPPIPEFCG) GMRES = S_(KSPGMRES) PIPEFGMRES = S_(KSPPIPEFGMRES) FGMRES = S_(KSPFGMRES) LGMRES = S_(KSPLGMRES) DGMRES = S_(KSPDGMRES) PGMRES = S_(KSPPGMRES) TCQMR = S_(KSPTCQMR) BCGS = S_(KSPBCGS) IBCGS = S_(KSPIBCGS) FBCGS = S_(KSPFBCGS) FBCGSR = S_(KSPFBCGSR) BCGSL = S_(KSPBCGSL) CGS = S_(KSPCGS) TFQMR = S_(KSPTFQMR) CR = S_(KSPCR) PIPECR = S_(KSPPIPECR) LSQR = S_(KSPLSQR) PREONLY = S_(KSPPREONLY) QCG = S_(KSPQCG) BICG = S_(KSPBICG) MINRES = S_(KSPMINRES) SYMMLQ = S_(KSPSYMMLQ) LCD = S_(KSPLCD) PYTHON = S_(KSPPYTHON) GCR = S_(KSPGCR) PIPEGCR = S_(KSPPIPEGCR) TSIRM = S_(KSPTSIRM) CGLS = S_(KSPCGLS) class KSPNormType(object): # native NORM_DEFAULT = KSP_NORM_DEFAULT NORM_NONE = KSP_NORM_NONE NORM_PRECONDITIONED = KSP_NORM_PRECONDITIONED NORM_UNPRECONDITIONED = KSP_NORM_UNPRECONDITIONED NORM_NATURAL = KSP_NORM_NATURAL # aliases DEFAULT = NORM_DEFAULT NONE = NO = NORM_NONE PRECONDITIONED = NORM_PRECONDITIONED UNPRECONDITIONED = NORM_UNPRECONDITIONED NATURAL = NORM_NATURAL class KSPConvergedReason(object): #iterating CONVERGED_ITERATING = KSP_CONVERGED_ITERATING ITERATING = KSP_CONVERGED_ITERATING # converged CONVERGED_RTOL_NORMAL = KSP_CONVERGED_RTOL_NORMAL CONVERGED_ATOL_NORMAL = KSP_CONVERGED_ATOL_NORMAL CONVERGED_RTOL = KSP_CONVERGED_RTOL CONVERGED_ATOL = KSP_CONVERGED_ATOL CONVERGED_ITS = KSP_CONVERGED_ITS CONVERGED_CG_NEG_CURVE = KSP_CONVERGED_CG_NEG_CURVE CONVERGED_CG_CONSTRAINED = KSP_CONVERGED_CG_CONSTRAINED CONVERGED_STEP_LENGTH = KSP_CONVERGED_STEP_LENGTH CONVERGED_HAPPY_BREAKDOWN = KSP_CONVERGED_HAPPY_BREAKDOWN # diverged DIVERGED_NULL = KSP_DIVERGED_NULL DIVERGED_MAX_IT = KSP_DIVERGED_MAX_IT DIVERGED_DTOL = KSP_DIVERGED_DTOL DIVERGED_BREAKDOWN = KSP_DIVERGED_BREAKDOWN DIVERGED_BREAKDOWN_BICG = KSP_DIVERGED_BREAKDOWN_BICG DIVERGED_NONSYMMETRIC = KSP_DIVERGED_NONSYMMETRIC DIVERGED_INDEFINITE_PC = KSP_DIVERGED_INDEFINITE_PC DIVERGED_NANORINF = KSP_DIVERGED_NANORINF DIVERGED_INDEFINITE_MAT = KSP_DIVERGED_INDEFINITE_MAT # -------------------------------------------------------------------- cdef class KSP(Object): Type = KSPType NormType = KSPNormType ConvergedReason = KSPConvergedReason # --- xxx --- def __cinit__(self): self.obj = &self.ksp self.ksp = NULL def __call__(self, b, x=None): if x is None: # XXX do this better x = self.getOperators()[0].createVecLeft() self.solve(b, x) return x # --- xxx --- def view(self, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( KSPView(self.ksp, vwr) ) def destroy(self): CHKERR( KSPDestroy(&self.ksp) ) return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscKSP newksp = NULL CHKERR( KSPCreate(ccomm, &newksp) ) PetscCLEAR(self.obj); self.ksp = newksp return self def setType(self, ksp_type): cdef const_char *cval = NULL ksp_type = str2bytes(ksp_type, &cval) CHKERR( KSPSetType(self.ksp, cval) ) def getType(self): cdef const_char *cval = NULL CHKERR( KSPGetType(self.ksp, &cval) ) return bytes2str(cval) def setOptionsPrefix(self, prefix): cdef const_char *cval = NULL prefix = str2bytes(prefix, &cval) CHKERR( KSPSetOptionsPrefix(self.ksp, cval) ) def getOptionsPrefix(self): cdef const_char *cval = NULL CHKERR( KSPGetOptionsPrefix(self.ksp, &cval) ) return bytes2str(cval) def setFromOptions(self): CHKERR( KSPSetFromOptions(self.ksp) ) # --- application context --- def setAppCtx(self, appctx): self.set_attr('__appctx__', appctx) def getAppCtx(self): return self.get_attr('__appctx__') # --- discretization space --- def getDM(self): cdef PetscDM newdm = NULL CHKERR( KSPGetDM(self.ksp, &newdm) ) cdef DM dm = subtype_DM(newdm)() dm.dm = newdm PetscINCREF(dm.obj) return dm def setDM(self, DM dm not None): CHKERR( KSPSetDM(self.ksp, dm.dm) ) def setDMActive(self, bint flag): cdef PetscBool cflag = PETSC_FALSE if flag: cflag = PETSC_TRUE CHKERR( KSPSetDMActive(self.ksp, cflag) ) # --- operators and preconditioner --- def setComputeRHS(self, rhs, args=None, kargs=None): if args is None: args = () if kargs is None: kargs = {} context = (rhs, args, kargs) self.set_attr('__rhs__', context) CHKERR( KSPSetComputeRHS(self.ksp, KSP_ComputeRHS, context) ) def setComputeOperators(self, operators, args=None, kargs=None): if args is None: args = () if kargs is None: kargs = {} context = (operators, args, kargs) self.set_attr('__operators__', context) CHKERR( KSPSetComputeOperators(self.ksp, KSP_ComputeOps, context) ) def setOperators(self, Mat A=None, Mat P=None): cdef PetscMat amat=NULL if A is not None: amat = A.mat cdef PetscMat pmat=amat if P is not None: pmat = P.mat CHKERR( KSPSetOperators(self.ksp, amat, pmat) ) def getOperators(self): cdef Mat A = Mat(), P = Mat() CHKERR( KSPGetOperators(self.ksp, &A.mat, &P.mat) ) PetscINCREF(A.obj) PetscINCREF(P.obj) return (A, P) def setPC(self, PC pc not None): CHKERR( KSPSetPC(self.ksp, pc.pc) ) def getPC(self): cdef PC pc = PC() CHKERR( KSPGetPC(self.ksp, &pc.pc) ) PetscINCREF(pc.obj) return pc # --- tolerances and convergence --- def setTolerances(self, rtol=None, atol=None, divtol=None, max_it=None): cdef PetscReal crtol, catol, cdivtol crtol = catol = cdivtol = PETSC_DEFAULT; if rtol is not None: crtol = asReal(rtol) if atol is not None: catol = asReal(atol) if divtol is not None: cdivtol = asReal(divtol) cdef PetscInt cmaxits = PETSC_DEFAULT if max_it is not None: cmaxits = asInt(max_it) CHKERR( KSPSetTolerances(self.ksp, crtol, catol, cdivtol, cmaxits) ) def getTolerances(self): cdef PetscReal crtol=0, catol=0, cdivtol=0 cdef PetscInt cmaxits=0 CHKERR( KSPGetTolerances(self.ksp, &crtol, &catol, &cdivtol, &cmaxits) ) return (toReal(crtol), toReal(catol), toReal(cdivtol), toInt(cmaxits)) def setConvergenceTest(self, converged, args=None, kargs=None): cdef PetscKSPNormType normtype = KSP_NORM_NONE cdef void* cctx = NULL if converged is not None: CHKERR( KSPSetConvergenceTest( self.ksp, KSP_Converged, NULL, NULL) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr('__converged__', (converged, args, kargs)) else: CHKERR( KSPGetNormType(self.ksp, &normtype) ) if normtype != KSP_NORM_NONE: CHKERR( KSPConvergedDefaultCreate(&cctx) ) CHKERR( KSPSetConvergenceTest( self.ksp, KSPConvergedDefault, cctx, KSPConvergedDefaultDestroy) ) else: CHKERR( KSPSetConvergenceTest( self.ksp, KSPConvergedSkip, NULL, NULL) ) self.set_attr('__converged__', None) def getConvergenceTest(self): return self.get_attr('__converged__') def callConvergenceTest(self, its, rnorm): cdef PetscInt ival = asInt(its) cdef PetscReal rval = asReal(rnorm) cdef PetscKSPConvergedReason reason = KSP_CONVERGED_ITERATING CHKERR( KSPConvergenceTestCall(self.ksp, ival, rval, &reason) ) return reason def setConvergenceHistory(self, length=None, reset=False): cdef PetscReal *data = NULL cdef PetscInt size = 10000 cdef PetscBool flag = PETSC_FALSE if length is True: pass elif length is not None: size = asInt(length) if size < 0: size = 10000 if reset: flag = PETSC_TRUE cdef object hist = oarray_r(empty_r(size), NULL, &data) self.set_attr('__history__', hist) CHKERR( KSPSetResidualHistory(self.ksp, data, size, flag) ) def getConvergenceHistory(self): cdef PetscReal *data = NULL cdef PetscInt size = 0 CHKERR( KSPGetResidualHistory(self.ksp, &data, &size) ) return array_r(size, data) def logConvergenceHistory(self, rnorm): cdef PetscReal rval = asReal(rnorm) CHKERR( KSPLogResidualHistory(self.ksp, rval) ) # --- monitoring --- def setMonitor(self, monitor, args=None, kargs=None): if monitor is None: return cdef object monitorlist = self.get_attr('__monitor__') if monitorlist is None: monitorlist = [] self.set_attr('__monitor__', monitorlist) CHKERR( KSPMonitorSet(self.ksp, KSP_Monitor, NULL, NULL) ) if args is None: args = () if kargs is None: kargs = {} monitorlist.append((monitor, args, kargs)) def getMonitor(self): return self.get_attr('__monitor__') def cancelMonitor(self): CHKERR( KSPMonitorCancel(self.ksp) ) self.set_attr('__monitor__', None) def monitor(self, its, rnorm): cdef PetscInt ival = asInt(its) cdef PetscReal rval = asReal(rnorm) CHKERR( KSPMonitor(self.ksp, ival, rval) ) # --- customization --- def setPCSide(self, side): CHKERR( KSPSetPCSide(self.ksp, side) ) def getPCSide(self): cdef PetscPCSide side = PC_LEFT CHKERR( KSPGetPCSide(self.ksp, &side) ) return side def setNormType(self, normtype): CHKERR( KSPSetNormType(self.ksp, normtype) ) def getNormType(self): cdef PetscKSPNormType normtype = KSP_NORM_NONE CHKERR( KSPGetNormType(self.ksp, &normtype) ) return normtype def setComputeEigenvalues(self, bint flag): cdef PetscBool compute = PETSC_FALSE if flag: compute = PETSC_TRUE CHKERR( KSPSetComputeEigenvalues(self.ksp, compute) ) def getComputeEigenvalues(self): cdef PetscBool compute = PETSC_FALSE CHKERR( KSPGetComputeEigenvalues(self.ksp, &compute) ) return compute def setComputeSingularValues(self, bint flag): cdef PetscBool compute = PETSC_FALSE if flag: compute = PETSC_TRUE CHKERR( KSPSetComputeSingularValues(self.ksp, compute) ) def getComputeSingularValues(self): cdef PetscBool compute = PETSC_FALSE CHKERR( KSPGetComputeSingularValues(self.ksp, &compute) ) return compute # --- initial guess --- def setInitialGuessNonzero(self, bint flag): cdef PetscBool guess_nonzero = PETSC_FALSE if flag: guess_nonzero = PETSC_TRUE CHKERR( KSPSetInitialGuessNonzero(self.ksp, guess_nonzero) ) def getInitialGuessNonzero(self): cdef PetscBool guess_nonzero = PETSC_FALSE CHKERR( KSPGetInitialGuessNonzero(self.ksp, &guess_nonzero) ) return guess_nonzero def setInitialGuessKnoll(self, bint flag): cdef PetscBool guess_knoll = PETSC_FALSE if flag: guess_knoll = PETSC_TRUE CHKERR( KSPSetInitialGuessKnoll(self.ksp, guess_knoll) ) def getInitialGuessKnoll(self): cdef PetscBool guess_knoll = PETSC_FALSE CHKERR( KSPGetInitialGuessKnoll(self.ksp, &guess_knoll) ) return guess_knoll def setUseFischerGuess(self, model, size): cdef PetscInt ival1 = asInt(model) cdef PetscInt ival2 = asInt(size) CHKERR( KSPSetUseFischerGuess(self.ksp, ival1, ival2) ) # --- solving --- def setUp(self): CHKERR( KSPSetUp(self.ksp) ) def reset(self): CHKERR( KSPReset(self.ksp) ) def setUpOnBlocks(self): CHKERR( KSPSetUpOnBlocks(self.ksp) ) def solve(self, Vec b not None, Vec x not None): CHKERR( KSPSolve(self.ksp, b.vec, x.vec) ) def solveTranspose(self, Vec b not None, Vec x not None): CHKERR( KSPSolveTranspose(self.ksp, b.vec, x.vec) ) def setIterationNumber(self, its): cdef PetscInt ival = asInt(its) CHKERR( KSPSetIterationNumber(self.ksp, ival) ) def getIterationNumber(self): cdef PetscInt ival = 0 CHKERR( KSPGetIterationNumber(self.ksp, &ival) ) return toInt(ival) def setResidualNorm(self, rnorm): cdef PetscReal rval = asReal(rnorm) CHKERR( KSPSetResidualNorm(self.ksp, rval) ) def getResidualNorm(self): cdef PetscReal rval = 0 CHKERR( KSPGetResidualNorm(self.ksp, &rval) ) return toReal(rval) def setConvergedReason(self, reason): cdef PetscKSPConvergedReason val = reason CHKERR( KSPSetConvergedReason(self.ksp, val) ) def getConvergedReason(self): cdef PetscKSPConvergedReason reason = KSP_CONVERGED_ITERATING CHKERR( KSPGetConvergedReason(self.ksp, &reason) ) return reason def getRhs(self): cdef Vec vec = Vec() CHKERR( KSPGetRhs(self.ksp, &vec.vec) ) PetscINCREF(vec.obj) return vec def getSolution(self): cdef Vec vec = Vec() CHKERR( KSPGetSolution(self.ksp, &vec.vec) ) PetscINCREF(vec.obj) return vec def getWorkVecs(self, right=None, left=None): cdef bint R = right is not None cdef bint L = left is not None cdef PetscInt i=0, nr=0, nl=0 cdef PetscVec *vr=NULL, *vl=NULL if R: nr = asInt(right) if L: nl = asInt(left) cdef object vecsr = [] if R else None cdef object vecsl = [] if L else None CHKERR( KSPCreateVecs(self.ksp, nr, &vr, nl, &vr) ) try: for i from 0 <= i < nr: vecsr.append(ref_Vec(vr[i])) for i from 0 <= i < nl: vecsl.append(ref_Vec(vl[i])) finally: if nr > 0 and vr != NULL: VecDestroyVecs(nr, &vr) # XXX errors? if nl > 0 and vl !=NULL: VecDestroyVecs(nl, &vl) # XXX errors? # if R and L: return (vecsr, vecsl) elif R: return vecsr elif L: return vecsl else: return None def buildSolution(self, Vec x=None): if x is None: x = Vec() if x.vec == NULL: CHKERR( KSPGetSolution(self.ksp, &x.vec) ) CHKERR( VecDuplicate(x.vec, &x.vec) ) CHKERR( KSPBuildSolution(self.ksp, x.vec, NULL) ) return x def buildResidual(self, Vec r=None): if r is None: r = Vec() if r.vec == NULL: CHKERR( KSPGetRhs(self.ksp, &r.vec) ) CHKERR( VecDuplicate(r.vec, &r.vec) ) CHKERR( KSPBuildResidual(self.ksp , NULL, r.vec, &r.vec) ) return r def computeEigenvalues(self): cdef PetscInt its = 0 cdef PetscInt neig = 0 cdef PetscReal *rdata = NULL cdef PetscReal *idata = NULL CHKERR( KSPGetIterationNumber(self.ksp, &its) ) cdef ndarray r = oarray_r(empty_r(its), NULL, &rdata) cdef ndarray i = oarray_r(empty_r(its), NULL, &idata) CHKERR( KSPComputeEigenvalues(self.ksp, its, rdata, idata, &neig) ) eigen = empty_c(neig) eigen.real = r[:neig] eigen.imag = i[:neig] return eigen def computeExtremeSingularValues(self): cdef PetscReal smax = 0 cdef PetscReal smin = 0 CHKERR( KSPComputeExtremeSingularValues(self.ksp, &smax, &smin) ) return smax, smin # --- GMRES --- def setGMRESRestart(self, restart): cdef PetscInt ival = asInt(restart) CHKERR( KSPGMRESSetRestart(self.ksp, ival) ) # --- Python --- def createPython(self, context=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscKSP newksp = NULL CHKERR( KSPCreate(ccomm, &newksp) ) PetscCLEAR(self.obj); self.ksp = newksp CHKERR( KSPSetType(self.ksp, KSPPYTHON) ) CHKERR( KSPPythonSetContext(self.ksp, context) ) return self def setPythonContext(self, context): CHKERR( KSPPythonSetContext(self.ksp, context) ) def getPythonContext(self): cdef void *context = NULL CHKERR( KSPPythonGetContext(self.ksp, &context) ) if context == NULL: return None else: return context def setPythonType(self, py_type): cdef const_char *cval = NULL py_type = str2bytes(py_type, &cval) CHKERR( KSPPythonSetType(self.ksp, cval) ) # --- application context --- property appctx: def __get__(self): return self.getAppCtx() def __set__(self, value): self.setAppCtx(value) # --- discretization space --- property dm: def __get__(self): return self.getDM() def __set__(self, value): self.setDM(value) # --- vectors --- property vec_sol: def __get__(self): return self.getSolution() property vec_rhs: def __get__(self): return self.getRhs() # --- operators --- property mat_op: def __get__(self): return self.getOperators()[0] property mat_pc: def __get__(self): return self.getOperators()[1] # --- initial guess --- property guess_nonzero: def __get__(self): return self.getInitialGuessNonzero() def __set__(self, value): self.setInitialGuessNonzero(value) property guess_knoll: def __get__(self): return self.getInitialGuessKnoll() def __set__(self, value): self.setInitialGuessKnoll(value) # --- preconditioner --- property pc: def __get__(self): return self.getPC() property pc_side: def __get__(self): return self.getPCSide() def __set__(self, value): self.setPCSide(value) property norm_type: def __get__(self): return self.getNormType() def __set__(self, value): self.setNormType(value) # --- tolerances --- property rtol: def __get__(self): return self.getTolerances()[0] def __set__(self, value): self.setTolerances(rtol=value) property atol: def __get__(self): return self.getTolerances()[1] def __set__(self, value): self.setTolerances(atol=value) property divtol: def __get__(self): return self.getTolerances()[2] def __set__(self, value): self.setTolerances(divtol=value) property max_it: def __get__(self): return self.getTolerances()[3] def __set__(self, value): self.setTolerances(max_it=value) # --- iteration --- property its: def __get__(self): return self.getIterationNumber() def __set__(self, value): self.setIterationNumber(value) property norm: def __get__(self): return self.getResidualNorm() def __set__(self, value): self.setResidualNorm(value) property history: def __get__(self): return self.getConvergenceHistory() # --- convergence --- property reason: def __get__(self): return self.getConvergedReason() def __set__(self, value): self.setConvergedReason(value) property iterating: def __get__(self): return self.reason == 0 property converged: def __get__(self): return self.reason > 0 property diverged: def __get__(self): return self.reason < 0 # -------------------------------------------------------------------- del KSPType del KSPNormType del KSPConvergedReason # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscvec.pxi0000644000175000001440000004515412711377604020145 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from * nogil: ctypedef char* PetscVecType "const char*" PetscVecType VECSEQ PetscVecType VECMPI PetscVecType VECSTANDARD PetscVecType VECSHARED PetscVecType VECSEQCUSP PetscVecType VECMPICUSP PetscVecType VECCUSP PetscVecType VECNEST PetscVecType VECSEQVIENNACL PetscVecType VECMPIVIENNACL PetscVecType VECVIENNACL PetscVecType VECSEQCUDA PetscVecType VECMPICUDA PetscVecType VECCUDA ctypedef enum PetscVecOption "VecOption": VEC_IGNORE_OFF_PROC_ENTRIES VEC_IGNORE_NEGATIVE_INDICES int VecView(PetscVec,PetscViewer) int VecDestroy(PetscVec*) int VecCreate(MPI_Comm,PetscVec*) int VecSetOptionsPrefix(PetscVec,char[]) int VecGetOptionsPrefix(PetscVec,char*[]) int VecSetFromOptions(PetscVec) int VecSetUp(PetscVec) int VecCreateSeq(MPI_Comm,PetscInt,PetscVec*) int VecCreateSeqWithArray(MPI_Comm,PetscInt,PetscInt,PetscScalar[],PetscVec*) int VecCreateMPI(MPI_Comm,PetscInt,PetscInt,PetscVec*) int VecCreateMPIWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscScalar[],PetscVec*) int VecCreateGhost(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt[],PetscVec*) int VecCreateGhostWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt[],PetscScalar[],PetscVec*) int VecCreateGhostBlock(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt[],PetscVec*) int VecCreateGhostBlockWithArray(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt[],PetscScalar[],PetscVec*) int VecCreateShared(MPI_Comm,PetscInt,PetscInt,PetscVec*) int VecCreateNest(MPI_Comm,PetscInt,PetscIS[],PetscVec[],PetscVec*) int VecGetType(PetscVec,PetscVecType*) int VecSetType(PetscVec,PetscVecType) int VecSetOption(PetscVec,PetscVecOption,PetscBool) int VecSetSizes(PetscVec,PetscInt,PetscInt) int VecGetSize(PetscVec,PetscInt*) int VecGetLocalSize(PetscVec,PetscInt*) int VecSetBlockSize(PetscVec,PetscInt) int VecGetBlockSize(PetscVec,PetscInt*) int VecGetOwnershipRange(PetscVec,PetscInt*,PetscInt*) int VecGetOwnershipRanges(PetscVec,const_PetscInt*[]) int VecGetArrayRead(PetscVec,const_PetscScalar*[]) int VecRestoreArrayRead(PetscVec,const_PetscScalar*[]) int VecGetArray(PetscVec,PetscScalar*[]) int VecRestoreArray(PetscVec,PetscScalar*[]) int VecPlaceArray(PetscVec,PetscScalar[]) int VecResetArray(PetscVec) int VecEqual(PetscVec,PetscVec,PetscBool*) int VecLoad(PetscVec,PetscViewer) int VecDuplicate(PetscVec,PetscVec*) int VecCopy(PetscVec,PetscVec) int VecChop(PetscVec,PetscReal) int VecDuplicateVecs(PetscVec,PetscInt,PetscVec*[]) int VecDestroyVecs(PetscInt,PetscVec*[]) int VecGetValues(PetscVec,PetscInt,PetscInt[],PetscScalar[]) int VecSetValue(PetscVec,PetscInt,PetscScalar,PetscInsertMode) int VecSetValues(PetscVec,PetscInt,PetscInt[],PetscScalar[],PetscInsertMode) int VecSetValuesBlocked(PetscVec,PetscInt,PetscInt[],PetscScalar[],PetscInsertMode) int VecSetLocalToGlobalMapping(PetscVec,PetscLGMap) int VecSetValueLocal(PetscVec,PetscInt,PetscScalar,PetscInsertMode) int VecSetValuesLocal(PetscVec,PetscInt,PetscInt[],PetscScalar[],PetscInsertMode) int VecSetValuesBlockedLocal(PetscVec,PetscInt,PetscInt[],PetscScalar[],PetscInsertMode) int VecDot(PetscVec,PetscVec,PetscScalar*) int VecDotBegin(PetscVec,PetscVec,PetscScalar*) int VecDotEnd(PetscVec,PetscVec,PetscScalar*) int VecTDot(PetscVec,PetscVec,PetscScalar*) int VecTDotBegin(PetscVec,PetscVec,PetscScalar*) int VecTDotEnd(PetscVec,PetscVec,PetscScalar*) int VecMDot(PetscVec,PetscInt,PetscVec[],PetscScalar*) int VecMDotBegin(PetscVec,PetscInt,PetscVec[],PetscScalar*) int VecMDotEnd(PetscVec,PetscInt,PetscVec[],PetscScalar*) int VecMTDot(PetscVec,PetscInt,PetscVec[],PetscScalar*) int VecMTDotBegin(PetscVec,PetscInt,PetscVec[],PetscScalar*) int VecMTDotEnd(PetscVec,PetscInt,PetscVec[],PetscScalar*) int VecNorm(PetscVec,PetscNormType,PetscReal*) int VecNormBegin(PetscVec,PetscNormType,PetscReal*) int VecNormEnd(PetscVec,PetscNormType,PetscReal*) int VecAssemblyBegin(PetscVec) int VecAssemblyEnd(PetscVec) int VecZeroEntries(PetscVec) int VecConjugate(PetscVec) int VecNormalize(PetscVec,PetscReal*) int VecSum(PetscVec,PetscScalar*) int VecMax(PetscVec,PetscInt*,PetscReal*) int VecMin(PetscVec,PetscInt*,PetscReal*) int VecScale(PetscVec,PetscScalar) int VecCopy(PetscVec,PetscVec) int VecSetRandom(PetscVec,PetscRandom) int VecSet(PetscVec,PetscScalar) int VecSwap(PetscVec,PetscVec) int VecAXPY(PetscVec,PetscScalar,PetscVec) int VecAXPBY(PetscVec,PetscScalar,PetscScalar,PetscVec) int VecAYPX(PetscVec,PetscScalar,PetscVec) int VecWAXPY(PetscVec,PetscScalar,PetscVec,PetscVec) int VecMAXPY(PetscVec,PetscInt,PetscScalar[],PetscVec[]) int VecPointwiseMax(PetscVec,PetscVec,PetscVec) int VecPointwiseMaxAbs(PetscVec,PetscVec,PetscVec) int VecPointwiseMin(PetscVec,PetscVec,PetscVec) int VecPointwiseMult(PetscVec,PetscVec,PetscVec) int VecPointwiseDivide(PetscVec,PetscVec,PetscVec) int VecMaxPointwiseDivide(PetscVec,PetscVec,PetscReal*) int VecShift(PetscVec,PetscScalar) int VecChop(PetscVec,PetscReal) int VecReciprocal(PetscVec) int VecPermute(PetscVec,PetscIS,PetscBool) int VecExp(PetscVec) int VecLog(PetscVec) int VecSqrtAbs(PetscVec) int VecAbs(PetscVec) int VecStrideSum(PetscVec,PetscInt,PetscScalar*) int VecStrideMin(PetscVec,PetscInt,PetscInt*,PetscReal*) int VecStrideMax(PetscVec,PetscInt,PetscInt*,PetscReal*) int VecStrideScale(PetscVec,PetscInt,PetscScalar) int VecStrideGather(PetscVec,PetscInt,PetscVec,PetscInsertMode) int VecStrideScatter(PetscVec,PetscInt,PetscVec,PetscInsertMode) int VecStrideNorm(PetscVec,PetscInt,PetscNormType,PetscReal*) int VecGhostGetLocalForm(PetscVec,PetscVec*) int VecGhostRestoreLocalForm(PetscVec,PetscVec*) int VecGhostUpdateBegin(PetscVec,PetscInsertMode,PetscScatterMode) int VecGhostUpdateEnd(PetscVec,PetscInsertMode,PetscScatterMode) int VecMPISetGhost(PetscVec,PetscInt,const_PetscInt*) int VecGetSubVector(PetscVec,PetscIS,PetscVec*) int VecRestoreSubVector(PetscVec,PetscIS,PetscVec*) int VecNestGetSubVecs(PetscVec,PetscInt*,PetscVec**) int VecNestSetSubVecs(PetscVec,PetscInt,PetscInt*,PetscVec*) int VecISAXPY(PetscVec,PetscIS,PetscScalar,PetscVec) int VecISSet(PetscVec,PetscIS,PetscScalar) int VecCUSPGetCUDAArrayRead(PetscVec,PetscScalar*[]) int VecCUSPGetCUDAArrayWrite(PetscVec,PetscScalar*[]) int VecCUSPGetCUDAArrayReadWrite(PetscVec,PetscScalar*[]) int VecCUSPRestoreCUDAArrayRead(PetscVec,PetscScalar*[]) int VecCUSPRestoreCUDAArrayWrite(PetscVec,PetscScalar*[]) int VecCUSPRestoreCUDAArrayReadWrite(PetscVec,PetscScalar*[]) # -------------------------------------------------------------------- cdef inline Vec ref_Vec(PetscVec vec): cdef Vec ob = Vec() ob.vec = vec PetscINCREF(ob.obj) return ob # -------------------------------------------------------------------- # unary operations cdef Vec vec_pos(Vec self): cdef Vec vec = type(self)() CHKERR( VecDuplicate(self.vec, &vec.vec) ) CHKERR( VecCopy(self.vec, vec.vec) ) return vec cdef Vec vec_neg(Vec self): cdef Vec vec = vec_pos(self) CHKERR( VecScale(vec.vec, -1) ) return vec cdef Vec vec_abs(Vec self): cdef Vec vec = vec_pos(self) CHKERR( VecAbs(vec.vec) ) return vec # inplace binary operations cdef Vec vec_iadd(Vec self, other): cdef PetscScalar alpha = 1 cdef Vec vec if isinstance(other, Vec): alpha = 1; vec = other CHKERR( VecAXPY(self.vec, alpha, vec.vec) ) elif isinstance(other, tuple) or isinstance(other, list): other, vec = other alpha = asScalar(other) CHKERR( VecAXPY(self.vec, alpha, vec.vec) ) else: alpha = asScalar(other) CHKERR( VecShift(self.vec, alpha) ) return self cdef Vec vec_isub(Vec self, other): cdef PetscScalar alpha = 1 cdef Vec vec if isinstance(other, Vec): alpha = 1; vec = other CHKERR( VecAXPY(self.vec, -alpha, vec.vec) ) elif isinstance(other, tuple) or isinstance(other, list): other, vec = other alpha = asScalar(other) CHKERR( VecAXPY(self.vec, -alpha, vec.vec) ) else: alpha = asScalar(other) CHKERR( VecShift(self.vec, -alpha) ) return self cdef Vec vec_imul(Vec self, other): cdef PetscScalar alpha = 1 cdef Vec vec if isinstance(other, Vec): vec = other CHKERR( VecPointwiseMult(self.vec, self.vec, vec.vec) ) else: alpha = asScalar(other) CHKERR( VecScale(self.vec, alpha) ) return self cdef Vec vec_idiv(Vec self, other): cdef PetscScalar one = 1 cdef PetscScalar alpha = 1 cdef Vec vec if isinstance(other, Vec): vec = other CHKERR( VecPointwiseDivide(self.vec, self.vec, vec.vec) ) else: alpha = asScalar(other) CHKERR( VecScale(self.vec, one/alpha) ) return self # binary operations cdef Vec vec_add(Vec self, other): return vec_iadd(vec_pos(self), other) cdef Vec vec_sub(Vec self, other): return vec_isub(vec_pos(self), other) cdef Vec vec_mul(Vec self, other): return vec_imul(vec_pos(self), other) cdef Vec vec_div(Vec self, other): return vec_idiv(vec_pos(self), other) # reflected binary operations cdef Vec vec_radd(Vec self, other): return vec_add(self, other) cdef Vec vec_rsub(Vec self, other): cdef Vec vec = vec_sub(self, other) CHKERR( VecScale(vec.vec, -1) ) return vec cdef Vec vec_rmul(Vec self, other): return vec_mul(self, other) cdef Vec vec_rdiv(Vec self, other): cdef Vec vec = vec_div(self, other) CHKERR( VecReciprocal(vec.vec) ) return vec # -------------------------------------------------------------------- cdef inline int Vec_Sizes(object size, object bsize, PetscInt *b, PetscInt *n, PetscInt *N) except -1: Sys_Sizes(size, bsize, b, n, N) return 0 # -------------------------------------------------------------------- ctypedef int VecSetValuesFcn(PetscVec,PetscInt,const_PetscInt[], const_PetscScalar[],PetscInsertMode) cdef inline int vecsetvalues(PetscVec V, object oi, object ov, object oim, int blocked, int local) except -1: # block size cdef PetscInt bs=1 if blocked: CHKERR( VecGetBlockSize(V, &bs) ) if bs < 1: bs = 1 # indices and values cdef PetscInt ni=0, nv=0 cdef PetscInt *i=NULL cdef PetscScalar *v=NULL cdef object tmp1 = iarray_i(oi, &ni, &i) cdef object tmp2 = iarray_s(ov, &nv, &v) if ni*bs != nv: raise ValueError( "incompatible array sizes: ni=%d, nv=%d, bs=%d" % (toInt(ni), toInt(nv), toInt(bs)) ) # insert mode cdef PetscInsertMode addv = insertmode(oim) # VecSetValuesXXX function cdef VecSetValuesFcn *setvalues = NULL if blocked and local: setvalues = VecSetValuesBlockedLocal elif blocked: setvalues = VecSetValuesBlocked elif local: setvalues = VecSetValuesLocal else: setvalues = VecSetValues # actual call CHKERR( setvalues(V, ni, i, v, addv) ) return 0 cdef object vecgetvalues(PetscVec vec, object oindices, object values): cdef PetscInt ni=0, nv=0 cdef PetscInt *i=NULL cdef PetscScalar *v=NULL cdef object indices = iarray_i(oindices, &ni, &i) if values is None: values = empty_s(ni) values.shape = indices.shape values = oarray_s(values, &nv, &v) if (ni != nv): raise ValueError( ("incompatible array sizes: " "ni=%d, nv=%d") % (toInt(ni), toInt(nv))) CHKERR( VecGetValues(vec, ni, i, v) ) return values # -------------------------------------------------------------------- cdef inline _Vec_buffer vec_getbuffer_r(Vec self): cdef _Vec_buffer buf = _Vec_buffer(self) buf.readonly = 1 return buf cdef inline _Vec_buffer vec_getbuffer_w(Vec self): cdef _Vec_buffer buf = _Vec_buffer(self) buf.readonly = 0 return buf cdef inline ndarray vec_getarray_r(Vec self): return asarray(vec_getbuffer_r(self)) cdef inline ndarray vec_getarray_w(Vec self): return asarray(vec_getbuffer_w(self)) cdef inline int vec_setarray(Vec self, object o) except -1: cdef PetscInt na=0, nv=0, i=0 cdef PetscScalar *va=NULL, *vv=NULL cdef ndarray ary = iarray_s(o, &na, &va) CHKERR( VecGetLocalSize(self.vec, &nv) ) if (na != nv) and PyArray_NDIM(ary) > 0: raise ValueError( "array size %d incompatible with vector local size %d" % (toInt(na), toInt(nv)) ) CHKERR( VecGetArray(self.vec, &vv) ) try: if PyArray_NDIM(ary) == 0: for i from 0 <= i < nv: vv[i] = va[0] else: CHKERR( PetscMemcpy(vv, va, nv*sizeof(PetscScalar)) ) finally: CHKERR( VecRestoreArray(self.vec, &vv) ) return 0 cdef object vec_getitem(Vec self, object i): cdef PetscInt N=0 if i is Ellipsis: return asarray(self) if isinstance(i, slice): CHKERR( VecGetSize(self.vec, &N) ) start, stop, stride = i.indices(toInt(N)) i = arange(start, stop, stride) return vecgetvalues(self.vec, i, None) cdef int vec_setitem(Vec self, object i, object v) except -1: cdef PetscInt N=0 if i is Ellipsis: return vec_setarray(self, v) if isinstance(i, slice): CHKERR( VecGetSize(self.vec, &N) ) start, stop, stride = i.indices(toInt(N)) i = arange(start, stop, stride) vecsetvalues(self.vec, i, v, None, 0, 0) return 0 # -------------------------------------------------------------------- cdef extern from "pep3118.h": int PyPetscBuffer_FillInfo(Py_buffer*, void*,PetscInt,char, int,int) except -1 void PyPetscBuffer_Release(Py_buffer*) # -------------------------------------------------------------------- cdef int Vec_AcquireArray(PetscVec v, PetscScalar *a[], int ro) nogil except -1: if ro: CHKERR( VecGetArrayRead(v, a) ) else: CHKERR( VecGetArray(v, a) ) return 0 cdef int Vec_ReleaseArray(PetscVec v, PetscScalar *a[], int ro) nogil except -1: if ro: CHKERR( VecRestoreArrayRead(v, a) ) else: CHKERR( VecRestoreArray(v, a) ) return 0 cdef class _Vec_buffer: cdef PetscVec vec cdef PetscInt size cdef PetscScalar *data cdef bint readonly cdef bint hasarray def __cinit__(self, Vec vec not None, bint readonly=0): cdef PetscVec v = vec.vec CHKERR( PetscINCREF(&v) ) self.vec = v self.size = 0 self.data = NULL self.readonly = 1 if readonly else 0 self.hasarray = 0 def __dealloc__(self): if self.hasarray and self.vec != NULL: Vec_ReleaseArray(self.vec, &self.data, self.readonly) CHKERR( VecDestroy(&self.vec) ) # cdef int acquire(self) nogil except -1: if not self.hasarray and self.vec != NULL: CHKERR( VecGetLocalSize(self.vec, &self.size) ) Vec_AcquireArray(self.vec, &self.data, self.readonly) self.hasarray = 1 return 0 cdef int release(self) nogil except -1: if self.hasarray and self.vec != NULL: self.size = 0 Vec_ReleaseArray(self.vec, &self.data, self.readonly) self.hasarray = 0 return 0 # buffer interface (PEP 3118) cdef int acquirebuffer(self, Py_buffer *view, int flags) except -1: self.acquire() PyPetscBuffer_FillInfo(view, self.data, self.size, c's', self.readonly, flags) view.obj = self return 0 cdef int releasebuffer(self, Py_buffer *view) except -1: PyPetscBuffer_Release(view) self.release() return 0 def __getbuffer__(self, Py_buffer *view, int flags): self.acquirebuffer(view, flags) def __releasebuffer__(self, Py_buffer *view): self.releasebuffer(view) # 'with' statement (PEP 343) cdef object enter(self): self.acquire() return asarray(self) cdef object exit(self): self.release() return None def __enter__(self): return self.enter() def __exit__(self, *exc): return self.exit() # buffer interface (legacy) cdef Py_ssize_t getbuffer(self, void **p) except -1: cdef PetscInt n = 0 if p != NULL: self.acquire() p[0] = self.data n = self.size elif self.vec != NULL: CHKERR( VecGetLocalSize(self.vec, &n) ) return (n*sizeof(PetscScalar)) def __getsegcount__(self, Py_ssize_t *lenp): if lenp != NULL: lenp[0] = self.getbuffer(NULL) return 1 def __getreadbuffer__(self, Py_ssize_t idx, void **p): if idx != 0: raise SystemError( "accessing non-existent buffer segment") return self.getbuffer(p) def __getwritebuffer__(self, Py_ssize_t idx, void **p): if idx != 0: raise SystemError( "accessing non-existent buffer segment") if self.readonly: raise TypeError( "Object is not writable.") return self.getbuffer(p) # NumPy array interface (legacy) property __array_interface__: def __get__(self): cdef PetscInt n = 0 if self.vec != NULL: CHKERR( VecGetLocalSize(self.vec, &n) ) cdef object size = toInt(n) cdef dtype descr = PyArray_DescrFromType(NPY_PETSC_SCALAR) cdef str typestr = "=%c%d" % (descr.kind, descr.itemsize) return dict(version=3, data=self, shape=(size,), typestr=typestr) # -------------------------------------------------------------------- cdef class _Vec_LocalForm: "Context manager for `Vec` local form" cdef Vec gvec cdef Vec lvec def __init__(self, Vec gvec not None): self.gvec = gvec self.lvec = Vec() def __enter__(self): cdef PetscVec gvec = self.gvec.vec CHKERR( VecGhostGetLocalForm(gvec, &self.lvec.vec) ) return self.lvec def __exit__(self, *exc): cdef PetscVec gvec = self.gvec.vec CHKERR( VecGhostRestoreLocalForm(gvec, &self.lvec.vec) ) self.lvec.vec = NULL # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscsnes.pxi0000644000175000001440000003302712711377604020334 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef char* PetscSNESType "const char*" PetscSNESType SNESNEWTONLS PetscSNESType SNESNEWTONTR #PetscSNESType SNESPYTHON PetscSNESType SNESTEST PetscSNESType SNESNRICHARDSON PetscSNESType SNESKSPONLY PetscSNESType SNESVINEWTONRSLS PetscSNESType SNESVINEWTONSSLS PetscSNESType SNESNGMRES PetscSNESType SNESQN PetscSNESType SNESSHELL PetscSNESType SNESNGS PetscSNESType SNESNCG PetscSNESType SNESFAS PetscSNESType SNESMS PetscSNESType SNESNASM PetscSNESType SNESANDERSON PetscSNESType SNESASPIN PetscSNESType SNESCOMPOSITE ctypedef enum PetscSNESNormSchedule "SNESNormSchedule": SNES_NORM_DEFAULT SNES_NORM_NONE SNES_NORM_ALWAYS SNES_NORM_INITIAL_ONLY SNES_NORM_FINAL_ONLY SNES_NORM_INITIAL_FINAL_ONLY ctypedef enum PetscSNESConvergedReason "SNESConvergedReason": # iterating SNES_CONVERGED_ITERATING # converged SNES_CONVERGED_FNORM_ABS SNES_CONVERGED_FNORM_RELATIVE SNES_CONVERGED_SNORM_RELATIVE SNES_CONVERGED_ITS SNES_CONVERGED_TR_DELTA # diverged SNES_DIVERGED_FUNCTION_DOMAIN SNES_DIVERGED_FUNCTION_COUNT SNES_DIVERGED_LINEAR_SOLVE SNES_DIVERGED_FNORM_NAN SNES_DIVERGED_MAX_IT SNES_DIVERGED_LINE_SEARCH SNES_DIVERGED_INNER SNES_DIVERGED_LOCAL_MIN ctypedef int (*PetscSNESCtxDel)(void*) ctypedef int (*PetscSNESInitialGuessFunction)(PetscSNES, PetscVec, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscSNESFunctionFunction)(PetscSNES, PetscVec, PetscVec, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscSNESUpdateFunction)(PetscSNES, PetscInt) except PETSC_ERR_PYTHON ctypedef int (*PetscSNESJacobianFunction)(PetscSNES, PetscVec, PetscMat, PetscMat, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscSNESObjectiveFunction)(PetscSNES, PetscVec, PetscReal*, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscSNESConvergedFunction)(PetscSNES, PetscInt, PetscReal, PetscReal, PetscReal, PetscSNESConvergedReason*, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscSNESMonitorFunction)(PetscSNES, PetscInt, PetscReal, void*) except PETSC_ERR_PYTHON int SNESCreate(MPI_Comm,PetscSNES*) int SNESDestroy(PetscSNES*) int SNESView(PetscSNES,PetscViewer) int SNESSetType(PetscSNES,PetscSNESType) int SNESGetType(PetscSNES,PetscSNESType*) int SNESSetOptionsPrefix(PetscSNES,char[]) int SNESAppendOptionsPrefix(PetscSNES,char[]) int SNESGetOptionsPrefix(PetscSNES,char*[]) int SNESSetFromOptions(PetscSNES) int SNESGetKSP(PetscSNES,PetscKSP*) int SNESSetKSP(PetscSNES,PetscKSP) int SNESGetDM(PetscSNES,PetscDM*) int SNESSetDM(PetscSNES,PetscDM) # --- FAS --- int SNESFASSetInterpolation(PetscSNES,PetscInt,PetscMat) int SNESFASGetInterpolation(PetscSNES,PetscInt,PetscMat*) int SNESFASSetRestriction(PetscSNES,PetscInt,PetscMat) int SNESFASGetRestriction(PetscSNES,PetscInt,PetscMat*) int SNESFASSetInjection(PetscSNES,PetscInt,PetscMat) int SNESFASGetInjection(PetscSNES,PetscInt,PetscMat*) int SNESFASSetRScale(PetscSNES,PetscInt,PetscVec) int SNESFASSetLevels(PetscSNES,PetscInt,MPI_Comm[]) int SNESFASGetLevels(PetscSNES,PetscInt*) int SNESFASGetCycleSNES(PetscSNES,PetscInt,PetscSNES*) int SNESFASGetCoarseSolve(PetscSNES,PetscSNES*) int SNESFASGetSmoother(PetscSNES,PetscInt,PetscSNES*) int SNESFASGetSmootherDown(PetscSNES,PetscInt,PetscSNES*) int SNESFASGetSmootherUp(PetscSNES,PetscInt,PetscSNES*) int SNESGetNPC(PetscSNES,PetscSNES*) int SNESHasNPC(PetscSNES,PetscBool*) int SNESSetNPC(PetscSNES,PetscSNES) int SNESGetRhs(PetscSNES,PetscVec*) int SNESGetSolution(PetscSNES,PetscVec*) int SNESSetSolution(PetscSNES,PetscVec) int SNESGetSolutionUpdate(PetscSNES,PetscVec*) int SNESSetInitialGuess"SNESSetComputeInitialGuess"(PetscSNES,PetscSNESInitialGuessFunction,void*) int SNESSetFunction(PetscSNES,PetscVec,PetscSNESFunctionFunction,void*) int SNESGetFunction(PetscSNES,PetscVec*,PetscSNESFunctionFunction*,void**) int SNESSetUpdate(PetscSNES,PetscSNESUpdateFunction) int SNESSetJacobian(PetscSNES,PetscMat,PetscMat,PetscSNESJacobianFunction,void*) int SNESGetJacobian(PetscSNES,PetscMat*,PetscMat*,PetscSNESJacobianFunction*,void**) int SNESSetObjective(PetscSNES,PetscSNESObjectiveFunction,void*) int SNESGetObjective(PetscSNES,PetscSNESObjectiveFunction*,void**) int SNESComputeFunction(PetscSNES,PetscVec,PetscVec) int SNESComputeJacobian(PetscSNES,PetscVec,PetscMat,PetscMat) int SNESComputeObjective(PetscSNES,PetscVec,PetscReal*) int SNESSetNormSchedule(PetscSNES,PetscSNESNormSchedule) int SNESGetNormSchedule(PetscSNES,PetscSNESNormSchedule*) int SNESSetTolerances(PetscSNES,PetscReal,PetscReal,PetscReal,PetscInt,PetscInt) int SNESGetTolerances(PetscSNES,PetscReal*,PetscReal*,PetscReal*,PetscInt*,PetscInt*) int SNESSetConvergenceTest(PetscSNES,PetscSNESConvergedFunction,void*,PetscSNESCtxDel*) int SNESConvergedDefault(PetscSNES,PetscInt,PetscReal,PetscReal,PetscReal, PetscSNESConvergedReason*,void*) except PETSC_ERR_PYTHON int SNESConvergedSkip(PetscSNES,PetscInt,PetscReal,PetscReal,PetscReal, PetscSNESConvergedReason*,void*) except PETSC_ERR_PYTHON int SNESSetConvergenceHistory(PetscSNES,PetscReal[],PetscInt[],PetscInt,PetscBool) int SNESGetConvergenceHistory(PetscSNES,PetscReal*[],PetscInt*[],PetscInt*) int SNESLogConvergenceHistory(PetscSNES,PetscReal,PetscInt) int SNESMonitorSet(PetscSNES,PetscSNESMonitorFunction,void*,PetscSNESCtxDel) int SNESMonitorCancel(PetscSNES) int SNESMonitor(PetscSNES,PetscInt,PetscReal) int SNESSetUp(PetscSNES) int SNESReset(PetscSNES) int SNESSolve(PetscSNES,PetscVec,PetscVec) int SNESSetConvergedReason(PetscSNES,PetscSNESConvergedReason) int SNESGetConvergedReason(PetscSNES,PetscSNESConvergedReason*) int SNESSetIterationNumber(PetscSNES,PetscInt) int SNESGetIterationNumber(PetscSNES,PetscInt*) int SNESGetLinearSolveIterations(PetscSNES,PetscInt*) int SNESSetCountersReset(PetscSNES,PetscBool) int SNESGetNumberFunctionEvals(PetscSNES,PetscInt*) int SNESSetMaxNonlinearStepFailures(PetscSNES,PetscInt) int SNESGetMaxNonlinearStepFailures(PetscSNES,PetscInt*) int SNESGetNonlinearStepFailures(PetscSNES,PetscInt*) int SNESSetMaxLinearSolveFailures(PetscSNES,PetscInt) int SNESGetMaxLinearSolveFailures(PetscSNES,PetscInt*) int SNESGetLinearSolveFailures(PetscSNES,PetscInt*) int SNESKSPSetUseEW(PetscSNES,PetscBool) int SNESKSPGetUseEW(PetscSNES,PetscBool*) int SNESKSPSetParametersEW(PetscSNES,PetscInt,PetscReal,PetscReal, PetscReal,PetscReal,PetscReal,PetscReal) int SNESKSPGetParametersEW(PetscSNES,PetscInt*,PetscReal*,PetscReal*, PetscReal*,PetscReal*,PetscReal*,PetscReal*) int SNESVISetVariableBounds(PetscSNES,PetscVec,PetscVec) #ctypedef int (*PetscSNESVariableBoundsFunction)(PetscSNES,PetscVec,PetscVec) #int SNESVISetComputeVariableBounds(PetscSNES,PetscSNESVariableBoundsFunction) int SNESVIGetInactiveSet(PetscSNES, PetscIS*) int SNESCompositeGetSNES(PetscSNES,PetscInt,PetscSNES*) int SNESCompositeGetNumber(PetscSNES,PetscInt*) cdef extern from "custom.h" nogil: int SNESSetUseMFFD(PetscSNES,PetscBool) int SNESGetUseMFFD(PetscSNES,PetscBool*) int SNESSetUseFDColoring(PetscSNES,PetscBool) int SNESGetUseFDColoring(PetscSNES,PetscBool*) int SNESConvergenceTestCall(PetscSNES,PetscInt, PetscReal,PetscReal,PetscReal, PetscSNESConvergedReason*) cdef extern from "libpetsc4py.h": PetscSNESType SNESPYTHON int SNESPythonSetContext(PetscSNES,void*) int SNESPythonGetContext(PetscSNES,void**) int SNESPythonSetType(PetscSNES,char[]) # ----------------------------------------------------------------------------- cdef inline SNES ref_SNES(PetscSNES snes): cdef SNES ob = SNES() ob.snes = snes PetscINCREF(ob.obj) return ob # ----------------------------------------------------------------------------- cdef int SNES_InitialGuess( PetscSNES snes, PetscVec x, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef SNES Snes = ref_SNES(snes) cdef Vec Xvec = ref_Vec(x) cdef object context = Snes.get_attr('__initialguess__') if context is None and ctx != NULL: context = ctx assert context is not None and type(context) is tuple # sanity check (initialguess, args, kargs) = context initialguess(Snes, Xvec, *args, **kargs) return 0 # ----------------------------------------------------------------------------- cdef int SNES_Function( PetscSNES snes, PetscVec x, PetscVec f, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef SNES Snes = ref_SNES(snes) cdef Vec Xvec = ref_Vec(x) cdef Vec Fvec = ref_Vec(f) cdef object context = Snes.get_attr('__function__') if context is None and ctx != NULL: context = ctx assert context is not None and type(context) is tuple # sanity check (function, args, kargs) = context function(Snes, Xvec, Fvec, *args, **kargs) return 0 # ----------------------------------------------------------------------------- cdef int SNES_Update( PetscSNES snes, PetscInt its, ) except PETSC_ERR_PYTHON with gil: cdef SNES Snes = ref_SNES(snes) cdef object context = Snes.get_attr('__update__') assert context is not None and type(context) is tuple # sanity check (update, args, kargs) = context update(Snes, toInt(its), *args, **kargs) return 0 # ----------------------------------------------------------------------------- cdef int SNES_Jacobian( PetscSNES snes, PetscVec x, PetscMat J, PetscMat P, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef SNES Snes = ref_SNES(snes) cdef Vec Xvec = ref_Vec(x) cdef Mat Jmat = ref_Mat(J) cdef Mat Pmat = ref_Mat(P) cdef object context = Snes.get_attr('__jacobian__') if context is None and ctx != NULL: context = ctx assert context is not None and type(context) is tuple # sanity check (jacobian, args, kargs) = context jacobian(Snes, Xvec, Jmat, Pmat, *args, **kargs) return 0 # ----------------------------------------------------------------------------- cdef int SNES_Objective( PetscSNES snes, PetscVec x, PetscReal *o, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef SNES Snes = ref_SNES(snes) cdef Vec Xvec = ref_Vec(x) cdef object context = Snes.get_attr('__objective__') if context is None and ctx != NULL: context = ctx assert context is not None and type(context) is tuple # sanity check (objective, args, kargs) = context obj = objective(Snes, Xvec, *args, **kargs) o[0] = asReal(obj) return 0 # ----------------------------------------------------------------------------- cdef int SNES_Converged( PetscSNES snes, PetscInt iters, PetscReal xnorm, PetscReal gnorm, PetscReal fnorm, PetscSNESConvergedReason *r, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef SNES Snes = ref_SNES(snes) cdef object it = toInt(iters) cdef object xn = toReal(xnorm) cdef object gn = toReal(gnorm) cdef object fn = toReal(fnorm) cdef object context = Snes.get_attr('__converged__') if context is None and ctx != NULL: context = ctx assert context is not None and type(context) is tuple # sanity check (converged, args, kargs) = context reason = converged(Snes, it, (xn, gn, fn), *args, **kargs) if reason is None: r[0] = SNES_CONVERGED_ITERATING elif reason is False: r[0] = SNES_CONVERGED_ITERATING elif reason is True: r[0] = SNES_CONVERGED_ITS # XXX ? else: r[0] = reason return 0 # ----------------------------------------------------------------------------- cdef int SNES_Monitor( PetscSNES snes, PetscInt iters, PetscReal rnorm, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef SNES Snes = ref_SNES(snes) cdef object monitorlist = Snes.get_attr('__monitor__') if monitorlist is None: return 0 cdef object it = toInt(iters) cdef object rn = toReal(rnorm) for (monitor, args, kargs) in monitorlist: monitor(Snes, it, rn, *args, **kargs) return 0 # ----------------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscsct.pxi0000644000175000001440000000126412711377604020153 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from * nogil: int VecScatterView(PetscScatter,PetscViewer) int VecScatterDestroy(PetscScatter*) int VecScatterCreate(PetscVec,PetscIS,PetscVec,PetscIS,PetscScatter*) int VecScatterCopy(PetscScatter, PetscScatter*) int VecScatterCreateToAll(PetscVec,PetscScatter*,PetscVec*) int VecScatterCreateToZero(PetscVec,PetscScatter*,PetscVec*) int VecScatterBegin(PetscScatter,PetscVec,PetscVec,PetscInsertMode,PetscScatterMode) int VecScatterEnd(PetscScatter,PetscVec,PetscVec,PetscInsertMode,PetscScatterMode) # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/Log.pyx0000644000175000001440000002333712711377604017071 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef class Log: @classmethod def Stage(cls, name): if not name: raise ValueError("empty name") cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef PetscLogStage stageid = -1 cdef LogStage stage = get_LogStage(name) if stage is not None: return stage CHKERR( PetscLogStageFindId(cname, &stageid) ) if stageid == -1: CHKERR( PetscLogStageRegister(cname, &stageid) ) stage = reg_LogStage(name, stageid) return stage @classmethod def Class(cls, name): if not name: raise ValueError("empty name") cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef PetscLogClass classid = -1 cdef LogClass klass = get_LogClass(name) if klass is not None: return klass CHKERR( PetscLogClassFindId(cname, &classid) ) if classid == -1: CHKERR( PetscLogClassRegister(cname, &classid) ) klass = reg_LogClass(name, classid) return klass @classmethod def Event(cls, name, klass=None): if not name: raise ValueError("empty name") cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef PetscLogClass classid = PETSC_OBJECT_CLASSID cdef PetscLogEvent eventid = -1 if klass is not None: classid = klass cdef LogEvent event = get_LogEvent(name) if event is not None: return event CHKERR( PetscLogEventFindId(cname, &eventid) ) if eventid == -1: CHKERR( PetscLogEventRegister(cname, classid, &eventid) ) event = reg_LogEvent(name, eventid) return event @classmethod def begin(cls, all=False): if all: CHKERR( PetscLogAllBegin() ) else: CHKERR( PetscLogDefaultBegin() ) @classmethod def view(cls, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr if vwr == NULL: vwr = PETSC_VIEWER_STDOUT_WORLD CHKERR( PetscLogView(vwr) ) @classmethod def destroy(cls): CHKERR( PetscLogDestroy() ) @classmethod def logFlops(cls, flops): cdef PetscLogDouble cflops=flops CHKERR( PetscLogFlops(cflops) ) @classmethod def addFlops(cls, flops): cdef PetscLogDouble cflops=flops CHKERR( PetscLogFlops(cflops) ) @classmethod def getFlops(cls): cdef PetscLogDouble cflops=0 CHKERR( PetscGetFlops(&cflops) ) return cflops @classmethod def getTime(cls): cdef PetscLogDouble wctime=0 CHKERR( PetscTime(&wctime) ) return wctime @classmethod def getCPUTime(cls): cdef PetscLogDouble cputime=0 CHKERR( PetscGetCPUTime(&cputime) ) return cputime # -------------------------------------------------------------------- cdef class LogStage: cdef readonly PetscLogStage id def __cinit__(self): self.id = 0 def __int__(self): return self.id def __enter__(self): self.push() return self def __exit__(self, *exc): self.pop() # def push(self): CHKERR( PetscLogStagePush(self.id) ) def pop(self): self # unused CHKERR( PetscLogStagePop() ) # def getName(self): cdef const_char *cval = NULL CHKERR( PetscLogStageFindName(self.id, &cval) ) return bytes2str(cval) property name: def __get__(self): return self.getName() def __set__(self, value): self; value; # unused raise TypeError("readonly attribute") # def activate(self): CHKERR( PetscLogStageSetActive(self.id, PETSC_TRUE) ) def deactivate(self): CHKERR( PetscLogStageSetActive(self.id, PETSC_FALSE) ) def getActive(self): cdef PetscBool tval = PETSC_FALSE CHKERR( PetscLogStageGetActive(self.id, &tval) ) return tval def setActive(self, flag): cdef PetscBool tval = PETSC_FALSE if flag: tval = PETSC_TRUE CHKERR( PetscLogStageSetActive(self.id, tval) ) property active: def __get__(self): return self.getActive() def __set__(self, value): self.setActive(value) # def getVisible(self): cdef PetscBool tval = PETSC_FALSE CHKERR( PetscLogStageGetVisible(self.id, &tval) ) return tval def setVisible(self, flag): cdef PetscBool tval = PETSC_FALSE if flag: tval = PETSC_TRUE CHKERR( PetscLogStageSetVisible(self.id, tval) ) property visible: def __get__(self): return self.getVisible() def __set__(self, value): self.setVisible(value) cdef dict stage_registry = { } cdef LogStage get_LogStage(object name): return stage_registry.get(name) cdef LogStage reg_LogStage(object name, PetscLogStage stageid): cdef LogStage stage = LogStage() stage.id = stageid stage_registry[name] = stage return stage # -------------------------------------------------------------------- cdef class LogClass: cdef readonly PetscLogClass id def __cinit__(self): self.id = PETSC_OBJECT_CLASSID def __int__(self): return self.id # def getName(self): cdef const_char *cval = NULL CHKERR( PetscLogClassFindName(self.id, &cval) ) return bytes2str(cval) property name: def __get__(self): return self.getName() def __set__(self, value): self; value; # unused raise TypeError("readonly attribute") # def activate(self): CHKERR( PetscLogClassActivate(self.id) ) def deactivate(self): CHKERR( PetscLogClassDeactivate(self.id) ) def getActive(self): self # unused raise NotImplementedError def setActive(self, flag): if flag: CHKERR( PetscLogClassActivate(self.id) ) else: CHKERR( PetscLogClassDeactivate(self.id) ) property active: def __get__(self): return self.getActive() def __set__(self, value): self.setActive(value) cdef dict class_registry = { } cdef LogClass get_LogClass(object name): return class_registry.get(name) cdef LogClass reg_LogClass(object name, PetscLogClass classid): cdef LogClass klass = LogClass() klass.id = classid class_registry[name] = klass return klass # -------------------------------------------------------------------- cdef class LogEvent: cdef readonly PetscLogEvent id def __cinit__(self): self.id = 0 def __int__(self): return self.id def __enter__(self): self.begin() return self def __exit__(self, *exc): self.end() # def begin(self, *objs): cdef PetscObject o[4] event_args2objs(objs, o) CHKERR( PetscLogEventBegin(self.id, o[0], o[1], o[2], o[3]) ) def end(self, *objs): cdef PetscObject o[4] event_args2objs(objs, o) CHKERR( PetscLogEventEnd(self.id, o[0], o[1], o[2], o[3]) ) def barrierBegin(self, Comm comm=None, *objs): cdef PetscObject o[4] event_args2objs(objs, o) cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) if ccomm == MPI_COMM_NULL: ccomm = PETSC_COMM_DEFAULT CHKERR( PetscLogEventBarrierBegin(self.id, o[0], o[1], o[2], o[3], ccomm) ) def barrierEnd(self, Comm comm=None, *objs): cdef PetscObject o[4] event_args2objs(objs, o) cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) if ccomm == MPI_COMM_NULL: ccomm = PETSC_COMM_DEFAULT CHKERR( PetscLogEventBarrierEnd(self.id, o[0], o[1], o[2], o[3], ccomm) ) # def getName(self): cdef const_char *cval = NULL CHKERR( PetscLogEventFindName(self.id, &cval) ) return bytes2str(cval) property name: def __get__(self): return self.getName() def __set__(self, value): self; value; # unused raise TypeError("readonly attribute") # def activate(self): CHKERR( PetscLogEventActivate(self.id) ) def deactivate(self): CHKERR( PetscLogEventDeactivate(self.id) ) def getActive(self): self # unused raise NotImplementedError def setActive(self, flag): if flag: CHKERR( PetscLogEventActivate(self.id) ) else: CHKERR( PetscLogEventDeactivate(self.id) ) property active: def __get__(self): return self.getActive() def __set__(self, value): self.setActive(value) def getActiveAll(self): self # unused raise NotImplementedError def setActiveAll(self, flag): cdef PetscBool tval = PETSC_FALSE if flag: tval = PETSC_TRUE CHKERR( PetscLogEventSetActiveAll(self.id, tval) ) property active_all: def __get__(self): self.getActiveAll() def __set__(self, value): self.setActiveAll(value) # def getPerfInfo(self, stage=None): cdef PetscEventPerfInfo info cdef PetscInt cstage = PETSC_DETERMINE if stage is not None: cstage = asInt(stage) CHKERR( PetscLogEventGetPerfInfo(cstage, self.id, &info) ) return info cdef dict event_registry = { } cdef LogEvent get_LogEvent(object name): return event_registry.get(name) cdef LogEvent reg_LogEvent(object name, PetscLogEvent eventid): cdef LogEvent event = LogEvent() event.id = eventid event_registry[name] = event return event # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscdmshell.pxi0000644000175000001440000002710112711377604021010 0ustar dalcinlusers00000000000000ctypedef int (*PetscDMShellXToYFunction)(PetscDM, PetscVec, PetscInsertMode, PetscVec) except PETSC_ERR_PYTHON cdef extern from * nogil: ctypedef int (*PetscDMShellCreateVectorFunction)(PetscDM, PetscVec*) except PETSC_ERR_PYTHON ctypedef int (*PetscDMShellCreateMatrixFunction)(PetscDM, PetscMat*) except PETSC_ERR_PYTHON ctypedef int (*PetscDMShellTransferFunction)(PetscDM, MPI_Comm, PetscDM*) except PETSC_ERR_PYTHON ctypedef int (*PetscDMShellCreateInterpolationFunction)(PetscDM, PetscDM, PetscMat*, PetscVec*) except PETSC_ERR_PYTHON ctypedef int (*PetscDMShellCreateInjectionFunction)(PetscDM, PetscDM, PetscMat*) except PETSC_ERR_PYTHON ctypedef int (*PetscDMShellCreateFieldDecompositionFunction)(PetscDM, PetscInt*, char***, PetscIS**, PetscDM**) except PETSC_ERR_PYTHON ctypedef int (*PetscDMShellCreateSubDM)(PetscDM, PetscInt, PetscInt[], PetscIS*, PetscDM*) except PETSC_ERR_PYTHON int DMShellCreate(MPI_Comm,PetscDM*) int DMShellSetMatrix(PetscDM,PetscMat) int DMShellSetGlobalVector(PetscDM,PetscVec) int DMShellSetLocalVector(PetscDM,PetscVec) int DMShellSetCreateGlobalVector(PetscDM,PetscDMShellCreateVectorFunction) int DMShellSetCreateLocalVector(PetscDM,PetscDMShellCreateVectorFunction) int DMShellSetGlobalToLocal(PetscDM,PetscDMShellXToYFunction,PetscDMShellXToYFunction) int DMShellSetGlobalToLocalVecScatter(PetscDM,PetscScatter) int DMShellSetLocalToGlobal(PetscDM,PetscDMShellXToYFunction,PetscDMShellXToYFunction) int DMShellSetLocalToGlobalVecScatter(PetscDM,PetscScatter) int DMShellSetLocalToLocal(PetscDM,PetscDMShellXToYFunction,PetscDMShellXToYFunction) int DMShellSetLocalToLocalVecScatter(PetscDM,PetscScatter) int DMShellSetCreateMatrix(PetscDM,PetscDMShellCreateMatrixFunction) int DMShellSetCoarsen(PetscDM,PetscDMShellTransferFunction) int DMShellSetRefine(PetscDM,PetscDMShellTransferFunction) int DMShellSetCreateInterpolation(PetscDM,PetscDMShellCreateInterpolationFunction) int DMShellSetCreateInjection(PetscDM,PetscDMShellCreateInjectionFunction) int DMShellSetCreateFieldDecomposition(PetscDM,PetscDMShellCreateFieldDecompositionFunction) int DMShellSetCreateSubDM(PetscDM,PetscDMShellCreateSubDM) cdef int DMSHELL_CreateGlobalVector( PetscDM dm, PetscVec *v) except PETSC_ERR_PYTHON with gil: cdef DM Dm = subtype_DM(dm)() cdef Vec vec Dm.dm = dm PetscINCREF(Dm.obj) context = Dm.get_attr('__create_global_vector__') assert context is not None and type(context) is tuple (create_gvec, args, kargs) = context vec = create_gvec(Dm, *args, **kargs) PetscINCREF(vec.obj) v[0] = vec.vec return 0 cdef int DMSHELL_CreateLocalVector( PetscDM dm, PetscVec *v) except PETSC_ERR_PYTHON with gil: cdef DM Dm = subtype_DM(dm)() cdef Vec vec Dm.dm = dm PetscINCREF(Dm.obj) context = Dm.get_attr('__create_local_vector__') assert context is not None and type(context) is tuple (create_lvec, args, kargs) = context vec = create_lvec(Dm, *args, **kargs) PetscINCREF(vec.obj) v[0] = vec.vec return 0 cdef int DMSHELL_GlobalToLocalBegin( PetscDM dm, PetscVec g, PetscInsertMode mode, PetscVec l) except PETSC_ERR_PYTHON with gil: cdef DM Dm = subtype_DM(dm)() cdef Vec gvec = ref_Vec(g) cdef Vec lvec = ref_Vec(l) Dm.dm = dm PetscINCREF(Dm.obj) context = Dm.get_attr('__g2l_begin__') assert context is not None and type(context) is tuple (begin, args, kargs) = context begin(Dm, gvec, mode, lvec, *args, **kargs) return 0 cdef int DMSHELL_GlobalToLocalEnd( PetscDM dm, PetscVec g, PetscInsertMode mode, PetscVec l) except PETSC_ERR_PYTHON with gil: cdef DM Dm = subtype_DM(dm)() cdef Vec gvec = ref_Vec(g) cdef Vec lvec = ref_Vec(l) Dm.dm = dm PetscINCREF(Dm.obj) context = Dm.get_attr('__g2l_end__') assert context is not None and type(context) is tuple (end, args, kargs) = context end(Dm, gvec, mode, lvec, *args, **kargs) return 0 cdef int DMSHELL_LocalToGlobalBegin( PetscDM dm, PetscVec g, PetscInsertMode mode, PetscVec l) except PETSC_ERR_PYTHON with gil: cdef DM Dm = subtype_DM(dm)() cdef Vec gvec = ref_Vec(g) cdef Vec lvec = ref_Vec(l) Dm.dm = dm PetscINCREF(Dm.obj) context = Dm.get_attr('__l2g_begin__') assert context is not None and type(context) is tuple (begin, args, kargs) = context begin(Dm, gvec, mode, lvec, *args, **kargs) return 0 cdef int DMSHELL_LocalToGlobalEnd( PetscDM dm, PetscVec g, PetscInsertMode mode, PetscVec l) except PETSC_ERR_PYTHON with gil: cdef DM Dm = subtype_DM(dm)() cdef Vec gvec = ref_Vec(g) cdef Vec lvec = ref_Vec(l) Dm.dm = dm PetscINCREF(Dm.obj) context = Dm.get_attr('__l2g_end__') assert context is not None and type(context) is tuple (end, args, kargs) = context end(Dm, gvec, mode, lvec, *args, **kargs) return 0 cdef int DMSHELL_LocalToLocalBegin( PetscDM dm, PetscVec g, PetscInsertMode mode, PetscVec l) except PETSC_ERR_PYTHON with gil: cdef DM Dm = subtype_DM(dm)() cdef Vec gvec = ref_Vec(g) cdef Vec lvec = ref_Vec(l) Dm.dm = dm PetscINCREF(Dm.obj) context = Dm.get_attr('__l2l_begin__') assert context is not None and type(context) is tuple (begin, args, kargs) = context begin(Dm, gvec, mode, lvec, *args, **kargs) return 0 cdef int DMSHELL_LocalToLocalEnd( PetscDM dm, PetscVec g, PetscInsertMode mode, PetscVec l) except PETSC_ERR_PYTHON with gil: cdef DM Dm = subtype_DM(dm)() cdef Vec gvec = ref_Vec(g) cdef Vec lvec = ref_Vec(l) Dm.dm = dm PetscINCREF(Dm.obj) context = Dm.get_attr('__l2l_end__') assert context is not None and type(context) is tuple (end, args, kargs) = context end(Dm, gvec, mode, lvec, *args, **kargs) return 0 cdef int DMSHELL_CreateMatrix( PetscDM dm, PetscMat *cmat) except PETSC_ERR_PYTHON with gil: cdef DM Dm = subtype_DM(dm)() cdef Mat mat Dm.dm = dm PetscINCREF(Dm.obj) context = Dm.get_attr('__create_matrix__') assert context is not None and type(context) is tuple (matrix, args, kargs) = context mat = matrix(Dm, *args, **kargs) PetscINCREF(mat.obj) cmat[0] = mat.mat return 0 cdef int DMSHELL_Coarsen( PetscDM dm, MPI_Comm comm, PetscDM *dmc) except PETSC_ERR_PYTHON with gil: cdef DM Dm = subtype_DM(dm)() cdef DM Dmc cdef Comm Comm = new_Comm(comm) Dm.dm = dm PetscINCREF(Dm.obj) context = Dm.get_attr('__coarsen__') assert context is not None and type(context) is tuple (coarsen, args, kargs) = context Dmc = coarsen(Dm, Comm, *args, **kargs) PetscINCREF(Dmc.obj) dmc[0] = Dmc.dm return 0 cdef int DMSHELL_Refine( PetscDM dm, MPI_Comm comm, PetscDM *dmf) except PETSC_ERR_PYTHON with gil: cdef DM Dm = subtype_DM(dm)() cdef DM Dmf cdef Comm Comm = new_Comm(comm) Dm.dm = dm PetscINCREF(Dm.obj) context = Dm.get_attr('__refine__') assert context is not None and type(context) is tuple (refine, args, kargs) = context Dmf = refine(Dm, Comm, *args, **kargs) PetscINCREF(Dmf.obj) dmf[0] = Dmf.dm return 0 cdef int DMSHELL_CreateInterpolation( PetscDM dmc, PetscDM dmf, PetscMat *cmat, PetscVec *cvec) except PETSC_ERR_PYTHON with gil: cdef DM Dmc = subtype_DM(dmc)() cdef DM Dmf = subtype_DM(dmf)() cdef Mat mat cdef Vec vec Dmc.dm = dmc PetscINCREF(Dmc.obj) Dmf.dm = dmf PetscINCREF(Dmf.obj) context = Dmc.get_attr('__create_interpolation__') assert context is not None and type(context) is tuple (interpolation, args, kargs) = context mat, vec = interpolation(Dmc, Dmf, *args, **kargs) PetscINCREF(mat.obj) cmat[0] = mat.mat if vec is None: cvec[0] = NULL else: PetscINCREF(vec.obj) cvec[0] = vec.vec return 0 cdef int DMSHELL_CreateInjection( PetscDM dmc, PetscDM dmf, PetscMat *cmat) except PETSC_ERR_PYTHON with gil: cdef DM Dmc = subtype_DM(dmc)() cdef DM Dmf = subtype_DM(dmf)() cdef Mat mat Dmc.dm = dmc PetscINCREF(Dmc.obj) Dmf.dm = dmf PetscINCREF(Dmf.obj) context = Dmc.get_attr('__create_injection__') assert context is not None and type(context) is tuple (injection, args, kargs) = context mat = injection(Dmc, Dmf, *args, **kargs) PetscINCREF(mat.obj) cmat[0] = mat.mat return 0 cdef int DMSHELL_CreateFieldDecomposition( PetscDM dm, PetscInt *clen, char ***namelist, PetscIS **islist, PetscDM **dmlist) except PETSC_ERR_PYTHON with gil: cdef DM Dm = subtype_DM(dm)() cdef int i cdef const_char *cname = NULL Dm.dm = dm PetscINCREF(Dm.obj) context = Dm.get_attr('__create_field_decomp__') assert context is not None and type(context) is tuple (decomp, args, kargs) = context names, ises, dms = decomp(Dm, *args, **kargs) if clen != NULL: if names is not None: clen[0] = len(names) elif ises is not None: clen[0] = len(ises) elif dms is not None: clen[0] = len(dms) else: clen[0] = 0 if namelist != NULL and names is not None: CHKERR( PetscMalloc(len(names)*sizeof(char**), namelist) ) for i in range(len(names)): names[i] = str2bytes(names[i], &cname) CHKERR( PetscStrallocpy(cname, &(namelist[0][i])) ) if islist != NULL and ises is not None: CHKERR( PetscMalloc(len(ises)*sizeof(PetscIS), islist) ) for i in range(len(ises)): islist[0][i] = (ises[i]).iset PetscINCREF((ises[i]).obj) if dmlist != NULL and dms is not None: CHKERR( PetscMalloc(len(dms)*sizeof(PetscDM), dmlist) ) for i in range(len(dms)): dmlist[0][i] = (dms[i]).dm PetscINCREF((dms[i]).obj) return 0 cdef int DMSHELL_CreateSubDM( PetscDM cdm, PetscInt numFields, PetscInt cfields[], PetscIS *ciset, PetscDM *csubdm) except PETSC_ERR_PYTHON with gil: cdef DM dm = subtype_DM(cdm)() cdef IS iset cdef DM subdm dm.dm = cdm PetscINCREF(dm.obj) context = dm.get_attr('__create_subdm__') assert context is not None and type(context) is tuple (create_subdm, args, kargs) = context fields = array_i(numFields, cfields) iset, subdm = create_subdm(dm, fields, *args, **kargs) PetscINCREF(iset.obj) PetscINCREF(subdm.obj) ciset[0] = iset.iset csubdm[0] = subdm.dm petsc4py-3.7.0/src/PETSc/petscsf.pxi0000644000175000001440000000200712711377604017766 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from * nogil: ctypedef char* PetscSFType "const char*" PetscSFType PETSCSFBASIC PetscSFType PETSCSFWINDOW int PetscSFCreate(MPI_Comm,PetscSF*) int PetscSFSetType(PetscSF,PetscSFType) #int PetscSFGetType(PetscSF,PetscSFType*) int PetscSFSetFromOptions(PetscSF) int PetscSFSetUp(PetscSF) int PetscSFView(PetscSF,PetscViewer) int PetscSFReset(PetscSF) int PetscSFDestroy(PetscSF*) struct PetscSFNode: PetscInt rank PetscInt index ctypedef PetscSFNode PetscSFNode "PetscSFNode" ctypedef PetscSFNode const_PetscSFNode "const PetscSFNode" int PetscSFGetGraph(PetscSF,PetscInt*,PetscInt*,const_PetscInt**,const_PetscSFNode**) int PetscSFSetGraph(PetscSF,PetscInt,PetscInt,const_PetscInt*,PetscCopyMode,PetscSFNode*,PetscCopyMode) int PetscSFSetRankOrder(PetscSF,PetscBool) int PetscSFGetMultiSF(PetscSF,PetscSF*) int PetscSFCreateInverseSF(PetscSF,PetscSF*) petsc4py-3.7.0/src/PETSc/TAO.pyx0000644000175000001440000004755112711377604016777 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class TAOType: """ TAO Solver Types """ LMVM = S_(TAOLMVM) NLS = S_(TAONLS) NTR = S_(TAONTR) NTL = S_(TAONTL) CG = S_(TAOCG) TRON = S_(TAOTRON) OWLQN = S_(TAOOWLQN) BMRM = S_(TAOBMRM) BLMVM = S_(TAOBLMVM) BQPIP = S_(TAOBQPIP) GPCG = S_(TAOGPCG) NM = S_(TAONM) POUNDERS = S_(TAOPOUNDERS) LCL = S_(TAOLCL) SSILS = S_(TAOSSILS) SSFLS = S_(TAOSSFLS) ASILS = S_(TAOASILS) ASFLS = S_(TAOASFLS) IPM = S_(TAOIPM) TEST = S_(TAOTEST) class TAOConvergedReason: """ TAO Solver Termination Reasons """ # iterating CONTINUE_ITERATING = TAO_CONTINUE_ITERATING # iterating CONVERGED_ITERATING = TAO_CONTINUE_ITERATING # iterating ITERATING = TAO_CONTINUE_ITERATING # iterating # converged CONVERGED_GATOL = TAO_CONVERGED_GATOL # ||g(X)|| < gatol CONVERGED_GRTOL = TAO_CONVERGED_GRTOL # ||g(X)||/f(X) < grtol CONVERGED_GTTOL = TAO_CONVERGED_GTTOL # ||g(X)||/||g(X0)|| < gttol CONVERGED_STEPTOL = TAO_CONVERGED_STEPTOL # small step size CONVERGED_MINF = TAO_CONVERGED_MINF # f(X) < F_min CONVERGED_USER = TAO_CONVERGED_USER # user defined # diverged DIVERGED_MAXITS = TAO_DIVERGED_MAXITS # DIVERGED_NAN = TAO_DIVERGED_NAN # DIVERGED_MAXFCN = TAO_DIVERGED_MAXFCN # DIVERGED_LS_FAILURE = TAO_DIVERGED_LS_FAILURE # DIVERGED_TR_REDUCTION = TAO_DIVERGED_TR_REDUCTION # DIVERGED_USER = TAO_DIVERGED_USER # user defined # -------------------------------------------------------------------- cdef class TAO(Object): """ TAO Solver """ Type = TAOType Reason = TAOConvergedReason def __cinit__(self): self.obj = &self.tao self.tao = NULL def view(self, Viewer viewer=None): """ """ cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( TaoView(self.tao, vwr) ) def destroy(self): """ """ CHKERR( TaoDestroy(&self.tao) ) return self def create(self, comm=None): """ """ cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscTAO newtao = NULL CHKERR( TaoCreate(ccomm, &newtao) ) PetscCLEAR(self.obj); self.tao = newtao return self def setType(self, tao_type): """ """ cdef PetscTAOType ctype = NULL tao_type = str2bytes(tao_type, &ctype) CHKERR( TaoSetType(self.tao, ctype) ) def getType(self): """ """ cdef PetscTAOType ctype = NULL CHKERR( TaoGetType(self.tao, &ctype) ) return bytes2str(ctype) def setOptionsPrefix(self, prefix): """ """ cdef const_char *cprefix = NULL prefix = str2bytes(prefix, &cprefix) CHKERR( TaoSetOptionsPrefix(self.tao, cprefix) ) def getOptionsPrefix(self): """ """ cdef const_char *prefix = NULL CHKERR( TaoGetOptionsPrefix(self.tao, &prefix) ) return bytes2str(prefix) def setFromOptions(self): """ """ CHKERR( TaoSetFromOptions(self.tao) ) def setUp(self): """ """ CHKERR( TaoSetUp(self.tao) ) # def setInitialTrustRegionRadius(self, radius): cdef PetscReal cradius = asReal(radius) CHKERR( TaoSetInitialTrustRegionRadius(self.tao, cradius) ) # -------------- def setAppCtx(self, appctx): self.set_attr("__appctx__", appctx) def getAppCtx(self): return self.get_attr("__appctx__") def setInitial(self, Vec x not None): """ """ CHKERR( TaoSetInitialVector(self.tao, x.vec) ) def setObjective(self, objective, args=None, kargs=None): """ """ CHKERR( TaoSetObjectiveRoutine(self.tao, TAO_Objective, NULL) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr("__objective__", (objective, args, kargs)) def setSeparableObjective(self, separable, Vec O=None, args=None, kargs=None): """ """ cdef PetscVec Ovec = NULL if O is not None: Ovec = O.vec CHKERR( TaoSetSeparableObjectiveRoutine(self.tao, Ovec, TAO_SeparableObjective, NULL) ) CHKERR( PetscObjectCompose(self.obj[0], "@sepobjvec", Ovec) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr("__separable__", (separable, args, kargs)) def setGradient(self, gradient, args=None, kargs=None): """ """ CHKERR( TaoSetGradientRoutine(self.tao, TAO_Gradient, NULL) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr("__gradient__", (gradient, args, kargs)) def setObjectiveGradient(self, objgrad, args=None, kargs=None): """ """ CHKERR( TaoSetObjectiveAndGradientRoutine(self.tao, TAO_ObjGrad, NULL) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr("__objgrad__", (objgrad, args, kargs)) def setVariableBounds(self, varbounds, args=None, kargs=None): """ """ cdef Vec xl=None, xu=None if (isinstance(varbounds, list) or isinstance(varbounds, tuple)): ol, ou = varbounds xl = ol; xu = ou CHKERR( TaoSetVariableBounds(self.tao, xl.vec, xu.vec) ) return if isinstance(varbounds, Vec): ol = varbounds; ou = args xl = ol; xu = ou CHKERR( TaoSetVariableBounds(self.tao, xl.vec, xu.vec) ) return CHKERR( TaoSetVariableBoundsRoutine(self.tao, TAO_VarBounds, NULL) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr("__varbounds__", (varbounds, args, kargs)) def setConstraints(self, constraints, Vec C=None, args=None, kargs=None): """ """ cdef PetscVec Cvec=NULL if C is not None: Cvec = C.vec CHKERR( TaoSetConstraintsRoutine(self.tao, Cvec, TAO_Constraints, NULL) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr("__constraints__", (constraints, args, kargs)) def setHessian(self, hessian, Mat H=None, Mat P=None, args=None, kargs=None): cdef PetscMat Hmat=NULL if H is not None: Hmat = H.mat cdef PetscMat Pmat = Hmat if P is not None: Pmat = P.mat CHKERR( TaoSetHessianRoutine(self.tao, Hmat, Pmat, TAO_Hessian, NULL) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr("__hessian__", (hessian, args, kargs)) def setJacobian(self, jacobian, Mat J=None, Mat P=None, args=None, kargs=None): """ """ cdef PetscMat Jmat=NULL if J is not None: Jmat = J.mat cdef PetscMat Pmat = Jmat if P is not None: Pmat = P.mat CHKERR( TaoSetJacobianRoutine(self.tao, Jmat, Pmat, TAO_Jacobian, NULL) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr("__jacobian__", (jacobian, args, kargs)) # def setStateDesignIS(self, IS state, IS design): """ """ cdef PetscIS s_is = NULL, d_is = NULL if state is not None: s_is = state.iset if design is not None: d_is = design.iset CHKERR( TaoSetStateDesignIS(self.tao, s_is, d_is) ) def setJacobianState(self, jacobian_state, Mat J=None, Mat P=None, Mat I=None, args=None, kargs=None): """ """ cdef PetscMat Jmat=NULL if J is not None: Jmat = J.mat cdef PetscMat Pmat = Jmat if P is not None: Pmat = P.mat cdef PetscMat Imat = NULL if I is not None: Imat = I.mat CHKERR( TaoSetJacobianStateRoutine(self.tao, Jmat, Pmat, Imat, TAO_JacobianState, NULL) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr("__jacobian_state__", (jacobian_state, args, kargs)) def setJacobianDesign(self, jacobian_design, Mat J=None, args=None, kargs=None): """ """ cdef PetscMat Jmat=NULL if J is not None: Jmat = J.mat CHKERR( TaoSetJacobianDesignRoutine(self.tao, Jmat, TAO_JacobianDesign, NULL) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr("__jacobian_design__", (jacobian_design, args, kargs)) # -------------- def computeObjective(self, Vec x not None): """ """ cdef PetscReal f = 0 CHKERR( TaoComputeObjective(self.tao, x.vec, &f) ) return toReal(f) def computeSeparableObjective(self, Vec x not None, Vec f not None): """ """ CHKERR( TaoComputeSeparableObjective(self.tao, x.vec, f.vec) ) def computeGradient(self, Vec x not None, Vec g not None): """ """ CHKERR( TaoComputeGradient(self.tao, x.vec, g.vec) ) def computeObjectiveGradient(self, Vec x not None, Vec g not None): """ """ cdef PetscReal f = 0 CHKERR( TaoComputeObjectiveAndGradient(self.tao, x.vec, &f, g.vec) ) return toReal(f) def computeDualVariables(self, Vec xl not None, Vec xu not None): """ """ CHKERR( TaoComputeDualVariables(self.tao, xl.vec, xu.vec) ) def computeVariableBounds(self, Vec xl not None, Vec xu not None): """ """ CHKERR( TaoComputeVariableBounds(self.tao) ) cdef PetscVec Lvec = NULL, Uvec = NULL CHKERR( TaoGetVariableBounds(self.tao, &Lvec, &Uvec) ) if xl.vec != NULL: if Lvec != NULL: CHKERR( VecCopy(Lvec, xl.vec) ) else: CHKERR( VecSet(xl.vec, PETSC_NINFINITY) ) if xu.vec != NULL: if Uvec != NULL: CHKERR( VecCopy(Uvec, xu.vec) ) else: CHKERR( VecSet(xu.vec, PETSC_INFINITY) ) def computeConstraints(self, Vec x not None, Vec c not None): """ """ CHKERR( TaoComputeConstraints(self.tao, x.vec, c.vec) ) def computeHessian(self, Vec x not None, Mat H not None, Mat P=None): """ """ cdef PetscMat hmat = H.mat, pmat = H.mat if P is not None: pmat = P.mat CHKERR( TaoComputeHessian(self.tao, x.vec, hmat, pmat) ) def computeJacobian(self, Vec x not None, Mat J not None, Mat P=None): """ """ cdef PetscMat jmat = J.mat, pmat = J.mat if P is not None: pmat = P.mat CHKERR( TaoComputeJacobian(self.tao, x.vec, jmat, pmat) ) # -------------- # def setTolerances(self, gatol=None, grtol=None, gttol=None): """ """ cdef PetscReal _gatol=PETSC_DEFAULT, _grtol=PETSC_DEFAULT, _gttol=PETSC_DEFAULT if gatol is not None: _gatol = asReal(gatol) if grtol is not None: _grtol = asReal(grtol) if gttol is not None: _gttol = asReal(gttol) CHKERR( TaoSetTolerances(self.tao, _gatol, _grtol, _gttol) ) def getTolerances(self): """ """ cdef PetscReal _gatol=PETSC_DEFAULT, _grtol=PETSC_DEFAULT, _gttol=PETSC_DEFAULT CHKERR( TaoGetTolerances(self.tao, &_gatol, &_grtol, &_gttol) ) return (toReal(_gatol), toReal(_grtol), toReal(_gttol)) def setConstraintTolerances(self, catol=None, crtol=None): """ """ cdef PetscReal _catol=PETSC_DEFAULT, _crtol=PETSC_DEFAULT if catol is not None: _catol = asReal(catol) if crtol is not None: _crtol = asReal(crtol) CHKERR( TaoSetConstraintTolerances(self.tao, _catol, _crtol) ) def getConstraintTolerances(self): """ """ cdef PetscReal _catol=PETSC_DEFAULT, _crtol=PETSC_DEFAULT CHKERR( TaoGetConstraintTolerances(self.tao, &_catol, &_crtol) ) return (toReal(_catol), toReal(_crtol)) def setConvergenceTest(self, converged, args=None, kargs=None): """ """ if converged is None: CHKERR( TaoSetConvergenceTest(self.tao, TaoDefaultConvergenceTest, NULL) ) self.set_attr('__converged__', None) else: if args is None: args = () if kargs is None: kargs = {} self.set_attr('__converged__', (converged, args, kargs)) CHKERR( TaoSetConvergenceTest(self.tao, TAO_Converged, NULL) ) def getConvergenceTest(self): """ """ return self.get_attr('__converged__') def setConvergedReason(self, reason): """ """ cdef PetscTAOConvergedReason creason = reason CHKERR( TaoSetConvergedReason(self.tao, creason) ) def getConvergedReason(self): """ """ cdef PetscTAOConvergedReason creason = TAO_CONTINUE_ITERATING CHKERR( TaoGetConvergedReason(self.tao, &creason) ) return creason def setMonitor(self, monitor, args=None, kargs=None): """ """ if monitor is None: return cdef object monitorlist = self.get_attr('__monitor__') if monitorlist is None: CHKERR( TaoSetMonitor(self.tao, TAO_Monitor, NULL, NULL) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr('__monitor__', [(monitor, args, kargs)]) else: monitorlist.append((monitor, args, kargs)) def getMonitor(self): """ """ return self.get_attr('__monitor__') def cancelMonitor(self): """ """ CHKERR( TaoCancelMonitors(self.tao) ) self.set_attr('__monitor__', None) # def solve(self, Vec x=None): """ """ if x is not None: CHKERR( TaoSetInitialVector(self.tao, x.vec) ) CHKERR( TaoSolve(self.tao) ) def getSolution(self): """ """ cdef Vec vec = Vec() CHKERR( TaoGetSolutionVector(self.tao, &vec.vec) ) PetscINCREF(vec.obj) return vec def getGradient(self): """ """ cdef Vec vec = Vec() CHKERR( TaoGetGradientVector(self.tao, &vec.vec) ) PetscINCREF(vec.obj) return vec def setGradientNorm(self, Mat mat): """ """ CHKERR( TaoSetGradientNorm(self.tao, mat.mat) ) def getGradientNorm(self): """ """ cdef Mat mat = Mat() CHKERR( TaoGetGradientNorm(self.tao, &mat.mat) ) PetscINCREF(mat.obj) return mat def setLMVMH0(self, Mat mat): """ """ CHKERR( TaoLMVMSetH0(self.tao, mat.mat) ) def getLMVMH0(self): """ """ cdef Mat mat = Mat() CHKERR( TaoLMVMGetH0(self.tao, &mat.mat) ) PetscINCREF(mat.obj) return mat def getLMVMH0KSP(self): """ """ cdef KSP ksp = KSP() CHKERR( TaoLMVMGetH0KSP(self.tao, &ksp.ksp) ) PetscINCREF(ksp.obj) return ksp def getVariableBounds(self): """ """ cdef Vec xl = Vec(), xu = Vec() CHKERR( TaoGetVariableBounds(self.tao, &xl.vec, &xu.vec) ) PetscINCREF(xl.obj); PetscINCREF(xu.obj) return (xl, xu) def getIterationNumber(self): """ """ cdef PetscInt its=0 CHKERR( TaoGetSolutionStatus(self.tao, &its, NULL, NULL, NULL, NULL, NULL) ) return toInt(its) def getObjectiveValue(self): """ """ cdef PetscReal fval=0 CHKERR( TaoGetSolutionStatus(self.tao, NULL, &fval, NULL, NULL, NULL, NULL) ) return toReal(fval) getFunctionValue = getObjectiveValue def getConvergedReason(self): """ """ cdef PetscTAOConvergedReason reason = TAO_CONTINUE_ITERATING CHKERR( TaoGetConvergedReason(self.tao, &reason) ) return reason def getSolutionNorm(self): """ """ cdef PetscReal gnorm=0 cdef PetscReal cnorm=0 cdef PetscReal fval=0 CHKERR( TaoGetSolutionStatus(self.tao, NULL, &fval, &gnorm, &cnorm, NULL, NULL) ) return (toReal(fval), toReal(gnorm), toReal(cnorm)) def getSolutionStatus(self): """ """ cdef PetscInt its=0 cdef PetscReal fval=0, gnorm=0, cnorm=0, xdiff=0 cdef PetscTAOConvergedReason reason = TAO_CONTINUE_ITERATING CHKERR( TaoGetSolutionStatus(self.tao, &its, &fval, &gnorm, &cnorm, &xdiff, &reason) ) return (toInt(its), toReal(fval), toReal(gnorm), toReal(cnorm), toReal(xdiff), reason) def getKSP(self): """ """ cdef KSP ksp = KSP() CHKERR( TaoGetKSP(self.tao, &ksp.ksp) ) PetscINCREF(ksp.obj) return ksp # --- application context --- property appctx: def __get__(self): return self.getAppCtx() def __set__(self, value): self.setAppCtx(value) # --- linear solver --- property ksp: def __get__(self): return self.getKSP() # --- tolerances --- property ftol: def __get__(self): return self.getFunctionTolerances() def __set__(self, value): if isinstance(value, (tuple, list)): self.setFunctionTolerances(*value) elif isinstance(value, dict): self.setFunctionTolerances(**value) else: raise TypeError("expecting tuple/list or dict") property gtol: def __get__(self): return self.getGradientTolerances() def __set__(self, value): if isinstance(value, (tuple, list)): self.getGradientTolerances(*value) elif isinstance(value, dict): self.getGradientTolerances(**value) else: raise TypeError("expecting tuple/list or dict") property ctol: def __get__(self): return self.getConstraintTolerances() def __set__(self, value): if isinstance(value, (tuple, list)): self.getConstraintTolerances(*value) elif isinstance(value, dict): self.getConstraintTolerances(**value) else: raise TypeError("expecting tuple/list or dict") # --- iteration --- property its: def __get__(self): return self.getIterationNumber() property gnorm: def __get__(self): return self.getSolutionNorm()[1] property cnorm: def __get__(self): return self.getSolutionNorm()[2] property solution: def __get__(self): return self.getSolution() property objective: def __get__(self): return self.getObjectiveValue() property function: def __get__(self): return self.getFunctionValue() property gradient: def __get__(self): return self.getGradient() # --- convergence --- property reason: def __get__(self): return self.getConvergedReason() property iterating: def __get__(self): return self.reason == 0 property converged: def __get__(self): return self.reason > 0 property diverged: def __get__(self): return self.reason < 0 # -------------------------------------------------------------------- del TAOType del TAOConvergedReason # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/SNES.pyx0000644000175000001440000006707512711377604017127 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class SNESType(object): NEWTONLS = S_(SNESNEWTONLS) NEWTONTR = S_(SNESNEWTONTR) PYTHON = S_(SNESPYTHON) TEST = S_(SNESTEST) NRICHARDSON = S_(SNESNRICHARDSON) KSPONLY = S_(SNESKSPONLY) VINEWTONRSLS = S_(SNESVINEWTONRSLS) VINEWTONSSLS = S_(SNESVINEWTONSSLS) NGMRES = S_(SNESNGMRES) QN = S_(SNESQN) SHELL = S_(SNESSHELL) NGS = S_(SNESNGS) NCG = S_(SNESNCG) FAS = S_(SNESFAS) MS = S_(SNESMS) NASM = S_(SNESNASM) ANDERSON = S_(SNESANDERSON) ASPIN = S_(SNESASPIN) COMPOSITE = S_(SNESCOMPOSITE) class SNESNormSchedule(object): # native NORM_DEFAULT = SNES_NORM_DEFAULT NORM_NONE = SNES_NORM_NONE NORM_ALWAYS = SNES_NORM_ALWAYS NORM_INITIAL_ONLY = SNES_NORM_INITIAL_ONLY NORM_FINAL_ONLY = SNES_NORM_FINAL_ONLY NORM_INITIAL_FINAL_ONLY = SNES_NORM_INITIAL_FINAL_ONLY # aliases DEFAULT = NORM_DEFAULT NONE = NORM_NONE ALWAYS = NORM_ALWAYS INITIAL_ONLY = NORM_INITIAL_ONLY FINAL_ONLY = NORM_FINAL_ONLY INITIAL_FINAL_ONLY = NORM_INITIAL_FINAL_ONLY class SNESConvergedReason(object): # iterating CONVERGED_ITERATING = SNES_CONVERGED_ITERATING ITERATING = SNES_CONVERGED_ITERATING # converged CONVERGED_FNORM_ABS = SNES_CONVERGED_FNORM_ABS CONVERGED_FNORM_RELATIVE = SNES_CONVERGED_FNORM_RELATIVE CONVERGED_SNORM_RELATIVE = SNES_CONVERGED_SNORM_RELATIVE CONVERGED_ITS = SNES_CONVERGED_ITS CONVERGED_TR_DELTA = SNES_CONVERGED_TR_DELTA # diverged DIVERGED_FUNCTION_DOMAIN = SNES_DIVERGED_FUNCTION_DOMAIN DIVERGED_FUNCTION_COUNT = SNES_DIVERGED_FUNCTION_COUNT DIVERGED_FNORM_NAN = SNES_DIVERGED_FNORM_NAN DIVERGED_MAX_IT = SNES_DIVERGED_MAX_IT DIVERGED_LINE_SEARCH = SNES_DIVERGED_LINE_SEARCH DIVERGED_INNER = SNES_DIVERGED_INNER DIVERGED_LOCAL_MIN = SNES_DIVERGED_LOCAL_MIN # -------------------------------------------------------------------- cdef class SNES(Object): Type = SNESType NormSchedule = SNESNormSchedule ConvergedReason = SNESConvergedReason # --- xxx --- def __cinit__(self): self.obj = &self.snes self.snes = NULL # --- xxx --- def view(self, Viewer viewer=None): cdef PetscViewer cviewer = NULL if viewer is not None: cviewer = viewer.vwr CHKERR( SNESView(self.snes, cviewer) ) def destroy(self): CHKERR( SNESDestroy(&self.snes) ) return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscSNES newsnes = NULL CHKERR( SNESCreate(ccomm, &newsnes) ) PetscCLEAR(self.obj); self.snes = newsnes return self def setType(self, snes_type): cdef PetscSNESType cval = NULL snes_type = str2bytes(snes_type, &cval) CHKERR( SNESSetType(self.snes, cval) ) def getType(self): cdef PetscSNESType cval = NULL CHKERR( SNESGetType(self.snes, &cval) ) return bytes2str(cval) def setOptionsPrefix(self, prefix): cdef const_char *cval = NULL prefix = str2bytes(prefix, &cval) CHKERR( SNESSetOptionsPrefix(self.snes, cval) ) def getOptionsPrefix(self): cdef const_char *cval = NULL CHKERR( SNESGetOptionsPrefix(self.snes, &cval) ) return bytes2str(cval) def setFromOptions(self): CHKERR( SNESSetFromOptions(self.snes) ) # --- application context --- def setAppCtx(self, appctx): self.set_attr('__appctx__', appctx) def getAppCtx(self): return self.get_attr('__appctx__') # --- discretization space --- def getDM(self): cdef PetscDM newdm = NULL CHKERR( SNESGetDM(self.snes, &newdm) ) cdef DM dm = subtype_DM(newdm)() dm.dm = newdm PetscINCREF(dm.obj) return dm def setDM(self, DM dm not None): CHKERR( SNESSetDM(self.snes, dm.dm) ) # --- FAS --- def setFASInterpolation(self, level, Mat mat not None): cdef PetscInt clevel = asInt(level) CHKERR( SNESFASSetInterpolation(self.snes, clevel, mat.mat) ) def getFASInterpolation(self, level): cdef PetscInt clevel = asInt(level) cdef Mat mat = Mat() CHKERR( SNESFASGetInterpolation(self.snes, clevel, &mat.mat) ) PetscINCREF(mat.obj) return mat def setFASRestriction(self, level, Mat mat not None): cdef PetscInt clevel = asInt(level) CHKERR( SNESFASSetRestriction(self.snes, clevel, mat.mat) ) def getFASRestriction(self, level): cdef PetscInt clevel = asInt(level) cdef Mat mat = Mat() CHKERR( SNESFASGetRestriction(self.snes, clevel, &mat.mat) ) PetscINCREF(mat.obj) return mat def setFASInjection(self, level, Mat mat not None): cdef PetscInt clevel = asInt(level) CHKERR( SNESFASSetInjection(self.snes, clevel, mat.mat) ) def getFASInjection(self, level): cdef PetscInt clevel = asInt(level) cdef Mat mat = Mat() CHKERR( SNESFASGetInjection(self.snes, clevel, &mat.mat) ) PetscINCREF(mat.obj) return mat def setFASRScale(self, level, Vec vec not None): cdef PetscInt clevel = asInt(level) CHKERR( SNESFASSetRScale(self.snes, clevel, vec.vec) ) def setFASLevels(self, levels, comms=None): cdef PetscInt clevels = asInt(levels) cdef MPI_Comm *ccomms = NULL cdef Py_ssize_t i = 0 if comms is not None: if clevels != len(comms): raise ValueError("Must provide as many communicators as levels") CHKERR( PetscMalloc(sizeof(MPI_Comm)*clevels, &ccomms) ) try: for i, comm in enumerate(comms): ccomms[i] = def_Comm(comm, MPI_COMM_NULL) CHKERR( SNESFASSetLevels(self.snes, clevels, ccomms) ) finally: CHKERR( PetscFree(ccomms) ) else: CHKERR( SNESFASSetLevels(self.snes, clevels, ccomms) ) def getFASLevels(self): cdef PetscInt levels = 0 CHKERR( SNESFASGetLevels(self.snes, &levels) ) return toInt(levels) def getFASCycleSNES(self, level): cdef PetscInt clevel = asInt(level) cdef SNES lsnes = SNES() CHKERR( SNESFASGetCycleSNES(self.snes, clevel, &lsnes.snes) ) PetscINCREF(lsnes.obj) return lsnes def getFASCoarseSolve(self): cdef SNES smooth = SNES() CHKERR( SNESFASGetCoarseSolve(self.snes, &smooth.snes) ) PetscINCREF(smooth.obj) return smooth def getFASSmoother(self, level): cdef PetscInt clevel = asInt(level) cdef SNES smooth = SNES() CHKERR( SNESFASGetSmoother(self.snes, clevel, &smooth.snes) ) PetscINCREF(smooth.obj) return smooth def getFASSmootherDown(self, level): cdef PetscInt clevel = asInt(level) cdef SNES smooth = SNES() CHKERR( SNESFASGetSmootherDown(self.snes, clevel, &smooth.snes) ) PetscINCREF(smooth.obj) return smooth def getFASSmootherUp(self, level): cdef PetscInt clevel = asInt(level) cdef SNES smooth = SNES() CHKERR( SNESFASGetSmootherUp(self.snes, clevel, &smooth.snes) ) PetscINCREF(smooth.obj) return smooth # --- nonlinear preconditioner --- def getNPC(self): cdef SNES snes = SNES() CHKERR( SNESGetNPC(self.snes, &snes.snes) ) PetscINCREF(snes.obj) return snes def hasNPC(self): cdef PetscBool has_npc = PETSC_FALSE CHKERR( SNESHasNPC(self.snes, &has_npc) ) return has_npc def setNPC(self, SNES snes not None): CHKERR( SNESSetNPC(self.snes, snes.snes) ) # --- user Function/Jacobian routines --- def setInitialGuess(self, initialguess, args=None, kargs=None): if initialguess is not None: if args is None: args = () if kargs is None: kargs = {} context = (initialguess, args, kargs) self.set_attr('__initialguess__', context) CHKERR( SNESSetInitialGuess(self.snes, SNES_InitialGuess, context) ) else: self.set_attr('__initialguess__', None) CHKERR( SNESSetInitialGuess(self.snes, NULL, NULL) ) def getInitialGuess(self): return self.get_attr('__initialguess__') def setFunction(self, function, Vec f, args=None, kargs=None): cdef PetscVec fvec=NULL if f is not None: fvec = f.vec if function is not None: if args is None: args = () if kargs is None: kargs = {} context = (function, args, kargs) self.set_attr('__function__', context) CHKERR( SNESSetFunction(self.snes, fvec, SNES_Function, context) ) else: CHKERR( SNESSetFunction(self.snes, fvec, NULL, NULL) ) def getFunction(self): cdef Vec f = Vec() CHKERR( SNESGetFunction(self.snes, &f.vec, NULL, NULL) ) PetscINCREF(f.obj) cdef object function = self.get_attr('__function__') return (f, function) def setUpdate(self, update, args=None, kargs=None): if update is not None: if args is None: args = () if kargs is None: kargs = {} context = (update, args, kargs) self.set_attr('__update__', context) CHKERR( SNESSetUpdate(self.snes, SNES_Update) ) else: self.set_attr('__update__', None) CHKERR( SNESSetUpdate(self.snes, NULL) ) def getUpdate(self): return self.get_attr('__update__') def setJacobian(self, jacobian, Mat J, Mat P=None, args=None, kargs=None): cdef PetscMat Jmat=NULL if J is not None: Jmat = J.mat cdef PetscMat Pmat=Jmat if P is not None: Pmat = P.mat if jacobian is not None: if args is None: args = () if kargs is None: kargs = {} context = (jacobian, args, kargs) self.set_attr('__jacobian__', context) CHKERR( SNESSetJacobian(self.snes, Jmat, Pmat, SNES_Jacobian, context) ) else: CHKERR( SNESSetJacobian(self.snes, Jmat, Pmat, NULL, NULL) ) def getJacobian(self): cdef Mat J = Mat() cdef Mat P = Mat() CHKERR( SNESGetJacobian(self.snes, &J.mat, &P.mat, NULL, NULL) ) PetscINCREF(J.obj) PetscINCREF(P.obj) cdef object jacobian = self.get_attr('__jacobian__') return (J, P, jacobian) def setObjective(self, objective, args=None, kargs=None): if objective is not None: if args is None: args = () if kargs is None: kargs = {} context = (objective, args, kargs) self.set_attr('__objective__', context) CHKERR( SNESSetObjective(self.snes, SNES_Objective, context) ) else: CHKERR( SNESSetObjective(self.snes, NULL, NULL) ) def getObjective(self): CHKERR( SNESGetObjective(self.snes, NULL, NULL) ) cdef object objective = self.get_attr('__objective__') return objective def computeFunction(self, Vec x not None, Vec f not None): CHKERR( SNESComputeFunction(self.snes, x.vec, f.vec) ) def computeJacobian(self, Vec x not None, Mat J not None, Mat P=None): cdef PetscMat jmat = J.mat, pmat = J.mat if P is not None: pmat = P.mat CHKERR( SNESComputeJacobian(self.snes, x.vec, jmat, pmat) ) def computeObjective(self, Vec x not None): cdef PetscReal o = 0 CHKERR( SNESComputeObjective(self.snes, x.vec, &o) ) return toReal(o) # --- tolerances and convergence --- def setTolerances(self, rtol=None, atol=None, stol=None, max_it=None): cdef PetscReal crtol, catol, cstol crtol = catol = cstol = PETSC_DEFAULT cdef PetscInt cmaxit = PETSC_DEFAULT if rtol is not None: crtol = asReal(rtol) if atol is not None: catol = asReal(atol) if stol is not None: cstol = asReal(stol) if max_it is not None: cmaxit = asInt(max_it) CHKERR( SNESSetTolerances(self.snes, catol, crtol, cstol, cmaxit, PETSC_DEFAULT) ) def getTolerances(self): cdef PetscReal crtol=0, catol=0, cstol=0 cdef PetscInt cmaxit=0 CHKERR( SNESGetTolerances(self.snes, &catol, &crtol, &cstol, &cmaxit, NULL) ) return (toReal(crtol), toReal(catol), toReal(cstol), toInt(cmaxit)) def setNormSchedule(self, normsched): CHKERR( SNESSetNormSchedule(self.snes, normsched) ) def getNormSchedule(self): cdef PetscSNESNormSchedule normsched = SNES_NORM_NONE CHKERR( SNESGetNormSchedule(self.snes, &normsched) ) return normsched def setConvergenceTest(self, converged, args=None, kargs=None): if converged is not None: if args is None: args = () if kargs is None: kargs = {} context = (converged, args, kargs) self.set_attr('__converged__', context) CHKERR( SNESSetConvergenceTest(self.snes, SNES_Converged, context, NULL) ) else: CHKERR( SNESSetConvergenceTest(self.snes, SNESConvergedDefault, NULL, NULL) ) self.set_attr('__converged__', None) def getConvergenceTest(self): return self.get_attr('__converged__') def callConvergenceTest(self, its, xnorm, ynorm, fnorm): cdef PetscInt ival = asInt(its) cdef PetscReal rval1 = asReal(xnorm) cdef PetscReal rval2 = asReal(ynorm) cdef PetscReal rval3 = asReal(fnorm) cdef PetscSNESConvergedReason reason = SNES_CONVERGED_ITERATING CHKERR( SNESConvergenceTestCall(self.snes, ival, rval1, rval2, rval3, &reason) ) return reason def setConvergenceHistory(self, length=None, reset=False): cdef PetscReal *rdata = NULL cdef PetscInt *idata = NULL cdef PetscInt size = 1000 cdef PetscBool flag = PETSC_FALSE if length is True: pass elif length is not None: size = asInt(length) if size < 0: size = 1000 if reset: flag = PETSC_TRUE cdef object rhist = oarray_r(empty_r(size), NULL, &rdata) cdef object ihist = oarray_i(empty_i(size), NULL, &idata) self.set_attr('__history__', (rhist, ihist)) CHKERR( SNESSetConvergenceHistory(self.snes, rdata, idata, size, flag) ) def getConvergenceHistory(self): cdef PetscReal *rdata = NULL cdef PetscInt *idata = NULL cdef PetscInt size = 0 CHKERR( SNESGetConvergenceHistory(self.snes, &rdata, &idata, &size) ) cdef object rhist = array_r(size, rdata) cdef object ihist = array_i(size, idata) return (rhist, ihist) def logConvergenceHistory(self, norm, linear_its=0): cdef PetscReal rval = asReal(norm) cdef PetscInt ival = asInt(linear_its) CHKERR( SNESLogConvergenceHistory(self.snes, rval, ival) ) def setResetCounters(self, reset=True): cdef PetscBool flag = reset CHKERR( SNESSetCountersReset(self.snes, flag) ) # --- monitoring --- def setMonitor(self, monitor, args=None, kargs=None): if monitor is None: return cdef object monitorlist = self.get_attr('__monitor__') if monitorlist is None: monitorlist = [] self.set_attr('__monitor__', monitorlist) CHKERR( SNESMonitorSet(self.snes, SNES_Monitor, NULL, NULL) ) if args is None: args = () if kargs is None: kargs = {} context = (monitor, args, kargs) monitorlist.append(context) def getMonitor(self): return self.get_attr('__monitor__') def cancelMonitor(self): CHKERR( SNESMonitorCancel(self.snes) ) self.set_attr('__monitor__', None) def monitor(self, its, rnorm): cdef PetscInt ival = asInt(its) cdef PetscReal rval = asReal(rnorm) CHKERR( SNESMonitor(self.snes, ival, rval) ) # --- more tolerances --- def setMaxFunctionEvaluations(self, max_funcs): cdef PetscReal r = PETSC_DEFAULT cdef PetscInt i = PETSC_DEFAULT cdef PetscInt ival = asInt(max_funcs) CHKERR( SNESSetTolerances(self.snes, r, r, r, i, ival) ) def getMaxFunctionEvaluations(self): cdef PetscReal *r = NULL cdef PetscInt *i = NULL cdef PetscInt ival = 0 CHKERR( SNESGetTolerances(self.snes, r, r, r, i, &ival) ) return toInt(ival) def getFunctionEvaluations(self): cdef PetscInt ival = 0 CHKERR( SNESGetNumberFunctionEvals(self.snes, &ival) ) return toInt(ival) def setMaxStepFailures(self, max_fails): cdef PetscInt ival = asInt(max_fails) CHKERR( SNESSetMaxNonlinearStepFailures(self.snes, ival) ) def getMaxStepFailures(self): cdef PetscInt ival = 0 CHKERR( SNESGetMaxNonlinearStepFailures(self.snes, &ival) ) return toInt(ival) def getStepFailures(self): cdef PetscInt ival = 0 CHKERR( SNESGetNonlinearStepFailures(self.snes, &ival) ) return toInt(ival) def setMaxKSPFailures(self, max_fails): cdef PetscInt ival = asInt(max_fails) CHKERR( SNESSetMaxLinearSolveFailures(self.snes, ival) ) def getMaxKSPFailures(self): cdef PetscInt ival = 0 CHKERR( SNESGetMaxLinearSolveFailures(self.snes, &ival) ) return toInt(ival) def getKSPFailures(self): cdef PetscInt ival = 0 CHKERR( SNESGetLinearSolveFailures(self.snes, &ival) ) return toInt(ival) setMaxNonlinearStepFailures = setMaxStepFailures getMaxNonlinearStepFailures = getMaxStepFailures getNonlinearStepFailures = getStepFailures setMaxLinearSolveFailures = setMaxKSPFailures getMaxLinearSolveFailures = getMaxKSPFailures getLinearSolveFailures = getKSPFailures # --- solving --- def setUp(self): CHKERR( SNESSetUp(self.snes) ) def reset(self): CHKERR( SNESReset(self.snes) ) def solve(self, Vec b, Vec x not None): cdef PetscVec rhs = NULL if b is not None: rhs = b.vec CHKERR( SNESSolve(self.snes, rhs, x.vec) ) def setConvergedReason(self, reason): cdef PetscSNESConvergedReason eval = reason CHKERR( SNESSetConvergedReason(self.snes, eval) ) def getConvergedReason(self): cdef PetscSNESConvergedReason reason = SNES_CONVERGED_ITERATING CHKERR( SNESGetConvergedReason(self.snes, &reason) ) return reason def setIterationNumber(self, its): cdef PetscInt ival = asInt(its) CHKERR( SNESSetIterationNumber(self.snes, ival) ) def getIterationNumber(self): cdef PetscInt ival = 0 CHKERR( SNESGetIterationNumber(self.snes, &ival) ) return toInt(ival) def getLinearSolveIterations(self): cdef PetscInt ival = 0 CHKERR( SNESGetLinearSolveIterations(self.snes, &ival) ) return toInt(ival) def getRhs(self): cdef Vec vec = Vec() CHKERR( SNESGetRhs(self.snes, &vec.vec) ) PetscINCREF(vec.obj) return vec def getSolution(self): cdef Vec vec = Vec() CHKERR( SNESGetSolution(self.snes, &vec.vec) ) PetscINCREF(vec.obj) return vec def setSolution(self, Vec vec not None): CHKERR( SNESSetSolution(self.snes, vec.vec) ) def getSolutionUpdate(self): cdef Vec vec = Vec() CHKERR( SNESGetSolutionUpdate(self.snes, &vec.vec) ) PetscINCREF(vec.obj) return vec # --- linear solver --- def setKSP(self, KSP ksp not None): CHKERR( SNESSetKSP(self.snes, ksp.ksp) ) def getKSP(self): cdef KSP ksp = KSP() CHKERR( SNESGetKSP(self.snes, &ksp.ksp) ) PetscINCREF(ksp.obj) return ksp def setUseEW(self, flag=True, *targs, **kargs): cdef PetscBool bval = flag CHKERR( SNESKSPSetUseEW(self.snes, bval) ) if targs or kargs: self.setParamsEW(*targs, **kargs) def getUseEW(self): cdef PetscBool flag = PETSC_FALSE CHKERR( SNESKSPGetUseEW(self.snes, &flag) ) return flag def setParamsEW(self, version=None, rtol_0=None, rtol_max=None, gamma=None, alpha=None, alpha2=None, threshold=None): cdef PetscInt cversion = PETSC_DEFAULT cdef PetscReal crtol_0 = PETSC_DEFAULT cdef PetscReal crtol_max = PETSC_DEFAULT cdef PetscReal cgamma = PETSC_DEFAULT cdef PetscReal calpha = PETSC_DEFAULT cdef PetscReal calpha2 = PETSC_DEFAULT cdef PetscReal cthreshold = PETSC_DEFAULT if version is not None: cversion = asInt(version) if rtol_0 is not None: crtol_0 = asReal(rtol_0) if rtol_max is not None: crtol_max = asReal(rtol_max) if gamma is not None: cgamma = asReal(gamma) if alpha is not None: calpha = asReal(alpha) if alpha2 is not None: calpha2 = asReal(alpha2) if threshold is not None: cthreshold = asReal(threshold) CHKERR( SNESKSPSetParametersEW( self.snes, cversion, crtol_0, crtol_max, cgamma, calpha, calpha2, cthreshold) ) def getParamsEW(self): cdef PetscInt version=0 cdef PetscReal rtol_0=0, rtol_max=0 cdef PetscReal gamma=0, alpha=0, alpha2=0 cdef PetscReal threshold=0 CHKERR( SNESKSPGetParametersEW( self.snes, &version, &rtol_0, &rtol_max, &gamma, &alpha, &alpha2, &threshold) ) return {'version' : toInt(version), 'rtol_0' : toReal(rtol_0), 'rtol_max' : toReal(rtol_max), 'gamma' : toReal(gamma), 'alpha' : toReal(alpha), 'alpha2' : toReal(alpha2), 'threshold' : toReal(threshold),} # --- matrix free / finite diferences --- def setUseMF(self, flag=True): cdef PetscBool bval = flag CHKERR( SNESSetUseMFFD(self.snes, bval) ) def getUseMF(self): cdef PetscBool bval = PETSC_FALSE CHKERR( SNESGetUseMFFD(self.snes, &bval) ) return bval def setUseFD(self, flag=True): cdef PetscBool bval = flag CHKERR( SNESSetUseFDColoring(self.snes, bval) ) def getUseFD(self): cdef PetscBool bval = PETSC_FALSE CHKERR( SNESGetUseFDColoring(self.snes, &bval) ) return bval # --- VI --- def setVariableBounds(self, Vec xl not None, Vec xu not None): CHKERR( SNESVISetVariableBounds(self.snes, xl.vec, xu.vec) ) def getVIInactiveSet(self): cdef IS inact = IS() CHKERR( SNESVIGetInactiveSet(self.snes, &inact.iset) ) PetscINCREF(inact.obj) return inact # --- Python --- def createPython(self, context=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscSNES newsnes = NULL CHKERR( SNESCreate(ccomm, &newsnes) ) PetscCLEAR(self.obj); self.snes = newsnes CHKERR( SNESSetType(self.snes, SNESPYTHON) ) CHKERR( SNESPythonSetContext(self.snes, context) ) return self def setPythonContext(self, context): CHKERR( SNESPythonSetContext(self.snes, context) ) def getPythonContext(self): cdef void *context = NULL CHKERR( SNESPythonGetContext(self.snes, &context) ) if context == NULL: return None else: return context def setPythonType(self, py_type): cdef const_char *cval = NULL py_type = str2bytes(py_type, &cval) CHKERR( SNESPythonSetType(self.snes, cval) ) # --- Composite --- def getCompositeSNES(self, n): cdef PetscInt cn cdef SNES snes = SNES() cn = asInt(n) CHKERR( SNESCompositeGetSNES(self.snes, cn, &snes.snes) ) PetscINCREF(snes.obj) return snes def getCompositeNumber(self): cdef PetscInt cn = 0 CHKERR( SNESCompositeGetNumber(self.snes, &cn) ) return toInt(cn) # --- application context --- property appctx: def __get__(self): return self.getAppCtx() def __set__(self, value): self.setAppCtx(value) # --- discretization space --- property dm: def __get__(self): return self.getDM() def __set__(self, value): self.setDM(value) # --- nonlinear preconditioner --- property npc: def __get__(self): return self.getNPC() def __set__(self, value): self.setNPC(value) # --- vectors --- property vec_sol: def __get__(self): return self.getSolution() property vec_upd: def __get__(self): return self.getSolutionUpdate() property vec_rhs: def __get__(self): return self.getRhs() # --- linear solver --- property ksp: def __get__(self): return self.getKSP() def __set__(self, value): self.setKSP(value) property use_ew: def __get__(self): return self.getUseEW() def __set__(self, value): self.setUseEW(value) # --- tolerances --- property rtol: def __get__(self): return self.getTolerances()[0] def __set__(self, value): self.setTolerances(rtol=value) property atol: def __get__(self): return self.getTolerances()[1] def __set__(self, value): self.setTolerances(atol=value) property stol: def __get__(self): return self.getTolerances()[2] def __set__(self, value): self.setTolerances(stol=value) property max_it: def __get__(self): return self.getTolerances()[3] def __set__(self, value): self.setTolerances(max_it=value) # --- more tolerances --- property max_funcs: def __get__(self): return self.getMaxFunctionEvaluations() def __set__(self, value): self.setMaxFunctionEvaluations(value) # --- iteration --- property its: def __get__(self): return self.getIterationNumber() def __set__(self, value): self.setIterationNumber(value) property history: def __get__(self): return self.getConvergenceHistory() # --- convergence --- property reason: def __get__(self): return self.getConvergedReason() def __set__(self, value): self.setConvergedReason(value) property iterating: def __get__(self): return self.reason == 0 property converged: def __get__(self): return self.reason > 0 property diverged: def __get__(self): return self.reason < 0 # --- matrix free / finite diferences --- property use_mf: def __get__(self): return self.getUseMF() def __set__(self, value): self.setUseMF(value) property use_fd: def __get__(self): return self.getUseFD() def __set__(self, value): self.setUseFD(value) # -------------------------------------------------------------------- del SNESType del SNESNormSchedule del SNESConvergedReason # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/TS.pyx0000644000175000001440000005720112711377604016673 0ustar dalcinlusers00000000000000# ----------------------------------------------------------------------------- class TSType(object): # native EULER = S_(TSEULER) BEULER = S_(TSBEULER) PSEUDO = S_(TSPSEUDO) CN = S_(TSCN) SUNDIALS = S_(TSSUNDIALS) RK = S_(TSRK) PYTHON = S_(TSPYTHON) THETA = S_(TSTHETA) ALPHA = S_(TSALPHA) ALPHA2 = S_(TSALPHA2) GL = S_(TSGL) SSP = S_(TSSSP) ARKIMEX = S_(TSARKIMEX) ROSW = S_(TSROSW) EIMEX = S_(TSEIMEX) MIMEX = S_(TSMIMEX) BDF = S_(TSBDF) # aliases FE = EULER BE = BEULER TH = THETA CRANK_NICOLSON = CN RUNGE_KUTTA = RK class TSProblemType(object): LINEAR = TS_LINEAR NONLINEAR = TS_NONLINEAR class TSEquationType(object): UNSPECIFIED = TS_EQ_UNSPECIFIED EXPLICIT = TS_EQ_EXPLICIT ODE_EXPLICIT = TS_EQ_ODE_EXPLICIT DAE_SEMI_EXPLICIT_INDEX1 = TS_EQ_DAE_SEMI_EXPLICIT_INDEX1 DAE_SEMI_EXPLICIT_INDEX2 = TS_EQ_DAE_SEMI_EXPLICIT_INDEX2 DAE_SEMI_EXPLICIT_INDEX3 = TS_EQ_DAE_SEMI_EXPLICIT_INDEX3 DAE_SEMI_EXPLICIT_INDEXHI = TS_EQ_DAE_SEMI_EXPLICIT_INDEXHI IMPLICIT = TS_EQ_IMPLICIT ODE_IMPLICIT = TS_EQ_ODE_IMPLICIT DAE_IMPLICIT_INDEX1 = TS_EQ_DAE_IMPLICIT_INDEX1 DAE_IMPLICIT_INDEX2 = TS_EQ_DAE_IMPLICIT_INDEX2 DAE_IMPLICIT_INDEX3 = TS_EQ_DAE_IMPLICIT_INDEX3 DAE_IMPLICIT_INDEXHI = TS_EQ_DAE_IMPLICIT_INDEXHI class TSExactFinalTime(object): UNSPECIFIED = TS_EXACTFINALTIME_UNSPECIFIED STEPOVER = TS_EXACTFINALTIME_STEPOVER INTERPOLATE = TS_EXACTFINALTIME_INTERPOLATE MATCHSTEP = TS_EXACTFINALTIME_MATCHSTEP class TSConvergedReason(object): # iterating CONVERGED_ITERATING = TS_CONVERGED_ITERATING ITERATING = TS_CONVERGED_ITERATING # converged CONVERGED_TIME = TS_CONVERGED_TIME CONVERGED_ITS = TS_CONVERGED_ITS CONVERGED_USER = TS_CONVERGED_USER CONVERGED_EVENT = TS_CONVERGED_EVENT # diverged DIVERGED_NONLINEAR_SOLVE = TS_DIVERGED_NONLINEAR_SOLVE DIVERGED_STEP_REJECTED = TS_DIVERGED_STEP_REJECTED # ----------------------------------------------------------------------------- cdef class TS(Object): Type = TSType ProblemType = TSProblemType EquationType = TSEquationType ExactFinalTime = TSExactFinalTime ExactFinalTimeOption = TSExactFinalTime ConvergedReason = TSConvergedReason # --- xxx --- def __cinit__(self): self.obj = &self.ts self.ts = NULL # --- xxx --- def view(self, Viewer viewer=None): cdef PetscViewer cviewer = NULL if viewer is not None: cviewer = viewer.vwr CHKERR( TSView(self.ts, cviewer) ) def load(self, Viewer viewer not None): CHKERR( TSLoad(self.ts, viewer.vwr) ) def destroy(self): CHKERR( TSDestroy(&self.ts) ) return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscTS newts = NULL CHKERR( TSCreate(ccomm, &newts) ) PetscCLEAR(self.obj); self.ts = newts return self def clone(self): cdef TS ts = TS() CHKERR( TSClone(self.ts, &ts.ts) ) return ts def setType(self, ts_type): cdef const_char *cval = NULL ts_type = str2bytes(ts_type, &cval) CHKERR( TSSetType(self.ts, cval) ) def getType(self): cdef PetscTSType cval = NULL CHKERR( TSGetType(self.ts, &cval) ) return bytes2str(cval) def setProblemType(self, ptype): CHKERR( TSSetProblemType(self.ts, ptype) ) def getProblemType(self): cdef PetscTSProblemType ptype = TS_NONLINEAR CHKERR( TSGetProblemType(self.ts, &ptype) ) return ptype def setEquationType(self, eqtype): CHKERR( TSSetEquationType(self.ts, eqtype) ) def getEquationType(self): cdef PetscTSEquationType eqtype = TS_EQ_UNSPECIFIED CHKERR( TSGetEquationType(self.ts, &eqtype) ) return eqtype def setOptionsPrefix(self, prefix): cdef const_char *cval = NULL prefix = str2bytes(prefix, &cval) CHKERR( TSSetOptionsPrefix(self.ts, cval) ) def getOptionsPrefix(self): cdef const_char *cval = NULL CHKERR( TSGetOptionsPrefix(self.ts, &cval) ) return bytes2str(cval) def setFromOptions(self): CHKERR( TSSetFromOptions(self.ts) ) # --- application context --- def setAppCtx(self, appctx): self.set_attr('__appctx__', appctx) def getAppCtx(self): return self.get_attr('__appctx__') # --- user RHS Function/Jacobian routines --- def setRHSFunction(self, function, Vec f=None, args=None, kargs=None): cdef PetscVec fvec=NULL if f is not None: fvec = f.vec if function is not None: if args is None: args = () if kargs is None: kargs = {} context = (function, args, kargs) self.set_attr('__rhsfunction__', context) CHKERR( TSSetRHSFunction(self.ts, fvec, TS_RHSFunction, context) ) else: CHKERR( TSSetRHSFunction(self.ts, fvec, NULL, NULL) ) def setRHSJacobian(self, jacobian, Mat J=None, Mat P=None, args=None, kargs=None): cdef PetscMat Jmat=NULL if J is not None: Jmat = J.mat cdef PetscMat Pmat=Jmat if P is not None: Pmat = P.mat if jacobian is not None: if args is None: args = () if kargs is None: kargs = {} context = (jacobian, args, kargs) self.set_attr('__rhsjacobian__', context) CHKERR( TSSetRHSJacobian(self.ts, Jmat, Pmat, TS_RHSJacobian, context) ) else: CHKERR( TSSetRHSJacobian(self.ts, Jmat, Pmat, NULL, NULL) ) def computeRHSFunction(self, t, Vec x not None, Vec f not None): cdef PetscReal time = asReal(t) CHKERR( TSComputeRHSFunction(self.ts, time, x.vec, f.vec) ) def computeRHSFunctionLinear(self, t, Vec x not None, Vec f not None): cdef PetscReal time = asReal(t) CHKERR( TSComputeRHSFunctionLinear(self.ts, time, x.vec, f.vec, NULL) ) def computeRHSJacobian(self, t, Vec x not None, Mat J not None, Mat P=None): cdef PetscReal time = asReal(t) cdef PetscMat jmat = J.mat, pmat = J.mat if P is not None: pmat = P.mat CHKERR( TSComputeRHSJacobian(self.ts, time, x.vec, jmat, pmat) ) def computeRHSJacobianConstant(self, t, Vec x not None, Mat J not None, Mat P=None): cdef PetscReal time = asReal(t) cdef PetscMat jmat = J.mat, pmat = J.mat if P is not None: pmat = P.mat CHKERR( TSComputeRHSJacobianConstant(self.ts, time, x.vec, jmat, pmat, NULL) ) def getRHSFunction(self): cdef Vec f = Vec() CHKERR( TSGetRHSFunction(self.ts, &f.vec, NULL, NULL) ) PetscINCREF(f.obj) cdef object function = self.get_attr('__rhsfunction__') return (f, function) def getRHSJacobian(self): cdef Mat J = Mat(), P = Mat() CHKERR( TSGetRHSJacobian(self.ts, &J.mat, &P.mat, NULL, NULL) ) PetscINCREF(J.obj); PetscINCREF(P.obj) cdef object jacobian = self.get_attr('__rhsjacobian__') return (J, P, jacobian) # --- user Implicit Function/Jacobian routines --- def setIFunction(self, function, Vec f=None, args=None, kargs=None): cdef PetscVec fvec=NULL if f is not None: fvec = f.vec if function is not None: if args is None: args = () if kargs is None: kargs = {} context = (function, args, kargs) self.set_attr('__ifunction__', context) CHKERR( TSSetIFunction(self.ts, fvec, TS_IFunction, context) ) else: CHKERR( TSSetIFunction(self.ts, fvec, NULL, NULL) ) def setIJacobian(self, jacobian, Mat J=None, Mat P=None, args=None, kargs=None): cdef PetscMat Jmat=NULL if J is not None: Jmat = J.mat cdef PetscMat Pmat=Jmat if P is not None: Pmat = P.mat if jacobian is not None: if args is None: args = () if kargs is None: kargs = {} context = (jacobian, args, kargs) self.set_attr('__ijacobian__', context) CHKERR( TSSetIJacobian(self.ts, Jmat, Pmat, TS_IJacobian, context) ) else: CHKERR( TSSetIJacobian(self.ts, Jmat, Pmat, NULL, NULL) ) def computeIFunction(self, t, Vec x not None, Vec xdot not None, Vec f not None, imex=False): cdef PetscReal rval = asReal(t) cdef PetscBool bval = imex CHKERR( TSComputeIFunction(self.ts, rval, x.vec, xdot.vec, f.vec, bval) ) def computeIJacobian(self, t, Vec x not None, Vec xdot not None, a, Mat J not None, Mat P=None, imex=False): cdef PetscReal rval1 = asReal(t) cdef PetscReal rval2 = asReal(a) cdef PetscBool bval = imex cdef PetscMat jmat = J.mat, pmat = J.mat if P is not None: pmat = P.mat CHKERR( TSComputeIJacobian(self.ts, rval1, x.vec, xdot.vec, rval2, jmat, pmat, bval) ) def getIFunction(self): cdef Vec f = Vec() CHKERR( TSGetIFunction(self.ts, &f.vec, NULL, NULL) ) PetscINCREF(f.obj) cdef object function = self.get_attr('__ifunction__') return (f, function) def getIJacobian(self): cdef Mat J = Mat(), P = Mat() CHKERR( TSGetIJacobian(self.ts, &J.mat, &P.mat, NULL, NULL) ) PetscINCREF(J.obj); PetscINCREF(P.obj) cdef object jacobian = self.get_attr('__ijacobian__') return (J, P, jacobian) # --- solution vector --- def setSolution(self, Vec u not None): CHKERR( TSSetSolution(self.ts, u.vec) ) def getSolution(self): cdef Vec u = Vec() CHKERR( TSGetSolution(self.ts, &u.vec) ) PetscINCREF(u.obj) return u # --- inner solver --- def getSNES(self): cdef SNES snes = SNES() CHKERR( TSGetSNES(self.ts, &snes.snes) ) PetscINCREF(snes.obj) return snes def getKSP(self): cdef KSP ksp = KSP() CHKERR( TSGetKSP(self.ts, &ksp.ksp) ) PetscINCREF(ksp.obj) return ksp # --- discretization space --- def getDM(self): cdef PetscDM newdm = NULL CHKERR( TSGetDM(self.ts, &newdm) ) cdef DM dm = subtype_DM(newdm)() dm.dm = newdm PetscINCREF(dm.obj) return dm def setDM(self, DM dm not None): CHKERR( TSSetDM(self.ts, dm.dm) ) # --- customization --- def setTime(self, t): cdef PetscReal rval = asReal(t) CHKERR( TSSetTime(self.ts, rval) ) def getTime(self): cdef PetscReal rval = 0 CHKERR( TSGetTime(self.ts, &rval) ) return toReal(rval) def getPrevTime(self): cdef PetscReal rval = 0 CHKERR( TSGetPrevTime(self.ts, &rval) ) return toReal(rval) def getSolveTime(self): cdef PetscReal rval = 0 CHKERR( TSGetSolveTime(self.ts, &rval) ) return toReal(rval) def setInitialTimeStep(self, initial_time, initial_time_step): cdef PetscReal rval1 = asReal(initial_time) cdef PetscReal rval2 = asReal(initial_time_step) CHKERR( TSSetInitialTimeStep(self.ts, rval1, rval2) ) def setTimeStep(self, time_step): cdef PetscReal rval = asReal(time_step) CHKERR( TSSetTimeStep(self.ts, rval) ) def getTimeStep(self): cdef PetscReal tstep = 0 CHKERR( TSGetTimeStep(self.ts, &tstep) ) return toReal(tstep) def setStepNumber(self, step_number): cdef PetscInt ival = asInt(step_number) CHKERR( TSSetTimeStepNumber(self.ts, ival) ) def getStepNumber(self): cdef PetscInt ival = 0 CHKERR( TSGetTimeStepNumber(self.ts, &ival) ) return toInt(ival) def setMaxTime(self, max_time): cdef PetscInt ival = 0 cdef PetscReal rval = asReal(max_time) CHKERR( TSGetDuration(self.ts, &ival, NULL) ) CHKERR( TSSetDuration(self.ts, ival, rval) ) def getMaxTime(self): cdef PetscReal rval = 0 CHKERR( TSGetDuration(self.ts, NULL, &rval) ) return toReal(rval) def setMaxSteps(self, max_steps): cdef PetscInt ival = asInt(max_steps) cdef PetscReal rval = 0 CHKERR( TSGetDuration(self.ts, NULL, &rval) ) CHKERR( TSSetDuration(self.ts, ival, rval) ) def getMaxSteps(self): cdef PetscInt ival = 0 CHKERR( TSGetDuration(self.ts, &ival, NULL) ) return toInt(ival) def setDuration(self, max_time, max_steps=None): cdef PetscInt ival = 0 cdef PetscReal rval = 0 CHKERR( TSGetDuration(self.ts, &ival, &rval) ) if max_steps is not None: ival = asInt(max_steps) if max_time is not None: rval = asReal(max_time) CHKERR( TSSetDuration(self.ts, ival, rval) ) def getDuration(self): cdef PetscInt ival = 0 cdef PetscReal rval = 0 CHKERR( TSGetDuration(self.ts, &ival, &rval) ) return (toReal(rval), toInt(ival)) def getTotalSteps(self): cdef PetscInt ival = 0 CHKERR( TSGetTotalSteps(self.ts, &ival) ) return toInt(ival) def getSNESIterations(self): cdef PetscInt n = 0 CHKERR( TSGetSNESIterations(self.ts, &n) ) return toInt(n) def getKSPIterations(self): cdef PetscInt n = 0 CHKERR( TSGetKSPIterations(self.ts, &n) ) return toInt(n) def setMaxStepRejections(self, n): cdef PetscInt rej = asInt(n) CHKERR( TSSetMaxStepRejections(self.ts, rej)) #def getMaxStepRejections(self): # cdef PetscInt n = 0 # CHKERR( TSGetMaxStepRejections(self.ts, &n)) # return toInt(n) def getStepRejections(self): cdef PetscInt n = 0 CHKERR( TSGetStepRejections(self.ts, &n) ) return toInt(n) def setMaxSNESFailures(self, n): cdef PetscInt fails = asInt(n) CHKERR( TSSetMaxSNESFailures(self.ts, fails)) #def getMaxSNESFailures(self, n): # cdef PetscInt n = 0 # CHKERR( TSGetMaxSNESFailures(self.ts, &n)) # return toInt(n) def getSNESFailures(self): cdef PetscInt n = 0 CHKERR( TSGetSNESFailures(self.ts, &n) ) return toInt(n) def setErrorIfStepFails(self, flag=True): cdef PetscBool bval = flag CHKERR( TSSetErrorIfStepFails(self.ts, bval)) def setTolerances(self, rtol=None, atol=None): cdef PetscReal rrtol = PETSC_DEFAULT cdef PetscReal ratol = PETSC_DEFAULT cdef PetscVec vrtol = NULL cdef PetscVec vatol = NULL if rtol is None: pass elif isinstance(rtol, Vec): vrtol = (rtol).vec else: rrtol = asReal(rtol) if atol is None: pass elif isinstance(atol, Vec): vatol = (atol).vec else: ratol = asReal(atol) CHKERR( TSSetTolerances(self.ts, ratol, vatol, rrtol, vrtol) ) def getTolerances(self): cdef PetscReal rrtol = PETSC_DEFAULT cdef PetscReal ratol = PETSC_DEFAULT cdef PetscVec vrtol = NULL cdef PetscVec vatol = NULL CHKERR( TSGetTolerances(self.ts, &ratol, &vatol, &rrtol, &vrtol) ) cdef object rtol = None if vrtol != NULL: rtol = ref_Vec(vrtol) else: rtol = toReal(rrtol) cdef object atol = None if vatol != NULL: atol = ref_Vec(vatol) else: atol = toReal(ratol) return (rtol, atol) def setExactFinalTime(self, option): cdef PetscTSExactFinalTimeOption oval = option CHKERR( TSSetExactFinalTime(self.ts, oval) ) def setConvergedReason(self, reason): cdef PetscTSConvergedReason cval = reason CHKERR( TSSetConvergedReason(self.ts, cval) ) def getConvergedReason(self): cdef PetscTSConvergedReason reason = TS_CONVERGED_ITERATING CHKERR( TSGetConvergedReason(self.ts, &reason) ) return reason # --- monitoring --- def setMonitor(self, monitor, args=None, kargs=None): if monitor is None: return cdef object monitorlist = self.get_attr('__monitor__') if monitorlist is None: monitorlist = [] self.set_attr('__monitor__', monitorlist) CHKERR( TSMonitorSet(self.ts, TS_Monitor, NULL, NULL) ) if args is None: args = () if kargs is None: kargs = {} context = (monitor, args, kargs) monitorlist.append(context) def getMonitor(self): return self.get_attr('__monitor__') def cancelMonitor(self): self.set_attr('__monitor__', None) CHKERR( TSMonitorCancel(self.ts) ) def monitor(self, step, time, Vec u=None): cdef PetscInt ival = asInt(step) cdef PetscReal rval = asReal(time) cdef PetscVec uvec = NULL if u is not None: uvec = u.vec if uvec == NULL: CHKERR( TSGetSolution(self.ts, &uvec) ) CHKERR( TSMonitor(self.ts, ival, rval, uvec) ) # --- solving --- def setPreStep(self, prestep, args=None, kargs=None): if prestep is not None: if args is None: args = () if kargs is None: kargs = {} context = (prestep, args, kargs) self.set_attr('__prestep__', context) CHKERR( TSSetPreStep(self.ts, TS_PreStep) ) else: self.set_attr('__prestep__', None) CHKERR( TSSetPreStep(self.ts, NULL) ) def getPreStep(self): return self.get_attr('__prestep__') def setPostStep(self, poststep, args=None, kargs=None): if poststep is not None: if args is None: args = () if kargs is None: kargs = {} context = (poststep, args, kargs) self.set_attr('__poststep__', context) CHKERR( TSSetPostStep(self.ts, TS_PostStep) ) else: self.set_attr('__poststep__', None) CHKERR( TSSetPostStep(self.ts, NULL) ) def getPostStep(self): return self.get_attr('__poststep__') def setUp(self): CHKERR( TSSetUp(self.ts) ) def reset(self): CHKERR( TSReset(self.ts) ) def step(self): CHKERR( TSStep(self.ts) ) def rollBack(self): CHKERR( TSRollBack(self.ts) ) def solve(self, Vec u not None): CHKERR( TSSolve(self.ts, u.vec) ) def interpolate(self, t, Vec u not None): cdef PetscReal rval = asReal(t) CHKERR( TSInterpolate(self.ts, rval, u.vec) ) # --- Python --- def createPython(self, context=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscTS newts = NULL CHKERR( TSCreate(ccomm, &newts) ) PetscCLEAR(self.obj); self.ts = newts CHKERR( TSSetType(self.ts, TSPYTHON) ) CHKERR( TSPythonSetContext(self.ts, context) ) return self def setPythonContext(self, context): CHKERR( TSPythonSetContext(self.ts, context) ) def getPythonContext(self): cdef void *context = NULL CHKERR( TSPythonGetContext(self.ts, &context) ) if context == NULL: return None else: return context def setPythonType(self, py_type): cdef const_char *cval = NULL py_type = str2bytes(py_type, &cval) CHKERR( TSPythonSetType(self.ts, cval) ) # --- Theta --- def setTheta(self, theta): cdef PetscReal rval = asReal(theta) CHKERR( TSThetaSetTheta(self.ts, rval) ) def getTheta(self): cdef PetscReal rval = 0 CHKERR( TSThetaGetTheta(self.ts, &rval) ) return toReal(rval) def setThetaEndpoint(self, flag=True): cdef PetscBool bval = flag CHKERR( TSThetaSetEndpoint(self.ts, bval) ) def getThetaEndpoint(self): cdef PetscBool bval = PETSC_FALSE CHKERR( TSThetaGetEndpoint(self.ts, &bval) ) return bval # --- Alpha --- def setAlphaRadius(self, radius): cdef PetscReal rval = asReal(radius) CHKERR( TSAlphaSetRadius(self.ts, rval) ) def setAlphaParams(self, alpha_m=None,alpha_f=None, gamma=None): cdef PetscReal rval1 = 0, rval2 = 0, rval3 = 0 try: CHKERR( TSAlphaGetParams(self.ts, &rval1, &rval2, &rval3) ) except PetscError: pass if alpha_m is not None: rval1 = asReal(alpha_m) if alpha_f is not None: rval2 = asReal(alpha_f) if gamma is not None: rval3 = asReal(gamma) CHKERR( TSAlphaSetParams(self.ts, rval1, rval2, rval3) ) def getAlphaParams(self): cdef PetscReal rval1 = 0, rval2 = 0, rval3 = 0 CHKERR( TSAlphaGetParams(self.ts, &rval1, &rval2, &rval3) ) return (toReal(rval1), toReal(rval2), toReal(rval3)) # --- application context --- property appctx: def __get__(self): return self.getAppCtx() def __set__(self, value): self.setAppCtx(value) # --- discretization space --- property dm: def __get__(self): return self.getDM() def __set__(self, value): self.setDM(value) # --- xxx --- property problem_type: def __get__(self): return self.getProblemType() def __set__(self, value): self.setProblemType(value) property equation_type: def __get__(self): return self.getEquationType() def __set__(self, value): self.setEquationType(value) property snes: def __get__(self): return self.getSNES() property ksp: def __get__(self): return self.getKSP() property vec_sol: def __get__(self): return self.getSolution() # --- xxx --- property time: def __get__(self): return self.getTime() def __set__(self, value): self.setTime(value) property time_step: def __get__(self): return self.getTimeStep() def __set__(self, value): self.setTimeStep(value) property step_number: def __get__(self): return self.getStepNumber() def __set__(self, value): self.setStepNumber(value) property max_time: def __get__(self): return self.getMaxTime() def __set__(self, value): self.setMaxTime(value) property max_steps: def __get__(self): return self.getMaxSteps() def __set__(self, value): self.setMaxSteps(value) # --- convergence --- property rtol: def __get__(self): return self.getTolerances()[0] def __set__(self, value): self.setTolerances(rtol=value) property atol: def __get__(self): return self.getTolerances()[1] def __set__(self, value): self.setTolerances(atol=value) property reason: def __get__(self): return self.getConvergedReason() def __set__(self, value): self.setConvergedReason(value) property iterating: def __get__(self): return self.reason == 0 property converged: def __get__(self): return self.reason > 0 property diverged: def __get__(self): return self.reason < 0 # ----------------------------------------------------------------------------- del TSType del TSProblemType del TSEquationType del TSExactFinalTime del TSConvergedReason # ----------------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/Section.pyx0000644000175000001440000002011712711377604017745 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef class Section(Object): def __cinit__(self): self.obj = &self.sec self.sec = NULL def __dealloc__(self): CHKERR( PetscSectionDestroy(&self.sec) ) self.sec = NULL def view(self, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( PetscSectionView(self.sec, vwr) ) def destroy(self): CHKERR( PetscSectionDestroy(&self.sec) ) return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscSection newsec = NULL CHKERR( PetscSectionCreate(ccomm, &newsec) ) PetscCLEAR(self.obj); self.sec = newsec return self def clone(self): cdef Section sec =
      type(self)() CHKERR( PetscSectionClone(self.sec, &sec.sec) ) return sec def setUp(self): CHKERR( PetscSectionSetUp(self.sec) ) def reset(self): CHKERR( PetscSectionReset(self.sec) ) def getNumFields(self): cdef PetscInt numFields = 0 CHKERR( PetscSectionGetNumFields(self.sec, &numFields) ) return toInt(numFields) def setNumFields(self,numFields): cdef PetscInt cnumFields = asInt(numFields) CHKERR( PetscSectionSetNumFields(self.sec, cnumFields) ) def getFieldName(self,field): cdef PetscInt cfield = asInt(field) cdef const_char *fieldName = NULL CHKERR( PetscSectionGetFieldName(self.sec,cfield,&fieldName) ) return bytes2str(fieldName) def setFieldName(self,field,fieldName): cdef PetscInt cfield = asInt(field) cdef const_char *cname = NULL fieldName = str2bytes(fieldName, &cname) CHKERR( PetscSectionSetFieldName(self.sec,cfield,cname) ) def getFieldComponents(self,field): cdef PetscInt cfield = asInt(field), cnumComp = 0 CHKERR( PetscSectionGetFieldComponents(self.sec,cfield,&cnumComp) ) return toInt(cnumComp) def setFieldComponents(self,field,numComp): cdef PetscInt cfield = asInt(field) cdef PetscInt cnumComp = asInt(numComp) CHKERR( PetscSectionSetFieldComponents(self.sec,cfield,cnumComp) ) def getChart(self): cdef PetscInt pStart = 0, pEnd = 0 CHKERR( PetscSectionGetChart(self.sec, &pStart, &pEnd) ) return toInt(pStart), toInt(pEnd) def setChart(self, pStart, pEnd): cdef PetscInt cStart = asInt(pStart) cdef PetscInt cEnd = asInt(pEnd) CHKERR( PetscSectionSetChart(self.sec, cStart, cEnd) ) def getDof(self,point): cdef PetscInt cpoint = asInt(point), cnumDof = 0 CHKERR( PetscSectionGetDof(self.sec,cpoint,&cnumDof) ) return toInt(cnumDof) def setDof(self,point,numDof): cdef PetscInt cpoint = asInt(point) cdef PetscInt cnumDof = asInt(numDof) CHKERR( PetscSectionSetDof(self.sec,cpoint,cnumDof) ) def addDof(self,point,numDof): cdef PetscInt cpoint = asInt(point) cdef PetscInt cnumDof = asInt(numDof) CHKERR( PetscSectionAddDof(self.sec,cpoint,cnumDof) ) def getFieldDof(self,point,field): cdef PetscInt cpoint = asInt(point), cnumDof = 0 cdef PetscInt cfield = asInt(field) CHKERR( PetscSectionGetFieldDof(self.sec,cpoint,cfield,&cnumDof) ) return toInt(cnumDof) def setFieldDof(self,point,field,numDof): cdef PetscInt cpoint = asInt(point) cdef PetscInt cfield = asInt(field) cdef PetscInt cnumDof = asInt(numDof) CHKERR( PetscSectionSetFieldDof(self.sec,cpoint,cfield,cnumDof) ) def addFieldDof(self,point,field,numDof): cdef PetscInt cpoint = asInt(point) cdef PetscInt cfield = asInt(field) cdef PetscInt cnumDof = asInt(numDof) CHKERR( PetscSectionAddFieldDof(self.sec,cpoint,cfield,cnumDof) ) def getConstraintDof(self,point): cdef PetscInt cpoint = asInt(point), cnumDof = 0 CHKERR( PetscSectionGetConstraintDof(self.sec,cpoint,&cnumDof) ) return toInt(cnumDof) def setConstraintDof(self,point,numDof): cdef PetscInt cpoint = asInt(point) cdef PetscInt cnumDof = asInt(numDof) CHKERR( PetscSectionSetConstraintDof(self.sec,cpoint,cnumDof) ) def addConstraintDof(self,point,numDof): cdef PetscInt cpoint = asInt(point) cdef PetscInt cnumDof = asInt(numDof) CHKERR( PetscSectionAddConstraintDof(self.sec,cpoint,cnumDof) ) def getFieldConstraintDof(self,point,field): cdef PetscInt cpoint = asInt(point), cnumDof = 0 cdef PetscInt cfield = asInt(field) CHKERR( PetscSectionGetFieldConstraintDof(self.sec,cpoint,cfield,&cnumDof) ) return toInt(cnumDof) def setFieldConstraintDof(self,point,field,numDof): cdef PetscInt cpoint = asInt(point) cdef PetscInt cfield = asInt(field) cdef PetscInt cnumDof = asInt(numDof) CHKERR( PetscSectionSetFieldConstraintDof(self.sec,cpoint,cfield,cnumDof) ) def addFieldConstraintDof(self,point,field,numDof): cdef PetscInt cpoint = asInt(point) cdef PetscInt cfield = asInt(field) cdef PetscInt cnumDof = asInt(numDof) CHKERR( PetscSectionAddFieldConstraintDof(self.sec,cpoint,cfield,cnumDof) ) def getConstraintIndices(self,point): cdef PetscInt cpoint = asInt(point) cdef PetscInt nindex = 0 cdef const_PetscInt *indices = NULL CHKERR( PetscSectionGetConstraintDof(self.sec, cpoint, &nindex) ) CHKERR( PetscSectionGetConstraintIndices(self.sec, cpoint, &indices) ) return array_i(nindex, indices) def setConstraintIndices(self,point,indices): cdef PetscInt cpoint = asInt(point) cdef PetscInt nindex = 0 cdef PetscInt *cindices = NULL indices = iarray_i(indices, &nindex, &cindices) CHKERR( PetscSectionSetConstraintDof(self.sec,cpoint,nindex) ) CHKERR( PetscSectionSetConstraintIndices(self.sec,cpoint,cindices) ) def getFieldConstraintIndices(self,point,field): cdef PetscInt cpoint = asInt(point) cdef PetscInt cfield = asInt(field) cdef PetscInt nindex = 0 cdef const_PetscInt *indices = NULL CHKERR( PetscSectionGetFieldConstraintDof(self.sec,cpoint,cfield,&nindex) ) CHKERR( PetscSectionGetFieldConstraintIndices(self.sec,cpoint,cfield,&indices) ) return array_i(nindex, indices) def setFieldConstraintIndices(self,point,field,indices): cdef PetscInt cpoint = asInt(point) cdef PetscInt cfield = asInt(field) cdef PetscInt nindex = 0 cdef PetscInt *cindices = NULL indices = iarray_i(indices, &nindex, &cindices) CHKERR( PetscSectionSetFieldConstraintDof(self.sec,cpoint,cfield,nindex) ) CHKERR( PetscSectionSetFieldConstraintIndices(self.sec,cpoint,cfield,cindices) ) def getMaxDof(self): cdef PetscInt maxDof = 0 CHKERR( PetscSectionGetMaxDof(self.sec,&maxDof) ) return toInt(maxDof) def getStorageSize(self): cdef PetscInt size = 0 CHKERR( PetscSectionGetStorageSize(self.sec,&size) ) return toInt(size) def getConstrainedStorageSize(self): cdef PetscInt size = 0 CHKERR( PetscSectionGetConstrainedStorageSize(self.sec,&size) ) return toInt(size) def getOffset(self,point): cdef PetscInt cpoint = asInt(point), offset = 0 CHKERR( PetscSectionGetOffset(self.sec,cpoint,&offset) ) return toInt(offset) def setOffset(self,point,offset): cdef PetscInt cpoint = asInt(point) cdef PetscInt coffset = asInt(offset) CHKERR( PetscSectionSetOffset(self.sec,cpoint,coffset) ) def getOffsetRange(self): cdef PetscInt oStart = 0, oEnd = 0 CHKERR( PetscSectionGetOffsetRange(self.sec,&oStart,&oEnd) ) return toInt(oStart),toInt(oEnd) def createGlobalSection(self, SF sf not None): cdef Section gsec = Section() CHKERR( PetscSectionCreateGlobalSection(self.sec,sf.sf,PETSC_FALSE,PETSC_FALSE,&gsec.sec) ) return gsec petsc4py-3.7.0/src/PETSc/CAPI.pyx0000644000175000001440000001451212711377604017057 0ustar dalcinlusers00000000000000#--------------------------------------------------------------------- cdef inline int setref(void *d, void *s) except -1: cdef PetscObject *dest = d cdef PetscObject source = s CHKERR( PetscINCREF(&source) ) dest[0] = source return 0 #--------------------------------------------------------------------- # -- Error -- cdef api int PyPetscError_Set(int ierr): return SETERR(ierr) # -- Comm -- cdef api object PyPetscComm_New(MPI_Comm arg): cdef Comm retv = Comm() retv.comm = arg return retv cdef api MPI_Comm PyPetscComm_Get(object arg) except *: cdef MPI_Comm retv = MPI_COMM_NULL cdef Comm ob = arg retv = ob.comm return retv cdef api MPI_Comm* PyPetscComm_GetPtr(object arg) except NULL: cdef MPI_Comm *retv = NULL cdef Comm ob = arg retv = &ob.comm return retv # -- Object -- cdef api object PyPetscObject_New(PetscObject arg): cdef Object retv = subtype_Object(arg)() setref(&retv.obj[0], arg) return retv cdef api PetscObject PyPetscObject_Get(object arg) except ? NULL: cdef PetscObject retv = NULL cdef Object ob = arg retv = ob.obj[0] return retv cdef api PetscObject* PyPetscObject_GetPtr(object arg) except NULL: cdef PetscObject *retv = NULL cdef Object ob = arg retv = ob.obj return retv # -- Viewer -- cdef api object PyPetscViewer_New(PetscViewer arg): cdef Viewer retv = Viewer() setref(&retv.vwr, arg) return retv cdef api PetscViewer PyPetscViewer_Get(object arg) except ? NULL: cdef PetscViewer retv = NULL cdef Viewer ob = arg retv = ob.vwr return retv # -- Random -- cdef api object PyPetscRandom_New(PetscRandom arg): cdef Random retv = Random() setref(&retv.rnd, arg) return retv cdef api PetscRandom PyPetscRandom_Get(object arg) except ? NULL: cdef PetscRandom retv = NULL cdef Random ob = arg retv = ob.rnd return retv # -- IS -- cdef api object PyPetscIS_New(PetscIS arg): cdef IS retv = IS() setref(&retv.iset, arg) return retv cdef api PetscIS PyPetscIS_Get(object arg) except? NULL: cdef PetscIS retv = NULL cdef IS ob = arg retv = ob.iset return retv # -- LGMap -- cdef api object PyPetscLGMap_New(PetscLGMap arg): cdef LGMap retv = LGMap() setref(&retv.lgm, arg) return retv cdef api PetscLGMap PyPetscLGMap_Get(object arg) except ? NULL: cdef PetscLGMap retv = NULL cdef LGMap ob = arg retv = ob.lgm return retv # -- SF -- cdef api object PyPetscSF_New(PetscSF arg): cdef SF retv = SF() setref(&retv.sf, arg) return retv cdef api PetscSF PyPetscSF_Get(object arg) except? NULL: cdef PetscSF retv = NULL cdef SF ob = arg retv = ob.sf return retv # -- Vec -- cdef api object PyPetscVec_New(PetscVec arg): cdef Vec retv = Vec() setref(&retv.vec, arg) return retv cdef api PetscVec PyPetscVec_Get(object arg) except ? NULL: cdef PetscVec retv = NULL cdef Vec ob = arg retv = ob.vec return retv # -- Scatter -- cdef api object PyPetscScatter_New(PetscScatter arg): cdef Scatter retv = Scatter() setref(&retv.sct, arg) return retv cdef api PetscScatter PyPetscScatter_Get(object arg) except ? NULL: cdef PetscScatter retv = NULL cdef Scatter ob = arg retv = ob.sct return retv # -- Section -- cdef api object PyPetscSection_New(PetscSection arg): cdef Section retv = Section() setref(&retv.sec, arg) return retv cdef api PetscSection PyPetscSection_Get(object arg) except ? NULL: cdef PetscSection retv = NULL cdef Section ob = arg retv = ob.sec return retv # -- Mat -- cdef api object PyPetscMat_New(PetscMat arg): cdef Mat retv = Mat() setref(&retv.mat, arg) return retv cdef api PetscMat PyPetscMat_Get(object arg) except ? NULL: cdef PetscMat retv = NULL cdef Mat ob = arg retv = ob.mat return retv # -- PC -- cdef api object PyPetscPC_New(PetscPC arg): cdef PC retv = PC() setref(&retv.pc, arg) return retv cdef api PetscPC PyPetscPC_Get(object arg) except ? NULL: cdef PetscPC retv = NULL cdef PC ob = arg retv = ob.pc return retv # -- KSP -- cdef api object PyPetscKSP_New(PetscKSP arg): cdef KSP retv = KSP() setref(&retv.ksp, arg) return retv cdef api PetscKSP PyPetscKSP_Get(object arg) except ? NULL: cdef PetscKSP retv = NULL cdef KSP ob = arg retv = ob.ksp return retv # -- SNES -- cdef api object PyPetscSNES_New(PetscSNES arg): cdef SNES retv = SNES() setref(&retv.snes, arg) return retv cdef api PetscSNES PyPetscSNES_Get(object arg) except ? NULL: cdef PetscSNES retv = NULL cdef SNES ob = arg retv = ob.snes return retv # -- TS -- cdef api object PyPetscTS_New(PetscTS arg): cdef TS retv = TS() setref(&retv.ts, arg) return retv cdef api PetscTS PyPetscTS_Get(object arg) except ? NULL: cdef PetscTS retv = NULL cdef TS ob = arg retv = ob.ts return retv # -- TAO -- cdef api object PyPetscTAO_New(PetscTAO arg): cdef TAO retv = TAO() setref(&retv.tao, arg) return retv cdef api PetscTAO PyPetscTAO_Get(object arg) except ? NULL: cdef PetscTAO retv = NULL cdef TAO ob = arg retv = ob.tao return retv # -- AO -- cdef api object PyPetscAO_New(PetscAO arg): cdef AO retv = AO() setref(&retv.ao, arg) return retv cdef api PetscAO PyPetscAO_Get(object arg) except ? NULL: cdef PetscAO retv = NULL cdef AO ob = arg retv = ob.ao return retv # -- DM -- cdef api object PyPetscDM_New(PetscDM arg): cdef DM retv = subtype_DM(arg)() setref(&retv.dm, arg) return retv cdef api PetscDM PyPetscDM_Get(object arg) except ? NULL: cdef PetscDM retv = NULL cdef DM ob = arg retv = ob.dm return retv # -- Partitioner -- cdef api object PyPetscPartitioner_New(PetscPartitioner arg): cdef Partitioner retv = Partitioner() setref(&retv.part, arg) return retv cdef api PetscPartitioner PyPetscPartitioner_Get(object arg) except ? NULL: cdef PetscPartitioner retv = NULL cdef Partitioner ob = arg retv = ob.part return retv #--------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/Comm.pyx0000644000175000001440000000737212711377604017244 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef class Comm: # def __cinit__(self, comm=None): self.comm = def_Comm(comm, MPI_COMM_NULL) self.isdup = 0 if self.comm != MPI_COMM_NULL: self.base = comm else: self.base = None def __dealloc__(self): if self.isdup: CHKERR( PetscCommDEALLOC(&self.comm) ) self.comm = MPI_COMM_NULL self.isdup = 0 self.base = None def __richcmp__(self, other, int op): if not isinstance(self, Comm): return NotImplemented if not isinstance(other, Comm): return NotImplemented if op!=2 and op!=3: raise TypeError("only '==' and '!='") cdef Comm s = self cdef Comm o = other cdef int eq = (op == 2) cdef MPI_Comm comm1 = s.comm cdef MPI_Comm comm2 = o.comm cdef int flag = 0 if comm1 != MPI_COMM_NULL and comm2 != MPI_COMM_NULL: CHKERR( MPI_Comm_compare(comm1, comm2, &flag) ) if eq: return (flag==MPI_IDENT or flag==MPI_CONGRUENT) else: return (flag!=MPI_IDENT and flag!=MPI_CONGRUENT) else: if eq: return (comm1 == comm2) else: return (comm1 != comm2) def __nonzero__(self): return self.comm != MPI_COMM_NULL # def destroy(self): if self.comm == MPI_COMM_NULL: return if not self.isdup: raise ValueError("communicator not owned") CHKERR( PetscCommDestroy(&self.comm) ) self.comm = MPI_COMM_NULL self.isdup = 0 self.base = None def duplicate(self): if self.comm == MPI_COMM_NULL: raise ValueError("null communicator") cdef MPI_Comm newcomm = MPI_COMM_NULL CHKERR( PetscCommDuplicate(self.comm, &newcomm, NULL) ) cdef Comm comm = type(self)() comm.comm = newcomm comm.isdup = 1 comm.base = self.base return comm def getSize(self): if self.comm == MPI_COMM_NULL: raise ValueError("null communicator") cdef int size=0 MPI_Comm_size(self.comm, &size) return size def getRank(self): if self.comm == MPI_COMM_NULL: raise ValueError("null communicator") cdef int rank=0 MPI_Comm_rank(self.comm, &rank) return rank def barrier(self): if self.comm == MPI_COMM_NULL: raise ValueError("null communicator") MPI_Barrier(self.comm) # --- properties --- property size: def __get__(self): return self.getSize() property rank: def __get__(self): return self.getRank() # --- Fortran support --- property fortran: def __get__(self): cdef MPI_Comm comm = self.comm return MPI_Comm_c2f(comm) # --- mpi4py support --- def tompi4py(self): cdef MPI_Comm comm = self.comm return mpi4py_Comm_New(comm) # --- mpi4py compatibility API --- Free = destroy Clone = duplicate Dup = duplicate Get_size = getSize Get_rank = getRank Barrier = barrier # -------------------------------------------------------------------- cdef Comm __COMM_NULL__ = Comm() cdef Comm __COMM_SELF__ = Comm() cdef Comm __COMM_WORLD__ = Comm() COMM_NULL = __COMM_NULL__ COMM_SELF = __COMM_SELF__ COMM_WORLD = __COMM_WORLD__ # -------------------------------------------------------------------- cdef MPI_Comm PETSC_COMM_DEFAULT = MPI_COMM_NULL cdef MPI_Comm GetComm(object comm, MPI_Comm defv) except *: return def_Comm(comm, defv) cdef MPI_Comm GetCommDefault(): return PETSC_COMM_DEFAULT # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscao.pxi0000644000175000001440000000163412711377604017762 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef char* PetscAOType "const char*" PetscAOType AOBASIC PetscAOType AOADVANCED PetscAOType AOMAPPING PetscAOType AOMEMORYSCALABLE int AOView(PetscAO,PetscViewer) int AODestroy(PetscAO*) int AOCreateBasic(MPI_Comm,PetscInt,const_PetscInt[],const_PetscInt[],PetscAO*) int AOCreateBasicIS(PetscIS,PetscIS,PetscAO*) int AOCreateMemoryScalable(MPI_Comm,PetscInt,const_PetscInt[],const_PetscInt[],PetscAO*) int AOCreateMemoryScalableIS(PetscIS,PetscIS,PetscAO*) int AOCreateMapping(MPI_Comm,PetscInt,const_PetscInt[],const_PetscInt[],PetscAO*) int AOCreateMappingIS(PetscIS,PetscIS,PetscAO*) int AOGetType(PetscAO,PetscAOType*) int AOApplicationToPetsc(PetscAO,PetscInt,PetscInt[]) int AOApplicationToPetscIS(PetscAO,PetscIS) int AOPetscToApplication(PetscAO,PetscInt,PetscInt[]) int AOPetscToApplicationIS(PetscAO,PetscIS) petsc4py-3.7.0/src/PETSc/AO.pyx0000644000175000001440000001054212711377604016641 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class AOType(object): BASIC = S_(AOBASIC) ADVANCED = S_(AOADVANCED) MAPPING = S_(AOMAPPING) MEMORYSCALABLE = S_(AOMEMORYSCALABLE) # -------------------------------------------------------------------- cdef class AO(Object): Type = AOType def __cinit__(self): self.obj = &self.ao self.ao = NULL def view(self, Viewer viewer=None): cdef PetscViewer cviewer = NULL if viewer is not None: cviewer = viewer.vwr CHKERR( AOView(self.ao, cviewer) ) def destroy(self): CHKERR( AODestroy(&self.ao) ) return self def createBasic(self, app, petsc=None, comm=None): cdef PetscIS isapp = NULL, ispetsc = NULL cdef PetscInt napp = 0, *idxapp = NULL, cdef PetscInt npetsc = 0, *idxpetsc = NULL cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscAO newao = NULL if isinstance(app, IS): isapp = (app).iset if petsc is not None: ispetsc = (petsc).iset CHKERR( AOCreateBasicIS(isapp, ispetsc, &newao) ) else: app = iarray_i(app, &napp, &idxapp) if petsc is not None: petsc = iarray_i(petsc, &npetsc, &idxpetsc) assert napp == npetsc, "incompatible array sizes" CHKERR( AOCreateBasic(ccomm, napp, idxapp, idxpetsc, &newao) ) PetscCLEAR(self.obj); self.ao = newao return self def createMemoryScalable(self, app, petsc=None, comm=None): cdef PetscIS isapp = NULL, ispetsc = NULL cdef PetscInt napp = 0, *idxapp = NULL, cdef PetscInt npetsc = 0, *idxpetsc = NULL cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscAO newao = NULL if isinstance(app, IS): isapp = (app).iset if petsc is not None: ispetsc = (petsc).iset CHKERR( AOCreateMemoryScalableIS(isapp, ispetsc, &newao) ) else: app = iarray_i(app, &napp, &idxapp) if petsc is not None: petsc = iarray_i(petsc, &npetsc, &idxpetsc) assert napp == npetsc, "incompatible array sizes" CHKERR( AOCreateMemoryScalable(ccomm, napp, idxapp, idxpetsc, &newao) ) PetscCLEAR(self.obj); self.ao = newao return self def createMapping(self, app, petsc=None, comm=None): cdef PetscIS isapp = NULL, ispetsc = NULL cdef PetscInt napp = 0, *idxapp = NULL, cdef PetscInt npetsc = 0, *idxpetsc = NULL cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscAO newao = NULL if isinstance(app, IS): isapp = (app).iset if petsc is not None: ispetsc = (petsc).iset CHKERR( AOCreateMappingIS(isapp, ispetsc, &newao) ) else: app = iarray_i(app, &napp, &idxapp) if petsc is not None: petsc = iarray_i(petsc, &npetsc, &idxpetsc) assert napp == npetsc, "incompatible array sizes" CHKERR( AOCreateMapping(ccomm, napp, idxapp, idxpetsc, &newao) ) PetscCLEAR(self.obj); self.ao = newao return self def getType(self): cdef PetscAOType cval = NULL CHKERR( AOGetType(self.ao, &cval) ) return bytes2str(cval) def app2petsc(self, indices): cdef PetscIS iset = NULL cdef PetscInt nidx = 0, *idx = NULL if isinstance(indices, IS): iset = (indices).iset CHKERR( AOApplicationToPetscIS(self.ao, iset) ) else: indices = oarray_i(indices, &nidx, &idx) CHKERR( AOApplicationToPetsc(self.ao, nidx, idx) ) return indices def petsc2app(self, indices): cdef PetscIS iset = NULL cdef PetscInt nidx = 0, *idx = NULL if isinstance(indices, IS): iset = (indices).iset CHKERR( AOPetscToApplicationIS(self.ao, iset) ) else: indices = oarray_i(indices, &nidx, &idx) CHKERR( AOPetscToApplication(self.ao, nidx, idx) ) return indices # -------------------------------------------------------------------- del AOType # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/DMShell.pyx0000644000175000001440000001663012711377604017636 0ustar dalcinlusers00000000000000cdef class DMShell(DM): def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscDM newdm = NULL CHKERR( DMShellCreate(ccomm, &newdm) ) PetscCLEAR(self.obj); self.dm = newdm return self def setMatrix(self, Mat mat not None): CHKERR( DMShellSetMatrix(self.dm, mat.mat) ) def setGlobalVector(self, Vec gv not None): CHKERR( DMShellSetGlobalVector(self.dm, gv.vec) ) def setLocalVector(self, Vec lv not None): CHKERR( DMShellSetLocalVector(self.dm, lv.vec) ) def setCreateGlobalVector(self, create_gvec, args=None, kargs=None): if create_gvec is not None: if args is None: args = () if kargs is None: kargs = {} context = (create_gvec, args, kargs) self.set_attr('__create_global_vector__', context) CHKERR( DMShellSetCreateGlobalVector(self.dm, DMSHELL_CreateGlobalVector) ) else: CHKERR( DMShellSetCreateGlobalVector(self.dm, NULL) ) def setCreateLocalVector(self, create_lvec, args=None, kargs=None): if create_lvec is not None: if args is None: args = () if kargs is None: kargs = {} context = (create_lvec, args, kargs) self.set_attr('__create_local_vector__', context) CHKERR( DMShellSetCreateLocalVector(self.dm, DMSHELL_CreateLocalVector) ) else: CHKERR( DMShellSetCreateLocalVector(self.dm, NULL) ) def setGlobalToLocal(self, begin, end, begin_args=None, begin_kargs=None, end_args=None, end_kargs=None): cdef PetscDMShellXToYFunction cbegin = NULL, cend = NULL if begin is not None: if begin_args is None: begin_args = () if begin_kargs is None: begin_kargs = {} context = (begin, begin_args, begin_kargs) self.set_attr('__g2l_begin__', context) cbegin = &DMSHELL_GlobalToLocalBegin if end is not None: if end_args is None: end_args = () if end_kargs is None: end_kargs = {} context = (end, end_args, end_kargs) self.set_attr('__g2l_end__', context) cend = &DMSHELL_GlobalToLocalEnd CHKERR( DMShellSetGlobalToLocal(self.dm, cbegin, cend) ) def setGlobalToLocalVecScatter(self, Scatter gtol not None): CHKERR( DMShellSetGlobalToLocalVecScatter(self.dm, gtol.sct) ) def setLocalToGlobal(self, begin, end, begin_args=None, begin_kargs=None, end_args=None, end_kargs=None): cdef PetscDMShellXToYFunction cbegin = NULL, cend = NULL if begin is not None: if begin_args is None: begin_args = () if begin_kargs is None: begin_kargs = {} context = (begin, begin_args, begin_kargs) self.set_attr('__l2g_begin__', context) cbegin = &DMSHELL_LocalToGlobalBegin if end is not None: if end_args is None: end_args = () if end_kargs is None: end_kargs = {} context = (end, end_args, end_kargs) self.set_attr('__l2g_end__', context) cend = &DMSHELL_LocalToGlobalEnd CHKERR( DMShellSetLocalToGlobal(self.dm, cbegin, cend) ) def setLocalToGlobalVecScatter(self, Scatter ltog not None): CHKERR( DMShellSetLocalToGlobalVecScatter(self.dm, ltog.sct) ) def setLocalToLocal(self, begin, end, begin_args=None, begin_kargs=None, end_args=None, end_kargs=None): cdef PetscDMShellXToYFunction cbegin = NULL, cend = NULL cbegin = NULL cend = NULL if begin is not None: if begin_args is None: begin_args = () if begin_kargs is None: begin_kargs = {} context = (begin, begin_args, begin_kargs) self.set_attr('__l2l_begin__', context) cbegin = &DMSHELL_LocalToLocalBegin if end is not None: if end_args is None: end_args = () if end_kargs is None: end_kargs = {} context = (end, end_args, end_kargs) self.set_attr('__l2l_end__', context) cend = &DMSHELL_LocalToLocalEnd CHKERR( DMShellSetLocalToLocal(self.dm, cbegin, cend) ) def setLocalToLocalVecScatter(self, Scatter ltol not None): CHKERR( DMShellSetLocalToLocalVecScatter(self.dm, ltol.sct) ) def setCreateMatrix(self, create_matrix, args=None, kargs=None): if create_matrix is not None: if args is None: args = () if kargs is None: kargs = {} context = (create_matrix, args, kargs) self.set_attr('__create_matrix__', context) CHKERR( DMShellSetCreateMatrix(self.dm, DMSHELL_CreateMatrix) ) else: CHKERR( DMShellSetCreateMatrix(self.dm, NULL) ) def setCoarsen(self, coarsen, args=None, kargs=None): if coarsen is not None: if args is None: args = () if kargs is None: kargs = {} context = (coarsen, args, kargs) self.set_attr('__coarsen__', context) CHKERR( DMShellSetCoarsen(self.dm, DMSHELL_Coarsen) ) else: CHKERR( DMShellSetCoarsen(self.dm, NULL) ) def setRefine(self, refine, args=None, kargs=None): if refine is not None: if args is None: args = () if kargs is None: kargs = {} context = (refine, args, kargs) self.set_attr('__refine__', context) CHKERR( DMShellSetRefine(self.dm, DMSHELL_Refine) ) else: CHKERR( DMShellSetRefine(self.dm, NULL) ) def setCreateInterpolation(self, create_interpolation, args=None, kargs=None): if create_interpolation is not None: if args is None: args = () if kargs is None: kargs = {} context = (create_interpolation, args, kargs) self.set_attr('__create_interpolation__', context) CHKERR( DMShellSetCreateInterpolation(self.dm, DMSHELL_CreateInterpolation) ) else: CHKERR( DMShellSetCreateInterpolation(self.dm, NULL) ) def setCreateInjection(self, create_injection, args=None, kargs=None): if create_injection is not None: if args is None: args = () if kargs is None: kargs = {} context = (create_injection, args, kargs) self.set_attr('__create_injection__', context) CHKERR( DMShellSetCreateInjection(self.dm, DMSHELL_CreateInjection) ) else: CHKERR( DMShellSetCreateInjection(self.dm, NULL) ) def setCreateFieldDecomposition(self, decomp, args=None, kargs=None): if decomp is not None: if args is None: args = () if kargs is None: kargs = {} context = (decomp, args, kargs) self.set_attr('__create_field_decomp__', context) CHKERR( DMShellSetCreateFieldDecomposition(self.dm, DMSHELL_CreateFieldDecomposition) ) else: CHKERR( DMShellSetCreateFieldDecomposition(self.dm, NULL) ) def setCreateSubDM(self, create_subdm, args=None, kargs=None): if create_subdm is not None: if args is None: args = () if kargs is None: kargs = {} context = (create_subdm, args, kargs) self.set_attr('__create_subdm__', context) CHKERR( DMShellSetCreateSubDM(self.dm, DMSHELL_CreateSubDM) ) else: CHKERR( DMShellSetCreateSubDM(self.dm, NULL) ) petsc4py-3.7.0/src/PETSc/arraynpy.pxi0000644000175000001440000001550412711377604020172 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from "petsc4py/numpy.h": int import_array "_import_array" () except -1 ctypedef long npy_intp ctypedef extern class numpy.dtype [object PyArray_Descr]: pass ctypedef extern class numpy.ndarray [object PyArrayObject]: pass void* PyArray_DATA(ndarray) npy_intp PyArray_SIZE(ndarray) int PyArray_NDIM(ndarray) npy_intp* PyArray_DIMS(ndarray) npy_intp PyArray_DIM(ndarray, int) enum: NPY_INTP dtype PyArray_DescrFromType(int) object PyArray_TypeObjectFromType(int) enum: NPY_ARRAY_ALIGNED enum: NPY_ARRAY_WRITEABLE enum: NPY_ARRAY_NOTSWAPPED enum: NPY_ARRAY_CARRAY enum: NPY_ARRAY_FARRAY ndarray PyArray_FROM_O(object) ndarray PyArray_FROM_OT(object,int) ndarray PyArray_FROM_OTF(object,int,int) ndarray PyArray_Copy(ndarray) ndarray PyArray_ArangeObj(object,object,object,dtype) ndarray PyArray_EMPTY(int,npy_intp[],int,int) ndarray PyArray_ZEROS(int,npy_intp[],int,int) bint PyArray_ISCONTIGUOUS(ndarray) bint PyArray_ISFORTRAN(ndarray) ctypedef enum NPY_ORDER: NPY_ANYORDER NPY_CORDER NPY_FORTRANORDER ndarray PyArray_NewCopy(ndarray,NPY_ORDER) ctypedef struct PyObject ctypedef struct PyTypeObject PyObject* PyArray_New(PyTypeObject*,int,npy_intp[],int,npy_intp[],void*,int,int,PyObject*) cdef extern from "petsc4py/numpy.h": enum: NPY_INT enum: NPY_DOUBLE enum: NPY_PETSC_INT enum: NPY_PETSC_REAL enum: NPY_PETSC_SCALAR enum: NPY_PETSC_COMPLEX # -------------------------------------------------------------------- cdef inline ndarray asarray(object ob): return PyArray_FROM_O(ob) cdef inline ndarray arange(start, stop, stride): cdef dtype descr = PyArray_DescrFromType(NPY_PETSC_INT) return PyArray_ArangeObj(start, stop, stride, descr) # -------------------------------------------------------------------- cdef inline ndarray empty_i(PetscInt size): cdef npy_intp s = size return PyArray_EMPTY(1, &s, NPY_PETSC_INT, 0) cdef inline ndarray empty_r(PetscInt size): cdef npy_intp s = size return PyArray_EMPTY(1, &s, NPY_PETSC_REAL, 0) cdef inline ndarray empty_s(PetscInt size): cdef npy_intp s = size return PyArray_EMPTY(1, &s, NPY_PETSC_SCALAR, 0) cdef inline ndarray empty_c(PetscInt size): cdef npy_intp s = size return PyArray_EMPTY(1, &s, NPY_PETSC_COMPLEX, 0) cdef inline ndarray empty_p(PetscInt size): cdef npy_intp s = size return PyArray_EMPTY(1, &s, NPY_INTP, 0) # -------------------------------------------------------------------- cdef inline ndarray array_i(PetscInt size, const_PetscInt* data): cdef npy_intp s = size cdef ndarray ary = PyArray_EMPTY(1, &s, NPY_PETSC_INT, 0) if data != NULL: memcpy(PyArray_DATA(ary), data, size*sizeof(PetscInt)) return ary cdef inline ndarray array_r(PetscInt size, const_PetscReal* data): cdef npy_intp s = size cdef ndarray ary = PyArray_EMPTY(1, &s, NPY_PETSC_REAL, 0) if data != NULL: memcpy(PyArray_DATA(ary), data, size*sizeof(PetscReal)) return ary cdef inline ndarray array_s(PetscInt size, const_PetscScalar* data): cdef npy_intp s = size cdef ndarray ary = PyArray_EMPTY(1, &s, NPY_PETSC_SCALAR, 0) if data != NULL: memcpy(PyArray_DATA(ary), data, size*sizeof(PetscScalar)) return ary # -------------------------------------------------------------------- cdef inline ndarray iarray(object ob, int typenum): cdef ndarray ary = PyArray_FROM_OTF( ob, typenum, NPY_ARRAY_ALIGNED|NPY_ARRAY_NOTSWAPPED) if PyArray_ISCONTIGUOUS(ary): return ary if PyArray_ISFORTRAN(ary): return ary return PyArray_Copy(ary) cdef inline ndarray iarray_i(object ob, PetscInt* size, PetscInt** data): cdef ndarray ary = iarray(ob, NPY_PETSC_INT) if size != NULL: size[0] = PyArray_SIZE(ary) if data != NULL: data[0] = PyArray_DATA(ary) return ary cdef inline ndarray iarray_r(object ob, PetscInt* size, PetscReal** data): cdef ndarray ary = iarray(ob, NPY_PETSC_REAL) if size != NULL: size[0] = PyArray_SIZE(ary) if data != NULL: data[0] = PyArray_DATA(ary) return ary cdef inline ndarray iarray_s(object ob, PetscInt* size, PetscScalar** data): cdef ndarray ary = iarray(ob, NPY_PETSC_SCALAR) if size != NULL: size[0] = PyArray_SIZE(ary) if data != NULL: data[0] = PyArray_DATA(ary) return ary # -------------------------------------------------------------------- cdef inline ndarray oarray(object ob, int typenum): cdef ndarray ary = PyArray_FROM_OTF( ob, typenum, NPY_ARRAY_ALIGNED|NPY_ARRAY_WRITEABLE|NPY_ARRAY_NOTSWAPPED) if PyArray_ISCONTIGUOUS(ary): return ary if PyArray_ISFORTRAN(ary): return ary return PyArray_Copy(ary) cdef inline ndarray oarray_i(object ob, PetscInt* size, PetscInt** data): cdef ndarray ary = oarray(ob, NPY_PETSC_INT) if size != NULL: size[0] = PyArray_SIZE(ary) if data != NULL: data[0] = PyArray_DATA(ary) return ary cdef inline ndarray oarray_r(object ob, PetscInt* size, PetscReal** data): cdef ndarray ary = oarray(ob, NPY_PETSC_REAL) if size != NULL: size[0] = PyArray_SIZE(ary) if data != NULL: data[0] = PyArray_DATA(ary) return ary cdef inline ndarray oarray_s(object ob, PetscInt* size, PetscScalar** data): cdef ndarray ary = oarray(ob, NPY_PETSC_SCALAR) if size != NULL: size[0] = PyArray_SIZE(ary) if data != NULL: data[0] = PyArray_DATA(ary) return ary cdef inline ndarray oarray_p(object ob, PetscInt* size, void** data): cdef ndarray ary = oarray(ob, NPY_INTP) if size != NULL: size[0] = PyArray_SIZE(ary) if data != NULL: data[0] = PyArray_DATA(ary) return ary # -------------------------------------------------------------------- cdef inline ndarray ocarray_s(object ob, PetscInt* size, PetscScalar** data): cdef ndarray ary = PyArray_FROM_OTF( ob, NPY_PETSC_SCALAR, NPY_ARRAY_CARRAY|NPY_ARRAY_NOTSWAPPED) if size != NULL: size[0] = PyArray_SIZE(ary) if data != NULL: data[0] = PyArray_DATA(ary) return ary cdef inline ndarray ofarray_s(object ob, PetscInt* size, PetscScalar** data): cdef ndarray ary = PyArray_FROM_OTF( ob, NPY_PETSC_SCALAR, NPY_ARRAY_FARRAY|NPY_ARRAY_NOTSWAPPED) if size != NULL: size[0] = PyArray_SIZE(ary) if data != NULL: data[0] = PyArray_DATA(ary) return ary # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscts.pxi0000644000175000001440000002652712711377604020021 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef char* PetscTSType "const char*" PetscTSType TSEULER PetscTSType TSBEULER PetscTSType TSPSEUDO PetscTSType TSCN PetscTSType TSSUNDIALS PetscTSType TSRK #PetscTSType TSPYTHON PetscTSType TSTHETA PetscTSType TSALPHA PetscTSType TSALPHA2 PetscTSType TSGL PetscTSType TSSSP PetscTSType TSARKIMEX PetscTSType TSROSW PetscTSType TSEIMEX PetscTSType TSMIMEX PetscTSType TSBDF ctypedef enum PetscTSProblemType "TSProblemType": TS_LINEAR TS_NONLINEAR ctypedef enum PetscTSEquationType "TSEquationType": TS_EQ_UNSPECIFIED TS_EQ_EXPLICIT TS_EQ_ODE_EXPLICIT TS_EQ_DAE_SEMI_EXPLICIT_INDEX1 TS_EQ_DAE_SEMI_EXPLICIT_INDEX2 TS_EQ_DAE_SEMI_EXPLICIT_INDEX3 TS_EQ_DAE_SEMI_EXPLICIT_INDEXHI TS_EQ_IMPLICIT TS_EQ_ODE_IMPLICIT TS_EQ_DAE_IMPLICIT_INDEX1 TS_EQ_DAE_IMPLICIT_INDEX2 TS_EQ_DAE_IMPLICIT_INDEX3 TS_EQ_DAE_IMPLICIT_INDEXHI ctypedef enum PetscTSConvergedReason "TSConvergedReason": # iterating TS_CONVERGED_ITERATING # converged TS_CONVERGED_TIME TS_CONVERGED_ITS TS_CONVERGED_USER TS_CONVERGED_EVENT # diverged TS_DIVERGED_NONLINEAR_SOLVE TS_DIVERGED_STEP_REJECTED ctypedef enum PetscTSExactFinalTimeOption "TSExactFinalTimeOption": TS_EXACTFINALTIME_UNSPECIFIED TS_EXACTFINALTIME_STEPOVER TS_EXACTFINALTIME_INTERPOLATE TS_EXACTFINALTIME_MATCHSTEP ctypedef int PetscTSCtxDel(void*) ctypedef int (*PetscTSFunctionFunction)(PetscTS, PetscReal, PetscVec, PetscVec, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscTSJacobianFunction)(PetscTS, PetscReal, PetscVec, PetscMat, PetscMat, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscTSIFunctionFunction)(PetscTS, PetscReal, PetscVec, PetscVec, PetscVec, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscTSIJacobianFunction)(PetscTS, PetscReal, PetscVec, PetscVec, PetscReal, PetscMat, PetscMat, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscTSMonitorFunction)(PetscTS, PetscInt, PetscReal, PetscVec, void*) except PETSC_ERR_PYTHON ctypedef int (*PetscTSPreStepFunction) (PetscTS) except PETSC_ERR_PYTHON ctypedef int (*PetscTSPostStepFunction) (PetscTS) except PETSC_ERR_PYTHON int TSCreate(MPI_Comm comm,PetscTS*) int TSClone(PetscTS,PetscTS*) int TSDestroy(PetscTS*) int TSView(PetscTS,PetscViewer) int TSLoad(PetscTS,PetscViewer) int TSSetProblemType(PetscTS,PetscTSProblemType) int TSGetProblemType(PetscTS,PetscTSProblemType*) int TSSetEquationType(PetscTS,PetscTSEquationType) int TSGetEquationType(PetscTS,PetscTSEquationType*) int TSSetType(PetscTS,PetscTSType) int TSGetType(PetscTS,PetscTSType*) int TSSetOptionsPrefix(PetscTS,char[]) int TSAppendOptionsPrefix(PetscTS,char[]) int TSGetOptionsPrefix(PetscTS,char*[]) int TSSetFromOptions(PetscTS) int TSSetSolution(PetscTS,PetscVec) int TSGetSolution(PetscTS,PetscVec*) int TSGetSolveTime(PetscTS,PetscReal*) int TSGetRHSFunction(PetscTS,PetscVec*,PetscTSFunctionFunction*,void*) int TSGetRHSJacobian(PetscTS,PetscMat*,PetscMat*,PetscTSJacobianFunction*,void**) int TSSetRHSFunction(PetscTS,PetscVec,PetscTSFunctionFunction,void*) int TSSetRHSJacobian(PetscTS,PetscMat,PetscMat,PetscTSJacobianFunction,void*) int TSSetIFunction(PetscTS,PetscVec,PetscTSIFunctionFunction,void*) int TSSetIJacobian(PetscTS,PetscMat,PetscMat,PetscTSIJacobianFunction,void*) int TSGetIFunction(PetscTS,PetscVec*,PetscTSIFunctionFunction*,void*) int TSGetIJacobian(PetscTS,PetscMat*,PetscMat*,PetscTSIJacobianFunction*,void**) int TSGetKSP(PetscTS,PetscKSP*) int TSGetSNES(PetscTS,PetscSNES*) int TSGetDM(PetscTS,PetscDM*) int TSSetDM(PetscTS,PetscDM) int TSComputeRHSFunction(PetscTS,PetscReal,PetscVec,PetscVec) int TSComputeRHSFunctionLinear(PetscTS,PetscReal,PetscVec,PetscVec,void*) int TSComputeRHSJacobian(PetscTS,PetscReal,PetscVec,PetscMat,PetscMat) int TSComputeRHSJacobianConstant(PetscTS,PetscReal,PetscVec,PetscMat,PetscMat,void*) int TSComputeIFunction(PetscTS,PetscReal,PetscVec,PetscVec,PetscVec,PetscBool) int TSComputeIJacobian(PetscTS,PetscReal,PetscVec,PetscVec,PetscReal,PetscMat,PetscMat,PetscBool) int TSSetTime(PetscTS,PetscReal) int TSGetTime(PetscTS,PetscReal*) int TSGetPrevTime(PetscTS,PetscReal*) int TSSetInitialTimeStep(PetscTS,PetscReal,PetscReal) int TSSetTimeStep(PetscTS,PetscReal) int TSGetTimeStep(PetscTS,PetscReal*) int TSGetTimeStepNumber(PetscTS,PetscInt*) int TSSetDuration(PetscTS,PetscInt,PetscReal) int TSGetDuration(PetscTS,PetscInt*,PetscReal*) int TSSetExactFinalTime(PetscTS,PetscTSExactFinalTimeOption) int TSSetConvergedReason(PetscTS,PetscTSConvergedReason) int TSGetConvergedReason(PetscTS,PetscTSConvergedReason*) int TSGetTotalSteps(PetscTS,PetscInt*) int TSGetSNESIterations(PetscTS,PetscInt*) int TSGetKSPIterations(PetscTS,PetscInt*) int TSGetStepRejections(PetscTS,PetscInt*) int TSSetMaxStepRejections(PetscTS,PetscInt) int TSGetSNESFailures(PetscTS,PetscInt*) int TSSetMaxSNESFailures(PetscTS,PetscInt) int TSSetErrorIfStepFails(PetscTS,PetscBool) int TSSetTolerances(PetscTS,PetscReal,PetscVec,PetscReal,PetscVec) int TSGetTolerances(PetscTS,PetscReal*,PetscVec*,PetscReal*,PetscVec*) int TSMonitorSet(PetscTS,PetscTSMonitorFunction,void*,PetscTSCtxDel*) int TSMonitorCancel(PetscTS) int TSMonitor(PetscTS,PetscInt,PetscReal,PetscVec) int TSSetPreStep(PetscTS, PetscTSPreStepFunction) int TSSetPostStep(PetscTS, PetscTSPostStepFunction) int TSSetUp(PetscTS) int TSReset(PetscTS) int TSStep(PetscTS) int TSRollBack(PetscTS) int TSSolve(PetscTS,PetscVec) int TSInterpolate(PetscTS,PetscReal,PetscVec) int TSThetaSetTheta(PetscTS,PetscReal) int TSThetaGetTheta(PetscTS,PetscReal*) int TSThetaSetEndpoint(PetscTS,PetscBool) int TSThetaGetEndpoint(PetscTS,PetscBool*) int TSAlphaSetRadius(PetscTS,PetscReal) int TSAlphaSetParams(PetscTS,PetscReal,PetscReal,PetscReal) int TSAlphaGetParams(PetscTS,PetscReal*,PetscReal*,PetscReal*) cdef extern from "custom.h" nogil: int TSSetTimeStepNumber(PetscTS,PetscInt) cdef extern from "libpetsc4py.h": PetscTSType TSPYTHON int TSPythonSetContext(PetscTS,void*) int TSPythonGetContext(PetscTS,void**) int TSPythonSetType(PetscTS,char[]) # ----------------------------------------------------------------------------- cdef inline TS ref_TS(PetscTS ts): cdef TS ob = TS() ob.ts = ts PetscINCREF(ob.obj) return ob # ----------------------------------------------------------------------------- cdef int TS_RHSFunction( PetscTS ts, PetscReal t, PetscVec x, PetscVec f, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef TS Ts = ref_TS(ts) cdef Vec Xvec = ref_Vec(x) cdef Vec Fvec = ref_Vec(f) cdef object context = Ts.get_attr('__rhsfunction__') if context is None and ctx != NULL: context = ctx assert context is not None and type(context) is tuple # sanity check (function, args, kargs) = context function(Ts, toReal(t), Xvec, Fvec, *args, **kargs) return 0 cdef int TS_RHSJacobian( PetscTS ts, PetscReal t, PetscVec x, PetscMat J, PetscMat P, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef TS Ts = ref_TS(ts) cdef Vec Xvec = ref_Vec(x) cdef Mat Jmat = ref_Mat(J) cdef Mat Pmat = ref_Mat(P) cdef object context = Ts.get_attr('__rhsjacobian__') if context is None and ctx != NULL: context = ctx assert context is not None and type(context) is tuple # sanity check (jacobian, args, kargs) = context jacobian(Ts, toReal(t), Xvec, Jmat, Pmat, *args, **kargs) return 0 # ----------------------------------------------------------------------------- cdef int TS_IFunction( PetscTS ts, PetscReal t, PetscVec x, PetscVec xdot, PetscVec f, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef TS Ts = ref_TS(ts) cdef Vec Xvec = ref_Vec(x) cdef Vec XDvec = ref_Vec(xdot) cdef Vec Fvec = ref_Vec(f) cdef object context = Ts.get_attr('__ifunction__') if context is None and ctx != NULL: context = ctx assert context is not None and type(context) is tuple # sanity check (function, args, kargs) = context function(Ts, toReal(t), Xvec, XDvec, Fvec, *args, **kargs) return 0 cdef int TS_IJacobian( PetscTS ts, PetscReal t, PetscVec x, PetscVec xdot, PetscReal a, PetscMat J, PetscMat P, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef TS Ts = ref_TS(ts) cdef Vec Xvec = ref_Vec(x) cdef Vec XDvec = ref_Vec(xdot) cdef Mat Jmat = ref_Mat(J) cdef Mat Pmat = ref_Mat(P) cdef object context = Ts.get_attr('__ijacobian__') if context is None and ctx != NULL: context = ctx assert context is not None and type(context) is tuple # sanity check (jacobian, args, kargs) = context jacobian(Ts, toReal(t), Xvec, XDvec, toReal(a), Jmat, Pmat, *args, **kargs) return 0 # ----------------------------------------------------------------------------- cdef int TS_Monitor( PetscTS ts, PetscInt step, PetscReal time, PetscVec u, void* ctx, ) except PETSC_ERR_PYTHON with gil: cdef TS Ts = ref_TS(ts) cdef Vec Vu = ref_Vec(u) cdef object monitorlist = Ts.get_attr('__monitor__') if monitorlist is None: return 0 for (monitor, args, kargs) in monitorlist: monitor(Ts, toInt(step), toReal(time), Vu, *args, **kargs) return 0 # ----------------------------------------------------------------------------- cdef int TS_PreStep( PetscTS ts, ) except PETSC_ERR_PYTHON with gil: cdef TS Ts = ref_TS(ts) (prestep, args, kargs) = Ts.get_attr('__prestep__') prestep(Ts, *args, **kargs) return 0 cdef int TS_PostStep( PetscTS ts, ) except PETSC_ERR_PYTHON with gil: cdef TS Ts = ref_TS(ts) (poststep, args, kargs) = Ts.get_attr('__poststep__') poststep(Ts, *args, **kargs) return 0 # ----------------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/Object.pyx0000644000175000001440000001730312711377604017552 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef class Object: # --- special methods --- def __cinit__(self): self.oval = NULL self.obj = &self.oval def __dealloc__(self): CHKERR( PetscDEALLOC(&self.obj[0]) ) self.obj = NULL def __richcmp__(self, other, int op): if not isinstance(self, Object): return NotImplemented if not isinstance(other, Object): return NotImplemented cdef Object s = self, o = other if op == 2: return (s.obj[0] == o.obj[0]) elif op == 3: return (s.obj[0] != o.obj[0]) else: raise TypeError("only '==' and '!='") def __nonzero__(self): return self.obj[0] != NULL def __copy__(self): cdef Object obj = type(self)() cdef PetscObject o = self.obj[0] if o != NULL: CHKERR( PetscObjectReference(o) ) obj.obj[0] = o return obj def __deepcopy__(self, dict memo not None): cdef object obj_copy = None try: obj_copy = self.copy except AttributeError: raise NotImplementedError memo # unused return obj_copy() # --- attribute management --- cdef object get_attr(self, char name[]): return PetscGetPyObj(self.obj[0], name) cdef object set_attr(self, char name[], object attr): return PetscSetPyObj(self.obj[0], name, attr) cdef object get_dict(self): return PetscGetPyDict(self.obj[0], True) # def view(self, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( PetscObjectView(self.obj[0], vwr) ) def destroy(self): CHKERR( PetscObjectDestroy(&self.obj[0]) ) return self def getType(self): cdef const_char *cval = NULL CHKERR( PetscObjectGetType(self.obj[0], &cval) ) return bytes2str(cval) # def setOptionsPrefix(self, prefix): cdef const_char *cval = NULL prefix = str2bytes(prefix, &cval) CHKERR( PetscObjectSetOptionsPrefix(self.obj[0], cval) ) def getOptionsPrefix(self): cdef const_char *cval = NULL CHKERR( PetscObjectGetOptionsPrefix(self.obj[0], &cval) ) return bytes2str(cval) def setFromOptions(self): CHKERR( PetscObjectSetFromOptions(self.obj[0]) ) # def getComm(self): cdef Comm comm = Comm() CHKERR( PetscObjectGetComm(self.obj[0], &comm.comm) ) return comm def getName(self): cdef const_char *cval = NULL CHKERR( PetscObjectGetName(self.obj[0], &cval) ) return bytes2str(cval) def setName(self, name): cdef const_char *cval = NULL name = str2bytes(name, &cval) CHKERR( PetscObjectSetName(self.obj[0], cval) ) def getClassId(self): cdef PetscClassId classid = 0 CHKERR( PetscObjectGetClassId(self.obj[0], &classid) ) return classid def getClassName(self): cdef const_char *cval = NULL CHKERR( PetscObjectGetClassName(self.obj[0], &cval) ) return bytes2str(cval) def getRefCount(self): if self.obj[0] == NULL: return 0 cdef PetscInt refcnt = 0 CHKERR( PetscObjectGetReference(self.obj[0], &refcnt) ) return toInt(refcnt) # --- general support --- def compose(self, name, Object obj): cdef const_char *cval = NULL cdef PetscObject cobj = NULL name = str2bytes(name, &cval) if obj is not None: cobj = obj.obj[0] CHKERR( PetscObjectCompose(self.obj[0], cval, cobj) ) def query(self, name): cdef const_char *cval = NULL cdef PetscObject cobj = NULL name = str2bytes(name, &cval) CHKERR( PetscObjectQuery(self.obj[0], cval, &cobj) ) if cobj == NULL: return None cdef Object obj = subtype_Object(cobj)() obj.obj[0] = cobj PetscINCREF(obj.obj) return obj def incRef(self): cdef PetscObject obj = self.obj[0] cdef PetscInt refct = 0 if obj != NULL: CHKERR( PetscObjectReference(obj) ) CHKERR( PetscObjectGetReference(obj, &refct) ) return (refct) def decRef(self): cdef PetscObject obj = self.obj[0] cdef PetscInt refct = 0 if obj != NULL: CHKERR( PetscObjectGetReference(obj, &refct) ) CHKERR( PetscObjectDereference(obj) ) if refct == 1: self.obj[0] = NULL refct -= 1 return (refct) def getAttr(self, name): cdef const_char *cval = NULL name = str2bytes(name, &cval) return self.get_attr(cval) def setAttr(self, name, attr): cdef const_char *cval = NULL name = str2bytes(name, &cval) self.set_attr(cval, attr) def getDict(self): return self.get_dict() def stateIncrease(self): PetscINCSTATE(self.obj) # --- tab level --- def incrementTabLevel(self, tab, Object parent=None): cdef PetscInt ctab = asInt(tab) cdef PetscObject cobj = NULL if parent is None else parent.obj[0] CHKERR( PetscObjectIncrementTabLevel(self.obj[0], cobj, ctab) ) def setTabLevel(self, level): cdef PetscInt clevel = asInt(level) CHKERR( PetscObjectSetTabLevel(self.obj[0], clevel) ) def getTabLevel(self): cdef PetscInt clevel = 0 CHKERR( PetscObjectGetTabLevel(self.obj[0], &clevel) ) return toInt(clevel) # --- properties --- property type: def __get__(self): return self.getType() def __set__(self, value): self.setType(value) property prefix: def __get__(self): return self.getOptionsPrefix() def __set__(self, value): self.setOptionsPrefix(value) property comm: def __get__(self): return self.getComm() property name: def __get__(self): return self.getName() def __set__(self, value): self.setName(value) property classid: def __get__(self): return self.getClassId() property klass: def __get__(self): return self.getClassName() property refcount: def __get__(self): return self.getRefCount() # --- ctypes support --- property handle: def __get__(self): cdef PetscObject obj = self.obj[0] return PyLong_FromVoidPtr(obj) # --- Fortran support --- property fortran: def __get__(self): cdef PetscObject obj = self.obj[0] return Object_toFortran(obj) # -------------------------------------------------------------------- include "cyclicgc.pxi" cdef dict type_registry = { 0 : None } __type_registry__ = type_registry cdef int PyPetscType_Register(int classid, type cls) except -1: global type_registry cdef object key = classid cdef object value = cls cdef const_char *dummy = NULL if key not in type_registry: type_registry[key] = cls reg_LogClass(str2bytes(cls.__name__, &dummy), classid) TypeEnableGC(cls) else: value = type_registry[key] if cls is not value: raise ValueError( "key: %d, cannot register: %s, " \ "already registered: %s" % (key, cls, value)) return 0 cdef type PyPetscType_Lookup(int classid): global type_registry cdef object key = classid cdef type cls = Object try: cls = type_registry[key] except KeyError: cls = Object return cls # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/DMComposite.pyx0000644000175000001440000000750012711377604020525 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef class DMComposite(DM): def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscDM newdm = NULL CHKERR( DMCompositeCreate(ccomm, &newdm) ) PetscCLEAR(self.obj); self.dm = newdm return self def addDM(self, DM dm not None, *args): """Add DM to composite""" CHKERR( DMCompositeAddDM(self.dm, dm.dm) ) cdef object item for item in args: dm = item CHKERR( DMCompositeAddDM(self.dm, dm.dm) ) def getNumber(self): """Get number of sub-DMs contained in the DMComposite""" cdef PetscInt n = 0 CHKERR( DMCompositeGetNumberDM(self.dm, &n) ) return toInt(n) getNumberDM = getNumber def getEntries(self): """Get tuple of sub-DMs contained in the DMComposite""" cdef PetscInt i, n = 0 cdef PetscDM *cdms = NULL CHKERR( DMCompositeGetNumberDM(self.dm, &n) ) cdef object tmp = oarray_p(empty_p(n), NULL, &cdms) CHKERR( DMCompositeGetEntriesArray(self.dm, cdms) ) cdef DM entry = None cdef list entries = [] for i from 0 <= i < n: entry = subtype_DM(cdms[i])() entry.dm = cdms[i] PetscINCREF(entry.obj) entries.append(entry) return tuple(entries) def scatter(self, Vec gvec not None, lvecs): """Scatter coupled global vector into split local vectors""" cdef PetscInt i, n = 0 CHKERR( DMCompositeGetNumberDM(self.dm, &n) ) cdef PetscVec *clvecs = NULL cdef object tmp = oarray_p(empty_p(n), NULL, &clvecs) for i from 0 <= i < n: clvecs[i] = (lvecs[i]).vec CHKERR( DMCompositeScatterArray(self.dm, gvec.vec, clvecs) ) def gather(self, Vec gvec not None, imode, lvecs): """Gather split local vectors into coupled global vector""" cdef PetscInsertMode cimode = insertmode(imode) cdef PetscInt i, n = 0 CHKERR( DMCompositeGetNumberDM(self.dm, &n) ) cdef PetscVec *clvecs = NULL cdef object tmp = oarray_p(empty_p(n), NULL, &clvecs) for i from 0 <= i < n: clvecs[i] = (lvecs[i]).vec CHKERR( DMCompositeGatherArray(self.dm, gvec.vec, cimode, clvecs) ) def getGlobalISs(self): cdef PetscInt i, n = 0 cdef PetscIS *cis = NULL CHKERR( DMCompositeGetNumberDM(self.dm, &n) ) CHKERR( DMCompositeGetGlobalISs(self.dm, &cis) ) cdef object isets = [ref_IS(cis[i]) for i from 0 <= i < n] for i from 0 <= i < n: CHKERR( ISDestroy(&cis[i]) ) CHKERR( PetscFree(cis) ) return isets def getLocalISs(self): cdef PetscInt i, n = 0 cdef PetscIS *cis = NULL CHKERR( DMCompositeGetNumberDM(self.dm, &n) ) CHKERR( DMCompositeGetLocalISs(self.dm, &cis) ) cdef object isets = [ref_IS(cis[i]) for i from 0 <= i < n] for i from 0 <= i < n: CHKERR( ISDestroy(&cis[i]) ) CHKERR( PetscFree(cis) ) return isets def getLGMaps(self): cdef PetscInt i, n = 0 cdef PetscLGMap *clgm = NULL CHKERR( DMCompositeGetNumberDM(self.dm, &n) ) CHKERR( DMCompositeGetISLocalToGlobalMappings(self.dm, &clgm) ) cdef object lgms = [ref_LGMap(clgm[i]) for i from 0 <= i < n] for i from 0 <= i < n: CHKERR( ISLocalToGlobalMappingDestroy(&clgm[i]) ) CHKERR( PetscFree(clgm) ) return lgms def getAccess(self, Vec gvec not None, locs=None): """Get access to specified parts of global vector. Use via 'with' context manager (PEP 343). """ return _DMComposite_access(self, gvec, locs) petsc4py-3.7.0/src/PETSc/petscdmda.pxi0000644000175000001440000002761412711377604020276 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from * nogil: ctypedef enum PetscDMDAStencilType"DMDAStencilType": DMDA_STENCIL_STAR DMDA_STENCIL_BOX ctypedef enum PetscDMDAInterpolationType"DMDAInterpolationType": DMDA_INTERPOLATION_Q0 "DMDA_Q0" DMDA_INTERPOLATION_Q1 "DMDA_Q1" ctypedef enum PetscDMDAElementType"DMDAElementType": DMDA_ELEMENT_P1 DMDA_ELEMENT_Q1 int DMDACreateND(MPI_Comm, PetscInt,PetscInt, # dim, dof PetscInt,PetscInt,PetscInt, # M, N, P PetscInt,PetscInt,PetscInt, # m, n, p PetscInt[],PetscInt[],PetscInt[], # lx, ly, lz PetscDMBoundaryType, # bx PetscDMBoundaryType, # by PetscDMBoundaryType, # bz PetscDMDAStencilType, # stencil type PetscInt, # stencil width PetscDM*) int DMDASetDof(PetscDM,PetscInt) int DMDASetSizes(PetscDM,PetscInt,PetscInt,PetscInt) int DMDASetNumProcs(PetscDM,PetscInt,PetscInt,PetscInt) int DMDASetBoundaryType(PetscDM,PetscDMBoundaryType,PetscDMBoundaryType,PetscDMBoundaryType) int DMDASetStencilType(PetscDM,PetscDMDAStencilType) int DMDASetStencilWidth(PetscDM,PetscInt) int DMDAGetInfo(PetscDM, PetscInt*, PetscInt*,PetscInt*,PetscInt*, PetscInt*,PetscInt*,PetscInt*, PetscInt*,PetscInt*, PetscDMBoundaryType*, PetscDMBoundaryType*, PetscDMBoundaryType*, PetscDMDAStencilType*) int DMDAGetCorners(PetscDM, PetscInt*,PetscInt*,PetscInt*, PetscInt*,PetscInt*,PetscInt*) int DMDAGetGhostCorners(PetscDM, PetscInt*,PetscInt*,PetscInt*, PetscInt*,PetscInt*,PetscInt*) int DMDAGetOwnershipRanges(PetscDM, const_PetscInt*[], const_PetscInt*[], const_PetscInt*[]) int DMDASetUniformCoordinates(PetscDM, PetscReal,PetscReal, PetscReal,PetscReal, PetscReal,PetscReal) int DMDAGetBoundingBox(PetscDM,PetscReal[],PetscReal[]) int DMDAGetLocalBoundingBox(PetscDM,PetscReal[],PetscReal[]) int DMDACreateNaturalVector(PetscDM,PetscVec*) int DMDAGlobalToNaturalBegin(PetscDM,PetscVec,PetscInsertMode,PetscVec) int DMDAGlobalToNaturalEnd(PetscDM,PetscVec,PetscInsertMode,PetscVec) int DMDANaturalToGlobalBegin(PetscDM,PetscVec,PetscInsertMode,PetscVec) int DMDANaturalToGlobalEnd(PetscDM,PetscVec,PetscInsertMode,PetscVec) int DMDAGetAO(PetscDM,PetscAO*) int DMDAGetScatter(PetscDM,PetscScatter*,PetscScatter*) int DMDASetRefinementFactor(PetscDM,PetscInt,PetscInt,PetscInt) int DMDAGetRefinementFactor(PetscDM,PetscInt*,PetscInt*,PetscInt*) int DMDASetInterpolationType(PetscDM,PetscDMDAInterpolationType) int DMDAGetInterpolationType(PetscDM,PetscDMDAInterpolationType*) int DMDASetElementType(PetscDM,PetscDMDAElementType) int DMDAGetElementType(PetscDM,PetscDMDAElementType*) int DMDAGetElements(PetscDM,PetscInt*,PetscInt*,const_PetscInt**) int DMDARestoreElements(PetscDM,PetscInt*,PetscInt*,const_PetscInt**) int DMDASetFieldName(PetscDM,PetscInt,const_char[]) int DMDAGetFieldName(PetscDM,PetscInt,const_char*[]) int DMDASetCoordinateName(PetscDM,PetscInt,const_char[]) int DMDAGetCoordinateName(PetscDM,PetscInt,const_char*[]) # -------------------------------------------------------------------- cdef inline PetscDMDAStencilType asStencil(object stencil) \ except (-1): if isinstance(stencil, str): if stencil == "star": return DMDA_STENCIL_STAR elif stencil == "box": return DMDA_STENCIL_BOX else: raise ValueError("unknown stencil type: %s" % stencil) return stencil cdef inline object toStencil(PetscDMDAStencilType stype): if stype == DMDA_STENCIL_STAR: return "star" elif stype == DMDA_STENCIL_BOX: return "box" cdef inline PetscDMDAInterpolationType dainterpolationtype(object itype) \ except (-1): if (isinstance(itype, str)): if itype in ("q0", "Q0"): return DMDA_INTERPOLATION_Q0 if itype in ("q1", "Q1"): return DMDA_INTERPOLATION_Q1 else: raise ValueError("unknown interpolation type: %s" % itype) return itype cdef inline PetscDMDAElementType daelementtype(object etype) \ except (-1): if (isinstance(etype, str)): if etype in ("p1", "P1"): return DMDA_ELEMENT_P1 if etype in ("q1", "Q1"): return DMDA_ELEMENT_Q1 else: raise ValueError("unknown element type: %s" % etype) return etype cdef inline int DMDAGetDim(PetscDM da, PetscInt *dim) nogil: return DMDAGetInfo(da, dim, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL) cdef inline PetscInt asDims(dims, PetscInt *_M, PetscInt *_N, PetscInt *_P) except? -1: cdef PetscInt dim = PETSC_DECIDE cdef object M=None, N=None, P=None dims = tuple(dims) dim = len(dims) if dim == 0: pass elif dim == 1: M, = dims elif dim == 2: M, N = dims elif dim == 3: M, N, P = dims if dim >= 1: _M[0] = asInt(M) if dim >= 2: _N[0] = asInt(N) if dim >= 3: _P[0] = asInt(P) return dim cdef inline tuple toDims(PetscInt dim, PetscInt M, PetscInt N, PetscInt P): if dim == 0: return () elif dim == 1: return (toInt(M),) elif dim == 2: return (toInt(M), toInt(N)) elif dim == 3: return (toInt(M), toInt(N), toInt(P)) cdef inline tuple asOwnershipRanges(object ownership_ranges, PetscInt dim, PetscInt *m, PetscInt *n, PetscInt *p, PetscInt **_x, PetscInt **_y, PetscInt **_z): cdef object ranges = list(ownership_ranges) cdef PetscInt rdim = len(ranges) cdef PetscInt nlx=0, nly=0, nlz=0 if dim == PETSC_DECIDE: dim = rdim elif dim != rdim: raise ValueError( "number of dimensions %d and number ownership ranges %d" % (toInt(dim), toInt(rdim))) if dim >= 1: ranges[0] = iarray_i(ranges[0], &nlx, _x) if m[0] == PETSC_DECIDE: m[0] = nlx elif m[0] != nlx: raise ValueError( "ownership range size %d and number or processors %d" % (toInt(nlx), toInt(m[0]))) if dim >= 2: ranges[1] = iarray_i(ranges[1], &nly, _y) if n[0] == PETSC_DECIDE: n[0] = nly elif n[0] != nly: raise ValueError( "ownership range size %d and number or processors %d" % (toInt(nly), toInt(n[0]))) if dim >= 3: ranges[2] = iarray_i(ranges[2], &nlz, _z) if p[0] == PETSC_DECIDE: p[0] = nlz elif p[0] != nlz: raise ValueError( "ownership range size %d and number or processors %d" % (toInt(nlz), toInt(p[0]))) return ranges cdef inline tuple toOwnershipRanges(PetscInt dim, PetscInt m, PetscInt n, PetscInt p, const_PetscInt *lx, const_PetscInt *ly, const_PetscInt *lz): # Returns tuple of arrays containing ownership ranges as Python arrays ranges = [array_i(m, lx)] if dim > 1: ranges.append(array_i(n, ly)) if dim > 2: ranges.append(array_i(p, lz)) return tuple(ranges) # -------------------------------------------------------------------- cdef class _DMDA_Vec_array(object): cdef _Vec_buffer vecbuf cdef readonly tuple starts, sizes cdef readonly tuple shape, strides cdef readonly ndarray array def __cinit__(self, DMDA da not None, Vec vec not None, bint DOF=False): # cdef PetscInt dim=0, dof=0 CHKERR( DMDAGetInfo(da.dm, &dim, NULL, NULL, NULL, NULL, NULL, NULL, &dof, NULL, NULL, NULL, NULL, NULL) ) cdef PetscInt lxs=0, lys=0, lzs=0 cdef PetscInt lxm=0, lym=0, lzm=0 CHKERR( DMDAGetCorners(da.dm, &lxs, &lys, &lzs, &lxm, &lym, &lzm) ) cdef PetscInt gxs=0, gys=0, gzs=0 cdef PetscInt gxm=0, gym=0, gzm=0 CHKERR( DMDAGetGhostCorners(da.dm, &gxs, &gys, &gzs, &gxm, &gym, &gzm) ) # cdef PetscInt n=0 CHKERR( VecGetLocalSize(vec.vec, &n) ) cdef PetscInt xs, ys, zs, xm, ym, zm if (n == lxm*lym*lzm*dof): xs, ys, zs = lxs, lys, lzs xm, ym, zm = lxm, lym, lzm elif (n == gxm*gym*gzm*dof): xs, ys, zs = gxs, gys, gzs xm, ym, zm = gxm, gym, gzm else: raise ValueError( "Vector local size %d is not compatible " "with DMDA local sizes %s" % (n, toDims(dim, lxm, lym, lzm))) # cdef tuple starts = toDims(dim, xs, ys, zs) cdef tuple sizes = toDims(dim, xm, ym, zm) cdef Py_ssize_t k = sizeof(PetscScalar) cdef Py_ssize_t f = dof cdef Py_ssize_t d = dim cdef tuple shape = toDims(dim, xm, ym, zm) cdef tuple strides = (k*f, k*f*xm, k*f*xm*ym)[:d] if DOF or f > 1: shape += (f,) if DOF or f > 1: strides += (k,) # self.vecbuf = _Vec_buffer(vec) self.starts = starts self.sizes = sizes self.shape = shape self.strides = strides cdef int acquire(self) except -1: self.vecbuf.acquire() if self.array is None: self.array = asarray(self.vecbuf) self.array.shape = self.shape self.array.strides = self.strides return 0 cdef int release(self) except -1: self.vecbuf.release() self.array = None return 0 # def __getitem__(self, index): self.acquire() index = adjust_index_exp(self.starts, index) return self.array[index] def __setitem__(self, index, value): self.acquire() index = adjust_index_exp(self.starts, index) self.array[index] = value # 'with' statement (PEP 343) def __enter__(self): self.acquire() return self def __exit__(self, *exc): self.release() return None cdef object adjust_index_exp(object starts, object index): if not isinstance(index, tuple): return adjust_index(starts[0], index) index = list(index) for i, start in enumerate(starts): index[i] = adjust_index(start, index[i]) index = tuple(index) return index cdef object adjust_index(object lbound, object index): if index is None: return index if index is Ellipsis: return index if isinstance(index, slice): start = index.start stop = index.stop step = index.step if start is not None: start -= lbound if stop is not None: stop -= lbound return slice(start, stop, step) try: return index - lbound except TypeError: return index # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/Partitioner.pyx0000644000175000001440000000443112711377604020642 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class PartitionerType(object): CHACO = S_(PETSCPARTITIONERCHACO) PARMETIS = S_(PETSCPARTITIONERPARMETIS) SHELL = S_(PETSCPARTITIONERSHELL) # -------------------------------------------------------------------- cdef class Partitioner(Object): Type = PartitionerType def __cinit__(self): self.obj = &self.part self.part = NULL def view(self, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( PetscPartitionerView(self.part, vwr) ) def destroy(self): CHKERR( PetscPartitionerDestroy(&self.part) ) return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscPartitioner newpart = NULL CHKERR( PetscPartitionerCreate(ccomm, &newpart) ) PetscCLEAR(self.obj); self.part = newpart return self def setType(self, part_type): cdef const_char *cval = NULL part_type = str2bytes(part_type, &cval) CHKERR( PetscPartitionerSetType(self.part, cval) ) def getType(self): cdef PetscPartitionerType cval = NULL CHKERR( PetscPartitionerGetType(self.part, &cval) ) return bytes2str(cval) def setFromOptions(self): CHKERR( PetscPartitionerSetFromOptions(self.part) ) def setUp(self): CHKERR( PetscPartitionerSetUp(self.part) ) def setShellPartition(self, numProcs, sizes=None, points=None): cdef PetscInt cnumProcs = asInt(numProcs) cdef PetscInt *csizes = NULL cdef PetscInt *cpoints = NULL cdef PetscInt nsize = 0 if sizes is not None: sizes = iarray_i(sizes, &nsize, &csizes) if nsize != cnumProcs: raise ValueError("sizes array should have %d entries (has %d)" % numProcs, toInt(nsize)) if points is None: raise ValueError("Must provide both sizes and points arrays") if points is not None: points = iarray_i(points, NULL, &cpoints) CHKERR( PetscPartitionerShellSetPartition(self.part, cnumProcs, csizes, cpoints) ) petsc4py-3.7.0/src/PETSc/Options.pyx0000644000175000001440000000771712711377604020007 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef class Options: cdef PetscOptions opt cdef object _prefix def __init__(self, prefix=None): self.opt = NULL self.prefix = prefix def __dealloc__(self): if self.opt == NULL: return CHKERR( PetscOptionsDestroy(&self.opt) ) def __contains__(self, item): return self.hasName(item) def __getitem__(self, item): return self.getString(item) def __setitem__(self, item, value): self.setValue(item, value) def __delitem__(self, item): self.delValue(item) property prefix: def __get__(self): return self._prefix def __set__(self, prefix): self._prefix = getprefix(prefix) def __del__(self): self._prefix = None # def create(self): if self.opt != NULL: return CHKERR( PetscOptionsCreate(&self.opt) ) return self def destroy(self): if self.opt == NULL: return CHKERR( PetscOptionsDestroy(&self.opt) ) return self def clear(self): if self.opt == NULL: return CHKERR( PetscOptionsClear(self.opt) ) return self def view(self, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( PetscOptionsView(self.opt, vwr) ) def setFromOptions(self): CHKERR( PetscOptionsSetFromOptions(self.opt) ) # def prefixPush(self, prefix): prefix = getprefix(prefix) cdef const_char *cprefix = NULL prefix = str2bytes(prefix, &cprefix) CHKERR( PetscOptionsPrefixPush(self.opt, cprefix) ) def prefixPop(self): CHKERR( PetscOptionsPrefixPop(self.opt) ) # def hasName(self, name): cdef const_char *pr = NULL cdef const_char *nm = NULL tmp = getpair(self.prefix, name, &pr, &nm) cdef PetscBool flag = PETSC_FALSE CHKERR( PetscOptionsHasName(self.opt, pr, nm, &flag) ) return flag def setValue(self, name, value): cdef const_char *pr = NULL cdef const_char *nm = NULL tmp = getpair(self.prefix, name, &pr, &nm) if pr == NULL: option = bytes2str(nm) else: option = '-%s%s' % (bytes2str(pr), bytes2str(&nm[1])) if type(value) is bool: value = str(value).lower() elif value is not None : value = str(value) cdef const_char *key = NULL cdef const_char *val = NULL option = str2bytes(option, &key) value = str2bytes(value, &val) CHKERR( PetscOptionsSetValue(self.opt, key, val) ) def delValue(self, name): cdef const_char *pr = NULL cdef const_char *nm = NULL tmp = getpair(self.prefix, name, &pr, &nm) if pr == NULL: option = bytes2str(nm) else: option = '-%s%s' % (bytes2str(pr), bytes2str(&nm[1])) cdef const_char *key = NULL option = str2bytes(option, &key) CHKERR( PetscOptionsClearValue(self.opt, key) ) # def getBool(self, name, default=None): return getopt(self.opt, OPT_BOOL, self.prefix, name, default) def getInt(self, name, default=None): return getopt(self.opt, OPT_INT, self.prefix, name, default) def getReal(self, name, default=None): return getopt(self.opt, OPT_REAL, self.prefix, name, default) def getScalar(self, name, default=None): return getopt(self.opt, OPT_SCALAR, self.prefix, name, default) def getString(self, name, default=None): return getopt(self.opt, OPT_STRING, self.prefix, name, default) def getAll(self): cdef char *allopts = NULL CHKERR( PetscOptionsGetAll(self.opt, &allopts) ) options = bytes2str(allopts) CHKERR( PetscFree(allopts) ) return parseopt(options, self.prefix) # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscmat.pxi0000644000175000001440000012044412711377604020145 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef char* PetscMatType "const char*" PetscMatType MATSAME PetscMatType MATMAIJ PetscMatType MATSEQMAIJ PetscMatType MATMPIMAIJ PetscMatType MATIS PetscMatType MATAIJ PetscMatType MATSEQAIJ PetscMatType MATMPIAIJ PetscMatType MATAIJCRL PetscMatType MATSEQAIJCRL PetscMatType MATMPIAIJCRL PetscMatType MATAIJCUSP PetscMatType MATSEQAIJCUSP PetscMatType MATMPIAIJCUSP PetscMatType MATAIJCUSPARSE PetscMatType MATSEQAIJCUSPARSE PetscMatType MATMPIAIJCUSPARSE PetscMatType MATAIJVIENNACL PetscMatType MATSEQAIJVIENNACL PetscMatType MATMPIAIJVIENNACL PetscMatType MATAIJPERM PetscMatType MATSEQAIJPERM PetscMatType MATMPIAIJPERM PetscMatType MATSHELL PetscMatType MATDENSE PetscMatType MATSEQDENSE PetscMatType MATMPIDENSE PetscMatType MATELEMENTAL PetscMatType MATBAIJ PetscMatType MATSEQBAIJ PetscMatType MATMPIBAIJ PetscMatType MATMPIADJ PetscMatType MATSBAIJ PetscMatType MATSEQSBAIJ PetscMatType MATMPISBAIJ PetscMatType MATBSTRM PetscMatType MATSEQBSTRM PetscMatType MATMPIBSTRM PetscMatType MATSBSTRM PetscMatType MATSEQSBSTRM PetscMatType MATMPISBSTRM PetscMatType MATDAAD PetscMatType MATMFFD PetscMatType MATNORMAL PetscMatType MATNORMALHERMITIAN PetscMatType MATLRC PetscMatType MATSCATTER PetscMatType MATBLOCKMAT PetscMatType MATCOMPOSITE PetscMatType MATFFT PetscMatType MATFFTW PetscMatType MATSEQCUFFT PetscMatType MATTRANSPOSEMAT PetscMatType MATSCHURCOMPLEMENT #PetscMatType MATPYTHON PetscMatType MATHYPRESTRUCT PetscMatType MATHYPRESSTRUCT PetscMatType MATSUBMATRIX PetscMatType MATLOCALREF PetscMatType MATNEST PetscMatType MATPREALLOCATOR ctypedef char* PetscMatOrderingType "const char*" PetscMatOrderingType MATORDERINGNATURAL PetscMatOrderingType MATORDERINGND PetscMatOrderingType MATORDERING1WD PetscMatOrderingType MATORDERINGRCM PetscMatOrderingType MATORDERINGQMD PetscMatOrderingType MATORDERINGROWLENGTH PetscMatOrderingType MATORDERINGWBM PetscMatOrderingType MATORDERINGSPECTRAL PetscMatOrderingType MATORDERINGAMD ctypedef enum PetscMatReuse "MatReuse": MAT_INITIAL_MATRIX MAT_REUSE_MATRIX MAT_IGNORE_MATRIX ctypedef enum PetscMatDuplicateOption "MatDuplicateOption": MAT_DO_NOT_COPY_VALUES MAT_COPY_VALUES MAT_SHARE_NONZERO_PATTERN ctypedef enum PetscMatSORType "MatSORType": SOR_FORWARD_SWEEP SOR_BACKWARD_SWEEP SOR_SYMMETRIC_SWEEP SOR_LOCAL_FORWARD_SWEEP SOR_LOCAL_BACKWARD_SWEEP SOR_LOCAL_SYMMETRIC_SWEEP SOR_ZERO_INITIAL_GUESS SOR_EISENSTAT SOR_APPLY_UPPER SOR_APPLY_LOWER ctypedef enum PetscMatAssemblyType "MatAssemblyType": MAT_FLUSH_ASSEMBLY MAT_FINAL_ASSEMBLY ctypedef enum PetscMatInfoType "MatInfoType": MAT_LOCAL MAT_GLOBAL_MAX MAT_GLOBAL_SUM ctypedef enum PetscMatStructure "MatStructure": MAT_SAME_NONZERO_PATTERN "SAME_NONZERO_PATTERN" MAT_DIFFERENT_NONZERO_PATTERN "DIFFERENT_NONZERO_PATTERN" MAT_SUBSET_NONZERO_PATTERN "SUBSET_NONZERO_PATTERN" ctypedef enum PetscMatReuse "MatReuse": MAT_INITIAL_MATRIX MAT_REUSE_MATRIX ctypedef enum PetscMatOption "MatOption": MAT_UNUSED_NONZERO_LOCATION_ERR MAT_ROW_ORIENTED MAT_SYMMETRIC MAT_STRUCTURALLY_SYMMETRIC MAT_NEW_DIAGONALS MAT_IGNORE_OFF_PROC_ENTRIES MAT_USE_HASH_TABLE MAT_KEEP_NONZERO_PATTERN MAT_IGNORE_ZERO_ENTRIES MAT_USE_INODES MAT_HERMITIAN MAT_SYMMETRY_ETERNAL MAT_NEW_NONZERO_LOCATION_ERR MAT_IGNORE_LOWER_TRIANGULAR MAT_ERROR_LOWER_TRIANGULAR MAT_GETROW_UPPERTRIANGULAR MAT_SPD MAT_NO_OFF_PROC_ZERO_ROWS MAT_NO_OFF_PROC_ENTRIES MAT_NEW_NONZERO_LOCATIONS MAT_NEW_NONZERO_ALLOCATION_ERR MAT_SUBSET_OFF_PROC_ENTRIES int MatView(PetscMat,PetscViewer) int MatDestroy(PetscMat*) int MatCreate(MPI_Comm,PetscMat*) int MatCreateIS(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,PetscLGMap,PetscMat*) int MatISGetLocalMat(PetscMat,PetscMat*) int MatCreateScatter(MPI_Comm,PetscScatter,PetscMat*) int MatScatterSetVecScatter(PetscMat,PetscScatter) int MatScatterGetVecScatter(PetscMat,PetscScatter*) int MatCreateNormal(PetscMat,PetscMat*) int MatCreateTranspose(PetscMat,PetscMat*) int MatCreateLRC(PetscMat,PetscMat,PetscMat,PetscMat*) int MatCreateSubMatrix(PetscMat,PetscIS,PetscIS,PetscMat*) int MatCreateRedundantMatrix(PetscMat,PetscInt,MPI_Comm,PetscMatReuse,PetscMat*) int MatCreateNest(MPI_Comm,PetscInt,PetscIS[],PetscInt,PetscIS[],PetscMat[],PetscMat*) int MatCreateShell(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,void*,PetscMat*) int MatCreateSeqAIJWithArrays(MPI_Comm,PetscInt,PetscInt,PetscInt[],PetscInt[],PetscScalar[],PetscMat*) int MatCreateMPIAIJWithArrays(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt[],PetscInt[],PetscScalar[],PetscMat*) int MatCreateMPIAIJWithSplitArrays(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,PetscInt[],PetscInt[],PetscScalar[],PetscInt[],PetscInt[],PetscScalar[],PetscMat*) int MatSetSizes(PetscMat,PetscInt,PetscInt,PetscInt,PetscInt) int MatSetBlockSize(PetscMat,PetscInt) int MatSetBlockSizes(PetscMat,PetscInt,PetscInt) int MatSetType(PetscMat,PetscMatType) int MatSetOption(PetscMat,PetscMatOption,PetscBool) enum: MAT_SKIP_ALLOCATION int MatSeqAIJSetPreallocation (PetscMat,PetscInt,PetscInt[]) int MatMPIAIJSetPreallocation (PetscMat,PetscInt,PetscInt[],PetscInt,PetscInt[]) int MatSeqBAIJSetPreallocation (PetscMat,PetscInt,PetscInt,PetscInt[]) int MatMPIBAIJSetPreallocation (PetscMat,PetscInt,PetscInt,PetscInt[],PetscInt,PetscInt[]) int MatSeqSBAIJSetPreallocation(PetscMat,PetscInt,PetscInt,PetscInt[]) int MatMPISBAIJSetPreallocation(PetscMat,PetscInt,PetscInt,PetscInt[],PetscInt,PetscInt[]) int MatSeqAIJSetPreallocationCSR (PetscMat, PetscInt[],PetscInt[],PetscScalar[]) int MatMPIAIJSetPreallocationCSR (PetscMat, PetscInt[],PetscInt[],PetscScalar[]) int MatSeqBAIJSetPreallocationCSR (PetscMat,PetscInt,PetscInt[],PetscInt[],PetscScalar[]) int MatMPIBAIJSetPreallocationCSR (PetscMat,PetscInt,PetscInt[],PetscInt[],PetscScalar[]) int MatSeqSBAIJSetPreallocationCSR(PetscMat,PetscInt,PetscInt[],PetscInt[],PetscScalar[]) int MatMPISBAIJSetPreallocationCSR(PetscMat,PetscInt,PetscInt[],PetscInt[],PetscScalar[]) int MatSeqDenseSetPreallocation(PetscMat,PetscScalar[]) int MatMPIDenseSetPreallocation(PetscMat,PetscScalar[]) int MatSetOptionsPrefix(PetscMat,char[]) int MatGetOptionsPrefix(PetscMat,char*[]) int MatSetFromOptions(PetscMat) int MatSetUp(PetscMat) int MatGetType(PetscMat,PetscMatType*) int MatGetSize(PetscMat,PetscInt*,PetscInt*) int MatGetLocalSize(PetscMat,PetscInt*,PetscInt*) int MatGetBlockSize(PetscMat,PetscInt*) int MatGetBlockSizes(PetscMat,PetscInt*,PetscInt*) int MatGetOwnershipRange(PetscMat,PetscInt*,PetscInt*) int MatGetOwnershipRanges(PetscMat,const_PetscInt*[]) int MatGetOwnershipRangeColumn(PetscMat,PetscInt*,PetscInt*) int MatGetOwnershipRangesColumn(PetscMat,const_PetscInt*[]) int MatGetOwnershipIS(PetscMat,PetscIS*,PetscIS*) int MatEqual(PetscMat,PetscMat,PetscBool*) int MatLoad(PetscMat,PetscViewer) int MatDuplicate(PetscMat,PetscMatDuplicateOption,PetscMat*) int MatCopy(PetscMat,PetscMat,PetscMatStructure) int MatTranspose(PetscMat,PetscMatReuse,PetscMat*) int MatConvert(PetscMat,PetscMatType,PetscMatReuse,PetscMat*) int MatIsSymmetric(PetscMat,PetscReal,PetscBool*) int MatIsStructurallySymmetric(PetscMat,PetscBool*) int MatIsHermitian(PetscMat,PetscReal,PetscBool*) int MatIsSymmetricKnown(PetscMat,PetscBool*,PetscBool*) int MatIsHermitianKnown(PetscMat,PetscBool*,PetscBool*) int MatIsTranspose(PetscMat A,PetscMat B,PetscReal tol,PetscBool *flg) int MatCreateVecs(PetscMat,PetscVec*,PetscVec*) int MatSetValue(PetscMat,PetscInt,PetscInt,PetscScalar,PetscInsertMode) int MatSetValues(PetscMat,PetscInt,PetscInt[],PetscInt,PetscInt[],PetscScalar[],PetscInsertMode) int MatSetValuesBlocked(PetscMat,PetscInt,PetscInt[],PetscInt,PetscInt[],PetscScalar[],PetscInsertMode) int MatSetLocalToGlobalMapping(PetscMat,PetscLGMap,PetscLGMap) int MatSetValueLocal(PetscMat,PetscInt,PetscInt,PetscScalar,PetscInsertMode) int MatSetValuesLocal(PetscMat,PetscInt,PetscInt[],PetscInt,PetscInt[],PetscScalar[],PetscInsertMode) int MatSetValuesBlockedLocal(PetscMat,PetscInt,PetscInt[],PetscInt,PetscInt[],PetscScalar[],PetscInsertMode) int MatSetStencil(PetscMat,PetscInt,PetscInt[],PetscInt[],PetscInt) ctypedef struct PetscMatStencil "MatStencil": PetscInt k,j,i,c int MatSetValuesStencil(PetscMat,PetscInt,PetscMatStencil[],PetscInt,PetscMatStencil[],PetscScalar[],PetscInsertMode) int MatSetValuesBlockedStencil(PetscMat,PetscInt,PetscMatStencil[],PetscInt,PetscMatStencil[],PetscScalar[],PetscInsertMode) int MatGetValues(PetscMat,PetscInt,PetscInt[],PetscInt,PetscInt[],PetscScalar[]) int MatGetRow(PetscMat,PetscInt,PetscInt*,const_PetscInt*[],const_PetscScalar*[]) int MatRestoreRow(PetscMat,PetscInt,PetscInt*,const_PetscInt*[],const_PetscScalar*[]) int MatGetRowIJ(PetscMat,PetscInt,PetscBool,PetscBool,PetscInt*,const_PetscInt*[],const_PetscInt*[],PetscBool*) int MatRestoreRowIJ(PetscMat,PetscInt,PetscBool,PetscBool,PetscInt*,const_PetscInt*[],const_PetscInt*[],PetscBool*) int MatGetColumnIJ(PetscMat,PetscInt,PetscBool,PetscBool,PetscInt*,const_PetscInt*[],const_PetscInt*[],PetscBool*) int MatRestoreColumnIJ(PetscMat,PetscInt,PetscBool,PetscBool,PetscInt*,const_PetscInt*[],const_PetscInt*[],PetscBool*) int MatZeroEntries(PetscMat) int MatStoreValues(PetscMat) int MatRetrieveValues(PetscMat) int MatAssemblyBegin(PetscMat,PetscMatAssemblyType) int MatAssemblyEnd(PetscMat,PetscMatAssemblyType) int MatAssembled(PetscMat,PetscBool*) int MatDiagonalSet(PetscMat,PetscVec,PetscInsertMode) int MatDiagonalScale(PetscMat, PetscVec OPTIONAL, PetscVec OPTIONAL) int MatScale(PetscMat,PetscScalar) int MatShift(PetscMat,PetscScalar) int MatChop(PetscMat,PetscReal) int MatAXPY(PetscMat,PetscScalar,PetscMat,PetscMatStructure) int MatAYPX(PetscMat,PetscScalar,PetscMat,PetscMatStructure) int MatMatMult(PetscMat,PetscMat,PetscMatReuse,PetscReal,PetscMat*) int MatMatTransposeMult(PetscMat,PetscMat,PetscMatReuse,PetscReal,PetscMat*) int MatTransposeMatMult(PetscMat,PetscMat,PetscMatReuse,PetscReal,PetscMat*) int MatMatMultSymbolic(PetscMat,PetscMat,PetscReal,PetscMat*) int MatMatMultNumeric(PetscMat,PetscMat,PetscMat) int MatInterpolate(PetscMat,PetscVec,PetscVec) int MatInterpolateAdd(PetscMat,PetscVec,PetscVec,PetscVec) int MatRestrict(PetscMat,PetscVec,PetscVec) int MatPermute(PetscMat,PetscIS,PetscIS,PetscMat*) int MatPermuteSparsify(PetscMat,PetscInt,PetscReal,PetscReal,PetscIS,PetscIS,PetscMat*) int MatMerge(MPI_Comm,PetscMat,PetscInt,PetscMatReuse,PetscMat*) int MatGetSubMatrix(PetscMat,PetscIS,PetscIS,PetscMatReuse,PetscMat*) int MatGetSubMatrices(PetscMat,PetscInt,PetscIS[],PetscIS[],PetscMatReuse,PetscMat*[]) int MatIncreaseOverlap(PetscMat,PetscInt,PetscIS[],PetscInt) int MatGetDiagonalBlock(PetscMat,PetscMat*) int MatGetLocalSubMatrix(PetscMat,PetscIS,PetscIS,PetscMat*) int MatRestoreLocalSubMatrix(PetscMat,PetscIS,PetscIS,PetscMat*) int MatDestroyMatrices(PetscInt,PetscMat*[]) int MatConjugate(PetscMat) int MatRealPart(PetscMat) int MatImaginaryPart(PetscMat) int MatZeroRows(PetscMat,PetscInt,PetscInt[],PetscScalar,PetscVec,PetscVec) int MatZeroRowsLocal(PetscMat,PetscInt,PetscInt[],PetscScalar,PetscVec,PetscVec) int MatZeroRowsIS(PetscMat,PetscIS,PetscScalar,PetscVec,PetscVec) int MatZeroRowsLocalIS(PetscMat,PetscIS,PetscScalar,PetscVec,PetscVec) int MatZeroRowsColumns(PetscMat,PetscInt,PetscInt[],PetscScalar,PetscVec,PetscVec) int MatZeroRowsColumnsIS(PetscMat,PetscIS,PetscScalar,PetscVec,PetscVec) int MatGetDiagonal(PetscMat,PetscVec) int MatGetRowSum(PetscMat,PetscVec) int MatInvertBlockDiagonal(PetscMat,const_PetscScalar**) int MatGetRowMax(PetscMat,PetscVec,PetscInt[]) int MatGetRowMaxAbs(PetscMat,PetscVec,PetscInt[]) int MatGetColumnVector(PetscMat,PetscVec,PetscInt) int MatNorm(PetscMat,PetscNormType,PetscReal*) int MatMult(PetscMat,PetscVec,PetscVec) int MatMultAdd(PetscMat,PetscVec,PetscVec,PetscVec) int MatMultTranspose(PetscMat,PetscVec,PetscVec) int MatMultTransposeAdd(PetscMat,PetscVec,PetscVec,PetscVec) int MatMultHermitian"MatMultHermitianTranspose"(PetscMat,PetscVec,PetscVec) int MatMultHermitianAdd"MatMultHermitianTransposeAdd"(PetscMat,PetscVec,PetscVec,PetscVec) int MatMultConstrained(PetscMat,PetscVec,PetscVec) int MatMultTransposeConstrained(PetscMat,PetscVec,PetscVec) int MatSOR(PetscMat,PetscVec,PetscReal,PetscMatSORType,PetscReal,PetscInt,PetscInt,PetscVec) int MatGetOrdering(PetscMat,PetscMatOrderingType,PetscIS*,PetscIS*) int MatReorderForNonzeroDiagonal(PetscMat,PetscReal,PetscIS,PetscIS) ctypedef char* PetscMatSolverPackage "const char*" ctypedef enum PetscMatFactorShiftType "MatFactorShiftType": MAT_SHIFT_NONE MAT_SHIFT_NONZERO MAT_SHIFT_POSITIVE_DEFINITE MAT_SHIFT_INBLOCKS ctypedef struct PetscMatFactorInfo "MatFactorInfo": PetscReal fill PetscReal levels, diagonal_fill PetscReal usedt, dt, dtcol, dtcount PetscReal zeropivot, pivotinblocks PetscReal shifttype, shiftamount ctypedef struct PetscMatInfo "MatInfo": PetscLogDouble block_size PetscLogDouble nz_allocated, nz_used, nz_unneeded PetscLogDouble memory PetscLogDouble assemblies PetscLogDouble mallocs PetscLogDouble fill_ratio_given, fill_ratio_needed PetscLogDouble factor_mallocs int MatGetInfo(PetscMat,PetscMatInfoType,PetscMatInfo*) int MatFactorInfoInitialize(PetscMatFactorInfo*) int MatCholeskyFactor(PetscMat,PetscIS,PetscMatFactorInfo*) int MatCholeskyFactorSymbolic(PetscMat,PetscIS,PetscMatFactorInfo*,PetscMat*) int MatCholeskyFactorNumeric(PetscMat,PetscMatFactorInfo*,PetscMat*) int MatLUFactor(PetscMat,PetscIS,PetscIS,PetscMatFactorInfo*) int MatILUFactor(PetscMat,PetscIS,PetscIS,PetscMatFactorInfo*) int MatICCFactor(PetscMat,PetscIS,PetscMatFactorInfo*) int MatLUFactorSymbolic(PetscMat,PetscIS,PetscIS,PetscMatFactorInfo*,PetscMat*) int MatILUFactorSymbolic(PetscMat,PetscIS,PetscIS,PetscMatFactorInfo*,PetscMat*) int MatICCFactorSymbolic(PetscMat,PetscIS,PetscMatFactorInfo*,PetscMat*) int MatLUFactorNumeric(PetscMat,PetscMatFactorInfo*,PetscMat*) int MatILUDTFactor(PetscMat,PetscIS,PetscIS,PetscMatFactorInfo*,PetscMat*) int MatGetInertia(PetscMat,PetscInt*,PetscInt*,PetscInt*) int MatSetUnfactored(PetscMat) int MatMumpsSetIcntl(PetscMat,PetscInt,PetscInt) int MatMumpsGetIcntl(PetscMat,PetscInt,PetscInt*) int MatMumpsSetCntl(PetscMat,PetscInt,PetscReal) int MatMumpsGetCntl(PetscMat,PetscInt,PetscReal*) int MatMumpsGetInfo(PetscMat,PetscInt,PetscInt*) int MatMumpsGetInfog(PetscMat,PetscInt,PetscInt*) int MatMumpsGetRinfo(PetscMat,PetscInt,PetscReal*) int MatMumpsGetRinfog(PetscMat,PetscInt,PetscReal*) int MatForwardSolve(PetscMat,PetscVec,PetscVec) int MatBackwardSolve(PetscMat,PetscVec,PetscVec) int MatSolve(PetscMat,PetscVec,PetscVec) int MatSolveTranspose(PetscMat,PetscVec,PetscVec) int MatSolveAdd(PetscMat,PetscVec,PetscVec,PetscVec) int MatSolveTransposeAdd(PetscMat,PetscVec,PetscVec,PetscVec) int MatMatSolve(PetscMat,PetscMat,PetscMat) int MatComputeExplicitOperator(PetscMat,PetscMat*) int MatUseScaledForm(PetscMat,PetscBool) int MatScaleSystem(PetscMat,PetscVec,PetscVec) int MatUnScaleSystem(PetscMat,PetscVec,PetscVec) int MatDenseGetLocalMatrix(PetscMat,PetscMat*) int MatDenseGetArray(PetscMat,PetscScalar*[]) int MatDenseRestoreArray(PetscMat,PetscScalar*[]) cdef extern from "custom.h" nogil: int MatIsPreallocated(PetscMat,PetscBool*) int MatHasPreallocationAIJ(PetscMat,PetscBool*,PetscBool*,PetscBool*) cdef extern from "libpetsc4py.h": PetscMatType MATPYTHON int MatPythonSetContext(PetscMat,void*) int MatPythonGetContext(PetscMat,void**) int MatPythonSetType(PetscMat,char[]) # ----------------------------------------------------------------------------- cdef extern from * nogil: ctypedef PetscVec const_PetscVec "const Vec" int MatNullSpaceDestroy(PetscNullSpace*) int MatNullSpaceView(PetscNullSpace,PetscViewer) int MatNullSpaceCreate(MPI_Comm,PetscBool,PetscInt,PetscVec[], PetscNullSpace*) int MatNullSpaceCreateRigidBody(PetscVec,PetscNullSpace*) int MatNullSpaceGetVecs(PetscNullSpace,PetscBool*,PetscInt*,const_PetscVec*[]) int MatNullSpaceRemove(PetscNullSpace,PetscVec) int MatNullSpaceTest(PetscNullSpace,PetscMat) ctypedef int MatNullSpaceFunction(PetscNullSpace, PetscVec, void*) except PETSC_ERR_PYTHON int MatNullSpaceSetFunction(PetscNullSpace,MatNullSpaceFunction*,void*) int MatSetNullSpace(PetscMat,PetscNullSpace) int MatGetNullSpace(PetscMat,PetscNullSpace*) int MatSetNearNullSpace(PetscMat,PetscNullSpace) int MatGetNearNullSpace(PetscMat,PetscNullSpace*) cdef inline NullSpace ref_NullSpace(PetscNullSpace nsp): cdef NullSpace ob = NullSpace() ob.nsp = nsp PetscINCREF(ob.obj) return ob cdef int NullSpace_Function( PetscNullSpace n, PetscVec v, void * ctx, ) except PETSC_ERR_PYTHON with gil: cdef NullSpace nsp = ref_NullSpace(n) cdef Vec vec = ref_Vec(v) (function, args, kargs) = nsp.get_attr('__function__') function(nsp, vec, *args, **kargs) return 0 # ----------------------------------------------------------------------------- cdef inline Mat ref_Mat(PetscMat mat): cdef Mat ob = Mat() ob.mat = mat PetscINCREF(ob.obj) return ob # ----------------------------------------------------------------------------- # unary operations cdef Mat mat_pos(Mat self): cdef Mat mat = type(self)() CHKERR( MatDuplicate(self.mat, MAT_COPY_VALUES, &mat.mat) ) return mat cdef Mat mat_neg(Mat self): cdef Mat mat = mat_pos(self) CHKERR( MatScale(mat.mat, -1) ) return mat # inplace binary operations cdef Mat mat_iadd(Mat self, other): if isinstance(other, Mat): self.axpy(1, other) elif isinstance(other, (tuple, list)): alpha, mat = other self.axpy(alpha, mat) elif isinstance(other, Vec): self.setDiagonal(other, PETSC_ADD_VALUES) else: self.shift(other) return self cdef Mat mat_isub(Mat self, other): if isinstance(other, Mat): self.axpy(-1, other) elif isinstance(other, (tuple, list)): alpha, mat = other self.axpy(-alpha, mat) elif isinstance(other, Vec): diag = other.copy() diag.scale(-1) self.setDiagonal(diag, PETSC_ADD_VALUES) diag.destroy() else: self.shift(other) return self cdef Mat mat_imul(Mat self, other): if (isinstance(other, tuple) or isinstance(other, list)): L, R = other self.diagonalScale(L, R) else: self.scale(other) return self cdef Mat mat_idiv(Mat self, other): if isinstance(other, (tuple, list)): L, R = other if isinstance(L, Vec): L = L.copy() L.reciprocal() if isinstance(R, Vec): R = R.copy() R.reciprocal() self.diagonalScale(L, R) else: self.scale(other) return self # binary operations cdef Mat mat_add(Mat self, other): return mat_iadd(mat_pos(self), other) cdef Mat mat_sub(Mat self, other): return mat_isub(mat_pos(self), other) cdef Mat mat_mul(Mat self, other): if isinstance(other, Mat): return self.matMult(other) else: return mat_imul(mat_pos(self), other) cdef Vec mat_mul_vec(Mat self, Vec other): cdef Vec result = self.createVecLeft() self.mult(other, result) return result cdef Mat mat_div(Mat self, other): return mat_idiv(mat_pos(self), other) # reflected binary operations cdef Mat mat_radd(Mat self, other): return mat_add(self, other) cdef Mat mat_rsub(Mat self, other): cdef Mat mat = mat_sub(self, other) mat.scale(-1) return mat cdef Mat mat_rmul(Mat self, other): return mat_mul(self, other) cdef Mat mat_rdiv(Mat self, other): self; other; # unused raise NotImplementedError # ----------------------------------------------------------------------------- cdef inline PetscMatStructure matstructure(object structure) \ except (-1): if structure is None: return MAT_DIFFERENT_NONZERO_PATTERN elif structure is False: return MAT_DIFFERENT_NONZERO_PATTERN elif structure is True: return MAT_SAME_NONZERO_PATTERN else: return structure cdef inline PetscMatAssemblyType assemblytype(object assembly) \ except (-1): if assembly is None: return MAT_FINAL_ASSEMBLY elif assembly is False: return MAT_FINAL_ASSEMBLY elif assembly is True: return MAT_FLUSH_ASSEMBLY else: return assembly cdef inline PetscMatInfoType infotype(object info) \ except (-1): if info is None: return MAT_GLOBAL_SUM else: return info # ----------------------------------------------------------------------------- cdef inline int Mat_Sizes( object size, object bsize, PetscInt *r, PetscInt *c, PetscInt *m, PetscInt *n, PetscInt *M, PetscInt *N, ) except -1: # unpack row and column sizes cdef object rsize, csize try: rsize , csize = size except (TypeError, ValueError): rsize = csize = size # unpack row and column block sizes cdef object rbsize, cbsize try: rbsize , cbsize = bsize except (TypeError, ValueError): rbsize = cbsize = bsize # split row and column sizes Sys_Sizes(rsize, rbsize, r, m, M) Sys_Sizes(csize, cbsize, c, n, N) return 0 cdef inline int Mat_Create( PetscMatType mtype, object comm, object size, object bsize, PetscMat *A, ) except -1: # communicator cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) # sizes and block sizes cdef PetscInt rbs = 0, cbs = 0, m = 0, n = 0, M = 0, N = 0 Mat_Sizes(size, bsize, &rbs, &cbs, &m, &n, &M, &N) if rbs == PETSC_DECIDE: rbs = 1 if cbs == PETSC_DECIDE: cbs = rbs Sys_Layout(ccomm, rbs, &m, &M) Sys_Layout(ccomm, cbs, &n, &N) # create matrix and set sizes cdef PetscMat mat = NULL CHKERR( MatCreate(ccomm, &mat) ) CHKERR( MatSetSizes(mat, m, n, M, N) ) CHKERR( MatSetBlockSizes(mat, rbs, cbs) ) CHKERR( MatSetType(mat, mtype) ) A[0] = mat return 0 cdef inline int Mat_AllocAIJ_NNZ( PetscMat A, object NNZ) except -1: # cdef PetscBool aij=PETSC_FALSE, baij=PETSC_FALSE, sbaij=PETSC_FALSE CHKERR( MatHasPreallocationAIJ(A, &aij, &baij, &sbaij)) # local row size and block size cdef PetscInt m=0, bs=1 CHKERR( MatGetLocalSize(A, &m, NULL) ) if baij == PETSC_TRUE or sbaij == PETSC_TRUE: CHKERR( MatGetBlockSize(A, &bs) ) assert bs > 0, "block size not set" # unpack NNZ argument cdef object od_nnz, oo_nnz try: od_nnz, oo_nnz = NNZ except (TypeError, ValueError): od_nnz, oo_nnz = NNZ, None # diagonal and off-diagonal number of nonzeros cdef PetscInt d_nz=PETSC_DECIDE, d_n=0, *d_nnz=NULL if od_nnz is not None: od_nnz = iarray_i(od_nnz, &d_n, &d_nnz) if d_n == 0: d_nnz = NULL # just in case elif d_n == 1: d_nz = d_nnz[0]; d_n=0; d_nnz = NULL cdef PetscInt o_nz=PETSC_DECIDE, o_n=0, *o_nnz=NULL if oo_nnz is not None: oo_nnz = iarray_i(oo_nnz, &o_n, &o_nnz) if o_n == 0: o_nnz = NULL # just in case elif o_n == 1: o_nz = o_nnz[0]; o_n=0; o_nnz = NULL if m == PETSC_DECIDE: if d_n > 1 and d_n*bs > m: m = d_n*bs if o_n > 1 and o_n*bs > m: m = o_n*bs # check array sizes if d_n > 1 and d_n*bs != m: raise ValueError( "size(d_nnz) is %d, expected %d" % (toInt(d_n), toInt(m//bs)) ) if o_n > 1 and o_n*bs != m: raise ValueError( "size(o_nnz) is %d, expected %d" % (toInt(o_n), toInt(m//bs)) ) # preallocate if aij == PETSC_TRUE: CHKERR( MatSeqAIJSetPreallocation(A, d_nz, d_nnz) ) CHKERR( MatMPIAIJSetPreallocation(A, d_nz, d_nnz, o_nz, o_nnz) ) if baij == PETSC_TRUE: CHKERR( MatSeqBAIJSetPreallocation(A, bs, d_nz, d_nnz) ) CHKERR( MatMPIBAIJSetPreallocation(A, bs, d_nz, d_nnz, o_nz, o_nnz) ) if sbaij == PETSC_TRUE: CHKERR( MatSeqSBAIJSetPreallocation(A, bs, d_nz, d_nnz) ) CHKERR( MatMPISBAIJSetPreallocation(A, bs, d_nz, d_nnz, o_nz, o_nnz) ) return 0 cdef inline int Mat_AllocAIJ_CSR(PetscMat A, object CSR) except -1: # cdef PetscBool aij=PETSC_FALSE, baij=PETSC_FALSE, sbaij=PETSC_FALSE CHKERR( MatHasPreallocationAIJ(A, &aij, &baij, &sbaij)) # local row size and block size cdef PetscInt m=0, bs = 1 CHKERR( MatGetLocalSize(A, &m, NULL) ) if baij == PETSC_TRUE or sbaij == PETSC_TRUE: CHKERR( MatGetBlockSize(A, &bs) ) assert bs > 0, "block size not set" # unpack CSR argument cdef object oi, oj, ov try: oi, oj, ov = CSR except (TypeError, ValueError): oi, oj = CSR; ov = None # rows, cols, and values cdef PetscInt ni=0, *i=NULL cdef PetscInt nj=0, *j=NULL cdef PetscInt nv=0 cdef PetscScalar *v=NULL oi = iarray_i(oi, &ni, &i) oj = iarray_i(oj, &nj, &j) if ov is not None: ov = iarray_s(ov, &nv, &v) if m == PETSC_DECIDE: m = (ni-1)*bs # check array sizes if ((ni-1)*bs != m): raise ValueError("size(I) is %d, expected %d" % (toInt(ni), toInt(m//bs+1)) ) if (i[0] != 0): raise ValueError("I[0] is %d, expected %d" % (toInt(i[0]), toInt(0)) ) if (i[ni-1] != nj): raise ValueError("size(J) is %d, expected %d" % (toInt(nj), toInt(i[ni-1])) ) if v != NULL and (nj*bs*bs != nv): raise ValueError("size(V) is %d, expected %d" % (toInt(nv), toInt(nj*bs*bs)) ) # preallocate if aij == PETSC_TRUE: CHKERR( MatSeqAIJSetPreallocationCSR(A, i, j, v) ) CHKERR( MatMPIAIJSetPreallocationCSR(A, i, j, v) ) if baij == PETSC_TRUE: CHKERR( MatSeqBAIJSetPreallocationCSR(A, bs, i, j, v) ) CHKERR( MatMPIBAIJSetPreallocationCSR(A, bs, i, j, v) ) if sbaij == PETSC_TRUE: CHKERR( MatSeqSBAIJSetPreallocationCSR(A, bs, i, j, v) ) CHKERR( MatMPISBAIJSetPreallocationCSR(A, bs, i, j, v) ) return 0 cdef inline int Mat_AllocAIJ(PetscMat A,object NNZ, object CSR) except -1: if CSR is not None: return Mat_AllocAIJ_CSR(A, CSR) if NNZ is not None: return Mat_AllocAIJ_NNZ(A, NNZ) return 0 cdef inline object Mat_AllocDense(PetscMat A, object array): cdef PetscInt m=0, N=0 CHKERR( MatGetLocalSize(A, &m, NULL) ) CHKERR( MatGetSize(A, NULL, &N) ) cdef PetscInt size=0 cdef PetscScalar *data=NULL if array is not None: array = ofarray_s(array, &size, &data) if m*N != size: raise ValueError( "size(array) is %d, expected %dx%d=%d" % (toInt(size), toInt(m), toInt(N), toInt(m*N)) ) CHKERR( MatSeqDenseSetPreallocation(A, data) ) CHKERR( MatMPIDenseSetPreallocation(A, data) ) return array # ----------------------------------------------------------------------------- ctypedef int MatSetValuesFcn(PetscMat,PetscInt,const_PetscInt[], PetscInt,const_PetscInt[], const_PetscScalar[],PetscInsertMode) cdef inline MatSetValuesFcn* matsetvalues_fcn(int blocked, int local): cdef MatSetValuesFcn *setvalues = NULL if blocked and local: setvalues = MatSetValuesBlockedLocal elif blocked: setvalues = MatSetValuesBlocked elif local: setvalues = MatSetValuesLocal else: setvalues = MatSetValues return setvalues cdef inline int matsetvalues(PetscMat A, object oi, object oj, object ov, object oaddv, int blocked, int local) except -1: # block size cdef PetscInt rbs=1, cbs=1 if blocked: CHKERR( MatGetBlockSizes(A, &rbs, &cbs) ) if rbs < 1: rbs = 1 if cbs < 1: cbs = 1 # rows, cols, and values cdef PetscInt ni=0, *i=NULL cdef PetscInt nj=0, *j=NULL cdef PetscInt nv=0 cdef PetscScalar *v=NULL oi = iarray_i(oi, &ni, &i) oj = iarray_i(oj, &nj, &j) ov = iarray_s(ov, &nv, &v) if ni*nj*rbs*cbs != nv: raise ValueError( "incompatible array sizes: ni=%d, nj=%d, nv=%d" % (toInt(ni), toInt(nj), toInt(nv)) ) # MatSetValuesXXX function and insert mode cdef MatSetValuesFcn *setvalues = \ matsetvalues_fcn(blocked, local) cdef PetscInsertMode addv = insertmode(oaddv) # actual call CHKERR( setvalues(A, ni, i, nj, j, v, addv) ) return 0 cdef inline int matsetvalues_rcv(PetscMat A, object oi, object oj, object ov, object oaddv, int blocked, int local) except -1: # block size cdef PetscInt rbs=1, cbs=1 if blocked: CHKERR( MatGetBlockSizes(A, &rbs, &cbs) ) if rbs < 1: rbs = 1 if cbs < 1: cbs = 1 # rows, cols, and values cdef PetscInt ni=0, *i=NULL cdef PetscInt nj=0, *j=NULL cdef PetscInt nv=0 cdef PetscScalar *v=NULL cdef ndarray ai = iarray_i(oi, &ni, &i) cdef ndarray aj = iarray_i(oj, &nj, &j) cdef ndarray av = iarray_s(ov, &nv, &v) # check various dimensions if PyArray_NDIM(ai) != 2: raise ValueError( ("row indices must have two dimensions: " "rows.ndim=%d") % (PyArray_NDIM(ai)) ) elif not PyArray_ISCONTIGUOUS(ai): raise ValueError( "expecting a C-contiguous array") if PyArray_NDIM(aj) != 2: raise ValueError( ("column indices must have two dimensions: " "cols.ndim=%d") % (PyArray_NDIM(aj)) ) elif not PyArray_ISCONTIGUOUS(aj): raise ValueError( "expecting a C-contiguous array") if PyArray_NDIM(av) < 2: raise ValueError( ("values must have two or more dimensions: " "vals.ndim=%d") % (PyArray_NDIM(av)) ) elif not PyArray_ISCONTIGUOUS(av): raise ValueError( "expecting a C-contiguous array") # check various shapes cdef Py_ssize_t nm = PyArray_DIM(ai, 0) cdef Py_ssize_t si = PyArray_DIM(ai, 1) cdef Py_ssize_t sj = PyArray_DIM(aj, 1) cdef Py_ssize_t sv = PyArray_SIZE(av) // PyArray_DIM(av, 0) if ((nm != PyArray_DIM(aj, 0)) or (nm != PyArray_DIM(av, 0)) or (si*rbs * sj*cbs != sv)): raise ValueError( ("input arrays have incompatible shapes: " "rows.shape=%s, cols.shape=%s, vals.shape=%s") % (ai.shape, aj.shape, av.shape)) # MatSetValuesXXX function and insert mode cdef MatSetValuesFcn *setvalues = \ matsetvalues_fcn(blocked, local) cdef PetscInsertMode addv = insertmode(oaddv) # actual calls cdef Py_ssize_t k=0 for k from 0 <= k < nm: CHKERR( setvalues(A, si, &i[k*si], sj, &j[k*sj], &v[k*sv], addv) ) return 0 cdef inline int matsetvalues_ijv(PetscMat A, object oi, object oj, object ov, object oaddv, object om, int blocked, int local) except -1: # block size cdef PetscInt rbs=1, cbs=1 if blocked: CHKERR( MatGetBlockSizes(A, &rbs, &cbs) ) if rbs < 1: rbs = 1 if cbs < 1: cbs = 1 # column pointers, column indices, and values cdef PetscInt ni=0, *i=NULL cdef PetscInt nj=0, *j=NULL cdef PetscInt nv=0 cdef PetscScalar *v=NULL oi = iarray_i(oi, &ni, &i) oj = iarray_i(oj, &nj, &j) ov = iarray_s(ov, &nv, &v) # row indices cdef PetscInt nm=0, *m=NULL cdef PetscInt rs=0, re=ni-1 if om is not None: om = iarray_i(om, &nm, &m) else: if not local: CHKERR( MatGetOwnershipRange(A, &rs, &re) ) rs //= rbs; re //= rbs nm = re - rs # check various sizes if (ni-1 != nm): raise ValueError( "size(I) is %d, expected %d" % (toInt(ni), toInt(nm+1)) ) if (i[0] != 0):raise ValueError( "I[0] is %d, expected %d" % (toInt(i[0]), 0) ) if (i[ni-1] != nj): raise ValueError( "size(J) is %d, expected %d" % (toInt(nj), toInt(i[ni-1])) ) if (nj*rbs*cbs != nv): raise ValueError( "size(V) is %d, expected %d" % (toInt(nv), toInt(nj*rbs*cbs)) ) # MatSetValuesXXX function and insert mode cdef MatSetValuesFcn *setvalues = \ matsetvalues_fcn(blocked, local) cdef PetscInsertMode addv = insertmode(oaddv) # actual call cdef PetscInt k=0, l=0 cdef PetscInt irow=0, ncol=0, *icol=NULL cdef PetscScalar *sval=NULL for k from 0 <= k < nm: irow = m[k] if m!=NULL else rs+k ncol = i[k+1] - i[k] icol = j + i[k] if blocked: sval = v + i[k]*rbs*cbs for l from 0 <= l < ncol: CHKERR( setvalues(A, 1, &irow, 1, &icol[l], &sval[l*rbs*cbs], addv) ) else: sval = v + i[k] CHKERR( setvalues(A, 1, &irow, ncol, icol, sval, addv) ) return 0 cdef inline int matsetvalues_csr(PetscMat A, object oi, object oj, object ov, object oaddv, int blocked, int local) except -1: matsetvalues_ijv(A, oi, oj, ov, oaddv, None, blocked, local) return 0 cdef inline matgetvalues(PetscMat mat, object orows, object ocols, object values): cdef PetscInt ni=0, nj=0, nv=0 cdef PetscInt *i=NULL, *j=NULL cdef PetscScalar *v=NULL cdef ndarray rows = iarray_i(orows, &ni, &i) cdef ndarray cols = iarray_i(ocols, &nj, &j) if values is None: values = empty_s(ni*nj) values.shape = rows.shape + cols.shape values = oarray_s(values, &nv, &v) if (ni*nj != nv): raise ValueError( "incompatible array sizes: ni=%d, nj=%d, nv=%d" % (toInt(ni), toInt(nj), toInt(nv))) CHKERR( MatGetValues(mat, ni, i, nj, j, v) ) return values # ----------------------------------------------------------------------------- cdef extern from "custom.h": int MatFactorInfoDefaults(PetscBool,PetscBool,PetscMatFactorInfo*) cdef inline PetscMatFactorShiftType matfactorshifttype(object st) \ except (-1): if isinstance(st, str): if st == "none": return MAT_SHIFT_NONE if st == "nonzero": return MAT_SHIFT_NONZERO if st == "positive_definite": return MAT_SHIFT_POSITIVE_DEFINITE if st == "inblocks": return MAT_SHIFT_INBLOCKS if st == "na": return MAT_SHIFT_NONZERO if st == "pd": return MAT_SHIFT_POSITIVE_DEFINITE else: raise ValueError("unknown shift type: %s" % st) return st cdef int matfactorinfo(PetscBool inc, PetscBool chol, object opts, PetscMatFactorInfo *info) except -1: CHKERR( MatFactorInfoDefaults(inc,chol,info) ) if opts is None: return 0 cdef dict options = dict(opts) # cdef fill = options.pop('fill', None) if fill is not None: info.fill = asReal(fill) # cdef zeropivot = options.pop('zeropivot', None) if zeropivot is not None: info.zeropivot = asReal(zeropivot) # cdef levels = options.pop('levels', None) if levels is not None: info.levels = asInt(levels) cdef diagonal_fill = options.pop('diagonal_fill', None) if diagonal_fill is not None: info.diagonal_fill = (diagonal_fill) # cdef dt = options.pop('dt', None) if dt is not None: info.dt = asReal(dt) cdef dtcol = options.pop('dtcol', None) if dtcol is not None: info.dtcol = asReal(dtcol) cdef dtcount = options.pop('dtcount', None) if dtcount is not None: info.dtcount = asInt(dtcount) if ((dt is not None) or (dtcol is not None) or (dtcount is not None)): info.usedt = PETSC_TRUE # cdef shifttype = options.pop('shifttype', None) if shifttype is not None: info.shifttype = matfactorshifttype(shifttype) cdef shiftamount = options.pop('shiftamount', None) if shiftamount is not None: info.shiftamount = asReal(shiftamount) # if options: raise ValueError("unknown options: %s" % list(options.keys())) return 0 # ----------------------------------------------------------------------------- cdef object mat_getitem(Mat self, object ij): cdef PetscInt M=0, N=0 rows, cols = ij if isinstance(rows, slice): CHKERR( MatGetSize(self.mat, &M, NULL) ) start, stop, stride = rows.indices(toInt(M)) rows = arange(start, stop, stride) if isinstance(cols, slice): CHKERR( MatGetSize(self.mat, NULL, &N) ) start, stop, stride = cols.indices(toInt(N)) cols = arange(start, stop, stride) return matgetvalues(self.mat, rows, cols, None) cdef int mat_setitem(Mat self, object ij, object v) except -1: cdef PetscInt M=0, N=0 rows, cols = ij if isinstance(rows, slice): CHKERR( MatGetSize(self.mat, &M, NULL) ) start, stop, stride = rows.indices(toInt(M)) rows = arange(start, stop, stride) if isinstance(cols, slice): CHKERR( MatGetSize(self.mat, NULL, &N) ) start, stop, stride = cols.indices(toInt(N)) cols = arange(start, stop, stride) matsetvalues(self.mat, rows, cols, v, None, 0, 0) return 0 # ----------------------------------------------------------------------------- #@cython.internal cdef class _Mat_Stencil: cdef PetscMatStencil stencil property i: def __set__(self, value): self.stencil.i = asInt(value) property j: def __set__(self, value): self.stencil.j = asInt(value) property k: def __set__(self, value): self.stencil.k = asInt(value) property c: def __set__(self, value): self.stencil.c = asInt(value) property index: def __set__(self, value): cdef PetscMatStencil *s = &self.stencil s.k = s.j = s.i = 0 asDims(value, &s.i, &s.j, &s.k) property field: def __set__(self, value): cdef PetscMatStencil *s = &self.stencil s.c = asInt(value) cdef matsetvaluestencil(PetscMat A, _Mat_Stencil r, _Mat_Stencil c, object value, PetscInsertMode im, int blocked): # block size cdef PetscInt rbs=1, cbs=1 if blocked: CHKERR( MatGetBlockSizes(A, &rbs, &cbs) ) if rbs < 1: rbs = 1 if cbs < 1: cbs = 1 # values cdef PetscInt nv = 1 cdef PetscScalar *v = NULL value = iarray_s(value, &nv, &v) if rbs*cbs != nv: raise ValueError( "incompatible array sizes: nv=%d" % toInt(nv) ) if blocked: CHKERR( MatSetValuesBlockedStencil(A, 1, &r.stencil, 1, &c.stencil, v, im) ) else: CHKERR( MatSetValuesStencil(A, 1, &r.stencil, 1, &c.stencil, v, im) ) return 0 # ----------------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscrand.pxi0000644000175000001440000000170212711377604020303 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef char* PetscRandomType "const char*" PetscRandomType PETSCRAND PetscRandomType PETSCRAND48 PetscRandomType PETSCSPRNG PetscRandomType PETSCRANDER48 int PetscRandomCreate(MPI_Comm,PetscRandom*) int PetscRandomDestroy(PetscRandom*) int PetscRandomView(PetscRandom,PetscViewer) int PetscRandomSetType(PetscRandom,PetscRandomType) int PetscRandomGetType(PetscRandom,PetscRandomType*) int PetscRandomSetFromOptions(PetscRandom) int PetscRandomGetValue(PetscRandom,PetscScalar*) int PetscRandomGetValueReal(PetscRandom,PetscReal*) int PetscRandomGetValueImaginary(PetscRandom,PetscScalar*) int PetscRandomGetInterval(PetscRandom,PetscScalar*,PetscScalar*) int PetscRandomSetInterval(PetscRandom,PetscScalar,PetscScalar) int PetscRandomSetSeed(PetscRandom,unsigned long) int PetscRandomGetSeed(PetscRandom,unsigned long*) int PetscRandomSeed(PetscRandom) petsc4py-3.7.0/src/PETSc/PETSc.pyx0000644000175000001440000003345512711377604017270 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from *: ctypedef ssize_t Py_intptr_t ctypedef size_t Py_uintptr_t # -------------------------------------------------------------------- cdef extern from *: ctypedef char const_char "const char" cdef inline object bytes2str(const_char p[]): if p == NULL: return None cdef bytes s = p if isinstance(s, str): return s else: return s.decode() cdef inline object str2bytes(object s, const_char *p[]): if s is None: p[0] = NULL return None if not isinstance(s, bytes): s = s.encode() p[0] = (s) return s cdef inline object S_(const_char p[]): if p == NULL: return None cdef object s = p return s if isinstance(s, str) else s.decode() # -------------------------------------------------------------------- # Vile hack for raising a exception and not contaminating traceback cdef extern from *: enum: PETSC_ERR_PYTHON cdef extern from *: void PyErr_SetObject(object, object) void *PyExc_RuntimeError cdef object PetscError = PyExc_RuntimeError cdef inline int SETERR(int ierr) with gil: if (PetscError) != NULL: PyErr_SetObject(PetscError, ierr) else: PyErr_SetObject(PyExc_RuntimeError, ierr) return ierr cdef inline int CHKERR(int ierr) nogil except -1: if ierr == 0: return 0 # no error if ierr == PETSC_ERR_PYTHON: return -1 # error in Python call SETERR(ierr) return -1 # -------------------------------------------------------------------- # PETSc support # ------------- cdef extern from "compat.h": pass cdef extern from "custom.h": pass cdef extern from *: ctypedef long PetscInt ctypedef double PetscReal ctypedef double PetscScalar ctypedef PetscInt const_PetscInt "const PetscInt" ctypedef PetscReal const_PetscReal "const PetscReal" ctypedef PetscScalar const_PetscScalar "const PetscScalar" cdef extern from "scalar.h": object PyPetscScalar_FromPetscScalar(PetscScalar) PetscScalar PyPetscScalar_AsPetscScalar(object) except* cdef inline object toInt(PetscInt value): return value cdef inline PetscInt asInt(object value) except? -1: return value cdef inline object toReal(PetscReal value): return value cdef inline PetscReal asReal(object value) except? -1: return value cdef inline object toScalar(PetscScalar value): return PyPetscScalar_FromPetscScalar(value) cdef inline PetscScalar asScalar(object value) except*: return PyPetscScalar_AsPetscScalar(value) # -------------------------------------------------------------------- # NumPy support # ------------- include "arraynpy.pxi" import_array() IntType = PyArray_TypeObjectFromType(NPY_PETSC_INT) RealType = PyArray_TypeObjectFromType(NPY_PETSC_REAL) ScalarType = PyArray_TypeObjectFromType(NPY_PETSC_SCALAR) ComplexType = PyArray_TypeObjectFromType(NPY_PETSC_COMPLEX) # -------------------------------------------------------------------- include "petscdef.pxi" include "petscmem.pxi" include "petscopt.pxi" include "petscmpi.pxi" include "petscsys.pxi" include "petsclog.pxi" include "petscobj.pxi" include "petscvwr.pxi" include "petscrand.pxi" include "petscis.pxi" include "petscvec.pxi" include "petscsct.pxi" include "petscsec.pxi" include "petscmat.pxi" include "petscpc.pxi" include "petscksp.pxi" include "petscsnes.pxi" include "petscts.pxi" include "petsctao.pxi" include "petscao.pxi" include "petscdm.pxi" include "petscdmda.pxi" include "petscdmplex.pxi" include "petscdmcomposite.pxi" include "petscdmshell.pxi" include "petscsf.pxi" include "petscpartitioner.pxi" # -------------------------------------------------------------------- __doc__ = u""" Portable, Extensible Toolkit for Scientific Computation """ include "Const.pyx" include "Error.pyx" include "Options.pyx" include "Sys.pyx" include "Log.pyx" include "Comm.pyx" include "Object.pyx" include "Viewer.pyx" include "Random.pyx" include "IS.pyx" include "Vec.pyx" include "Scatter.pyx" include "Section.pyx" include "Mat.pyx" include "PC.pyx" include "KSP.pyx" include "SNES.pyx" include "TS.pyx" include "TAO.pyx" include "AO.pyx" include "DM.pyx" include "DMDA.pyx" include "DMPlex.pyx" include "DMComposite.pyx" include "DMShell.pyx" include "SF.pyx" include "Partitioner.pyx" # -------------------------------------------------------------------- include "CAPI.pyx" # -------------------------------------------------------------------- cdef extern from "Python.h": int Py_IsInitialized() nogil cdef extern from * nogil: int PetscTBEH(MPI_Comm,int,char*,char*, int,PetscErrorType,char*,void*) cdef object tracebacklist = [] cdef int traceback(MPI_Comm comm, int line, const_char *cfun, const_char *cfile, int n, PetscErrorType p, const_char *mess, void *ctx) with gil: cdef PetscLogDouble mem=0 cdef PetscLogDouble rss=0 cdef const_char *text=NULL global tracebacklist cdef object tbl = tracebacklist fun = bytes2str(cfun) fnm = bytes2str(cfile) m = "%s() line %d in %s" % (fun, line, fnm) tbl.insert(0, m) if p != PETSC_ERROR_INITIAL: return n # del tbl[1:] # clear any previous stuff if n == PETSC_ERR_MEM: # special case PetscMallocGetCurrentUsage(&mem) PetscMemoryGetCurrentUsage(&rss) m = ("Out of memory. " "Allocated: %d, " "Used by process: %d") % (mem, rss) tbl.append(m) else: PetscErrorMessage(n, &text, NULL) if text != NULL: tbl.append(bytes2str(text)) if mess != NULL: tbl.append(bytes2str(mess)) comm; ctx; # unused return n cdef int PetscPythonErrorHandler( MPI_Comm comm, int line, const_char *cfun, const_char *cfile, int n, PetscErrorType p, const_char *mess, void *ctx) nogil: global tracebacklist if Py_IsInitialized() and (tracebacklist) != NULL: return traceback(comm, line, cfun, cfile, n, p, mess, ctx) else: return PetscTBEH(comm, line, cfun, cfile, n, p, mess, ctx) # -------------------------------------------------------------------- cdef extern from "stdlib.h" nogil: void* malloc(size_t) void* realloc (void*,size_t) void free(void*) cdef extern from "string.h" nogil: void* memset(void*,int,size_t) void* memcpy(void*,void*,size_t) char* strdup(char*) cdef extern from "Python.h": int Py_AtExit(void (*)()) void PySys_WriteStderr(char*,...) cdef extern from "stdio.h" nogil: ctypedef struct FILE FILE *stderr int fprintf(FILE *, char *, ...) cdef extern from "initpkg.h": int PetscInitializePackageAll() cdef extern from "libpetsc4py.h": int import_libpetsc4py() except -1 int PetscPythonRegisterAll() cdef int PyPetsc_Argc = 0 cdef char** PyPetsc_Argv = NULL cdef int getinitargs(object args, int *argc, char **argv[]) except -1: # allocate command line arguments cdef int i, c = 0 cdef char **v = NULL if args is None: args = [] args = [str(a).encode() for a in args] args = [a for a in args if a] c = len(args) v = malloc((c+1)*sizeof(char*)) if v == NULL: raise MemoryError memset(v, 0, (c+1)*sizeof(char*)) try: for 0 <= i < c: v[i] = strdup(args[i]) if v[i] == NULL: raise MemoryError except: delinitargs(&c, &v); raise argc[0] = c; argv[0] = v return 0 cdef void delinitargs(int *argc, char **argv[]) nogil: # dallocate command line arguments cdef int i, c = argc[0] cdef char** v = argv[0] argc[0] = 0; argv[0] = NULL; if c >= 0 and v != NULL: for 0 <= i < c: if v[i] != NULL: free(v[i]) free(v) cdef void finalize() nogil: cdef int ierr = 0 # deallocate command line arguments global PyPetsc_Argc; global PyPetsc_Argv; delinitargs(&PyPetsc_Argc, &PyPetsc_Argv) # manage PETSc finalization if not (PetscInitializeCalled): return if (PetscFinalizeCalled): return # deinstall Python error handler ierr = PetscPopErrorHandler() if ierr != 0: fprintf(stderr, "PetscPopErrorHandler() failed " "[error code: %d]\n", ierr) # finalize PETSc ierr = PetscFinalize() if ierr != 0: fprintf(stderr, "PetscFinalize() failed " "[error code: %d]\n", ierr) # and we are done, see you later !! cdef int initialize(object args, object comm) except -1: if (PetscInitializeCalled): return 1 if (PetscFinalizeCalled): return 0 # allocate command line arguments global PyPetsc_Argc; global PyPetsc_Argv; getinitargs(args, &PyPetsc_Argc, &PyPetsc_Argv) # communicator global PETSC_COMM_WORLD PETSC_COMM_WORLD = def_Comm(comm, PETSC_COMM_WORLD) # initialize PETSc CHKERR( PetscInitialize(&PyPetsc_Argc, &PyPetsc_Argv, NULL, NULL) ) # install Python error handler cdef PetscErrorHandlerFunction handler = NULL handler = PetscPythonErrorHandler CHKERR( PetscPushErrorHandler(handler, NULL) ) # register finalization function if Py_AtExit(finalize) < 0: PySys_WriteStderr(b"warning: could not register %s with Py_AtExit()", b"PetscFinalize()") return 1 # and we are done, enjoy !! cdef extern from *: PetscClassId PETSC_OBJECT_CLASSID "PETSC_OBJECT_CLASSID" PetscClassId PETSC_VIEWER_CLASSID "PETSC_VIEWER_CLASSID" PetscClassId PETSC_RANDOM_CLASSID "PETSC_RANDOM_CLASSID" PetscClassId PETSC_IS_CLASSID "IS_CLASSID" PetscClassId PETSC_LGMAP_CLASSID "IS_LTOGM_CLASSID" PetscClassId PETSC_SF_CLASSID "PETSCSF_CLASSID" PetscClassId PETSC_VEC_CLASSID "VEC_CLASSID" PetscClassId PETSC_SCATTER_CLASSID "VEC_SCATTER_CLASSID" PetscClassId PETSC_SECTION_CLASSID "PETSC_SECTION_CLASSID" PetscClassId PETSC_MAT_CLASSID "MAT_CLASSID" PetscClassId PETSC_NULLSPACE_CLASSID "MAT_NULLSPACE_CLASSID" PetscClassId PETSC_PC_CLASSID "PC_CLASSID" PetscClassId PETSC_KSP_CLASSID "KSP_CLASSID" PetscClassId PETSC_SNES_CLASSID "SNES_CLASSID" PetscClassId PETSC_TS_CLASSID "TS_CLASSID" PetscClassId PETSC_TAO_CLASSID "TAO_CLASSID" PetscClassId PETSC_AO_CLASSID "AO_CLASSID" PetscClassId PETSC_DM_CLASSID "DM_CLASSID" PetscClassId PETSC_PARTITIONER_CLASSID "PETSCPARTITIONER_CLASSID" cdef bint registercalled = 0 cdef const char *citation = b"""\ @Article{Dalcin2011, Author = {Lisandro D. Dalcin and Rodrigo R. Paz and Pablo A. Kler and Alejandro Cosimo}, Title = {Parallel distributed computing using {P}ython}, Journal = {Advances in Water Resources}, Note = {New Computational Methods and Software Tools}, Volume = {34}, Number = {9}, Pages = {1124--1139}, Year = {2011}, DOI = {http://dx.doi.org/10.1016/j.advwatres.2011.04.013} } """ cdef int register() except -1: global registercalled if registercalled: return 0 registercalled = True # register citation CHKERR( PetscCitationsRegister(citation, NULL) ) # make sure all PETSc packages are initialized CHKERR( PetscInitializePackageAll() ) # register custom implementations import_libpetsc4py() CHKERR( PetscPythonRegisterAll() ) # register Python types PyPetscType_Register(PETSC_OBJECT_CLASSID, Object) PyPetscType_Register(PETSC_VIEWER_CLASSID, Viewer) PyPetscType_Register(PETSC_RANDOM_CLASSID, Random) PyPetscType_Register(PETSC_IS_CLASSID, IS) PyPetscType_Register(PETSC_LGMAP_CLASSID, LGMap) PyPetscType_Register(PETSC_SF_CLASSID, SF) PyPetscType_Register(PETSC_VEC_CLASSID, Vec) PyPetscType_Register(PETSC_SCATTER_CLASSID, Scatter) PyPetscType_Register(PETSC_SECTION_CLASSID, Section) PyPetscType_Register(PETSC_MAT_CLASSID, Mat) PyPetscType_Register(PETSC_NULLSPACE_CLASSID, NullSpace) PyPetscType_Register(PETSC_PC_CLASSID, PC) PyPetscType_Register(PETSC_KSP_CLASSID, KSP) PyPetscType_Register(PETSC_SNES_CLASSID, SNES) PyPetscType_Register(PETSC_TS_CLASSID, TS) PyPetscType_Register(PETSC_TAO_CLASSID, TAO) PyPetscType_Register(PETSC_AO_CLASSID, AO) PyPetscType_Register(PETSC_DM_CLASSID, DM) PyPetscType_Register(PETSC_PARTITIONER_CLASSID, Partitioner) return 0 # and we are done, enjoy !! # -------------------------------------------------------------------- def _initialize(args=None, comm=None): global tracebacklist Error._traceback_ = tracebacklist global PetscError PetscError = Error # cdef int ready = initialize(args, comm) if ready: register() # global __COMM_SELF__, __COMM_WORLD__ __COMM_SELF__.comm = PETSC_COMM_SELF __COMM_WORLD__.comm = PETSC_COMM_WORLD # global PETSC_COMM_DEFAULT PETSC_COMM_DEFAULT = PETSC_COMM_WORLD def _finalize(): finalize() # global __COMM_SELF__ __COMM_SELF__.comm = MPI_COMM_NULL global __COMM_WORLD__ __COMM_WORLD__.comm = MPI_COMM_NULL # global PETSC_COMM_DEFAULT PETSC_COMM_DEFAULT = MPI_COMM_NULL # global type_registry type_registry.clear() global stage_registry stage_registry.clear() global class_registry class_registry.clear() global event_registry event_registry.clear() global citations_registry citations_registry.clear() # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscmem.pxi0000644000175000001440000000045312711377604020137 0ustar dalcinlusers00000000000000cdef extern from * nogil: int PetscMalloc(size_t,void*) int PetscFree(void*) int PetscMemcpy(void*,void*,size_t) int PetscMemmove(void*,void*,size_t) int PetscMemzero(void*,size_t) int PetscMemcmp(void*,void*,size_t,PetscBool*) int PetscStrallocpy(const_char[],char*[]) petsc4py-3.7.0/src/PETSc/petscpc.pxi0000644000175000001440000001753012711377604017767 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef char* PetscPCType "const char*" PetscPCType PCNONE PetscPCType PCJACOBI PetscPCType PCSOR PetscPCType PCLU PetscPCType PCSHELL PetscPCType PCBJACOBI PetscPCType PCMG PetscPCType PCEISENSTAT PetscPCType PCILU PetscPCType PCICC PetscPCType PCASM PetscPCType PCGASM PetscPCType PCKSP PetscPCType PCCOMPOSITE PetscPCType PCREDUNDANT PetscPCType PCSPAI PetscPCType PCNN PetscPCType PCCHOLESKY PetscPCType PCPBJACOBI PetscPCType PCMAT PetscPCType PCHYPRE PetscPCType PCPARMS PetscPCType PCFIELDSPLIT PetscPCType PCTFS PetscPCType PCML PetscPCType PCGALERKIN PetscPCType PCEXOTIC PetscPCType PCCP PetscPCType PCBFBT PetscPCType PCLSC #PetscPCType PCPYTHON PetscPCType PCPFMG PetscPCType PCSYSPFMG PetscPCType PCREDISTRIBUTE PetscPCType PCSVD PetscPCType PCGAMG PetscPCType PCSACUSP PetscPCType PCSACUSPPOLY PetscPCType PCBICGSTABCUSP PetscPCType PCAINVCUSP PetscPCType PCBDDC PetscPCType PCKACZMARZ PetscPCType PCTELESCOPE ctypedef enum PetscPCSide "PCSide": PC_SIDE_DEFAULT PC_LEFT PC_RIGHT PC_SYMMETRIC ctypedef enum PetscPCASMType "PCASMType": PC_ASM_BASIC PC_ASM_RESTRICT PC_ASM_INTERPOLATE PC_ASM_NONE ctypedef enum PetscPCGASMType "PCGASMType": PC_GASM_BASIC PC_GASM_RESTRICT PC_GASM_INTERPOLATE PC_GASM_NONE ctypedef enum PetscPCMGType "PCMGType": PC_MG_MULTIPLICATIVE PC_MG_ADDITIVE PC_MG_FULL PC_MG_KASKADE ctypedef char* PetscPCGAMGType "const char*" PetscPCGAMGType PCGAMGAGG PetscPCGAMGType PCGAMGGEO PetscPCGAMGType PCGAMGCLASSICAL ctypedef char* PetscPCHYPREType "const char*" ctypedef enum PetscPCCompositeType "PCCompositeType": PC_COMPOSITE_ADDITIVE PC_COMPOSITE_MULTIPLICATIVE PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE PC_COMPOSITE_SPECIAL PC_COMPOSITE_SCHUR ctypedef enum PetscPCFieldSplitSchurPreType "PCFieldSplitSchurPreType": PC_FIELDSPLIT_SCHUR_PRE_SELF PC_FIELDSPLIT_SCHUR_PRE_SELFP PC_FIELDSPLIT_SCHUR_PRE_A11 PC_FIELDSPLIT_SCHUR_PRE_USER PC_FIELDSPLIT_SCHUR_PRE_FULL ctypedef enum PetscPCFieldSplitSchurFactType "PCFieldSplitSchurFactType": PC_FIELDSPLIT_SCHUR_FACT_DIAG PC_FIELDSPLIT_SCHUR_FACT_LOWER PC_FIELDSPLIT_SCHUR_FACT_UPPER PC_FIELDSPLIT_SCHUR_FACT_FULL int PCCreate(MPI_Comm,PetscPC*) int PCDestroy(PetscPC*) int PCView(PetscPC,PetscViewer) int PCSetType(PetscPC,PetscPCType) int PCGetType(PetscPC,PetscPCType*) int PCSetOptionsPrefix(PetscPC,char[]) int PCAppendOptionsPrefix(PetscPC,char[]) int PCGetOptionsPrefix(PetscPC,char*[]) int PCSetFromOptions(PetscPC) int PCSetUp(PetscPC) int PCReset(PetscPC) int PCSetUpOnBlocks(PetscPC) int PCApply(PetscPC,PetscVec,PetscVec) int PCApplyTranspose(PetscPC,PetscVec,PetscVec) int PCApplySymmetricLeft(PetscPC,PetscVec,PetscVec) int PCApplySymmetricRight(PetscPC,PetscVec,PetscVec) int PCApplyRichardson(PetscPC,PetscVec,PetscVec,PetscVec,PetscReal,PetscReal,PetscReal,PetscInt) int PCApplyBAorAB(PetscPC,PetscPCSide,PetscVec,PetscVec,PetscVec) int PCApplyBAorABTranspose(PetscPC,PetscPCSide,PetscVec,PetscVec,PetscVec) #int PCApplyTransposeExists(PetscPC,PetscBool*) #int PCApplyRichardsonExists(PetscPC,PetscBool*) int PCGetDM(PetscPC,PetscDM*) int PCSetDM(PetscPC,PetscDM) int PCSetOperators(PetscPC,PetscMat,PetscMat) int PCGetOperators(PetscPC,PetscMat*,PetscMat*) int PCGetOperatorsSet(PetscPC,PetscBool*,PetscBool*) int PCSetCoordinates(PetscPC,PetscInt,PetscInt,PetscReal[]) int PCSetUseAmat(PetscPC,PetscBool) int PCComputeExplicitOperator(PetscPC,PetscMat*) int PCDiagonalScale(PetscPC,PetscBool*) int PCDiagonalScaleLeft(PetscPC,PetscVec,PetscVec) int PCDiagonalScaleRight(PetscPC,PetscVec,PetscVec) int PCDiagonalScaleSet(PetscPC,PetscVec) int PCASMSetType(PetscPC,PetscPCASMType) int PCASMSetOverlap(PetscPC,PetscInt) int PCASMSetLocalSubdomains(PetscPC,PetscInt,PetscIS[],PetscIS[]) int PCASMSetTotalSubdomains(PetscPC,PetscInt,PetscIS[],PetscIS[]) int PCASMGetSubKSP(PetscPC,PetscInt*,PetscInt*,PetscKSP*[]) int PCGASMSetType(PetscPC,PetscPCGASMType) int PCGASMSetOverlap(PetscPC,PetscInt) int PCGAMGSetType(PetscPC,PetscPCGAMGType) int PCGAMGSetNlevels(PetscPC,PetscInt) int PCGAMGSetNSmooths(PetscPC,PetscInt) int PCHYPREGetType(PetscPC,PetscPCHYPREType*) int PCHYPRESetType(PetscPC,PetscPCHYPREType) int PCHYPRESetDiscreteCurl(PetscPC,PetscMat); int PCHYPRESetDiscreteGradient(PetscPC,PetscMat); int PCHYPRESetAlphaPoissonMatrix(PetscPC,PetscMat); int PCHYPRESetBetaPoissonMatrix(PetscPC,PetscMat); int PCHYPRESetEdgeConstantVectors(PetscPC,PetscVec,PetscVec,PetscVec); int PCFactorGetMatrix(PetscPC,PetscMat*) int PCFactorSetZeroPivot(PetscPC,PetscReal) int PCFactorSetShiftType(PetscPC,PetscMatFactorShiftType) int PCFactorSetShiftAmount(PetscPC,PetscReal) int PCFactorSetMatSolverPackage(PetscPC,PetscMatSolverPackage) int PCFactorGetMatSolverPackage(PetscPC,PetscMatSolverPackage*) int PCFactorSetUpMatSolverPackage(PetscPC) int PCFactorSetFill(PetscPC,PetscReal) int PCFactorSetColumnPivot(PetscPC,PetscReal) int PCFactorReorderForNonzeroDiagonal(PetscPC,PetscReal) int PCFactorSetMatOrderingType(PetscPC,PetscMatOrderingType) int PCFactorSetReuseOrdering(PetscPC,PetscBool ) int PCFactorSetReuseFill(PetscPC,PetscBool ) int PCFactorSetUseInPlace(PetscPC) int PCFactorSetAllowDiagonalFill(PetscPC) int PCFactorSetPivotInBlocks(PetscPC,PetscBool ) int PCFactorSetLevels(PetscPC,PetscInt) int PCFactorSetDropTolerance(PetscPC,PetscReal,PetscReal,PetscInt) int PCFieldSplitSetType(PetscPC,PetscPCCompositeType) int PCFieldSplitSetBlockSize(PetscPC,PetscInt) int PCFieldSplitSetFields(PetscPC,char[],PetscInt,PetscInt*,PetscInt*) int PCFieldSplitSetIS(PetscPC,char[],PetscIS) int PCFieldSplitGetSubKSP(PetscPC,PetscInt*,PetscKSP*[]) int PCFieldSplitSetSchurPre(PetscPC,PetscPCFieldSplitSchurPreType,PetscMat) int PCFieldSplitSetSchurFactType(PetscPC,PetscPCFieldSplitSchurFactType) #int PCFieldSplitGetSchurBlocks(PetscPC,PetscMat*,PetscMat*,PetscMat*,PetscMat*) int PCCompositeSetType(PetscPC,PetscPCCompositeType) int PCCompositeGetPC(PetscPC,PetscInt,PetscPC*) int PCCompositeAddPC(PetscPC,PetscPCType) int PCKSPGetKSP(PetscPC,PetscKSP*) int PCSetReusePreconditioner(PetscPC,PetscBool) # --- MG --- int PCMGSetType(PetscPC,PetscPCMGType) int PCMGGetType(PetscPC,PetscPCMGType*) int PCMGSetInterpolation(PetscPC,PetscInt,PetscMat) int PCMGGetInterpolation(PetscPC,PetscInt,PetscMat*) int PCMGSetRestriction(PetscPC,PetscInt,PetscMat) int PCMGGetRestriction(PetscPC,PetscInt,PetscMat*) int PCMGSetRScale(PetscPC,PetscInt,PetscVec) int PCMGGetRScale(PetscPC,PetscInt,PetscVec*) int PCMGGetSmoother(PetscPC,PetscInt,PetscKSP*) int PCMGGetSmootherUp(PetscPC,PetscInt,PetscKSP*) int PCMGGetSmootherDown(PetscPC,PetscInt,PetscKSP*) int PCMGGetCoarseSolve(PetscPC,PetscKSP*) int PCMGSetRhs(PetscPC,PetscInt,PetscVec) int PCMGSetX(PetscPC,PetscInt,PetscVec) int PCMGSetR(PetscPC,PetscInt,PetscVec) int PCMGGetLevels(PetscPC,PetscInt*) int PCMGSetCyclesOnLevel(PetscPC,PetscInt,PetscInt) # -------------------------------------------------------------------- cdef extern from "libpetsc4py.h": PetscPCType PCPYTHON int PCPythonSetContext(PetscPC,void*) int PCPythonGetContext(PetscPC,void**) int PCPythonSetType(PetscPC,char[]) # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petsctao.pxi0000644000175000001440000002743212711377604020152 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef char* PetscTAOType "const char*" PetscTAOType TAOLMVM PetscTAOType TAONLS PetscTAOType TAONTR PetscTAOType TAONTL PetscTAOType TAOCG PetscTAOType TAOTRON PetscTAOType TAOOWLQN PetscTAOType TAOBMRM PetscTAOType TAOBLMVM PetscTAOType TAOBQPIP PetscTAOType TAOGPCG PetscTAOType TAONM PetscTAOType TAOPOUNDERS PetscTAOType TAOLCL PetscTAOType TAOSSILS PetscTAOType TAOSSFLS PetscTAOType TAOASILS PetscTAOType TAOASFLS PetscTAOType TAOIPM PetscTAOType TAOTEST ctypedef enum PetscTAOConvergedReason "TaoConvergedReason": #iterating TAO_CONTINUE_ITERATING # converged TAO_CONVERGED_GATOL TAO_CONVERGED_GRTOL TAO_CONVERGED_GTTOL TAO_CONVERGED_STEPTOL TAO_CONVERGED_MINF TAO_CONVERGED_USER # diverged TAO_DIVERGED_MAXITS TAO_DIVERGED_NAN TAO_DIVERGED_MAXFCN TAO_DIVERGED_LS_FAILURE TAO_DIVERGED_TR_REDUCTION TAO_DIVERGED_USER int TaoView(PetscTAO,PetscViewer) int TaoDestroy(PetscTAO*) int TaoCreate(MPI_Comm,PetscTAO*) int TaoSetOptionsPrefix(PetscTAO, char[]) int TaoGetOptionsPrefix(PetscTAO, char*[]) int TaoSetFromOptions(PetscTAO) int TaoSetType(PetscTAO,PetscTAOType) int TaoGetType(PetscTAO,PetscTAOType*) int TaoSetUp(PetscTAO) int TaoSolve(PetscTAO) int TaoSetTolerances(PetscTAO,PetscReal,PetscReal,PetscReal) int TaoGetTolerances(PetscTAO,PetscReal*,PetscReal*,PetscReal*) int TaoSetConstraintTolerances(PetscTAO,PetscReal,PetscReal) int TaoGetConstraintTolerances(PetscTAO,PetscReal*,PetscReal*) int TaoSetFunctionLowerBound(PetscTAO,PetscReal) int TaoSetMaximumIterates(PetscTAO, PetscInt) int TaoSetMaximumFunctionEvaluations(PetscTAO, PetscInt) int TaoSetTrustRegionTolerance(PetscTAO,PetscReal) int TaoGetInitialTrustRegionRadius(PetscTAO,PetscReal*) int TaoGetTrustRegionRadius(PetscTAO,PetscReal*) int TaoSetTrustRegionRadius(PetscTAO,PetscReal) ctypedef int TaoConvergenceTest(PetscTAO,void*) except PETSC_ERR_PYTHON int TaoDefaultConvergenceTest(PetscTAO tao,void *dummy) except PETSC_ERR_PYTHON int TaoSetConvergenceTest(PetscTAO, TaoConvergenceTest*, void*) int TaoSetConvergedReason(PetscTAO,PetscTAOConvergedReason) int TaoGetConvergedReason(PetscTAO,PetscTAOConvergedReason*) int TaoGetSolutionStatus(PetscTAO,PetscInt*, PetscReal*,PetscReal*, PetscReal*,PetscReal*, PetscTAOConvergedReason*) ctypedef int TaoMonitor(PetscTAO,void*) except PETSC_ERR_PYTHON ctypedef int (*TaoMonitorDestroy)(void**) int TaoSetMonitor(PetscTAO,TaoMonitor,void*,TaoMonitorDestroy) int TaoCancelMonitors(PetscTAO) int TaoComputeObjective(PetscTAO,PetscVec,PetscReal*) int TaoComputeSeparableObjective(PetscTAO,PetscVec,PetscVec) int TaoComputeGradient(PetscTAO,PetscVec,PetscVec) int TaoComputeObjectiveAndGradient(PetscTAO,PetscVec,PetscReal*,PetscVec) int TaoComputeConstraints(PetscTAO,PetscVec,PetscVec) int TaoComputeDualVariables(PetscTAO,PetscVec,PetscVec) int TaoComputeVariableBounds(PetscTAO) int TaoComputeHessian (PetscTAO,PetscVec,PetscMat,PetscMat) int TaoComputeJacobian(PetscTAO,PetscVec,PetscMat,PetscMat) int TaoSetInitialVector(PetscTAO,PetscVec) int TaoSetConstraintsVec(PetscTAO,PetscVec) int TaoSetVariableBounds(PetscTAO,PetscVec,PetscVec) int TaoSetHessianMat(PetscTAO,PetscMat,PetscMat) int TaoSetJacobianMat(PetscTAO,PetscMat,PetscMat) int TaoGetSolutionVector(PetscTAO,PetscVec*) int TaoGetGradientVector(PetscTAO,PetscVec*) int TaoSetGradientNorm(PetscTAO,PetscMat) int TaoGetGradientNorm(PetscTAO,PetscMat*) int TaoLMVMSetH0(PetscTAO,PetscMat) int TaoLMVMGetH0(PetscTAO,PetscMat*) int TaoLMVMGetH0KSP(PetscTAO,PetscKSP*) int TaoGetVariableBounds(PetscTAO,PetscVec*,PetscVec*) #int TaoGetConstraintsVec(PetscTAO,PetscVec*) #int TaoGetVariableBoundVecs(PetscTAO,PetscVec*,PetscVec*) #int TaoGetHessianMat(PetscTAO,PetscMat*,PetscMat*) #int TaoGetJacobianMat(PetscTAO,PetscMat*,PetscMat*) ctypedef int TaoObjective(PetscTAO,PetscVec,PetscReal*,void*) except PETSC_ERR_PYTHON ctypedef int TaoSeparableObjective(PetscTAO,PetscVec,PetscVec,void*) except PETSC_ERR_PYTHON ctypedef int TaoGradient(PetscTAO,PetscVec,PetscVec,void*) except PETSC_ERR_PYTHON ctypedef int TaoObjGrad(PetscTAO,PetscVec,PetscReal*,PetscVec,void*) except PETSC_ERR_PYTHON ctypedef int TaoVarBounds(PetscTAO,PetscVec,PetscVec,void*) except PETSC_ERR_PYTHON ctypedef int TaoConstraints(PetscTAO,PetscVec,PetscVec,void*) except PETSC_ERR_PYTHON ctypedef int TaoHessian(PetscTAO,PetscVec, PetscMat,PetscMat, void*) except PETSC_ERR_PYTHON ctypedef int TaoJacobian(PetscTAO,PetscVec, PetscMat,PetscMat, void*) except PETSC_ERR_PYTHON ctypedef int TaoJacobianState(PetscTAO,PetscVec, PetscMat,PetscMat,PetscMat, void*) except PETSC_ERR_PYTHON ctypedef int TaoJacobianDesign(PetscTAO,PetscVec,PetscMat, void*) except PETSC_ERR_PYTHON int TaoSetObjectiveRoutine(PetscTAO,TaoObjective*,void*) int TaoSetSeparableObjectiveRoutine(PetscTAO,PetscVec,TaoSeparableObjective,void*) int TaoSetGradientRoutine(PetscTAO,TaoGradient*,void*) int TaoSetObjectiveAndGradientRoutine(PetscTAO,TaoObjGrad*,void*) int TaoSetVariableBoundsRoutine(PetscTAO,TaoVarBounds*,void*) int TaoSetConstraintsRoutine(PetscTAO,PetscVec,TaoConstraints*,void*) int TaoSetHessianRoutine(PetscTAO,PetscMat,PetscMat,TaoHessian*,void*) int TaoSetJacobianRoutine(PetscTAO,PetscMat,PetscMat,TaoJacobian*,void*) int TaoSetStateDesignIS(PetscTAO,PetscIS,PetscIS) int TaoSetJacobianStateRoutine(PetscTAO,PetscMat,PetscMat,PetscMat,TaoJacobianState*,void*) int TaoSetJacobianDesignRoutine(PetscTAO,PetscMat,TaoJacobianDesign*,void*) int TaoSetInitialTrustRegionRadius(PetscTAO,PetscReal) int TaoGetKSP(PetscTAO,PetscKSP*) # -------------------------------------------------------------------- cdef inline TAO ref_TAO(PetscTAO tao): cdef TAO ob = TAO() ob.tao = tao PetscINCREF(ob.obj) return ob # -------------------------------------------------------------------- cdef int TAO_Objective(PetscTAO _tao, PetscVec _x, PetscReal *_f, void *ctx) except PETSC_ERR_PYTHON with gil: cdef TAO tao = ref_TAO(_tao) cdef Vec x = ref_Vec(_x) (objective, args, kargs) = tao.get_attr("__objective__") retv = objective(tao, x, *args, **kargs) _f[0] = asReal(retv) return 0 cdef int TAO_SeparableObjective(PetscTAO _tao, PetscVec _x, PetscVec _f, void *ctx) except PETSC_ERR_PYTHON with gil: cdef TAO tao = ref_TAO(_tao) cdef Vec x = ref_Vec(_x) cdef Vec f = ref_Vec(_f) (separable, args, kargs) = tao.get_attr("__separable__") separable(tao, x, f, *args, **kargs) return 0 cdef int TAO_Gradient(PetscTAO _tao, PetscVec _x, PetscVec _g, void *ctx) except PETSC_ERR_PYTHON with gil: cdef TAO tao = ref_TAO(_tao) cdef Vec x = ref_Vec(_x) cdef Vec g = ref_Vec(_g) (gradient, args, kargs) = tao.get_attr("__gradient__") gradient(tao, x, g, *args, **kargs) return 0 cdef int TAO_ObjGrad(PetscTAO _tao, PetscVec _x, PetscReal *_f, PetscVec _g, void *ctx) except PETSC_ERR_PYTHON with gil: cdef TAO tao = ref_TAO(_tao) cdef Vec x = ref_Vec(_x) cdef Vec g = ref_Vec(_g) (objgrad, args, kargs) = tao.get_attr("__objgrad__") retv = objgrad(tao, x, g, *args, **kargs) _f[0] = asReal(retv) return 0 cdef int TAO_Constraints(PetscTAO _tao, PetscVec _x, PetscVec _r, void *ctx) except PETSC_ERR_PYTHON with gil: cdef TAO tao = ref_TAO(_tao) cdef Vec x = ref_Vec(_x) cdef Vec r = ref_Vec(_r) (constraints, args, kargs) = tao.get_attr("__constraints__") constraints(tao, x, r, *args, **kargs) return 0 cdef int TAO_VarBounds(PetscTAO _tao, PetscVec _xl, PetscVec _xu, void *ctx) except PETSC_ERR_PYTHON with gil: cdef TAO tao = ref_TAO(_tao) cdef Vec xl = ref_Vec(_xl) cdef Vec xu = ref_Vec(_xu) (varbounds, args, kargs) = tao.get_attr("__varbounds__") varbounds(tao, xl, xu, *args, **kargs) return 0 cdef int TAO_Hessian(PetscTAO _tao, PetscVec _x, PetscMat _H, PetscMat _P, void* ctx) except PETSC_ERR_PYTHON with gil: cdef TAO tao = ref_TAO(_tao) cdef Vec x = ref_Vec(_x) cdef Mat H = ref_Mat(_H) cdef Mat P = ref_Mat(_P) (hessian, args, kargs) = tao.get_attr("__hessian__") hessian(tao, x, H, P, *args, **kargs) return 0 cdef int TAO_Jacobian(PetscTAO _tao, PetscVec _x, PetscMat _J, PetscMat _P, void* ctx) except PETSC_ERR_PYTHON with gil: cdef TAO tao = ref_TAO(_tao) cdef Vec x = ref_Vec(_x) cdef Mat J = ref_Mat(_J) cdef Mat P = ref_Mat(_P) (jacobian, args, kargs) = tao.get_attr("__jacobian__") jacobian(tao, x, J, P, *args, **kargs) return 0 cdef int TAO_JacobianState(PetscTAO _tao, PetscVec _x, PetscMat _J, PetscMat _P, PetscMat _I, void* ctx) except PETSC_ERR_PYTHON with gil: cdef TAO tao = ref_TAO(_tao) cdef Vec x = ref_Vec(_x) cdef Mat J = ref_Mat(_J) cdef Mat P = ref_Mat(_P) cdef Mat I = ref_Mat(_I) (jacobian, args, kargs) = tao.get_attr("__jacobian_state__") jacobian(tao, x, J, P, I, *args, **kargs) return 0 cdef int TAO_JacobianDesign(PetscTAO _tao, PetscVec _x, PetscMat _J, void* ctx) except PETSC_ERR_PYTHON with gil: cdef TAO tao = ref_TAO(_tao) cdef Vec x = ref_Vec(_x) cdef Mat J = ref_Mat(_J) (jacobian, args, kargs) = tao.get_attr("__jacobian_design__") jacobian(tao, x, J, *args, **kargs) return 0 cdef int TAO_Converged(PetscTAO _tao, void* ctx) except PETSC_ERR_PYTHON with gil: # call first the default convergence test CHKERR( TaoDefaultConvergenceTest(_tao, NULL) ) # call next the user-provided convergence test cdef TAO tao = ref_TAO(_tao) (converged, args, kargs) = tao.get_attr('__converged__') reason = converged(tao, *args, **kargs) if reason is None: return 0 # handle value of convergence reason cdef PetscTAOConvergedReason creason = TAO_CONTINUE_ITERATING if reason is False or reason == -1: creason = TAO_DIVERGED_USER elif reason is True or reason == 1: creason = TAO_CONVERGED_USER else: creason = reason assert creason >= TAO_DIVERGED_USER assert creason <= TAO_CONVERGED_USER CHKERR( TaoSetConvergedReason(_tao, creason) ) return 0 cdef int TAO_Monitor(PetscTAO _tao, void* ctx) except PETSC_ERR_PYTHON with gil: cdef TAO tao = ref_TAO(_tao) cdef object monitorlist = tao.get_attr('__monitor__') if monitorlist is None: return 0 for (monitor, args, kargs) in monitorlist: monitor(tao, *args, **kargs) return 0 # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscdmplex.pxi0000644000175000001440000001641112711377604020653 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from * nogil: int DMPlexCreate(MPI_Comm,PetscDM*) int DMPlexCreateCohesiveSubmesh(PetscDM,PetscBool,const_char[],PetscInt,PetscDM*) int DMPlexCreateFromCellList(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscInt,PetscBool,int[],PetscInt,double[],PetscDM*) #int DMPlexCreateFromDAG(PetscDM,PetscInt,const_PetscInt[],const_PetscInt[],const_PetscInt[],const_PetscInt[],const_PetscScalar[]) int DMPlexGetChart(PetscDM,PetscInt*,PetscInt*) int DMPlexSetChart(PetscDM,PetscInt,PetscInt) int DMPlexGetConeSize(PetscDM,PetscInt,PetscInt*) int DMPlexSetConeSize(PetscDM,PetscInt,PetscInt) int DMPlexGetCone(PetscDM,PetscInt,const_PetscInt*[]) int DMPlexSetCone(PetscDM,PetscInt,const_PetscInt[]) int DMPlexInsertCone(PetscDM,PetscInt,PetscInt,PetscInt) int DMPlexInsertConeOrientation(PetscDM,PetscInt,PetscInt,PetscInt) int DMPlexGetConeOrientation(PetscDM,PetscInt,const_PetscInt*[]) int DMPlexSetConeOrientation(PetscDM,PetscInt,const_PetscInt[]) int DMPlexGetSupportSize(PetscDM,PetscInt,PetscInt*) int DMPlexSetSupportSize(PetscDM,PetscInt,PetscInt) int DMPlexGetSupport(PetscDM,PetscInt,const_PetscInt*[]) int DMPlexSetSupport(PetscDM,PetscInt,const_PetscInt[]) #int DMPlexInsertSupport(PetscDM,PetscInt,PetscInt,PetscInt) #int DMPlexGetConeSection(PetscDM,PetscSection*) #int DMPlexGetSupportSection(PetscDM,PetscSection*) #int DMPlexGetCones(PetscDM,PetscInt*[]) #int DMPlexGetConeOrientations(PetscDM,PetscInt*[]) int DMPlexGetMaxSizes(PetscDM,PetscInt*,PetscInt*) int DMPlexSymmetrize(PetscDM) int DMPlexStratify(PetscDM) #int DMPlexEqual(PetscDM,PetscDM,PetscBool*) int DMPlexOrient(PetscDM) #int DMPlexInterpolate(PetscDM,PetscDM*) #int DMPlexUninterpolate(PetscDM,PetscDM*) #int DMPlexLoad(PetscViewer,PetscDM) #int DMPlexSetPreallocationCenterDimension(PetscDM,PetscInt) #int DMPlexGetPreallocationCenterDimension(PetscDM,PetscInt*) #int DMPlexPreallocateOperator(PetscDM,PetscInt,PetscSection,PetscSection,PetscInt[],PetscInt[],PetscInt[],PetscInt[],Mat,PetscBool) #int DMPlexGetPointLocal(PetscDM,PetscInt,PetscInt*,PetscInt*) #int DMPlexPointLocalRef(PetscDM,PetscInt,PetscScalar*,void*) #int DMPlexPointLocalRead(PetscDM,PetscInt,const_PetscScalar*,const_void*) #int DMPlexGetPointGlobal(PetscDM,PetscInt,PetscInt*,PetscInt*) #int DMPlexPointGlobalRef(PetscDM,PetscInt,PetscScalar*,void*) #int DMPlexPointGlobalRead(PetscDM,PetscInt,const_PetscScalar*,const_void*) #int PetscSectionCreateGlobalSectionLabel(PetscSection,PetscSF,PetscBool,PetscDMLabel,PetscInt,PetscSection*) int DMPlexGetCellNumbering(PetscDM,PetscIS*) int DMPlexGetVertexNumbering(PetscDM,PetscIS*) int DMPlexCreatePointNumbering(PetscDM,PetscIS*) int DMPlexGetDepth(PetscDM,PetscInt*) #int DMPlexGetDepthLabel(PetscDM,PetscDMLabel*) int DMPlexGetDepthStratum(PetscDM,PetscInt,PetscInt*,PetscInt*) int DMPlexGetHeightStratum(PetscDM,PetscInt,PetscInt*,PetscInt*) int DMPlexGetMeet(PetscDM,PetscInt,const_PetscInt[],PetscInt*,const_PetscInt**) #int DMPlexGetFullMeet(PetscDM,PetscInt,const_PetscInt[],PetscInt*,const_PetscInt**) int DMPlexRestoreMeet(PetscDM,PetscInt,const_PetscInt[],PetscInt*,const_PetscInt**) int DMPlexGetJoin(PetscDM,PetscInt,const_PetscInt[],PetscInt*,const_PetscInt**) #int DMPlexGetFullJoin(PetscDM,PetscInt,const_PetscInt[],PetscInt*,const_PetscInt**) int DMPlexRestoreJoin(PetscDM,PetscInt,const_PetscInt[],PetscInt*,const_PetscInt**) int DMPlexGetTransitiveClosure(PetscDM,PetscInt,PetscBool,PetscInt*,PetscInt*[]) int DMPlexRestoreTransitiveClosure(PetscDM,PetscInt,PetscBool,PetscInt*,PetscInt*[]) int DMPlexVecGetClosure(PetscDM,PetscSection,PetscVec,PetscInt,PetscInt*,PetscScalar*[]) int DMPlexVecRestoreClosure(PetscDM,PetscSection,PetscVec,PetscInt,PetscInt*,PetscScalar*[]) int DMPlexGenerate(PetscDM,const_char[],PetscBool ,PetscDM*) int DMPlexTriangleSetOptions(PetscDM,const_char*) int DMPlexTetgenSetOptions(PetscDM,const_char*) #int DMPlexCopyCoordinates(PetscDM,PetscDM) #int DMPlexCreateDoublet(MPI_Comm,PetscInt,PetscBool,PetscBool,PetscBool,PetscReal,PetscDM*) int DMPlexCreateSquareBoundary(PetscDM,const_PetscReal[],const_PetscReal[],const_PetscInt[]) int DMPlexCreateCubeBoundary(PetscDM,const_PetscReal[],const_PetscReal[],const_PetscInt[]) int DMPlexCreateBoxMesh(MPI_Comm,PetscInt,PetscBool,PetscDM*) int DMPlexCreateHexBoxMesh(MPI_Comm,PetscInt,const_PetscInt[],PetscDMBoundaryType,PetscDMBoundaryType,PetscDMBoundaryType,PetscDM*) int DMPlexCreateCGNS(MPI_Comm,PetscInt,PetscBool,PetscDM*) int DMPlexCreateCGNSFromFile(MPI_Comm,const_char[],PetscBool,PetscDM*) int DMPlexCreateExodus(MPI_Comm,PetscInt,PetscBool,PetscDM*) int DMPlexCreateExodusFromFile(MPI_Comm,const_char[],PetscBool,PetscDM*) int DMPlexCreateGmsh(MPI_Comm,PetscViewer,PetscBool,PetscDM*) #int DMPlexCreateConeSection(PetscDM,PetscSection*) #int DMPlexInvertCell(PetscInt,PetscInt,int[]) #int DMPlexCheckSymmetry(PetscDM) #int DMPlexCheckSkeleton(PetscDM,PetscBool,PetscInt) #int DMPlexCheckFaces(PetscDM,PetscBool,PetscInt) int DMPlexSetAdjacencyUseCone(PetscDM,PetscBool) int DMPlexSetAdjacencyUseClosure(PetscDM,PetscBool) #int DMPlexCreateNeighborCSR(PetscDM,PetscInt,PetscInt*,PetscInt**,PetscInt**) #int DMPlexCreatePartition(PetscDM,const_char[],PetscInt,PetscBool,PetscSection*,PetscIS*,PetscSection*,PetscIS*) #int DMPlexCreatePartitionClosure(PetscDM,PetscSection,PetscIS,PetscSection*,PetscIS*) int DMPlexDistribute(PetscDM,PetscInt,PetscSF*,PetscDM*) int DMPlexDistributeOverlap(PetscDM,PetscInt,PetscSF*,PetscDM*) int DMPlexGetPartitioner(PetscDM,PetscPartitioner*) int DMPlexDistributeField(PetscDM,PetscSF,PetscSection,PetscVec,PetscSection,PetscVec) #int DMPlexDistributeData(PetscDM,PetscSF,PetscSection,MPI_Datatype,void*,PetscSection,void**) int DMPlexGetOrdering(PetscDM,PetscMatOrderingType,PetscDMLabel,PetscIS*) int DMPlexPermute(PetscDM,PetscIS,PetscDM*) #int DMPlexCreateSubmesh(PetscDM,PetscDMLabel,PetscInt,PetscDM*) #int DMPlexCreateHybridMesh(PetscDM,PetscDMLabel,PetscDMLabel*,PetscDM*) #int DMPlexGetSubpointMap(PetscDM,PetscDMLabel*) #int DMPlexSetSubpointMap(PetscDM,PetscDMLabel) #int DMPlexCreateSubpointIS(PetscDM,PetscIS*) int DMPlexCreateCoarsePointIS(PetscDM,PetscIS*) int DMPlexMarkBoundaryFaces(PetscDM,PetscDMLabel) #int DMPlexLabelComplete(PetscDM,PetscDMLabel) #int DMPlexLabelCohesiveComplete(PetscDM,PetscDMLabel,PetscBool,PetscDM) int DMPlexGetRefinementLimit(PetscDM,PetscReal*) int DMPlexSetRefinementLimit(PetscDM,PetscReal) int DMPlexGetRefinementUniform(PetscDM,PetscBool*) int DMPlexSetRefinementUniform(PetscDM,PetscBool) #int DMPlexGetNumFaceVertices(PetscDM,PetscInt,PetscInt,PetscInt*) #int DMPlexGetOrientedFace(PetscDM,PetscInt,PetscInt,const_PetscInt[],PetscInt,PetscInt[],PetscInt[],PetscInt[],PetscBool*) int DMPlexCreateSection(PetscDM,PetscInt,PetscInt,const_PetscInt[],const_PetscInt[],PetscInt,const_PetscInt[],const_PetscIS[],const_PetscIS[],PetscIS,PetscSection*) int DMPlexComputeCellGeometryFVM(PetscDM,PetscInt,PetscReal*,PetscReal[],PetscReal[]) petsc4py-3.7.0/src/PETSc/petscobj.pxi0000644000175000001440000001236212711377604020135 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from * nogil: ctypedef int PetscClassId int PetscObjectCreate(MPI_Comm,PetscObject*) int PetscObjectView(PetscObject,PetscViewer) int PetscObjectDestroy(PetscObject*) int PetscObjectGetReference(PetscObject,PetscInt*) int PetscObjectReference(PetscObject) int PetscObjectDereference(PetscObject) int PetscObjectSetOptionsPrefix(PetscObject,char[]) int PetscObjectGetOptionsPrefix(PetscObject,char*[]) int PetscObjectSetFromOptions(PetscObject) int PetscObjectGetComm(PetscObject,MPI_Comm*) int PetscObjectGetClassId(PetscObject,PetscClassId*) int PetscObjectGetType(PetscObject,char*[]) int PetscObjectGetClassName(PetscObject,char*[]) int PetscObjectSetName(PetscObject,char[]) int PetscObjectGetName(PetscObject,char*[]) int PetscObjectStateIncrease(PetscObject) int PetscObjectTypeCompare(PetscObject,char[],PetscBool*) int PetscObjectCompose(PetscObject,char[],PetscObject) int PetscObjectQuery(PetscObject,char[],PetscObject*) int PetscObjectIncrementTabLevel(PetscObject,PetscObject,PetscInt) int PetscObjectGetTabLevel(PetscObject,PetscInt*) int PetscObjectSetTabLevel(PetscObject,PetscInt) # -------------------------------------------------------------------- cdef inline int PetscINCREF(PetscObject *obj) nogil: if obj == NULL: return 0 if obj[0] == NULL: return 0 return PetscObjectReference(obj[0]) cdef inline int PetscCLEAR(PetscObject* obj) nogil: if obj == NULL: return 0 if obj[0] == NULL: return 0 cdef PetscObject tmp tmp = obj[0]; obj[0] = NULL return PetscObjectDestroy(&tmp) cdef inline int PetscDEALLOC(PetscObject* obj) nogil: if obj == NULL: return 0 if obj[0] == NULL: return 0 cdef PetscObject tmp tmp = obj[0]; obj[0] = NULL if not (PetscInitializeCalled): return 0 if (PetscFinalizeCalled): return 0 return PetscObjectDestroy(&tmp) cdef inline int PetscINCSTATE(PetscObject *obj) nogil: if obj == NULL: return 0 if obj[0] == NULL: return 0 return PetscObjectStateIncrease(obj[0]) # -------------------------------------------------------------------- cdef extern from *: ctypedef struct PyObject void _Py_DecRef"Py_DECREF"(PyObject*) PyObject* PyDict_New() except NULL PyObject* PyDict_GetItem(PyObject*, PyObject*) except * int PyDict_SetItem(PyObject*, PyObject*, PyObject*) except -1 int PyDict_DelItem(PyObject*, PyObject*) except -1 cdef extern from * nogil: ctypedef struct _p_PetscObject: void *python_context int (*python_destroy)(void*) cdef inline void Py_DecRef(PyObject *ob) with gil: _Py_DecRef(ob) cdef int PetscDelPyDict(void* ptr) nogil: if ptr != NULL and Py_IsInitialized(): Py_DecRef(ptr) return 0 cdef object PetscGetPyDict(PetscObject obj, bint create): if obj.python_context != NULL: return obj.python_context if create: obj.python_destroy = PetscDelPyDict obj.python_context = PyDict_New() return obj.python_context return None cdef object PetscGetPyObj(PetscObject o, char name[]): cdef object dct = PetscGetPyDict(o, False) if dct is None: return None cdef object key = bytes2str(name) cdef PyObject *d = dct cdef PyObject *k = key cdef PyObject *v = NULL v = PyDict_GetItem(d, k) if v != NULL: return v return None cdef object PetscSetPyObj(PetscObject o, char name[], object p): cdef object dct if p is not None: dct = PetscGetPyDict(o, True) else: dct = PetscGetPyDict(o, False) if dct is None: return None cdef str key = bytes2str(name) cdef PyObject *d = dct cdef PyObject *k = key cdef PyObject *v = p PyDict_SetItem(d, k, v) if v == None: PyDict_DelItem(d, k) return None # -------------------------------------------------------------------- cdef extern from *: object PyLong_FromVoidPtr(void*) cdef inline long Object_toFortran(PetscObject o) nogil: return o # -------------------------------------------------------------------- cdef inline type subtype_DM(PetscDM dm): cdef PetscObject obj = dm if obj == NULL: return DM # --- cdef PetscBool match = PETSC_FALSE CHKERR( PetscObjectTypeCompare(obj, b"da", &match) ) if match == PETSC_TRUE: return DMDA CHKERR( PetscObjectTypeCompare(obj, b"plex", &match) ) if match == PETSC_TRUE: return DMPlex CHKERR( PetscObjectTypeCompare(obj, b"composite", &match) ) if match == PETSC_TRUE: return DMComposite CHKERR( PetscObjectTypeCompare(obj, b"shell", &match) ) if match == PETSC_TRUE: return DMShell # --- return DM cdef inline type subtype_Object(PetscObject obj): cdef type klass = Object if obj == NULL: return klass cdef PetscClassId classid = 0 CHKERR( PetscObjectGetClassId(obj,&classid) ) if classid == PETSC_DM_CLASSID: klass = subtype_DM(obj) else: klass = PyPetscType_Lookup(classid) return klass # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/Const.pyx0000644000175000001440000000425012711377604017427 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- DECIDE = PETSC_DECIDE DEFAULT = PETSC_DEFAULT DETERMINE = PETSC_DETERMINE # -------------------------------------------------------------------- INFINITY = toReal(PETSC_INFINITY) NINFINITY = toReal(PETSC_NINFINITY) PINFINITY = toReal(PETSC_INFINITY) # -------------------------------------------------------------------- class InsertMode(object): # native NOT_SET_VALUES = PETSC_NOT_SET_VALUES INSERT_VALUES = PETSC_INSERT_VALUES ADD_VALUES = PETSC_ADD_VALUES MAX_VALUES = PETSC_MAX_VALUES INSERT_ALL_VALUES = PETSC_INSERT_ALL_VALUES ADD_ALL_VALUES = PETSC_ADD_ALL_VALUES INSERT_BC_VALUES = PETSC_INSERT_BC_VALUES ADD_BC_VALUES = PETSC_ADD_BC_VALUES # aliases INSERT = INSERT_VALUES ADD = ADD_VALUES MAX = MAX_VALUES INSERT_ALL = INSERT_ALL_VALUES ADD_ALL = ADD_ALL_VALUES INSERT_BC = INSERT_BC_VALUES ADD_BC = ADD_BC_VALUES # -------------------------------------------------------------------- class ScatterMode(object): # native SCATTER_FORWARD = PETSC_SCATTER_FORWARD SCATTER_REVERSE = PETSC_SCATTER_REVERSE SCATTER_FORWARD_LOCAL = PETSC_SCATTER_FORWARD_LOCAL SCATTER_REVERSE_LOCAL = PETSC_SCATTER_REVERSE_LOCAL SCATTER_LOCAL = PETSC_SCATTER_LOCAL # aliases FORWARD = SCATTER_FORWARD REVERSE = SCATTER_REVERSE FORWARD_LOCAL = SCATTER_FORWARD_LOCAL REVERSE_LOCAL = SCATTER_REVERSE_LOCAL # -------------------------------------------------------------------- class NormType(object): # native NORM_1 = PETSC_NORM_1 NORM_2 = PETSC_NORM_2 NORM_1_AND_2 = PETSC_NORM_1_AND_2 NORM_FROBENIUS = PETSC_NORM_FROBENIUS NORM_INFINITY = PETSC_NORM_INFINITY NORM_MAX = PETSC_NORM_MAX # aliases N1 = NORM_1 N2 = NORM_2 N12 = NORM_1_AND_2 MAX = NORM_MAX FROBENIUS = NORM_FROBENIUS INFINITY = NORM_INFINITY # extra aliases FRB = FROBENIUS INF = INFINITY # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscsec.pxi0000644000175000001440000000630112711377604020131 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from * nogil: struct _p_PetscSection ctypedef _p_PetscSection* PetscSection int PetscSectionCreate(MPI_Comm,PetscSection*) int PetscSectionClone(PetscSection,PetscSection*) int PetscSectionSetUp(PetscSection) int PetscSectionSetUpBC(PetscSection) int PetscSectionView(PetscSection,PetscViewer) int PetscSectionReset(PetscSection) int PetscSectionDestroy(PetscSection*) int PetscSectionGetNumFields(PetscSection,PetscInt*) int PetscSectionSetNumFields(PetscSection,PetscInt) int PetscSectionGetFieldName(PetscSection,PetscInt,const_char*[]) int PetscSectionSetFieldName(PetscSection,PetscInt,const_char[]) int PetscSectionGetFieldComponents(PetscSection,PetscInt,PetscInt*) int PetscSectionSetFieldComponents(PetscSection,PetscInt,PetscInt) int PetscSectionGetChart(PetscSection,PetscInt*,PetscInt*) int PetscSectionSetChart(PetscSection,PetscInt,PetscInt) int PetscSectionGetDof(PetscSection,PetscInt,PetscInt*) int PetscSectionSetDof(PetscSection,PetscInt,PetscInt) int PetscSectionAddDof(PetscSection,PetscInt,PetscInt) int PetscSectionGetFieldDof(PetscSection,PetscInt,PetscInt,PetscInt*) int PetscSectionSetFieldDof(PetscSection,PetscInt,PetscInt,PetscInt) int PetscSectionAddFieldDof(PetscSection,PetscInt,PetscInt,PetscInt) int PetscSectionGetConstraintDof(PetscSection,PetscInt,PetscInt*) int PetscSectionSetConstraintDof(PetscSection,PetscInt,PetscInt) int PetscSectionAddConstraintDof(PetscSection,PetscInt,PetscInt) int PetscSectionGetFieldConstraintDof(PetscSection,PetscInt,PetscInt,PetscInt*) int PetscSectionSetFieldConstraintDof(PetscSection,PetscInt,PetscInt,PetscInt) int PetscSectionAddFieldConstraintDof(PetscSection,PetscInt,PetscInt,PetscInt) int PetscSectionGetConstraintIndices(PetscSection,PetscInt,const_PetscInt**) int PetscSectionSetConstraintIndices(PetscSection,PetscInt,const_PetscInt*) int PetscSectionGetFieldConstraintIndices(PetscSection,PetscInt,PetscInt,const_PetscInt**) int PetscSectionSetFieldConstraintIndices(PetscSection,PetscInt,PetscInt,const_PetscInt*) int PetscSectionGetMaxDof(PetscSection,PetscInt*) int PetscSectionGetStorageSize(PetscSection,PetscInt*) int PetscSectionGetConstrainedStorageSize(PetscSection,PetscInt*) int PetscSectionGetOffset(PetscSection,PetscInt,PetscInt*) int PetscSectionSetOffset(PetscSection,PetscInt,PetscInt) int PetscSectionGetFieldOffset(PetscSection,PetscInt,PetscInt,PetscInt*) int PetscSectionSetFieldOffset(PetscSection,PetscInt,PetscInt,PetscInt) int PetscSectionGetOffsetRange(PetscSection,PetscInt*,PetscInt*) int PetscSectionCreateGlobalSection(PetscSection,PetscSF,PetscBool,PetscBool,PetscSection*) #int PetscSectionCreateGlobalSectionCensored(PetscSection,PetscSF,PetscBool,PetscInt,const_PetscInt[],PetscSection*) int PetscSectionCreateSubsection(PetscSection,PetscInt,PetscInt[],PetscSection*) int PetscSectionCreateSubmeshSection(PetscSection,IS,PetscSection*) #int PetscSectionGetPointLayout(MPI_Comm,PetscSection,PetscLayout*) #int PetscSectionGetValueLayout(MPI_Comm,PetscSection,PetscLayout*) petsc4py-3.7.0/src/PETSc/petscdef.pxi0000644000175000001440000000447712711377604020131 0ustar dalcinlusers00000000000000cdef extern from * nogil: enum: PETSC_DECIDE enum: PETSC_DEFAULT enum: PETSC_DETERMINE PetscReal PETSC_INFINITY PetscReal PETSC_NINFINITY ctypedef enum PetscBool: PETSC_TRUE, PETSC_YES, PETSC_FALSE, PETSC_NO, ctypedef enum PetscInsertMode "InsertMode": PETSC_NOT_SET_VALUES "NOT_SET_VALUES" PETSC_INSERT_VALUES "INSERT_VALUES" PETSC_ADD_VALUES "ADD_VALUES" PETSC_MAX_VALUES "MAX_VALUES" PETSC_INSERT_ALL_VALUES "INSERT_ALL_VALUES" PETSC_ADD_ALL_VALUES "ADD_ALL_VALUES" PETSC_INSERT_BC_VALUES "INSERT_BC_VALUES" PETSC_ADD_BC_VALUES "ADD_BC_VALUES" ctypedef enum PetscScatterMode "ScatterMode": PETSC_SCATTER_FORWARD "SCATTER_FORWARD" PETSC_SCATTER_REVERSE "SCATTER_REVERSE" PETSC_SCATTER_FORWARD_LOCAL "SCATTER_FORWARD_LOCAL" PETSC_SCATTER_REVERSE_LOCAL "SCATTER_REVERSE_LOCAL" PETSC_SCATTER_LOCAL "SCATTER_LOCAL" ctypedef enum PetscNormType "NormType": PETSC_NORM_1 "NORM_1" PETSC_NORM_2 "NORM_2" PETSC_NORM_1_AND_2 "NORM_1_AND_2" PETSC_NORM_FROBENIUS "NORM_FROBENIUS" PETSC_NORM_INFINITY "NORM_INFINITY" PETSC_NORM_MAX "NORM_MAX" ctypedef enum PetscCopyMode: PETSC_COPY_VALUES PETSC_OWN_POINTER PETSC_USE_POINTER cdef extern from * nogil: enum: PETSC_ERR_MEM enum: PETSC_ERR_SUP enum: PETSC_ERR_ORDER enum: PETSC_ERR_LIB enum: PETSC_ERR_USER enum: PETSC_ERR_SYS cdef inline PetscInsertMode insertmode(object mode) \ except (-1): if mode is None: return PETSC_INSERT_VALUES elif mode is True: return PETSC_ADD_VALUES elif mode is False: return PETSC_INSERT_VALUES else: return mode cdef inline PetscScatterMode scattermode(object mode) \ except (-1): if mode is None: return PETSC_SCATTER_FORWARD if mode is False: return PETSC_SCATTER_FORWARD if mode is True: return PETSC_SCATTER_REVERSE if isinstance(mode, str): if mode == 'forward': return PETSC_SCATTER_FORWARD if mode == 'reverse': return PETSC_SCATTER_REVERSE else: raise ValueError("unknown scatter mode: %s" % mode) return mode petsc4py-3.7.0/src/PETSc/Mat.pyx0000644000175000001440000015744712711377604017103 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class MatType(object): SAME = S_(MATSAME) MAIJ = S_(MATMAIJ) SEQMAIJ = S_(MATSEQMAIJ) MPIMAIJ = S_(MATMPIMAIJ) IS = S_(MATIS) AIJ = S_(MATAIJ) SEQAIJ = S_(MATSEQAIJ) MPIAIJ = S_(MATMPIAIJ) AIJCRL = S_(MATAIJCRL) SEQAIJCRL = S_(MATSEQAIJCRL) MPIAIJCRL = S_(MATMPIAIJCRL) AIJCUSP = S_(MATAIJCUSP) SEQAIJCUSP = S_(MATSEQAIJCUSP) MPIAIJCUSP = S_(MATMPIAIJCUSP) AIJCUSPARSE = S_(MATAIJCUSPARSE) SEQAIJCUSPARSE = S_(MATSEQAIJCUSPARSE) MPIAIJCUSPARSE = S_(MATMPIAIJCUSPARSE) AIJVIENNACL = S_(MATAIJVIENNACL) SEQAIJVIENNACL = S_(MATSEQAIJVIENNACL) MPIAIJVIENNACL = S_(MATMPIAIJVIENNACL) AIJPERM = S_(MATAIJPERM) SEQAIJPERM = S_(MATSEQAIJPERM) MPIAIJPERM = S_(MATMPIAIJPERM) SHELL = S_(MATSHELL) DENSE = S_(MATDENSE) SEQDENSE = S_(MATSEQDENSE) MPIDENSE = S_(MATMPIDENSE) ELEMENTAL = S_(MATELEMENTAL) BAIJ = S_(MATBAIJ) SEQBAIJ = S_(MATSEQBAIJ) MPIBAIJ = S_(MATMPIBAIJ) MPIADJ = S_(MATMPIADJ) SBAIJ = S_(MATSBAIJ) SEQSBAIJ = S_(MATSEQSBAIJ) MPISBAIJ = S_(MATMPISBAIJ) SEQBSTRM = S_(MATSEQBSTRM) MPIBSTRM = S_(MATMPIBSTRM) BSTRM = S_(MATBSTRM) SEQSBSTRM = S_(MATSEQSBSTRM) MPISBSTRM = S_(MATMPISBSTRM) SBSTRM = S_(MATSBSTRM) DAAD = S_(MATDAAD) MFFD = S_(MATMFFD) NORMAL = S_(MATNORMAL) NORMALHERMITIAN = S_(MATNORMALHERMITIAN) LRC = S_(MATLRC) SCATTER = S_(MATSCATTER) BLOCKMAT = S_(MATBLOCKMAT) COMPOSITE = S_(MATCOMPOSITE) FFT = S_(MATFFT) FFTW = S_(MATFFTW) SEQCUFFT = S_(MATSEQCUFFT) TRANSPOSEMAT = S_(MATTRANSPOSEMAT) PYTHON = S_(MATPYTHON) SCHURCOMPLEMENT = S_(MATSCHURCOMPLEMENT) HYPRESTRUCT = S_(MATHYPRESTRUCT) HYPRESSTRUCT = S_(MATHYPRESSTRUCT) SUBMATRIX = S_(MATSUBMATRIX) LOCALREF = S_(MATLOCALREF) NEST = S_(MATNEST) PREALLOCATOR = S_(MATPREALLOCATOR) class MatOption(object): UNUSED_NONZERO_LOCATION_ERR = MAT_UNUSED_NONZERO_LOCATION_ERR ROW_ORIENTED = MAT_ROW_ORIENTED SYMMETRIC = MAT_SYMMETRIC STRUCTURALLY_SYMMETRIC = MAT_STRUCTURALLY_SYMMETRIC NEW_DIAGONALS = MAT_NEW_DIAGONALS IGNORE_OFF_PROC_ENTRIES = MAT_IGNORE_OFF_PROC_ENTRIES USE_HASH_TABLE = MAT_USE_HASH_TABLE KEEP_NONZERO_PATTERN = MAT_KEEP_NONZERO_PATTERN IGNORE_ZERO_ENTRIES = MAT_IGNORE_ZERO_ENTRIES USE_INODES = MAT_USE_INODES HERMITIAN = MAT_HERMITIAN SYMMETRY_ETERNAL = MAT_SYMMETRY_ETERNAL NEW_NONZERO_LOCATION_ERR = MAT_NEW_NONZERO_LOCATION_ERR IGNORE_LOWER_TRIANGULAR = MAT_IGNORE_LOWER_TRIANGULAR ERROR_LOWER_TRIANGULAR = MAT_ERROR_LOWER_TRIANGULAR GETROW_UPPERTRIANGULAR = MAT_GETROW_UPPERTRIANGULAR SPD = MAT_SPD NO_OFF_PROC_ZERO_ROWS = MAT_NO_OFF_PROC_ZERO_ROWS NO_OFF_PROC_ENTRIES = MAT_NO_OFF_PROC_ENTRIES NEW_NONZERO_LOCATIONS = MAT_NEW_NONZERO_LOCATIONS NEW_NONZERO_ALLOCATION_ERR = MAT_NEW_NONZERO_ALLOCATION_ERR SUBSET_OFF_PROC_ENTRIES = MAT_SUBSET_OFF_PROC_ENTRIES class MatAssemblyType(object): # native FINAL_ASSEMBLY = MAT_FINAL_ASSEMBLY FLUSH_ASSEMBLY = MAT_FLUSH_ASSEMBLY # aliases FINAL = FINAL_ASSEMBLY FLUSH = FLUSH_ASSEMBLY class MatInfoType(object): LOCAL = MAT_LOCAL GLOBAL_MAX = MAT_GLOBAL_MAX GLOBAL_SUM = MAT_GLOBAL_SUM class MatStructure(object): # native SAME_NONZERO_PATTERN = MAT_SAME_NONZERO_PATTERN DIFFERENT_NONZERO_PATTERN = MAT_DIFFERENT_NONZERO_PATTERN SUBSET_NONZERO_PATTERN = MAT_SUBSET_NONZERO_PATTERN # aliases SAME = SAME_NZ = SAME_NONZERO_PATTERN SUBSET = SUBSET_NZ = SUBSET_NONZERO_PATTERN DIFFERENT = DIFFERENT_NZ = DIFFERENT_NONZERO_PATTERN class MatOrderingType(object): NATURAL = S_(MATORDERINGNATURAL) ND = S_(MATORDERINGND) OWD = S_(MATORDERING1WD) RCM = S_(MATORDERINGRCM) QMD = S_(MATORDERINGQMD) ROWLENGTH = S_(MATORDERINGROWLENGTH) WBM = S_(MATORDERINGWBM) SPECTRAL = S_(MATORDERINGSPECTRAL) AMD = S_(MATORDERINGAMD) class MatFactorShiftType(object): # native NONE = MAT_SHIFT_NONE NONZERO = MAT_SHIFT_NONZERO POSITIVE_DEFINITE = MAT_SHIFT_POSITIVE_DEFINITE INBLOCKS = MAT_SHIFT_INBLOCKS # aliases NZ = MAT_SHIFT_NONZERO PD = MAT_SHIFT_POSITIVE_DEFINITE class MatSORType(object): FORWARD_SWEEP = SOR_FORWARD_SWEEP BACKWARD_SWEEP = SOR_BACKWARD_SWEEP SYMMETRY_SWEEP = SOR_SYMMETRIC_SWEEP LOCAL_FORWARD_SWEEP = SOR_LOCAL_FORWARD_SWEEP LOCAL_BACKWARD_SWEEP = SOR_LOCAL_BACKWARD_SWEEP LOCAL_SYMMETRIC_SWEEP = SOR_LOCAL_SYMMETRIC_SWEEP ZERO_INITIAL_GUESS = SOR_ZERO_INITIAL_GUESS EISENSTAT = SOR_EISENSTAT APPLY_UPPER = SOR_APPLY_UPPER APPLY_LOWER = SOR_APPLY_LOWER # -------------------------------------------------------------------- cdef class Mat(Object): Type = MatType Option = MatOption AssemblyType = MatAssemblyType InfoType = MatInfoType Structure = MatStructure OrderingType = MatOrderingType FactorShiftType = MatFactorShiftType SORType = MatSORType # def __cinit__(self): self.obj = &self.mat self.mat = NULL # unary operations def __pos__(self): return mat_pos(self) def __neg__(self): return mat_neg(self) # inplace binary operations def __iadd__(self, other): return mat_iadd(self, other) def __isub__(self, other): return mat_isub(self, other) def __imul__(self, other): return mat_imul(self, other) def __idiv__(self, other): return mat_idiv(self, other) def __itruediv__(self, other): return mat_idiv(self, other) # binary operations def __add__(self, other): if isinstance(self, Mat): return mat_add(self, other) else: return mat_radd(other, self) def __sub__(self, other): if isinstance(self, Mat): return mat_sub(self, other) else: return mat_rsub(other, self) def __mul__(self, other): if isinstance(self, Mat): if isinstance(other, Vec): return mat_mul_vec(self, other) else: return mat_mul(self, other) else: return mat_rmul(other, self) def __div__(self, other): if isinstance(self, Mat): return mat_div(self, other) else: return mat_rdiv(other, self) def __truediv__(self, other): if isinstance(self, Mat): return mat_div(self, other) else: return mat_rdiv(other, self) # def __getitem__(self, ij): return mat_getitem(self, ij) def __setitem__(self, ij, v): mat_setitem(self, ij, v) def __call__(self, x, y=None): if y is None: y = self.createVecLeft() self.mult(x, y) return y # def view(self, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( MatView(self.mat, vwr) ) def destroy(self): CHKERR( MatDestroy(&self.mat) ) return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscMat newmat = NULL CHKERR( MatCreate(ccomm, &newmat) ) PetscCLEAR(self.obj); self.mat = newmat return self def setType(self, mat_type): cdef PetscMatType cval = NULL mat_type = str2bytes(mat_type, &cval) CHKERR( MatSetType(self.mat, cval) ) def setSizes(self, size, bsize=None): cdef PetscInt rbs = 0, cbs = 0, m = 0, n = 0, M = 0, N = 0 Mat_Sizes(size, bsize, &rbs, &cbs, &m, &n, &M, &N) CHKERR( MatSetSizes(self.mat, m, n, M, N) ) if rbs != PETSC_DECIDE: if cbs != PETSC_DECIDE: CHKERR( MatSetBlockSizes(self.mat, rbs, cbs) ) else: CHKERR( MatSetBlockSize(self.mat, rbs) ) def setBlockSize(self, bsize): cdef PetscInt bs = asInt(bsize) CHKERR( MatSetBlockSize(self.mat, bs) ) def setBlockSizes(self, row_bsize, col_bsize): cdef PetscInt rbs = asInt(row_bsize) cdef PetscInt cbs = asInt(col_bsize) CHKERR( MatSetBlockSizes(self.mat, rbs, cbs) ) # def createAIJ(self, size, bsize=None, nnz=None, csr=None, comm=None): # create matrix cdef PetscMat newmat = NULL Mat_Create(MATAIJ, comm, size, bsize, &newmat) PetscCLEAR(self.obj); self.mat = newmat # preallocate matrix Mat_AllocAIJ(self.mat, nnz, csr) return self def createBAIJ(self, size, bsize, nnz=None, csr=None, comm=None): # create matrix cdef PetscMat newmat = NULL Mat_Create(MATBAIJ, comm, size, bsize, &newmat) PetscCLEAR(self.obj); self.mat = newmat # preallocate matrix Mat_AllocAIJ(self.mat, nnz, csr) return self def createSBAIJ(self, size, bsize, nnz=None, csr=None, comm=None): # create matrix cdef PetscMat newmat = NULL Mat_Create(MATSBAIJ, comm, size, bsize, &newmat) PetscCLEAR(self.obj); self.mat = newmat # preallocate matrix Mat_AllocAIJ(self.mat, nnz, csr) return self def createAIJCRL(self, size, bsize=None, nnz=None, csr=None, comm=None): # create matrix cdef PetscMat newmat = NULL Mat_Create(MATAIJCRL, comm, size, bsize, &newmat) PetscCLEAR(self.obj); self.mat = newmat # preallocate matrix Mat_AllocAIJ(self.mat, nnz, csr) return self def setPreallocationNNZ(self, nnz): cdef PetscBool done = PETSC_FALSE CHKERR( MatIsPreallocated(self.mat, &done) ) # if done: raise Error(PETSC_ERR_ORDER) Mat_AllocAIJ_NNZ(self.mat, nnz) return self def setPreallocationCSR(self, csr): cdef PetscBool done = PETSC_FALSE CHKERR( MatIsPreallocated(self.mat, &done) ) # if done: raise Error(PETSC_ERR_ORDER) Mat_AllocAIJ_CSR(self.mat, csr) return self def createAIJWithArrays(self, size, csr, bsize=None, comm=None): # communicator cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) # sizes and block sizes cdef PetscInt rbs = 0, cbs = 0, m = 0, n = 0, M = 0, N = 0 Mat_Sizes(size, bsize, &rbs, &cbs, &m, &n, &M, &N) if rbs == PETSC_DECIDE: rbs = 1 if cbs == PETSC_DECIDE: cbs = rbs Sys_Layout(ccomm, rbs, &m, &M) Sys_Layout(ccomm, cbs, &n, &N) # unpack CSR argument cdef object pi, pj, pv, poi, poj, pov try: (pi, pj, pv), (poi, poj, pov) = csr except (TypeError, ValueError): pi, pj, pv = csr poi = poj = pov = None # rows, cols, and values cdef PetscInt ni=0, noi=0, *i=NULL, *oi=NULL cdef PetscInt nj=0, noj=0, *j=NULL, *oj=NULL pi = iarray_i(pi, &ni, &i) # Row pointers (diagonal) pj = iarray_i(pj, &nj, &j) # Column indices (diagonal) if ni != m+1: raise ValueError( "A matrix with %d rows requires a row pointer of length %d (given: %d)" % (toInt(m), toInt(m+1), toInt(ni))) if poi is not None and poj is not None: poi = iarray_i(poi, &noi, &oi) # Row pointers (off-diagonal) poj = iarray_i(poj, &noj, &oj) # Column indices (off-diagonal) cdef PetscInt nv=0, nov=0 cdef PetscScalar *v=NULL, *ov=NULL pv = iarray_s(pv, &nv, &v) # Non-zero values (diagonal) if nj != nv: raise ValueError( "Given %d column indices but %d non-zero values" % (toInt(nj), toInt(nv))) if pov is not None: pov = iarray_s(pov, &nov, &ov) # Non-zero values (off-diagonal) # create matrix cdef PetscMat newmat = NULL if comm_size(ccomm) == 1: CHKERR( MatCreateSeqAIJWithArrays( ccomm, m, n, i, j, v, &newmat) ) csr = (pi, pj, pv) else: if oi != NULL and oj != NULL and ov != NULL: CHKERR( MatCreateMPIAIJWithSplitArrays( ccomm, m, n, M, N, i, j, v, oi, oj, ov, &newmat) ) csr = ((pi, pj, pv), (poi, poj, pov)) else: CHKERR( MatCreateMPIAIJWithArrays( ccomm, m, n, M, N, i, j, v, &newmat) ) csr = None PetscCLEAR(self.obj); self.mat = newmat self.set_attr('__csr__', csr) return self # def createDense(self, size, bsize=None, array=None, comm=None): # create matrix cdef PetscMat newmat = NULL Mat_Create(MATDENSE, comm, size, bsize, &newmat) PetscCLEAR(self.obj); self.mat = newmat # preallocate matrix if array is not None: array = Mat_AllocDense(self.mat, array) self.set_attr('__array__', array) return self def setPreallocationDense(self, array): cdef PetscBool done = PETSC_FALSE CHKERR( MatIsPreallocated(self.mat, &done) ) # if done: raise Error(PETSC_ERR_ORDER) array = Mat_AllocDense(self.mat, array) self.set_attr('__array__', array) return self # def createScatter(self, Scatter scatter not None, comm=None): if comm is None: comm = scatter.getComm() cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscMat newmat = NULL CHKERR( MatCreateScatter(ccomm, scatter.sct, &newmat) ) PetscCLEAR(self.obj); self.mat = newmat return self def createNormal(self, Mat mat not None): cdef PetscMat newmat = NULL CHKERR( MatCreateNormal(mat.mat, &newmat) ) PetscCLEAR(self.obj); self.mat = newmat return self def createTranspose(self, Mat mat not None): cdef PetscMat newmat = NULL CHKERR( MatCreateTranspose(mat.mat, &newmat) ) PetscCLEAR(self.obj); self.mat = newmat return self def createLRC(self, Mat A not None, Mat U not None, Mat V not None): cdef PetscMat newmat = NULL CHKERR( MatCreateLRC(A.mat, U.mat, V.mat, &newmat) ) PetscCLEAR(self.obj); self.mat = newmat return self def createSubMatrix(self, Mat A not None, IS isrow not None, IS iscol=None): if iscol is None: iscol = isrow cdef PetscMat newmat = NULL CHKERR( MatCreateSubMatrix(A.mat, isrow.iset, iscol.iset, &newmat) ) PetscCLEAR(self.obj); self.mat = newmat return self def createNest(self, mats, isrows=None, iscols=None, comm=None): cdef object mat mats = [list(mat) for mat in mats] if isrows: isrows = list(isrows) assert len(isrows) == len(mats) else: isrows = None if iscols: iscols = list(iscols) assert len(iscols) == len(mats[0]) else: iscols = None cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef Py_ssize_t i, mr = len(mats) cdef Py_ssize_t j, mc = len(mats[0]) cdef PetscInt nr = mr cdef PetscInt nc = mc cdef PetscMat *cmats = NULL cdef PetscIS *cisrows = NULL cdef PetscIS *ciscols = NULL cdef object tmp1, tmp2, tmp3 tmp1 = oarray_p(empty_p(nr*nc), NULL, &cmats) for i from 0 <= i < mr: for j from 0 <= j < mc: mat = mats[i][j] cmats[i*mc+j] = (mat).mat if mat is not None else NULL if isrows is not None: tmp2 = oarray_p(empty_p(nr), NULL, &cisrows) for i from 0 <= i < mr: cisrows[i] = (isrows[i]).iset if iscols is not None: tmp3 = oarray_p(empty_p(nc), NULL, &ciscols) for j from 0 <= j < mc: ciscols[j] = (iscols[j]).iset cdef PetscMat newmat = NULL CHKERR( MatCreateNest(ccomm, nr, cisrows, nc, ciscols, cmats, &newmat) ) PetscCLEAR(self.obj); self.mat = newmat return self ##def createIS(self, size, LGMap lgmap not None, comm=None): ## # communicator and sizes ## if comm is None: comm = lgmap.getComm() ## cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) ## cdef PetscInt rbs = 0, cbs = 0, m = 0, n = 0, M = 0, N = 0 ## Mat_Sizes(size, None, &rbs, &cbs, &m, &n, &M, &N) ## Sys_Layout(ccomm, rbs, &m, &M) ## Sys_Layout(ccomm, cbs, &n, &N) ## # create matrix ## cdef PetscMat newmat = NULL ## CHKERR( MatCreateIS(ccomm, m, n, M, N, lgmap.lgm, &newmat) ) ## PetscCLEAR(self.obj); self.mat = newmat ## return self def createPython(self, size, context=None, comm=None): # communicator and sizes cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscInt rbs = 0, cbs = 0, m = 0, n = 0, M = 0, N = 0 Mat_Sizes(size, None, &rbs, &cbs, &m, &n, &M, &N) Sys_Layout(ccomm, rbs, &m, &M) Sys_Layout(ccomm, cbs, &n, &N) # create matrix cdef PetscMat newmat = NULL CHKERR( MatCreate(ccomm, &newmat) ) PetscCLEAR(self.obj); self.mat = newmat CHKERR( MatSetSizes(self.mat, m, n, M, N) ) CHKERR( MatSetType(self.mat, MATPYTHON) ) CHKERR( MatPythonSetContext(self.mat, context) ) return self def setPythonContext(self, context): CHKERR( MatPythonSetContext(self.mat, context) ) def getPythonContext(self): cdef void *context = NULL CHKERR( MatPythonGetContext(self.mat, &context) ) if context == NULL: return None else: return context def setPythonType(self, py_type): cdef const_char *cval = NULL py_type = str2bytes(py_type, &cval) CHKERR( MatPythonSetType(self.mat, cval) ) # def setOptionsPrefix(self, prefix): cdef const_char *cval = NULL prefix = str2bytes(prefix, &cval) CHKERR( MatSetOptionsPrefix(self.mat, cval) ) def getOptionsPrefix(self): cdef const_char *cval = NULL CHKERR( MatGetOptionsPrefix(self.mat, &cval) ) return bytes2str(cval) def setFromOptions(self): CHKERR( MatSetFromOptions(self.mat) ) def setUp(self): CHKERR( MatSetUp(self.mat) ) return self def setOption(self, option, flag): CHKERR( MatSetOption(self.mat, option, flag) ) def getType(self): cdef PetscMatType cval = NULL CHKERR( MatGetType(self.mat, &cval) ) return bytes2str(cval) def getSize(self): cdef PetscInt M = 0, N = 0 CHKERR( MatGetSize(self.mat, &M, &N) ) return (toInt(M), toInt(N)) def getLocalSize(self): cdef PetscInt m = 0, n = 0 CHKERR( MatGetLocalSize(self.mat, &m, &n) ) return (toInt(m), toInt(n)) def getSizes(self): cdef PetscInt m = 0, n = 0 cdef PetscInt M = 0, N = 0 CHKERR( MatGetLocalSize(self.mat, &m, &n) ) CHKERR( MatGetSize(self.mat, &M, &N) ) return ((toInt(m), toInt(M)), (toInt(n), toInt(N))) def getBlockSize(self): cdef PetscInt bs = 0 CHKERR( MatGetBlockSize(self.mat, &bs) ) return toInt(bs) def getBlockSizes(self): cdef PetscInt rbs = 0, cbs = 0 CHKERR( MatGetBlockSizes(self.mat, &rbs, &cbs) ) return (toInt(rbs), toInt(cbs)) def getOwnershipRange(self): cdef PetscInt ival1 = 0, ival2 = 0 CHKERR( MatGetOwnershipRange(self.mat, &ival1, &ival2) ) return (toInt(ival1), toInt(ival2)) def getOwnershipRanges(self): cdef const_PetscInt *rowrng = NULL CHKERR( MatGetOwnershipRanges(self.mat, &rowrng) ) cdef MPI_Comm comm = MPI_COMM_NULL CHKERR( PetscObjectGetComm(self.mat, &comm) ) cdef int size = -1 CHKERR( MPI_Comm_size(comm, &size) ) return array_i(size+1, rowrng) def getOwnershipRangeColumn(self): cdef PetscInt ival1 = 0, ival2 = 0 CHKERR( MatGetOwnershipRangeColumn(self.mat, &ival1, &ival2) ) return (toInt(ival1), toInt(ival2)) def getOwnershipRangesColumn(self): cdef const_PetscInt *colrng = NULL CHKERR( MatGetOwnershipRangesColumn(self.mat, &colrng) ) cdef MPI_Comm comm = MPI_COMM_NULL CHKERR( PetscObjectGetComm(self.mat, &comm) ) cdef int size = -1 CHKERR( MPI_Comm_size(comm, &size) ) return array_i(size+1, colrng) def getOwnershipIS(self): cdef IS rows = IS() cdef IS cols = IS() CHKERR( MatGetOwnershipIS(self.mat, &rows.iset, &cols.iset) ) return (rows, cols) def getInfo(self, info=None): cdef PetscMatInfoType itype = infotype(info) cdef PetscMatInfo cinfo CHKERR( MatGetInfo(self.mat, itype, &cinfo) ) return cinfo def duplicate(self, copy=False): cdef PetscMatDuplicateOption flag = MAT_DO_NOT_COPY_VALUES if copy: flag = MAT_COPY_VALUES cdef Mat mat = type(self)() CHKERR( MatDuplicate(self.mat, flag, &mat.mat) ) return mat def copy(self, Mat result=None, structure=None): cdef PetscMatDuplicateOption copy = MAT_COPY_VALUES cdef PetscMatStructure mstr = matstructure(structure) if result is None: result = type(self)() if result.mat == NULL: CHKERR( MatDuplicate(self.mat, copy, &result.mat) ) else: CHKERR( MatCopy(self.mat, result.mat, mstr) ) return result def load(self, Viewer viewer not None): cdef MPI_Comm comm = MPI_COMM_NULL cdef PetscObject obj = (viewer.vwr) if self.mat == NULL: CHKERR( PetscObjectGetComm(obj, &comm) ) CHKERR( MatCreate(comm, &self.mat) ) CHKERR( MatLoad(self.mat, viewer.vwr) ) return self def convert(self, mat_type=None, Mat out=None): cdef PetscMatType mtype = MATSAME cdef PetscMatReuse reuse = MAT_INITIAL_MATRIX mat_type = str2bytes(mat_type, &mtype) if mtype == NULL: mtype = MATSAME if out is None: out = self if out.mat != NULL: reuse = MAT_REUSE_MATRIX CHKERR( MatConvert(self.mat, mtype, reuse, &out.mat) ) return out def transpose(self, Mat out=None): cdef PetscMatReuse reuse = MAT_INITIAL_MATRIX if out is None: out = self if out.mat != NULL: reuse = MAT_REUSE_MATRIX CHKERR( MatTranspose(self.mat, reuse, &out.mat) ) return out def realPart(self, Mat out=None): if out is None: out = self elif out.mat == NULL: CHKERR( MatDuplicate(self.mat, MAT_COPY_VALUES, &out.mat) ) CHKERR( MatRealPart(out.mat) ) return out def imagPart(self, Mat out=None): if out is None: out = self elif out.mat == NULL: CHKERR( MatDuplicate(self.mat, MAT_COPY_VALUES, &out.mat) ) CHKERR( MatImaginaryPart(out.mat) ) return out def conjugate(self, Mat out=None): if out is None: out = self elif out.mat == NULL: CHKERR( MatDuplicate(self.mat, MAT_COPY_VALUES, &out.mat) ) CHKERR( MatConjugate(out.mat) ) return out def permute(self, IS row not None, IS col not None): cdef Mat mat = Mat() CHKERR( MatPermute(self.mat, row.iset, col.iset, &mat.mat) ) return mat def equal(self, Mat mat not None): cdef PetscBool flag = PETSC_FALSE CHKERR( MatEqual(self.mat, mat.mat, &flag) ) return mat def isTranspose(self, Mat mat=None, tol=0): if mat is None: mat = self cdef PetscReal rval = asReal(tol) cdef PetscBool flag = PETSC_FALSE CHKERR( MatIsTranspose(self.mat, mat.mat, rval, &flag) ) return flag def isSymmetric(self, tol=0): cdef PetscReal rval = asReal(tol) cdef PetscBool flag = PETSC_FALSE CHKERR( MatIsSymmetric(self.mat, rval, &flag) ) return flag def isSymmetricKnown(self): cdef PetscBool flag1 = PETSC_FALSE cdef PetscBool flag2 = PETSC_FALSE CHKERR( MatIsSymmetricKnown(self.mat, &flag1, &flag2) ) return (flag1, flag2) def isHermitian(self, tol=0): cdef PetscReal rval = asReal(tol) cdef PetscBool bval = PETSC_FALSE CHKERR( MatIsHermitian(self.mat, rval, &bval) ) return bval def isHermitianKnown(self): cdef PetscBool bval1 = PETSC_FALSE cdef PetscBool bval2 = PETSC_FALSE CHKERR( MatIsHermitianKnown(self.mat, &bval1, &bval2) ) return (bval1, bval2) def isStructurallySymmetric(self): cdef PetscBool bval = PETSC_FALSE CHKERR( MatIsStructurallySymmetric(self.mat, &bval) ) return bval def zeroEntries(self): CHKERR( MatZeroEntries(self.mat) ) def getValue(self, row, col): cdef PetscInt ival1 = asInt(row) cdef PetscInt ival2 = asInt(col) cdef PetscScalar sval = 0 CHKERR( MatGetValues(self.mat, 1, &ival1, 1, &ival2, &sval) ) return toScalar(sval) def getValues(self, rows, cols, values=None): return matgetvalues(self.mat, rows, cols, values) def getValuesCSR(self): # row ownership cdef PetscInt rstart=0, rend=0, nrows=0 CHKERR( MatGetOwnershipRange(self.mat, &rstart, &rend) ) nrows = rend - rstart # first pass: row pointer array cdef PetscInt *AI = NULL cdef ndarray ai = oarray_i(empty_i(nrows+1), NULL, &AI) cdef PetscInt irow=0, ncols=0 AI[0] = 0 for irow from 0 <= irow < nrows: CHKERR( MatGetRow(self.mat, irow+rstart, &ncols, NULL, NULL) ) AI[irow+1] = AI[irow] + ncols CHKERR( MatRestoreRow(self.mat, irow+rstart, &ncols, NULL, NULL) ) # second pass: column indices and values cdef PetscInt *AJ = NULL cdef ndarray aj = oarray_i(empty_i(AI[nrows]), NULL, &AJ) cdef PetscScalar *AV = NULL cdef ndarray av = oarray_s(empty_s(AI[nrows]), NULL, &AV) cdef const_PetscInt *cols = NULL cdef const_PetscScalar *vals = NULL for irow from 0 <= irow < nrows: CHKERR( MatGetRow(self.mat, irow+rstart, &ncols, &cols, &vals) ) CHKERR( PetscMemcpy(AJ+AI[irow], cols, ncols*sizeof(PetscInt)) ) CHKERR( PetscMemcpy(AV+AI[irow], vals, ncols*sizeof(PetscScalar)) ) CHKERR( MatRestoreRow(self.mat, irow+rstart, &ncols, &cols, &vals) ) # return (ai, aj, av) def getRow(self, row): cdef PetscInt irow = asInt(row) cdef PetscInt ncols = 0 cdef const_PetscInt *icols=NULL cdef const_PetscScalar *svals=NULL CHKERR( MatGetRow(self.mat, irow, &ncols, &icols, &svals) ) cdef object cols = array_i(ncols, icols) cdef object vals = array_s(ncols, svals) CHKERR( MatRestoreRow(self.mat, irow, &ncols, &icols, &svals) ) return (cols, vals) def getRowIJ(self, symmetric=False, compressed=False): cdef PetscInt shift=0 cdef PetscBool symm=symmetric cdef PetscBool bcmp=compressed cdef PetscInt n=0 cdef const_PetscInt *ia=NULL cdef const_PetscInt *ja=NULL cdef PetscBool done=PETSC_FALSE CHKERR( MatGetRowIJ(self.mat, shift, symm, bcmp, &n, &ia, &ja, &done) ) cdef object ai=None, aj=None if done != PETSC_FALSE: ai = array_i( n+1, ia) if done != PETSC_FALSE: aj = array_i(ia[n], ja) CHKERR( MatRestoreRowIJ(self.mat, shift, symm, bcmp, &n, &ia, &ja, &done) ) return (ai, aj) def getColumnIJ(self, symmetric=False, compressed=False): cdef PetscInt shift=0 cdef PetscBool symm=symmetric, bcmp=compressed cdef PetscInt n=0 cdef const_PetscInt *ia=NULL cdef const_PetscInt *ja=NULL cdef PetscBool done=PETSC_FALSE CHKERR( MatGetColumnIJ(self.mat, shift, symm, bcmp, &n, &ia, &ja, &done) ) cdef object ai=None, aj=None if done != PETSC_FALSE: ai = array_i( n+1, ia) if done != PETSC_FALSE: aj = array_i(ia[n], ja) CHKERR( MatRestoreColumnIJ(self.mat, shift, symm, bcmp, &n, &ia, &ja, &done) ) return (ai, aj) def setValue(self, row, col, value, addv=None): cdef PetscInt ival1 = asInt(row) cdef PetscInt ival2 = asInt(col) cdef PetscScalar sval = asScalar(value) cdef PetscInsertMode caddv = insertmode(addv) CHKERR( MatSetValues(self.mat, 1, &ival1, 1, &ival2, &sval, caddv) ) def setValues(self, rows, cols, values, addv=None): matsetvalues(self.mat, rows, cols, values, addv, 0, 0) def setValuesRCV(self, R, C, V, addv=None): matsetvalues_rcv(self.mat, R, C, V, addv, 0, 0) def setValuesIJV(self, I, J, V, addv=None, rowmap=None): matsetvalues_ijv(self.mat, I, J, V, addv, rowmap, 0, 0) def setValuesCSR(self, I, J, V, addv=None): matsetvalues_csr(self.mat, I, J, V, addv, 0, 0) def setValuesBlocked(self, rows, cols, values, addv=None): matsetvalues(self.mat, rows, cols, values, addv, 1, 0) def setValuesBlockedRCV(self, R, C, V, addv=None): matsetvalues_rcv(self.mat, R, C, V, addv, 1, 0) def setValuesBlockedIJV(self, I, J, V, addv=None, rowmap=None): matsetvalues_ijv(self.mat, I, J, V, addv, rowmap, 1, 0) def setValuesBlockedCSR(self, I, J, V, addv=None): matsetvalues_csr(self.mat, I, J, V, addv, 1, 0) def setLGMap(self, LGMap rmap not None, LGMap cmap=None): if cmap is None: cmap = rmap CHKERR( MatSetLocalToGlobalMapping(self.mat, rmap.lgm, cmap.lgm) ) def setValueLocal(self, row, col, value, addv=None): cdef PetscInt ival1 = asInt(row) cdef PetscInt ival2 = asInt(col) cdef PetscScalar sval = asScalar(value) cdef PetscInsertMode caddv = insertmode(addv) CHKERR( MatSetValuesLocal( self.mat, 1, &ival1, 1, &ival2, &sval, caddv) ) def setValuesLocal(self, rows, cols, values, addv=None): matsetvalues(self.mat, rows, cols, values, addv, 0, 1) def setValuesLocalRCV(self, R, C, V, addv=None): matsetvalues_rcv(self.mat, R, C, V, addv, 0, 1) def setValuesLocalIJV(self, I, J, V, addv=None, rowmap=None): matsetvalues_ijv(self.mat, I, J, V, addv, rowmap, 0, 1) def setValuesLocalCSR(self, I, J, V, addv=None): matsetvalues_csr(self.mat, I, J, V, addv, 0, 1) def setValuesBlockedLocal(self, rows, cols, values, addv=None): matsetvalues(self.mat, rows, cols, values, addv, 1, 1) def setValuesBlockedLocalRCV(self, R, C, V, addv=None): matsetvalues_rcv(self.mat, R, C, V, addv, 1, 1) def setValuesBlockedLocalIJV(self, I, J, V, addv=None, rowmap=None): matsetvalues_ijv(self.mat, I, J, V, addv, rowmap, 1, 1) def setValuesBlockedLocalCSR(self, I, J, V, addv=None): matsetvalues_csr(self.mat, I, J, V, addv, 1, 1) # Stencil = _Mat_Stencil def setStencil(self, dims, starts=None, dof=1): cdef PetscInt ndim, ndof cdef PetscInt cdims[3], cstarts[3] cdims[0] = cdims[1] = cdims[2] = 1 cstarts[0] = cstarts[1] = cstarts[2] = 0 ndim = asDims(dims, &cdims[0], &cdims[1], &cdims[2]) ndof = asInt(dof) if starts is not None: asDims(dims, &cstarts[0], &cstarts[1], &cstarts[2]) CHKERR( MatSetStencil(self.mat, ndim, cdims, cstarts, ndof) ) def setValueStencil(self, row, col, value, addv=None): cdef _Mat_Stencil r = row, c = col cdef PetscInsertMode im = insertmode(addv) matsetvaluestencil(self.mat, r, c, value, im, 0) def setValueBlockedStencil(self, row, col, value, addv=None): cdef _Mat_Stencil r = row, c = col cdef PetscInsertMode im = insertmode(addv) matsetvaluestencil(self.mat, r, c, value, im, 1) # def zeroRows(self, rows, diag=1, Vec x=None, Vec b=None): cdef PetscInt ni=0, *i=NULL cdef PetscScalar sval = asScalar(diag) cdef PetscVec xvec=NULL, bvec=NULL if x is not None: xvec = x.vec if b is not None: bvec = b.vec if isinstance(rows, IS): CHKERR( MatZeroRowsIS(self.mat, (rows).iset, sval, xvec, bvec) ) else: rows = iarray_i(rows, &ni, &i) CHKERR( MatZeroRows(self.mat, ni, i, sval, xvec, bvec) ) def zeroRowsLocal(self, rows, diag=1, Vec x=None, Vec b=None): cdef PetscInt ni=0, *i=NULL cdef PetscScalar sval = asScalar(diag) cdef PetscVec xvec=NULL, bvec=NULL if x is not None: xvec = x.vec if b is not None: bvec = b.vec if isinstance(rows, IS): CHKERR( MatZeroRowsLocalIS(self.mat, (rows).iset, sval, xvec, bvec) ) else: rows = iarray_i(rows, &ni, &i) CHKERR( MatZeroRowsLocal(self.mat, ni, i, sval, xvec, bvec) ) def zeroRowsColumns(self, rows, diag=1, Vec x=None, Vec b=None): cdef PetscInt ni=0, *i=NULL cdef PetscScalar sval = asScalar(diag) cdef PetscVec xvec=NULL, bvec=NULL if x is not None: xvec = x.vec if b is not None: bvec = b.vec if isinstance(rows, IS): CHKERR( MatZeroRowsColumnsIS(self.mat, (rows).iset, sval, xvec, bvec) ) else: rows = iarray_i(rows, &ni, &i) CHKERR( MatZeroRowsColumns(self.mat, ni, i, sval, xvec, bvec) ) def storeValues(self): CHKERR( MatStoreValues(self.mat) ) def retrieveValues(self): CHKERR( MatRetrieveValues(self.mat) ) def assemblyBegin(self, assembly=None): cdef PetscMatAssemblyType flag = assemblytype(assembly) CHKERR( MatAssemblyBegin(self.mat, flag) ) def assemblyEnd(self, assembly=None): cdef PetscMatAssemblyType flag = assemblytype(assembly) CHKERR( MatAssemblyEnd(self.mat, flag) ) def assemble(self, assembly=None): cdef PetscMatAssemblyType flag = assemblytype(assembly) CHKERR( MatAssemblyBegin(self.mat, flag) ) CHKERR( MatAssemblyEnd(self.mat, flag) ) def isAssembled(self): cdef PetscBool assembled = PETSC_FALSE CHKERR( MatAssembled(self.mat, &assembled) ) return assembled # def createVecs(self, side=None): cdef Vec vecr, vecl if side is None: vecr = Vec(); vecl = Vec(); CHKERR( MatCreateVecs(self.mat, &vecr.vec, &vecl.vec) ) return (vecr, vecl) elif side in ('r', 'R', 'right', 'Right', 'RIGHT'): vecr = Vec() CHKERR( MatCreateVecs(self.mat, &vecr.vec, NULL) ) return vecr elif side in ('l', 'L', 'left', 'Left', 'LEFT'): vecl = Vec() CHKERR( MatCreateVecs(self.mat, NULL, &vecl.vec) ) return vecl else: raise ValueError("side '%r' not understood" % side) def createVecRight(self): cdef Vec vecr = Vec() CHKERR( MatCreateVecs(self.mat, &vecr.vec, NULL) ) return vecr def createVecLeft(self): cdef Vec vecl = Vec() CHKERR( MatCreateVecs(self.mat, NULL, &vecl.vec) ) return vecl getVecs = createVecs getVecRight = createVecRight getVecLeft = createVecLeft # def getColumnVector(self, column, Vec result=None): cdef PetscInt ival = asInt(column) if result is None: result = Vec() if result.vec == NULL: CHKERR( MatCreateVecs(self.mat, NULL, &result.vec) ) CHKERR( MatGetColumnVector(self.mat, result.vec, ival) ) return result def getRedundantMatrix(self, nsubcomm, subcomm=None, Mat out=None): cdef PetscInt _nsubcomm = asInt(nsubcomm) cdef MPI_Comm _subcomm = MPI_COMM_NULL if subcomm: _subcomm = def_Comm(subcomm, PETSC_COMM_DEFAULT) cdef PetscMatReuse reuse = MAT_INITIAL_MATRIX if out is None: out = Mat() if out.mat != NULL: reuse = MAT_REUSE_MATRIX CHKERR( MatCreateRedundantMatrix(self.mat, _nsubcomm, _subcomm, reuse, &out.mat)) return out def getDiagonal(self, Vec result=None): if result is None: result = Vec() if result.vec == NULL: CHKERR( MatCreateVecs(self.mat, NULL, &result.vec) ) CHKERR( MatGetDiagonal(self.mat, result.vec) ) return result def getRowSum(self, Vec result=None): if result is None: result = Vec() if result.vec == NULL: CHKERR( MatCreateVecs(self.mat, NULL, &result.vec) ) CHKERR( MatGetRowSum(self.mat, result.vec) ) return result def setDiagonal(self, Vec diag not None, addv=None): cdef PetscInsertMode caddv = insertmode(addv) CHKERR( MatDiagonalSet(self.mat, diag.vec, caddv) ) def diagonalScale(self, Vec L=None, Vec R=None): cdef PetscVec vecl=NULL, vecr=NULL if L is not None: vecl = L.vec if R is not None: vecr = R.vec CHKERR( MatDiagonalScale(self.mat, vecl, vecr) ) def invertBlockDiagonal(self): cdef PetscInt bs = 0, m = 0 cdef const_PetscScalar *cibdiag = NULL CHKERR( MatGetBlockSize(self.mat, &bs) ) CHKERR( MatGetLocalSize(self.mat, &m, NULL) ) CHKERR( MatInvertBlockDiagonal(self.mat, &cibdiag) ) cdef ndarray ibdiag = array_s(m*bs, cibdiag) ibdiag.shape = (toInt(m//bs), toInt(bs), toInt(bs)) return ibdiag.transpose(0, 2, 1) # null space def setNullSpace(self, NullSpace nsp not None): CHKERR( MatSetNullSpace(self.mat, nsp.nsp) ) def getNullSpace(self): cdef NullSpace nsp = NullSpace() CHKERR( MatGetNullSpace(self.mat, &nsp.nsp) ) PetscINCREF(nsp.obj) return nsp def setNearNullSpace(self, NullSpace nsp not None): CHKERR( MatSetNearNullSpace(self.mat, nsp.nsp) ) def getNearNullSpace(self): cdef NullSpace nsp = NullSpace() CHKERR( MatGetNearNullSpace(self.mat, &nsp.nsp) ) PetscINCREF(nsp.obj) return nsp # matrix-vector product def mult(self, Vec x not None, Vec y not None): CHKERR( MatMult(self.mat, x.vec, y.vec) ) def multAdd(self, Vec x not None, Vec v not None, Vec y not None): CHKERR( MatMultAdd(self.mat, x.vec, v.vec, y.vec) ) def multTranspose(self, Vec x not None, Vec y not None): CHKERR( MatMultTranspose(self.mat, x.vec, y.vec) ) def multTransposeAdd(self, Vec x not None, Vec v not None, Vec y not None): CHKERR( MatMultTransposeAdd(self.mat, x.vec, v.vec, y.vec) ) def multHermitian(self, Vec x not None, Vec y not None): CHKERR( MatMultHermitian(self.mat, x.vec, y.vec) ) def multHermitianAdd(self, Vec x not None, Vec v not None, Vec y not None): CHKERR( MatMultHermitianAdd(self.mat, x.vec, v.vec, y.vec) ) # SOR def SOR(self, Vec b not None, Vec x not None, omega=1.0, sortype=None, shift=0.0, its=1, lits=1): cdef PetscReal comega = asReal(omega) cdef PetscMatSORType csortype = SOR_LOCAL_SYMMETRIC_SWEEP if sortype is not None: csortype = asInt(sortype) cdef PetscInt cshift = asInt(shift) cdef PetscInt cits = asInt(its) cdef PetscInt clits = asInt(lits) CHKERR( MatSOR(self.mat, b.vec, comega, csortype, cshift, cits, clits, x.vec) ) # def getDiagonalBlock(self): cdef Mat submat = Mat() CHKERR( MatGetDiagonalBlock(self.mat, &submat.mat) ) PetscINCREF(submat.obj) return submat def increaseOverlap(self, IS iset not None, overlap=1): cdef PetscInt ival = asInt(overlap) CHKERR( MatIncreaseOverlap(self.mat, 1, &iset.iset, ival) ) def getSubMatrix(self, IS isrow not None, IS iscol=None, Mat submat=None): cdef PetscMatReuse reuse = MAT_INITIAL_MATRIX cdef PetscIS ciscol = NULL if iscol is not None: ciscol = iscol.iset if submat is None: submat = Mat() if submat.mat != NULL: reuse = MAT_REUSE_MATRIX CHKERR( MatGetSubMatrix(self.mat, isrow.iset, ciscol, reuse, &submat.mat) ) return submat def getSubMatrices(self, isrows not None, iscols=None, submats=None): if iscols is None: iscols = isrows isrows = [isrows] if isinstance(isrows, IS) else list(isrows) iscols = [iscols] if isinstance(iscols, IS) else list(iscols) assert len(isrows) == len(iscols) cdef Py_ssize_t i, n = len(isrows) cdef PetscMatReuse reuse = MAT_INITIAL_MATRIX cdef PetscIS *cisrows = NULL cdef PetscIS *ciscols = NULL cdef PetscMat *cmats = NULL cdef object tmp1, tmp2 cdef Mat mat tmp1 = oarray_p(empty_p(n), NULL, &cisrows) for i from 0 <= i < n: cisrows[i] = (isrows[i]).iset tmp2 = oarray_p(empty_p(n), NULL, &ciscols) for i from 0 <= i < n: ciscols[i] = (iscols[i]).iset if submats is not None: reuse = MAT_REUSE_MATRIX submats = list(submats) assert len(submats) == len(isrows) CHKERR( PetscMalloc((n+1)*sizeof(PetscMat), &cmats) ) for i from 0 <= i < n: cmats[i] = (submats[i]).mat CHKERR( MatGetSubMatrices(self.mat, n, cisrows, ciscols, reuse, &cmats) ) for i from 0 <= i < n: PetscINCREF(&cmats[i]) if reuse == MAT_INITIAL_MATRIX: submats = [None] * n for i from 0 <= i < n: submats[i] = mat = Mat() mat.mat = cmats[i] CHKERR( MatDestroyMatrices(n, &cmats) ) return submats # def getLocalSubMatrix(self, IS isrow not None, IS iscol not None, Mat submat=None): if submat is None: submat = Mat() else: CHKERR( MatDestroy(&submat.mat) ) CHKERR( MatGetLocalSubMatrix(self.mat, isrow.iset, iscol.iset, &submat.mat) ) return submat def restoreLocalSubMatrix(self, IS isrow not None, IS iscol not None, Mat submat not None): CHKERR( MatRestoreLocalSubMatrix(self.mat, isrow.iset, iscol.iset, &submat.mat) ) # def norm(self, norm_type=None): cdef PetscNormType norm_1_2 = PETSC_NORM_1_AND_2 cdef PetscNormType ntype = PETSC_NORM_FROBENIUS if norm_type is not None: ntype = norm_type cdef PetscReal rval[2] CHKERR( MatNorm(self.mat, ntype, rval) ) if ntype != norm_1_2: return toReal(rval[0]) else: return (toReal(rval[0]), toReal(rval[1])) def scale(self, alpha): cdef PetscScalar sval = asScalar(alpha) CHKERR( MatScale(self.mat, sval) ) def shift(self, alpha): cdef PetscScalar sval = asScalar(alpha) CHKERR( MatShift(self.mat, sval) ) def chop(self, tol): cdef PetscReal rval = asReal(tol) CHKERR( MatChop(self.mat, rval) ) def axpy(self, alpha, Mat X not None, structure=None): cdef PetscScalar sval = asScalar(alpha) cdef PetscMatStructure flag = matstructure(structure) CHKERR( MatAXPY(self.mat, sval, X.mat, flag) ) def aypx(self, alpha, Mat X not None, structure=None): cdef PetscScalar sval = asScalar(alpha) cdef PetscMatStructure flag = matstructure(structure) CHKERR( MatAYPX(self.mat, sval, X.mat, flag) ) # matrix-matrix product def matMultSymbolic(self, Mat mat not None, fill=None): cdef Mat result = Mat() cdef PetscReal rval = 2 if fill is not None: rval = asReal(fill) CHKERR( MatMatMultSymbolic(self.mat, mat.mat, rval, &result.mat) ) return result def matMultNumeric(self, Mat mat not None, Mat result=None): if result is None: result = Mat() if result.mat == NULL: CHKERR( MatMatMultSymbolic(self.mat, mat.mat, 2.0, &result.mat) ) CHKERR( MatMatMultNumeric(self.mat, mat.mat, result.mat) ) return result def matMult(self, Mat mat not None, Mat result=None, fill=None): cdef PetscMatReuse reuse = MAT_INITIAL_MATRIX cdef PetscReal rval = 2 if result is None: result = Mat() elif result.mat != NULL: reuse = MAT_REUSE_MATRIX if fill is not None: rval = asReal(fill) CHKERR( MatMatMult(self.mat, mat.mat, reuse, rval, &result.mat) ) return result def matTransposeMult(self, Mat mat not None, Mat result=None, fill=None): cdef PetscMatReuse reuse = MAT_INITIAL_MATRIX cdef PetscReal rval = 2 if result is None: result = Mat() elif result.mat != NULL: reuse = MAT_REUSE_MATRIX if fill is not None: rval = asReal(fill) CHKERR( MatMatTransposeMult(self.mat, mat.mat, reuse, rval, &result.mat) ) return result def transposeMatMult(self, Mat mat not None, Mat result=None, fill=None): cdef PetscMatReuse reuse = MAT_INITIAL_MATRIX cdef PetscReal rval = 2 if result is None: result = Mat() elif result.mat != NULL: reuse = MAT_REUSE_MATRIX if fill is not None: rval = asReal(fill) CHKERR( MatTransposeMatMult(self.mat, mat.mat, reuse, rval, &result.mat) ) return result # XXX factorization def getOrdering(self, ord_type): cdef PetscMatOrderingType cval = NULL ord_type = str2bytes(ord_type, &cval) cdef IS rp = IS(), cp = IS() CHKERR( MatGetOrdering(self.mat, cval, &rp.iset, &cp.iset) ) return (rp, cp) def reorderForNonzeroDiagonal(self, IS isrow not None, IS iscol not None, atol=0): cdef PetscReal rval = asReal(atol) cdef PetscIS rp = isrow.iset, cp = iscol.iset CHKERR( MatReorderForNonzeroDiagonal(self.mat, rval, rp, cp) ) def factorLU(self, IS isrow not None, IS iscol not None, options=None): cdef PetscMatFactorInfo info matfactorinfo(PETSC_FALSE, PETSC_FALSE, options, &info) CHKERR( MatLUFactor(self.mat, isrow.iset, iscol.iset, &info) ) def factorSymbolicLU(self, Mat mat not None, IS isrow not None, IS iscol not None, options=None): self; mat; isrow; iscol; options; # unused raise NotImplementedError def factorNumericLU(self, Mat mat not None, options=None): self; mat; options; # unused raise NotImplementedError def factorILU(self, IS isrow not None, IS iscol not None, options=None): cdef PetscMatFactorInfo info matfactorinfo(PETSC_TRUE, PETSC_FALSE, options, &info) CHKERR( MatILUFactor(self.mat, isrow.iset, iscol.iset, &info) ) def factorSymbolicILU(self, IS isrow not None, IS iscol not None, options=None): self; isrow; iscol; options; # unused raise NotImplementedError def factorCholesky(self, IS isperm not None, options=None): cdef PetscMatFactorInfo info matfactorinfo(PETSC_FALSE, PETSC_TRUE, options, &info) CHKERR( MatCholeskyFactor(self.mat, isperm.iset, &info) ) def factorSymbolicCholesky(self, IS isperm not None, options=None): self; isperm; options; # unused raise NotImplementedError def factorNumericCholesky(self, Mat mat not None, options=None): self; mat; options; # unused raise NotImplementedError def factorICC(self, IS isperm not None, options=None): cdef PetscMatFactorInfo info matfactorinfo(PETSC_TRUE, PETSC_TRUE, options, &info) CHKERR( MatICCFactor(self.mat, isperm.iset, &info) ) def factorSymbolicICC(self, IS isperm not None, options=None): self; isperm; options; # unused raise NotImplementedError def getInertia(self): cdef PetscInt ival1 = 0, ival2 = 0, ival3 = 0 CHKERR( MatGetInertia(self.mat, &ival1, &ival2, &ival3) ) return (toInt(ival1), toInt(ival2), toInt(ival3)) def setUnfactored(self): CHKERR( MatSetUnfactored(self.mat) ) # MUMPS def setMumpsIcntl(self, icntl, ival): cdef PetscInt _icntl = asInt(icntl) cdef PetscInt _ival = asInt(ival) CHKERR( MatMumpsSetIcntl(self.mat, _icntl, _ival) ); def getMumpsIcntl(self, icntl): cdef PetscInt _icntl = asInt(icntl) cdef PetscInt ival = 0 CHKERR( MatMumpsGetIcntl(self.mat, _icntl, &ival) ); return toInt(ival) def setMumpsCntl(self, icntl, val): cdef PetscInt _icntl = asInt(icntl) cdef PetscReal _val = asReal(val) CHKERR( MatMumpsSetCntl(self.mat, _icntl, _val) ); def getMumpsCntl(self, icntl): cdef PetscInt _icntl = asInt(icntl) cdef PetscReal val = 0 CHKERR( MatMumpsGetCntl(self.mat, _icntl, &val) ); return toReal(val) def getMumpsInfo(self, icntl): cdef PetscInt _icntl = asInt(icntl) cdef PetscInt ival = 0 CHKERR( MatMumpsGetInfo(self.mat, _icntl, &ival) ); return toInt(ival) def getMumpsInfog(self, icntl): cdef PetscInt _icntl = asInt(icntl) cdef PetscInt ival = 0 CHKERR( MatMumpsGetInfog(self.mat, _icntl, &ival) ); return toInt(ival) def getMumpsRinfo(self, icntl): cdef PetscInt _icntl = asInt(icntl) cdef PetscReal val = 0 CHKERR( MatMumpsGetRinfo(self.mat, _icntl, &val) ); return toReal(val) def getMumpsRinfog(self, icntl): cdef PetscInt _icntl = asInt(icntl) cdef PetscReal val = 0 CHKERR( MatMumpsGetRinfog(self.mat, _icntl, &val) ); return toReal(val) # solve def solveForward(self, Vec b not None, Vec x not None): CHKERR( MatForwardSolve(self.mat, b.vec, x.vec) ) def solveBackward(self, Vec b not None, Vec x not None): CHKERR( MatBackwardSolve(self.mat, b.vec, x.vec) ) def solve(self, Vec b not None, Vec x not None): CHKERR( MatSolve(self.mat, b.vec, x.vec) ) def solveTranspose(self, Vec b not None, Vec x not None): CHKERR( MatSolveTranspose(self.mat, b.vec, x.vec) ) def solveAdd(self, Vec b not None, Vec y, Vec x not None): CHKERR( MatSolveAdd(self.mat, b.vec, y.vec, x.vec) ) def solveTransposeAdd(self, Vec b not None, Vec y, Vec x not None): CHKERR( MatSolveTransposeAdd(self.mat, b.vec, y.vec, x.vec) ) def matSolve(self, Mat B not None, Mat X not None): CHKERR( MatMatSolve(self.mat, B.mat, X.mat) ) # dense matrices def getDenseArray(self): cdef PetscInt m=0, N=0, lda=0 cdef PetscScalar *data = NULL CHKERR( MatGetLocalSize(self.mat, &m, NULL) ) CHKERR( MatGetSize(self.mat, NULL, &N) ) lda = m # CHKERR( MatDenseGetLDA(self.mat, &ld) ) CHKERR( MatDenseGetArray(self.mat, &data) ) cdef int typenum = NPY_PETSC_SCALAR cdef int itemsize = sizeof(PetscScalar) cdef int flags = NPY_ARRAY_FARRAY cdef npy_intp dims[2], strides[2] dims[0] = m; strides[0] = sizeof(PetscScalar); dims[1] = N; strides[1] = (lda*sizeof(PetscScalar)); array = PyArray_New(ndarray, 2, dims, typenum, strides, data, itemsize, flags, NULL) CHKERR( MatDenseRestoreArray(self.mat, &data) ) return array def getDenseLocalMatrix(self): cdef Mat mat = type(self)() CHKERR( MatDenseGetLocalMatrix(self.mat, &mat.mat) ) PetscINCREF(mat.obj) return mat # property sizes: def __get__(self): return self.getSizes() def __set__(self, value): self.setSizes(value) property size: def __get__(self): return self.getSize() property local_size: def __get__(self): return self.getLocalSize() property block_size: def __get__(self): return self.getBlockSize() property block_sizes: def __get__(self): return self.getBlockSizes() property owner_range: def __get__(self): return self.getOwnershipRange() property owner_ranges: def __get__(self): return self.getOwnershipRanges() # property assembled: def __get__(self): return self.isAssembled() property symmetric: def __get__(self): return self.isSymmetric() property hermitian: def __get__(self): return self.isHermitian() property structsymm: def __get__(self): return self.isStructurallySymmetric() # -------------------------------------------------------------------- cdef class NullSpace(Object): # def __cinit__(self): self.obj = &self.nsp self.nsp = NULL def __call__(self, vec): self.remove(vec) # def view(self, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( MatNullSpaceView(self.nsp, vwr) ) def destroy(self): CHKERR( MatNullSpaceDestroy(&self.nsp) ) return self def create(self, constant=False, vectors=(), comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscBool has_const = PETSC_FALSE if constant: has_const = PETSC_TRUE cdef PetscInt i = 0, nv = len(vectors) cdef PetscVec *v = NULL cdef object tmp2 = oarray_p(empty_p(nv), NULL, &v) for i from 0 <= i < nv: v[i] = ((vectors[i])).vec cdef PetscNullSpace newnsp = NULL CHKERR( MatNullSpaceCreate(ccomm, has_const, nv, v, &newnsp) ) PetscCLEAR(self.obj); self.nsp = newnsp return self def createRigidBody(self, Vec coords not None): cdef PetscNullSpace newnsp = NULL CHKERR( MatNullSpaceCreateRigidBody(coords.vec, &newnsp) ) PetscCLEAR(self.obj); self.nsp = newnsp return self def setFunction(self, function, args=None, kargs=None): if function is not None: CHKERR( MatNullSpaceSetFunction( self.nsp, NullSpace_Function, NULL) ) if args is None: args = () if kargs is None: kargs = {} self.set_attr('__function__', (function, args, kargs)) else: CHKERR( MatNullSpaceSetFunction(self.nsp, NULL, NULL) ) self.set_attr('__function__', None) # def hasConstant(self): cdef PetscBool flag = PETSC_FALSE CHKERR( MatNullSpaceGetVecs(self.nsp, &flag, NULL, NULL) ) return flag def getVecs(self): cdef PetscInt i = 0, nv = 0 cdef const_PetscVec *v = NULL CHKERR( MatNullSpaceGetVecs(self.nsp, NULL, &nv, &v) ) cdef Vec vec = None cdef list vectors = [] for i from 0 <= i < nv: vec = Vec() vec.vec = v[i] PetscINCREF(vec.obj) vectors.append(vec) return vectors def getFunction(self): return self.get_attr('__function__') # def remove(self, Vec vec not None): CHKERR( MatNullSpaceRemove(self.nsp, vec.vec) ) # -------------------------------------------------------------------- del MatType del MatOption del MatAssemblyType del MatInfoType del MatStructure del MatOrderingType del MatFactorShiftType del MatSORType # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscis.pxi0000644000175000001440000001705512711377604020002 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef PetscIS const_PetscIS "const PetscIS" ctypedef char* PetscISType "const char*" PetscISType ISGENERAL PetscISType ISSTRIDE PetscISType ISBLOCK int ISView(PetscIS,PetscViewer) int ISDestroy(PetscIS*) int ISCreate(MPI_Comm,PetscIS*) int ISSetType(PetscIS,PetscISType) int ISGetType(PetscIS,PetscISType*) int ISCreateGeneral(MPI_Comm,PetscInt,PetscInt[],PetscCopyMode,PetscIS*) int ISCreateBlock(MPI_Comm,PetscInt,PetscInt,PetscInt[],PetscCopyMode,PetscIS*) int ISCreateStride(MPI_Comm,PetscInt,PetscInt,PetscInt,PetscIS*) int ISLoad(PetscIS,PetscViewer) int ISDuplicate(PetscIS,PetscIS*) int ISCopy(PetscIS,PetscIS) int ISAllGather(PetscIS,PetscIS*) int ISInvertPermutation(PetscIS,PetscInt,PetscIS*) int ISGetSize(PetscIS,PetscInt*) int ISGetLocalSize(PetscIS,PetscInt*) int ISGetBlockSize(PetscIS,PetscInt*) int ISSetBlockSize(PetscIS,PetscInt) int ISGetIndices(PetscIS,const_PetscInt*[]) int ISRestoreIndices(PetscIS,const_PetscInt*[]) int ISEqual(PetscIS,PetscIS,PetscBool*) int ISSetPermutation(PetscIS) int ISPermutation(PetscIS,PetscBool*) int ISSetIdentity(PetscIS) int ISIdentity(PetscIS,PetscBool*) int ISSort(PetscIS) int ISSorted(PetscIS,PetscBool*) int ISSum(PetscIS,PetscIS,PetscIS*) int ISExpand(PetscIS,PetscIS,PetscIS*) int ISDifference(PetscIS,PetscIS,PetscIS*) int ISComplement(PetscIS,PetscInt,PetscInt,PetscIS*) int ISEmbed(PetscIS,PetscIS,PetscBool,PetscIS*) int ISGeneralSetIndices(PetscIS,PetscInt,PetscInt[],PetscCopyMode) int ISBlockSetIndices(PetscIS,PetscInt,PetscInt,PetscInt[],PetscCopyMode) int ISBlockGetIndices(PetscIS,const_PetscInt*[]) int ISBlockRestoreIndices(PetscIS,const_PetscInt*[]) int ISStrideSetStride(PetscIS,PetscInt,PetscInt,PetscInt) int ISStrideGetInfo(PetscIS,PetscInt*,PetscInt*) int ISToGeneral(PetscIS) cdef extern from * nogil: ctypedef enum PetscGLMapType "ISGlobalToLocalMappingType": PETSC_IS_GTOLM_MASK "IS_GTOLM_MASK" PETSC_IS_GTOLM_DROP "IS_GTOLM_DROP" int ISLocalToGlobalMappingCreate(MPI_Comm,PetscInt,PetscInt,PetscInt[],PetscCopyMode,PetscLGMap*) int ISLocalToGlobalMappingCreateIS(PetscIS,PetscLGMap*) int ISLocalToGlobalMappingCreateSF(PetscSF,PetscInt,PetscLGMap*) int ISLocalToGlobalMappingView(PetscLGMap,PetscViewer) int ISLocalToGlobalMappingDestroy(PetscLGMap*) int ISLocalToGlobalMappingGetSize(PetscLGMap,PetscInt*) int ISLocalToGlobalMappingGetBlockSize(PetscLGMap,PetscInt*) int ISLocalToGlobalMappingGetIndices(PetscLGMap,const_PetscInt*[]) int ISLocalToGlobalMappingRestoreIndices(PetscLGMap,const_PetscInt*[]) int ISLocalToGlobalMappingGetBlockIndices(PetscLGMap,const_PetscInt*[]) int ISLocalToGlobalMappingRestoreBlockIndices(PetscLGMap,const_PetscInt*[]) int ISLocalToGlobalMappingGetInfo(PetscLGMap,PetscInt*,PetscInt*[],PetscInt*[],PetscInt**[]) int ISLocalToGlobalMappingRestoreInfo(PetscLGMap,PetscInt*,PetscInt*[],PetscInt*[],PetscInt**[]) int ISLocalToGlobalMappingGetBlockInfo(PetscLGMap,PetscInt*,PetscInt*[],PetscInt*[],PetscInt**[]) int ISLocalToGlobalMappingRestoreBlockInfo(PetscLGMap,PetscInt*,PetscInt*[],PetscInt*[],PetscInt**[]) int ISLocalToGlobalMappingApply(PetscLGMap,PetscInt,PetscInt[],PetscInt[]) int ISLocalToGlobalMappingApplyBlock(PetscLGMap,PetscInt,PetscInt[],PetscInt[]) int ISLocalToGlobalMappingApplyIS(PetscLGMap,PetscIS,PetscIS*) int ISGlobalToLocalMappingApply(PetscLGMap,PetscGLMapType,PetscInt,PetscInt[],PetscInt*,PetscInt[]) int ISGlobalToLocalMappingApplyBlock(PetscLGMap,PetscGLMapType,PetscInt,PetscInt[],PetscInt*,PetscInt[]) # -------------------------------------------------------------------- cdef inline IS ref_IS(PetscIS iset): cdef IS ob = IS() ob.iset = iset PetscINCREF(ob.obj) return ob cdef inline LGMap ref_LGMap(PetscLGMap lgm): cdef LGMap ob = LGMap() ob.lgm = lgm PetscINCREF(ob.obj) return ob # -------------------------------------------------------------------- cdef extern from "pep3118.h": int PyPetscBuffer_FillInfo(Py_buffer*, void*,PetscInt,char, int,int) except -1 void PyPetscBuffer_Release(Py_buffer*) # -------------------------------------------------------------------- cdef class _IS_buffer: cdef PetscIS iset cdef PetscInt size cdef const_PetscInt *data cdef bint hasarray def __cinit__(self, IS iset not None): cdef PetscIS i = iset.iset CHKERR( PetscINCREF(&i) ) self.iset = i self.size = 0 self.data = NULL self.hasarray = 0 def __dealloc__(self): if self.hasarray and self.iset != NULL: CHKERR( ISRestoreIndices(self.iset, &self.data) ) CHKERR( ISDestroy(&self.iset) ) # cdef int acquire(self) except -1: if not self.hasarray and self.iset != NULL: CHKERR( ISGetLocalSize(self.iset, &self.size) ) CHKERR( ISGetIndices(self.iset, &self.data) ) self.hasarray = 1 return 0 cdef int release(self) except -1: if self.hasarray and self.iset != NULL: self.size = 0 CHKERR( ISRestoreIndices(self.iset, &self.data) ) self.hasarray = 0 self.data = NULL return 0 # buffer interface (PEP 3118) cdef int acquirebuffer(self, Py_buffer *view, int flags) except -1: self.acquire() PyPetscBuffer_FillInfo(view, self.data, self.size, c'i', 1, flags) view.obj = self return 0 cdef int releasebuffer(self, Py_buffer *view) except -1: PyPetscBuffer_Release(view) self.release() return 0 def __getbuffer__(self, Py_buffer *view, int flags): self.acquirebuffer(view, flags) def __releasebuffer__(self, Py_buffer *view): self.releasebuffer(view) # 'with' statement (PEP 343) cdef object enter(self): self.acquire() return asarray(self) cdef object exit(self): self.release() return None def __enter__(self): return self.enter() def __exit__(self, *exc): return self.exit() # buffer interface (legacy) cdef Py_ssize_t getbuffer(self, void **p) except -1: cdef PetscInt n = 0 if p != NULL: self.acquire() p[0] = self.data n = self.size elif self.iset != NULL: CHKERR( ISGetLocalSize(self.iset, &n) ) return (n*sizeof(PetscInt)) def __getsegcount__(self, Py_ssize_t *lenp): if lenp != NULL: lenp[0] = self.getbuffer(NULL) return 1 def __getreadbuffer__(self, Py_ssize_t idx, void **p): if idx != 0: raise SystemError( "accessing non-existent buffer segment") return self.getbuffer(p) # NumPy array interface (legacy) property __array_interface__: def __get__(self): cdef PetscInt n = 0 if self.iset != NULL: CHKERR( ISGetLocalSize(self.iset, &n) ) cdef object size = toInt(n) cdef dtype descr = PyArray_DescrFromType(NPY_PETSC_INT) cdef str typestr = "=%c%d" % (descr.kind, descr.itemsize) return dict(version=3, data=self, shape=(size,), typestr=typestr) # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/SF.pyx0000644000175000001440000000625512711377604016660 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class SFType(object): BASIC = S_(PETSCSFBASIC) WINDOW = S_(PETSCSFWINDOW) # -------------------------------------------------------------------- cdef class SF(Object): Type = SFType def __cinit__(self): self.obj = &self.sf self.sf = NULL def __dealloc__(self): CHKERR( PetscSFDestroy(&self.sf) ) self.sf = NULL def view(self, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( PetscSFView(self.sf, vwr) ) def destroy(self): CHKERR( PetscSFDestroy(&self.sf) ) return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscSF newsf = NULL CHKERR( PetscSFCreate(ccomm, &newsf) ) PetscCLEAR(self.obj); self.sf = newsf return self def setType(self, sf_type): cdef PetscSFType cval = NULL sf_type = str2bytes(sf_type, &cval) CHKERR( PetscSFSetType(self.sf, cval) ) def getType(self): cdef PetscSFType cval = NULL CHKERR( PetscObjectGetType(self.sf, &cval) ) return bytes2str(cval) def setFromOptions(self): CHKERR( PetscSFSetFromOptions(self.sf) ) def setUp(self): CHKERR( PetscSFSetUp(self.sf) ) def reset(self): CHKERR( PetscSFReset(self.sf) ) # def getGraph(self): cdef PetscInt nroots = 0, nleaves = 0 cdef const_PetscInt *ilocal = NULL cdef const_PetscSFNode *iremote = NULL CHKERR( PetscSFGetGraph(self.sf, &nroots, &nleaves, &ilocal, &iremote) ) local = array_i(nleaves, ilocal) remote = [] for i in range(toInt(nleaves)): sfnode = (toInt(iremote[asInt(i)].rank), toInt(iremote[asInt(i)].index)) remote.append( sfnode ) return toInt(nroots), toInt(nleaves), local, remote def setGraph(self, nroots, nleaves, local, remote): cdef PetscInt cnroots = asInt(nroots) cdef PetscInt cnleaves = asInt(nleaves) cdef PetscInt nlocal = 0 cdef PetscInt *ilocal = NULL local = iarray_i(local, &nlocal, &ilocal) cdef PetscSFNode* iremote = NULL CHKERR( PetscMalloc(nleaves*sizeof(PetscSFNode), &iremote) ) cdef int i = 0 for rank, index in remote: iremote[i].rank = asInt(rank) iremote[i].index = asInt(index) i += 1 CHKERR( PetscSFSetGraph(self.sf, cnroots, cnleaves, ilocal, PETSC_COPY_VALUES, iremote, PETSC_OWN_POINTER) ) def setRankOrder(self, flag): cdef PetscBool bval = flag CHKERR( PetscSFSetRankOrder(self.sf, bval) ) # def getMulti(self): cdef SF sf = SF() CHKERR( PetscSFGetMultiSF(self.sf, &sf.sf) ) PetscINCREF(sf.obj) return sf def createInverse(self): cdef SF sf = SF() CHKERR( PetscSFCreateInverseSF(self.sf, &sf.sf) ) return sf # -------------------------------------------------------------------- del SFType # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscpartitioner.pxi0000644000175000001440000000133512711377604021721 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef char* PetscPartitionerType "const char*" PetscPartitionerType PETSCPARTITIONERCHACO PetscPartitionerType PETSCPARTITIONERPARMETIS PetscPartitionerType PETSCPARTITIONERSHELL int PetscPartitionerCreate(MPI_Comm,PetscPartitioner*) int PetscPartitionerDestroy(PetscPartitioner*) int PetscPartitionerView(PetscPartitioner,PetscViewer) int PetscPartitionerSetType(PetscPartitioner,PetscPartitionerType) int PetscPartitionerGetType(PetscPartitioner,PetscPartitionerType*) int PetscPartitionerSetFromOptions(PetscPartitioner) int PetscPartitionerSetUp(PetscPartitioner) int PetscPartitionerShellSetPartition(PetscPartitioner,PetscInt,PetscInt*,PetscInt*) petsc4py-3.7.0/src/PETSc/DM.pyx0000644000175000001440000003071612711377604016647 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class DMType(object): DA = S_(DMDA_type) COMPOSITE = S_(DMCOMPOSITE) SLICED = S_(DMSLICED) SHELL = S_(DMSHELL) PLEX = S_(DMPLEX) CARTESIAN = S_(DMCARTESIAN) REDUNDANT = S_(DMREDUNDANT) PATCH = S_(DMPATCH) MOAB = S_(DMMOAB) NETWORK = S_(DMNETWORK) class DMBoundaryType(object): NONE = DM_BOUNDARY_NONE GHOSTED = DM_BOUNDARY_GHOSTED MIRROR = DM_BOUNDARY_MIRROR PERIODIC = DM_BOUNDARY_PERIODIC TWIST = DM_BOUNDARY_TWIST # -------------------------------------------------------------------- cdef class DM(Object): Type = DMType BoundaryType = DMBoundaryType # def __cinit__(self): self.obj = &self.dm self.dm = NULL def view(self, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( DMView(self.dm, vwr) ) def destroy(self): CHKERR( DMDestroy(&self.dm) ) return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscDM newdm = NULL CHKERR( DMCreate(ccomm, &newdm) ) PetscCLEAR(self.obj); self.dm = newdm return self def clone(self): cdef DM dm = type(self)() CHKERR( DMClone(self.dm, &dm.dm) ) return dm def setType(self, dm_type): cdef const_char *cval = NULL dm_type = str2bytes(dm_type, &cval) CHKERR( DMSetType(self.dm, cval) ) def getType(self): cdef PetscDMType cval = NULL CHKERR( DMGetType(self.dm, &cval) ) return bytes2str(cval) def getDimension(self): cdef PetscInt dim = 0 CHKERR( DMGetDimension(self.dm, &dim) ) return toInt(dim) def setDimension(self, dim): cdef PetscInt cdim = asInt(dim) CHKERR( DMSetDimension(self.dm, cdim) ) def setOptionsPrefix(self, prefix): cdef const_char *cval = NULL prefix = str2bytes(prefix, &cval) CHKERR( DMSetOptionsPrefix(self.dm, cval) ) def setFromOptions(self): CHKERR( DMSetFromOptions(self.dm) ) def setUp(self): CHKERR( DMSetUp(self.dm) ) return self # --- application context --- def setAppCtx(self, appctx): self.set_attr('__appctx__', appctx) def getAppCtx(self): return self.get_attr('__appctx__') # def getBlockSize(self): cdef PetscInt bs = 1 CHKERR( DMGetBlockSize(self.dm, &bs) ) return toInt(bs) def setVecType(self, vec_type): cdef PetscVecType vtype = NULL vec_type = str2bytes(vec_type, &vtype) CHKERR( DMSetVecType(self.dm, vtype) ) def createGlobalVec(self): cdef Vec vg = Vec() CHKERR( DMCreateGlobalVector(self.dm, &vg.vec) ) return vg def createLocalVec(self): cdef Vec vl = Vec() CHKERR( DMCreateLocalVector(self.dm, &vl.vec) ) return vl def globalToLocal(self, Vec vg not None, Vec vl not None, addv=None): cdef PetscInsertMode im = insertmode(addv) CHKERR( DMGlobalToLocalBegin(self.dm, vg.vec, im, vl.vec) ) CHKERR( DMGlobalToLocalEnd (self.dm, vg.vec, im, vl.vec) ) def localToGlobal(self, Vec vl not None, Vec vg not None, addv=None): cdef PetscInsertMode im = insertmode(addv) CHKERR( DMLocalToGlobalBegin(self.dm, vl.vec, im, vg.vec) ) CHKERR( DMLocalToGlobalEnd(self.dm, vl.vec, im, vg.vec) ) def localToLocal(self, Vec vl not None, Vec vlg not None, addv=None): cdef PetscInsertMode im = insertmode(addv) CHKERR( DMLocalToLocalBegin(self.dm, vl.vec, im, vlg.vec) ) CHKERR( DMLocalToLocalEnd (self.dm, vl.vec, im, vlg.vec) ) def getLGMap(self): cdef LGMap lgm = LGMap() CHKERR( DMGetLocalToGlobalMapping(self.dm, &lgm.lgm) ) PetscINCREF(lgm.obj) return lgm # def getCoordinateDM(self): cdef DM cdm = type(self)() CHKERR( DMGetCoordinateDM(self.dm, &cdm.dm) ) PetscINCREF(cdm.obj) return cdm def getCoordinateSection(self): cdef Section sec = Section() CHKERR( DMGetCoordinateSection(self.dm, &sec.sec) ) PetscINCREF(sec.obj) return sec def setCoordinates(self, Vec c not None): CHKERR( DMSetCoordinates(self.dm, c.vec) ) def getCoordinates(self): cdef Vec c = Vec() CHKERR( DMGetCoordinates(self.dm, &c.vec) ) PetscINCREF(c.obj) return c def setCoordinatesLocal(self, Vec c not None): CHKERR( DMSetCoordinatesLocal(self.dm, c.vec) ) def getCoordinatesLocal(self): cdef Vec c = Vec() CHKERR( DMGetCoordinatesLocal(self.dm, &c.vec) ) PetscINCREF(c.obj) return c # def setMatType(self, mat_type): """Set matrix type to be used by DM.createMat""" cdef PetscMatType mtype = NULL mat_type = str2bytes(mat_type, &mtype) CHKERR( DMSetMatType(self.dm, mtype) ) def createMat(self): cdef Mat mat = Mat() CHKERR( DMCreateMatrix(self.dm, &mat.mat) ) return mat def createInterpolation(self, DM dm not None): cdef Mat A = Mat() cdef Vec scale = Vec() CHKERR( DMCreateInterpolation(self.dm, dm.dm, &A.mat, &scale.vec)) return(A, scale) def createInjection(self, DM dm not None): cdef Mat inject = Mat() CHKERR( DMCreateInjection(self.dm, dm.dm, &inject.mat) ) return inject def createAggregates(self, DM dm not None): cdef Mat mat = Mat() CHKERR( DMCreateAggregates(self.dm, dm.dm, &mat.mat) ) return mat def convert(self, dm_type): cdef const_char *cval = NULL dm_type = str2bytes(dm_type, &cval) cdef PetscDM newdm = NULL CHKERR( DMConvert(self.dm, cval, &newdm) ) cdef DM dm = subtype_DM(newdm)() dm.dm = newdm return dm def refine(self, comm=None): cdef MPI_Comm dmcomm = MPI_COMM_NULL CHKERR( PetscObjectGetComm(self.dm, &dmcomm) ) dmcomm = def_Comm(comm, dmcomm) cdef PetscDM newdm = NULL CHKERR( DMRefine(self.dm, dmcomm, &newdm) ) cdef DM dm = subtype_DM(newdm)() dm.dm = newdm return dm def coarsen(self, comm=None): cdef MPI_Comm dmcomm = MPI_COMM_NULL CHKERR( PetscObjectGetComm(self.dm, &dmcomm) ) dmcomm = def_Comm(comm, dmcomm) cdef PetscDM newdm = NULL CHKERR( DMCoarsen(self.dm, dmcomm, &newdm) ) cdef DM dm = subtype_DM(newdm)() dm.dm = newdm return dm def refineHierarchy(self, nlevels): cdef PetscInt i, n = asInt(nlevels) cdef PetscDM *newdmf = NULL cdef object tmp = oarray_p(empty_p(n), NULL, &newdmf) CHKERR( DMRefineHierarchy(self.dm, n, newdmf) ) cdef DM dmf = None cdef list hierarchy = [] for i from 0 <= i < n: dmf = subtype_DM(newdmf[i])() dmf.dm = newdmf[i] hierarchy.append(dmf) return hierarchy def coarsenHierarchy(self, nlevels): cdef PetscInt i, n = asInt(nlevels) cdef PetscDM *newdmc = NULL cdef object tmp = oarray_p(empty_p(n),NULL, &newdmc) CHKERR( DMCoarsenHierarchy(self.dm, n, newdmc) ) cdef DM dmc = None cdef list hierarchy = [] for i from 0 <= i < n: dmc = subtype_DM(newdmc[i])() dmc.dm = newdmc[i] hierarchy.append(dmc) return hierarchy # def setDefaultSection(self, Section sec not None): CHKERR( DMSetDefaultSection(self.dm, sec.sec) ) def getDefaultSection(self): cdef Section sec = Section() CHKERR( DMGetDefaultSection(self.dm, &sec.sec) ) PetscINCREF(sec.obj) return sec def setDefaultGlobalSection(self, Section sec not None): CHKERR( DMSetDefaultGlobalSection(self.dm, sec.sec) ) def getDefaultGlobalSection(self): cdef Section sec = Section() CHKERR( DMGetDefaultGlobalSection(self.dm, &sec.sec) ) PetscINCREF(sec.obj) return sec def createDefaultSF(self, Section localsec not None, Section globalsec not None): CHKERR( DMCreateDefaultSF(self.dm, localsec.sec, globalsec.sec) ) def getDefaultSF(self): cdef SF sf = SF() CHKERR( DMGetDefaultSF(self.dm, &sf.sf) ) PetscINCREF(sf.obj) return sf def getPointSF(self): cdef SF sf = SF() CHKERR( DMGetPointSF(self.dm, &sf.sf) ) PetscINCREF(sf.obj) return sf def setPointSF(self, SF sf not None): CHKERR( DMSetPointSF(self.dm, sf.sf) ) def getNumLabels(self): cdef PetscInt nLabels = 0 CHKERR( DMGetNumLabels(self.dm, &nLabels) ) return toInt(nLabels) def getLabelName(self, index): cdef PetscInt cindex = asInt(index) cdef const_char *cname = NULL CHKERR( DMGetLabelName(self.dm, cindex, &cname) ) return bytes2str(cname) def hasLabel(self, name): cdef PetscBool flag = PETSC_FALSE cdef const_char *cname = NULL name = str2bytes(name, &cname) CHKERR( DMHasLabel(self.dm, cname, &flag) ) return flag def createLabel(self, name): cdef const_char *cname = NULL name = str2bytes(name, &cname) CHKERR( DMCreateLabel(self.dm, cname) ) def removeLabel(self, name): cdef const_char *cname = NULL cdef PetscDMLabel clbl = NULL name = str2bytes(name, &cname) CHKERR( DMRemoveLabel(self.dm, cname, &clbl) ) # CHKERR( DMLabelDestroy(&clbl) ) def getLabelValue(self, name, point): cdef PetscInt cpoint = asInt(point), value = 0 cdef const_char *cname = NULL name = str2bytes(name, &cname) CHKERR( DMGetLabelValue(self.dm, cname, cpoint, &value) ) return toInt(value) def setLabelValue(self, name, point, value): cdef PetscInt cpoint = asInt(point), cvalue = asInt(value) cdef const_char *cname = NULL name = str2bytes(name, &cname) CHKERR( DMSetLabelValue(self.dm, cname, cpoint, cvalue) ) def clearLabelValue(self, name, point, value): cdef PetscInt cpoint = asInt(point), cvalue = asInt(value) cdef const_char *cname = NULL name = str2bytes(name, &cname) CHKERR( DMClearLabelValue(self.dm, cname, cpoint, cvalue) ) def getLabelSize(self, name): cdef PetscInt size = 0 cdef const_char *cname = NULL name = str2bytes(name, &cname) CHKERR( DMGetLabelSize(self.dm, cname, &size) ) return toInt(size) def getLabelIdIS(self, name): cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef IS lis = IS() CHKERR( DMGetLabelIdIS(self.dm, cname, &lis.iset) ) return lis def getStratumSize(self, name, value): cdef PetscInt size = 0 cdef PetscInt cvalue = asInt(value) cdef const_char *cname = NULL name = str2bytes(name, &cname) CHKERR( DMGetStratumSize(self.dm, cname, cvalue, &size) ) return toInt(size) def getStratumIS(self, name, value): cdef PetscInt cvalue = asInt(value) cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef IS sis = IS() CHKERR( DMGetStratumIS(self.dm, cname, cvalue, &sis.iset) ) return sis def clearLabelStratum(self, name, value): cdef PetscInt cvalue = asInt(value) cdef const_char *cname = NULL name = str2bytes(name, &cname) CHKERR( DMClearLabelStratum(self.dm, cname, cvalue) ) def setLabelOutput(self, name, output): cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef PetscBool coutput = output CHKERR( DMSetLabelOutput(self.dm, cname, coutput) ) def getLabelOutput(self, name): cdef const_char *cname = NULL name = str2bytes(name, &cname) cdef PetscBool coutput = PETSC_FALSE CHKERR( DMGetLabelOutput(self.dm, cname, &coutput) ) return coutput # backward compatibility createGlobalVector = createGlobalVec createLocalVector = createLocalVec getMatrix = createMatrix = createMat # -------------------------------------------------------------------- del DMType del DMBoundaryType # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/cyclicgc.pxi0000644000175000001440000000263412711377604020105 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from "stdio.h" nogil: int printf(char *, ...) cdef extern from "Python.h": ctypedef struct PyObject ctypedef struct PyTypeObject ctypedef int visitproc(PyObject *, void *) ctypedef int traverseproc(PyObject *, visitproc, void *) ctypedef int inquiry(PyObject *) ctypedef struct PyTypeObject: char* tp_name traverseproc tp_traverse inquiry tp_clear PyTypeObject *Py_TYPE(PyObject *) ctypedef struct PyGC_Head: Py_ssize_t gc_refs"gc.gc_refs" PyGC_Head *_Py_AS_GC(PyObject*) cdef int tp_traverse(PyObject *o, visitproc visit, void *arg): ## printf("%s.tp_traverse(%p)\n", Py_TYPE(o).tp_name, o) cdef PetscObject p = (o).obj[0] if p == NULL: return 0 cdef PyObject *d = p.python_context if d == NULL: return 0 if arg == NULL and _Py_AS_GC(d).gc_refs == 0: _Py_AS_GC(d).gc_refs = 1 return visit(d, arg) cdef int tp_clear(PyObject *o): ## printf("%s.tp_clear(%p)\n", Py_TYPE(o).tp_name, o) cdef PetscObject *p = (o).obj PetscDEALLOC(p) return 0 cdef inline void TypeEnableGC(PyTypeObject *t): ## printf("%s: enforcing GC support\n", t.tp_name) t.tp_traverse = tp_traverse t.tp_clear = tp_clear # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscsys.pxi0000644000175000001440000000660412711377604020203 0ustar dalcinlusers00000000000000cdef extern from * nogil: enum: PETSC_VERSION_MAJOR enum: PETSC_VERSION_MINOR enum: PETSC_VERSION_SUBMINOR enum: PETSC_VERSION_PATCH enum: PETSC_VERSION_RELEASE char* PETSC_VERSION_DATE char* PETSC_AUTHOR_INFO bint PETSC_VERSION_LT(int,int,int) bint PETSC_VERSION_LE(int,int,int) bint PETSC_VERSION_EQ(int,int,int) bint PETSC_VERSION_GE(int,int,int) bint PETSC_VERSION_GT(int,int,int) int PetscInitialize(int*,char***,char[],char[]) int PetscInitializeNoArguments() int PetscFinalize() PetscBool PetscInitializeCalled PetscBool PetscFinalizeCalled ctypedef enum PetscErrorType: PETSC_ERROR_INITIAL PETSC_ERROR_REPEAT ctypedef int (*PetscErrorHandlerFunction)(MPI_Comm,int,char*,char*, int,PetscErrorType,char*,void*) PetscErrorHandlerFunction PetscAttachDebuggerErrorHandler PetscErrorHandlerFunction PetscEmacsClientErrorHandler PetscErrorHandlerFunction PetscTraceBackErrorHandler PetscErrorHandlerFunction PetscMPIAbortErrorHandler PetscErrorHandlerFunction PetscAbortErrorHandler PetscErrorHandlerFunction PetscIgnoreErrorHandler int PetscPushErrorHandler(PetscErrorHandlerFunction,void*) int PetscPopErrorHandler() int PetscInfoAllow(PetscBool, char*) int PetscErrorMessage(int,char*[],char**) int PetscSplitOwnership(MPI_Comm,PetscInt*,PetscInt*) int PetscSplitOwnershipBlock(MPI_Comm,PetscInt,PetscInt*,PetscInt*) FILE *PETSC_STDOUT FILE *PETSC_STDERR int PetscPrintf(MPI_Comm,char[],...) int PetscSynchronizedPrintf(MPI_Comm,char[],...) int PetscSynchronizedFlush(MPI_Comm,FILE*) int PetscSequentialPhaseBegin(MPI_Comm,int) int PetscSequentialPhaseEnd(MPI_Comm,int) int PetscSleep(int) int PetscCitationsRegister(const char[],PetscBool*) cdef inline int Sys_Sizes( object size, object bsize, PetscInt *_b, PetscInt *_n, PetscInt *_N, ) except -1: # get block size cdef PetscInt bs=PETSC_DECIDE, b=PETSC_DECIDE if bsize is not None: bs = b = asInt(bsize) if bs == PETSC_DECIDE: bs = 1 # unpack and get local and global sizes cdef PetscInt n=PETSC_DECIDE, N=PETSC_DECIDE cdef object on, oN try: on, oN = size except (TypeError, ValueError): on = None; oN = size if on is not None: n = asInt(on) if oN is not None: N = asInt(oN) # check block, local, and and global sizes if (bs < 1): raise ValueError( "block size %d must be positive" % toInt(bs)) if n==PETSC_DECIDE and N==PETSC_DECIDE: raise ValueError( "local and global sizes cannot be both 'DECIDE'") if (n > 0) and (n % bs): raise ValueError( "local size %d not divisible by block size %d" % (toInt(n), toInt(bs)) ) if (N > 0) and (N % bs): raise ValueError( "global size %d not divisible by block size %d" % (toInt(N), toInt(bs)) ) # return result to the caller if _b != NULL: _b[0] = b if _n != NULL: _n[0] = n if _N != NULL: _N[0] = N return 0 cdef inline int Sys_Layout( MPI_Comm comm, PetscInt bs, PetscInt *_n, PetscInt *_N, ) except -1: cdef PetscInt n = _n[0] cdef PetscInt N = _N[0] if bs < 0: bs = 1 if n > 0: n = n // bs if N > 0: N = N // bs CHKERR( PetscSplitOwnership(comm, &n, &N) ) _n[0] = n * bs _N[0] = N * bs return 0 petsc4py-3.7.0/src/PETSc/petsclog.pxi0000644000175000001440000000543312711377604020145 0ustar dalcinlusers00000000000000cdef extern from * nogil: ctypedef double PetscLogDouble ctypedef struct PetscEventPerfInfo: int count PetscLogDouble flops, time PetscLogDouble numMessages PetscLogDouble messageLength PetscLogDouble numReductions int PetscLogDefaultBegin() int PetscLogAllBegin() int PetscLogView(PetscViewer) int PetscLogDestroy() int PetscLogFlops(PetscLogDouble) int PetscGetFlops(PetscLogDouble*) int PetscGetCPUTime(PetscLogDouble*) int PetscMallocGetCurrentUsage(PetscLogDouble*) int PetscMemoryGetCurrentUsage(PetscLogDouble*) int PetscTime(PetscLogDouble*) int PetscTimeSubtract(PetscLogDouble*) int PetscTimeAdd(PetscLogDouble*) ctypedef int PetscLogStage int PetscLogStageRegister(char[],PetscLogStage*) int PetscLogStagePush(PetscLogStage) int PetscLogStagePop() int PetscLogStageSetActive(PetscLogStage,PetscBool) int PetscLogStageGetActive(PetscLogStage,PetscBool*) int PetscLogStageSetVisible(PetscLogStage,PetscBool) int PetscLogStageGetVisible(PetscLogStage,PetscBool*) int PetscLogStageGetId(char[],PetscLogStage*) ctypedef int PetscLogClass "PetscClassId" int PetscLogClassRegister"PetscClassIdRegister"(char[],PetscLogClass*) int PetscLogClassActivate"PetscLogEventActivateClass"(PetscLogClass) int PetscLogClassDeactivate"PetscLogEventDeactivateClass"(PetscLogClass) ctypedef int PetscLogEvent int PetscLogEventRegister(char[],PetscLogClass,PetscLogEvent*) int PetscLogEventBegin(PetscLogEvent,PetscObject,PetscObject,PetscObject,PetscObject) int PetscLogEventEnd(PetscLogEvent,PetscObject,PetscObject,PetscObject,PetscObject) int PetscLogEventBarrierBegin(PetscLogEvent,PetscObject,PetscObject,PetscObject,PetscObject,MPI_Comm) int PetscLogEventBarrierEnd(PetscLogEvent,PetscObject,PetscObject,PetscObject,PetscObject,MPI_Comm) int PetscLogEventActivate(PetscLogEvent) int PetscLogEventDeactivate(PetscLogEvent) int PetscLogEventSetActiveAll(PetscLogEvent,PetscBool) int PetscLogEventGetPerfInfo(PetscLogStage,PetscLogEvent,PetscEventPerfInfo*) cdef extern from "custom.h" nogil: int PetscLogStageFindId(char[],PetscLogStage*) int PetscLogClassFindId(char[],PetscLogClass*) int PetscLogEventFindId(char[],PetscLogEvent*) int PetscLogStageFindName(PetscLogStage,char*[]) int PetscLogClassFindName(PetscLogClass,char*[]) int PetscLogEventFindName(PetscLogEvent,char*[]) cdef inline int event_args2objs(object args, PetscObject o[4]) except -1: o[0] = o[1] = o[2] = o[3] = NULL cdef Py_ssize_t i=0, n = len(args) cdef Object tmp = None if n > 4: n = 4 for 0 <= i < n: tmp = args[i] if tmp is not None: o[i] = tmp.obj[0] return 0 petsc4py-3.7.0/src/PETSc/DMPlex.pyx0000644000175000001440000005242112711377604017475 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef class DMPlex(DM): def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscDM newdm = NULL CHKERR( DMPlexCreate(ccomm, &newdm) ) PetscCLEAR(self.obj); self.dm = newdm return self def createFromCellList(self, dim, cells, coords, interpolate=True, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscBool interp = interpolate cdef PetscDM newdm = NULL cdef PetscInt cdim = asInt(dim) cdef PetscInt numCells = 0 cdef PetscInt numCorners = 0 cdef int *cellVertices = NULL cdef PetscInt numVertices = 0 cdef PetscInt spaceDim= 0 cdef double *vertexCoords = NULL cdef int npy_flags = NPY_ARRAY_ALIGNED|NPY_ARRAY_NOTSWAPPED|NPY_ARRAY_CARRAY cells = PyArray_FROM_OTF(cells, NPY_INT, npy_flags) coords = PyArray_FROM_OTF(coords, NPY_DOUBLE, npy_flags) if PyArray_NDIM(cells) != 2: raise ValueError( ("cell indices must have two dimensions: " "cells.ndim=%d") % (PyArray_NDIM(cells)) ) if PyArray_NDIM(coords) != 2: raise ValueError( ("coords vertices must have two dimensions: " "coords.ndim=%d") % (PyArray_NDIM(coords)) ) numCells = PyArray_DIM(cells, 0) numCorners = PyArray_DIM(cells, 1) numVertices = PyArray_DIM(coords, 0) spaceDim = PyArray_DIM(coords, 1) cellVertices = PyArray_DATA(cells) vertexCoords = PyArray_DATA(coords) CHKERR( DMPlexCreateFromCellList(ccomm, cdim, numCells, numVertices, numCorners, interp, cellVertices, spaceDim, vertexCoords, &newdm) ) PetscCLEAR(self.obj); self.dm = newdm return self def createBoxMesh(self, dim, interpolate=True, comm=None): cdef PetscInt cdim = asInt(dim) cdef PetscBool interp = interpolate cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscDM newdm = NULL CHKERR( DMPlexCreateBoxMesh(ccomm,cdim, interp, &newdm) ) PetscCLEAR(self.obj); self.dm = newdm return self def createHexBoxMesh(self, numcells, boundary_type=None, comm=None): cdef PetscInt dim = 0, *icells = NULL cdef object tmp = iarray_i(numcells, &dim, &icells) cdef PetscDMBoundaryType btx = DM_BOUNDARY_NONE cdef PetscDMBoundaryType bty = DM_BOUNDARY_NONE cdef PetscDMBoundaryType btz = DM_BOUNDARY_NONE if boundary_type is not None: asBoundary(boundary_type, &btx, &bty, &btz) cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscDM newdm = NULL CHKERR( DMPlexCreateHexBoxMesh(ccomm, dim, icells, btx, bty, btz, &newdm) ) PetscCLEAR(self.obj); self.dm = newdm return self def createCGNS(self, cgid, interpolate=True, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscBool interp = interpolate cdef PetscDM newdm = NULL cdef PetscInt ccgid = asInt(cgid) CHKERR( DMPlexCreateCGNS(ccomm, ccgid, interp, &newdm) ) PetscCLEAR(self.obj); self.dm = newdm return self def createCGNSFromFile(self, filename, interpolate=True, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscBool interp = interpolate cdef PetscDM newdm = NULL cdef const_char *cfile = NULL filename = str2bytes(filename, &cfile) CHKERR( DMPlexCreateCGNSFromFile(ccomm, cfile, interp, &newdm) ) PetscCLEAR(self.obj); self.dm = newdm return self def createExodusFromFile(self, filename, interpolate=True, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscBool interp = interpolate cdef PetscDM newdm = NULL cdef const_char *cfile = NULL filename = str2bytes(filename, &cfile) CHKERR( DMPlexCreateExodusFromFile(ccomm, cfile, interp, &newdm) ) PetscCLEAR(self.obj); self.dm = newdm return self def createExodus(self, exoid, interpolate=True, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscBool interp = interpolate cdef PetscDM newdm = NULL cdef PetscInt cexoid = asInt(exoid) CHKERR( DMPlexCreateExodus(ccomm, cexoid, interp, &newdm) ) PetscCLEAR(self.obj); self.dm = newdm return self def createGmsh(self, Viewer viewer, interpolate=True, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscBool interp = interpolate cdef PetscDM newdm = NULL CHKERR( DMPlexCreateGmsh(ccomm, viewer.vwr, interp, &newdm) ) PetscCLEAR(self.obj); self.dm = newdm return self def createCohesiveSubmesh(self, hasLagrange, value): cdef PetscBool flag = hasLagrange cdef PetscInt cvalue = asInt(value) cdef DM subdm = DMPlex() CHKERR( DMPlexCreateCohesiveSubmesh(self.dm, flag, NULL, cvalue, &subdm.dm) ) return subdm def getChart(self): cdef PetscInt pStart = 0, pEnd = 0 CHKERR( DMPlexGetChart(self.dm, &pStart, &pEnd) ) return toInt(pStart), toInt(pEnd) def setChart(self, pStart, pEnd): cdef PetscInt cStart = asInt(pStart) cdef PetscInt cEnd = asInt(pEnd) CHKERR( DMPlexSetChart(self.dm, cStart, cEnd) ) def getConeSize(self, p): cdef PetscInt cp = asInt(p) cdef PetscInt pStart = 0, pEnd = 0 CHKERR( DMPlexGetChart(self.dm, &pStart, &pEnd) ) assert cp>=pStart and cp=pStart and cp=pStart and cp=pStart and cp=pStart and cp=pStart and cp=pStart and cp=pStart and cp=pStart and cp=pStart and cp=pStart and cpsec.sec, &ccomm) ) CHKERR( PetscSectionCreate(ccomm, &newsec.sec) ) if newvec.vec == NULL: CHKERR( PetscObjectGetComm(vec.vec, &ccomm) ) CHKERR( VecCreate(ccomm, &newvec.vec) ) CHKERR( DMPlexDistributeField(self.dm, sf.sf, sec.sec, vec.vec, newsec.sec, newvec.vec)) return (newsec, newvec) def createCoarsePointIS(self): cdef IS fpoint = IS() CHKERR( DMPlexCreateCoarsePointIS(self.dm, &fpoint.iset) ) return fpoint def createSection(self, numComp, numDof, bcField=None, bcComps=None, bcPoints=None, IS perm=None): # topological dimension cdef PetscInt dim = 0 CHKERR( DMGetDimension(self.dm, &dim) ) # components and DOFs cdef PetscInt ncomp = 0, ndof = 0 cdef PetscInt *icomp = NULL, *idof = NULL numComp = iarray_i(numComp, &ncomp, &icomp) numDof = iarray_i(numDof, &ndof, &idof) assert ndof == ncomp*(dim+1) # boundary conditions cdef PetscInt nbc = 0, i = 0 cdef PetscInt *bcfield = NULL cdef PetscIS *bccomps = NULL cdef PetscIS *bcpoints = NULL if bcField is not None: bcField = iarray_i(bcField, &nbc, &bcfield) if bcComps is not None: bcComps = list(bcComps) assert len(bcComps) == nbc tmp1 = oarray_p(empty_p(nbc), NULL, &bccomps) for i from 0 <= i < nbc: bccomps[i] = (bcComps[i]).iset if bcPoints is not None: bcPoints = list(bcPoints) assert len(bcPoints) == nbc tmp2 = oarray_p(empty_p(nbc), NULL, &bcpoints) for i from 0 <= i < nbc: bcpoints[i] = (bcPoints[i]).iset else: raise ValueError("bcPoints is a required argument") else: assert bcComps is None assert bcPoints is None # optional chart permutations cdef PetscIS cperm = NULL if perm is not None: cperm = perm.iset # create section cdef Section sec = Section() CHKERR( DMPlexCreateSection(self.dm, dim, ncomp, icomp, idof, nbc, bcfield, bccomps, bcpoints, cperm, &sec.sec) ) return sec def setRefinementUniform(self, refinementUniform=True): cdef PetscBool flag = refinementUniform CHKERR( DMPlexSetRefinementUniform(self.dm, flag) ) def getRefinementUniform(self): cdef PetscBool flag = PETSC_FALSE CHKERR( DMPlexGetRefinementUniform(self.dm, &flag) ) return flag def setRefinementLimit(self, refinementLimit): cdef PetscReal rval = asReal(refinementLimit) CHKERR( DMPlexSetRefinementLimit(self.dm, rval) ) def getRefinementLimit(self): cdef PetscReal rval = 0.0 CHKERR( DMPlexGetRefinementLimit(self.dm, &rval) ) return toReal(rval) def getOrdering(self, otype): cdef PetscMatOrderingType cval = NULL cdef PetscDMLabel label = NULL otype = str2bytes(otype, &cval) cdef IS perm = IS() CHKERR( DMPlexGetOrdering(self.dm, cval, label, &perm.iset) ) return perm def permute(self, IS perm not None): cdef DMPlex dm = type(self)() CHKERR( DMPlexPermute(self.dm, perm.iset, &dm.dm) ) return dm # def computeCellGeometryFVM(self, cell): cdef PetscInt dim = 0 cdef PetscInt ccell = asInt(cell) CHKERR( DMGetDimension(self.dm, &dim) ) cdef PetscReal vol = 0, centroid[3], normal[3] CHKERR( DMPlexComputeCellGeometryFVM(self.dm, ccell, &vol, centroid, normal) ) return (toReal(vol), array_r(dim, centroid), array_r(dim, normal)) petsc4py-3.7.0/src/PETSc/Error.pyx0000644000175000001440000000162712711377604017437 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class Error(RuntimeError): _traceback_ = [] def __init__(self, int ierr=0): self.ierr = ierr RuntimeError.__init__(self, self.ierr) def __nonzero__(self): cdef int ierr = self.ierr return ierr != 0 def __repr__(self): return 'PETSc.Error(%d)' % self.ierr def __str__(self): cdef int csize=1, crank=0 if not (PetscFinalizeCalled): MPI_Comm_size(PETSC_COMM_WORLD, &csize) MPI_Comm_rank(PETSC_COMM_WORLD, &crank) width, rank = len(str(csize-1)), crank tblist = ['error code %d' % self.ierr] for entry in self._traceback_: tbline = '[%*d] %s' % (width, rank, entry) tblist.append(tbline) return '\n'.join(tblist) # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/DMDA.pyx0000644000175000001440000004537712711377604017065 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class DMDAStencilType(object): STAR = DMDA_STENCIL_STAR BOX = DMDA_STENCIL_BOX class DMDAInterpolationType(object): Q0 = DMDA_INTERPOLATION_Q0 Q1 = DMDA_INTERPOLATION_Q1 class DMDAElementType(object): P1 = DMDA_ELEMENT_P1 Q1 = DMDA_ELEMENT_Q1 # -------------------------------------------------------------------- cdef class DMDA(DM): StencilType = DMDAStencilType InterpolationType = DMDAInterpolationType ElementType = DMDAElementType # def create(self, dim=None, dof=None, sizes=None, proc_sizes=None, boundary_type=None, stencil_type=None, stencil_width=None, bint setup=True, ownership_ranges=None, comm=None): # cdef object arg = None try: arg = tuple(dim) except TypeError: pass else: dim, sizes = None, arg # cdef PetscInt ndim = PETSC_DECIDE cdef PetscInt ndof = PETSC_DECIDE cdef PetscInt M = 1, m = PETSC_DECIDE, *lx = NULL cdef PetscInt N = 1, n = PETSC_DECIDE, *ly = NULL cdef PetscInt P = 1, p = PETSC_DECIDE, *lz = NULL cdef PetscDMBoundaryType btx = DM_BOUNDARY_NONE cdef PetscDMBoundaryType bty = DM_BOUNDARY_NONE cdef PetscDMBoundaryType btz = DM_BOUNDARY_NONE cdef PetscDMDAStencilType stype = DMDA_STENCIL_BOX cdef PetscInt swidth = PETSC_DECIDE # grid and proc sizes cdef object gsizes = sizes cdef object psizes = proc_sizes cdef PetscInt gdim = PETSC_DECIDE cdef PetscInt pdim = PETSC_DECIDE if sizes is not None: gdim = asDims(gsizes, &M, &N, &P) if psizes is not None: pdim = asDims(psizes, &m, &n, &p) if gdim>=0 and pdim>=0: assert gdim == pdim # dim and dof if dim is not None: ndim = asInt(dim) if dof is not None: ndof = asInt(dof) if ndim==PETSC_DECIDE: ndim = gdim if ndof==PETSC_DECIDE: ndof = 1 # vertex distribution if ownership_ranges is not None: ownership_ranges = asOwnershipRanges(ownership_ranges, ndim, &m, &n, &p, &lx, &ly, &lz) # periodicity, stencil type & width if boundary_type is not None: asBoundary(boundary_type, &btx, &bty, &btz) if stencil_type is not None: stype = asStencil(stencil_type) if stencil_width is not None: swidth = asInt(stencil_width) if setup and swidth == PETSC_DECIDE: swidth = 0 # create the DMDA object cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscDM newda = NULL CHKERR( DMDACreateND(ccomm, ndim, ndof, M, N, P, m, n, p, lx, ly, lz, btx, bty, btz, stype, swidth, &newda) ) if setup and ndim > 0: CHKERR( DMSetUp(newda) ) PetscCLEAR(self.obj); self.dm = newda return self def duplicate(self, dof=None, boundary_type=None, stencil_type=None, stencil_width=None): cdef PetscInt ndim = 0, ndof = 0 cdef PetscInt M = 1, N = 1, P = 1 cdef PetscInt m = 1, n = 1, p = 1 cdef PetscDMBoundaryType btx = DM_BOUNDARY_NONE cdef PetscDMBoundaryType bty = DM_BOUNDARY_NONE cdef PetscDMBoundaryType btz = DM_BOUNDARY_NONE cdef PetscDMDAStencilType stype = DMDA_STENCIL_BOX cdef PetscInt swidth = PETSC_DECIDE CHKERR( DMDAGetInfo(self.dm, &ndim, &M, &N, &P, &m, &n, &p, &ndof, &swidth, &btx, &bty, &btz, &stype) ) cdef const_PetscInt *lx = NULL, *ly = NULL, *lz = NULL CHKERR( DMDAGetOwnershipRanges(self.dm, &lx, &ly, &lz) ) cdef MPI_Comm comm = MPI_COMM_NULL CHKERR( PetscObjectGetComm(self.dm, &comm) ) # if dof is not None: ndof = asInt(dof) if boundary_type is not None: asBoundary(boundary_type, &btx, &bty, &btz) if stencil_type is not None: stype = asStencil(stencil_type) if stencil_width is not None: swidth = asInt(stencil_width) # cdef DMDA da = DMDA() CHKERR( DMDACreateND(comm, ndim, ndof, M, N, P, m, n, p, lx, ly, lz, btx, bty, btz, stype, swidth, &da.dm) ) CHKERR( DMSetUp(da.dm) ) return da # def setDim(self, dim): return self.setDimension(dim) def getDim(self): return self.getDimension() def setDof(self, dof): cdef PetscInt ndof = asInt(dof) CHKERR( DMDASetDof(self.dm, ndof) ) def getDof(self): cdef PetscInt dof = 0 CHKERR( DMDAGetInfo(self.dm, NULL, NULL, NULL, NULL, NULL, NULL, NULL, &dof, NULL, NULL, NULL, NULL, NULL) ) return toInt(dof) def setSizes(self, sizes): cdef tuple gsizes = tuple(sizes) cdef PetscInt gdim = PETSC_DECIDE cdef PetscInt M = 1 cdef PetscInt N = 1 cdef PetscInt P = 1 gdim = asDims(gsizes, &M, &N, &P) cdef PetscInt dim = PETSC_DECIDE CHKERR( DMDAGetDim(self.dm, &dim) ) if dim == PETSC_DECIDE: CHKERR( DMSetDimension(self.dm, gdim) ) CHKERR( DMDASetSizes(self.dm, M, N, P) ) def getSizes(self): cdef PetscInt dim = 0 cdef PetscInt M = PETSC_DECIDE cdef PetscInt N = PETSC_DECIDE cdef PetscInt P = PETSC_DECIDE CHKERR( DMDAGetInfo(self.dm, &dim, &M, &N, &P, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL) ) return toDims(dim, M, N, P) def setProcSizes(self, proc_sizes): cdef tuple psizes = tuple(proc_sizes) cdef PetscInt pdim = PETSC_DECIDE cdef PetscInt m = PETSC_DECIDE cdef PetscInt n = PETSC_DECIDE cdef PetscInt p = PETSC_DECIDE pdim = asDims(psizes, &m, &n, &p) cdef PetscInt dim = PETSC_DECIDE CHKERR( DMDAGetDim(self.dm, &dim) ) if dim == PETSC_DECIDE: CHKERR( DMSetDimension(self.dm, pdim) ) CHKERR( DMDASetNumProcs(self.dm, m, n, p) ) def getProcSizes(self): cdef PetscInt dim = 0 cdef PetscInt m = PETSC_DECIDE cdef PetscInt n = PETSC_DECIDE cdef PetscInt p = PETSC_DECIDE CHKERR( DMDAGetInfo(self.dm, &dim, NULL, NULL, NULL, &m, &n, &p, NULL, NULL, NULL, NULL, NULL, NULL) ) return toDims(dim, m, n, p) def setBoundaryType(self, boundary_type): cdef PetscDMBoundaryType btx = DM_BOUNDARY_NONE cdef PetscDMBoundaryType bty = DM_BOUNDARY_NONE cdef PetscDMBoundaryType btz = DM_BOUNDARY_NONE asBoundary(boundary_type, &btx, &bty, &btz) CHKERR( DMDASetBoundaryType(self.dm, btx, bty, btz) ) def getBoundaryType(self): cdef PetscInt dim = 0 cdef PetscDMBoundaryType btx = DM_BOUNDARY_NONE cdef PetscDMBoundaryType bty = DM_BOUNDARY_NONE cdef PetscDMBoundaryType btz = DM_BOUNDARY_NONE CHKERR( DMDAGetInfo(self.dm, &dim, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, &btx, &bty, &btz, NULL) ) return toDims(dim, btx, bty, btz) def setStencilType(self, stencil_type): cdef PetscDMDAStencilType stype = asStencil(stencil_type) CHKERR( DMDASetStencilType(self.dm, stype) ) def getStencilType(self): cdef PetscDMDAStencilType stype = DMDA_STENCIL_BOX CHKERR( DMDAGetInfo(self.dm, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, &stype) ) return stype def setStencilWidth(self, stencil_width): cdef PetscInt swidth = asInt(stencil_width) CHKERR( DMDASetStencilWidth(self.dm, swidth) ) def getStencilWidth(self): cdef PetscInt swidth = 0 CHKERR( DMDAGetInfo(self.dm, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, &swidth, NULL, NULL, NULL, NULL) ) return toInt(swidth) def setStencil(self, stencil_type, stencil_width): cdef PetscDMDAStencilType stype = asStencil(stencil_type) cdef PetscInt swidth = asInt(stencil_width) CHKERR( DMDASetStencilType(self.dm, stype) ) CHKERR( DMDASetStencilWidth(self.dm, swidth) ) def getStencil(self): cdef PetscDMDAStencilType stype = DMDA_STENCIL_BOX cdef PetscInt swidth = 0 CHKERR( DMDAGetInfo(self.dm, NULL, NULL, NULL, NULL, NULL, NULL, NULL, NULL, &swidth, NULL, NULL, NULL, &stype) ) return (toStencil(stype), toInt(swidth)) # def getRanges(self): cdef PetscInt dim=0, x=0, y=0, z=0, m=0, n=0, p=0 CHKERR( DMDAGetDim(self.dm, &dim) ) CHKERR( DMDAGetCorners(self.dm, &x, &y, &z, &m, &n, &p) ) return ((toInt(x), toInt(x+m)), (toInt(y), toInt(y+n)), (toInt(z), toInt(z+p)))[:dim] def getGhostRanges(self): cdef PetscInt dim=0, x=0, y=0, z=0, m=0, n=0, p=0 CHKERR( DMDAGetDim(self.dm, &dim) ) CHKERR( DMDAGetGhostCorners(self.dm, &x, &y, &z, &m, &n, &p) ) return ((toInt(x), toInt(x+m)), (toInt(y), toInt(y+n)), (toInt(z), toInt(z+p)))[:dim] def getOwnershipRanges(self): cdef PetscInt dim=0, m=0, n=0, p=0 cdef const_PetscInt *lx = NULL, *ly = NULL, *lz = NULL CHKERR( DMDAGetInfo(self.dm, &dim, NULL, NULL, NULL, &m, &n, &p, NULL, NULL, NULL, NULL, NULL, NULL) ) CHKERR( DMDAGetOwnershipRanges(self.dm, &lx, &ly, &lz) ) return toOwnershipRanges(dim, m, n, p, lx, ly, lz) def getCorners(self): cdef PetscInt dim=0, x=0, y=0, z=0, m=0, n=0, p=0 CHKERR( DMDAGetDim(self.dm, &dim) ) CHKERR( DMDAGetCorners(self.dm, &x, &y, &z, &m, &n, &p) ) return ((toInt(x), toInt(y), toInt(z))[:dim], (toInt(m), toInt(n), toInt(p))[:dim]) def getGhostCorners(self): cdef PetscInt dim=0, x=0, y=0, z=0, m=0, n=0, p=0 CHKERR( DMDAGetDim(self.dm, &dim) ) CHKERR( DMDAGetGhostCorners(self.dm, &x, &y, &z, &m, &n, &p) ) return ((toInt(x), toInt(y), toInt(z))[:dim], (toInt(m), toInt(n), toInt(p))[:dim]) # def setFieldName(self, field, name): cdef PetscInt ival = asInt(field) cdef const_char *cval = NULL name = str2bytes(name, &cval) CHKERR( DMDASetFieldName(self.dm, ival, cval) ) def getFieldName(self, field): cdef PetscInt ival = asInt(field) cdef const_char *cval = NULL CHKERR( DMDAGetFieldName(self.dm, ival, &cval) ) return bytes2str(cval) # def getVecArray(self, Vec vec not None): return _DMDA_Vec_array(self, vec) # def setUniformCoordinates(self, xmin=0, xmax=1, ymin=0, ymax=1, zmin=0, zmax=1): cdef PetscReal _xmin = asReal(xmin), _xmax = asReal(xmax) cdef PetscReal _ymin = asReal(ymin), _ymax = asReal(ymax) cdef PetscReal _zmin = asReal(zmin), _zmax = asReal(zmax) CHKERR( DMDASetUniformCoordinates(self.dm, _xmin, _xmax, _ymin, _ymax, _zmin, _zmax) ) def setCoordinateName(self, index, name): cdef PetscInt ival = asInt(index) cdef const_char *cval = NULL name = str2bytes(name, &cval) CHKERR( DMDASetCoordinateName(self.dm, ival, cval) ) def getCoordinateName(self, index): cdef PetscInt ival = asInt(index) cdef const_char *cval = NULL CHKERR( DMDAGetCoordinateName(self.dm, ival, &cval) ) return bytes2str(cval) def getBoundingBox(self): cdef PetscInt i,dim=0 CHKERR( DMDAGetDim(self.dm, &dim) ) cdef PetscReal gmin[3], gmax[3] CHKERR( DMDAGetBoundingBox(self.dm, gmin, gmax) ) return tuple([(toReal(gmin[i]), toReal(gmax[i])) for i from 0 <= i < dim]) def getLocalBoundingBox(self): cdef PetscInt i,dim=0 CHKERR( DMDAGetDim(self.dm, &dim) ) cdef PetscReal lmin[3], lmax[3] CHKERR( DMDAGetLocalBoundingBox(self.dm, lmin, lmax) ) return tuple([(toReal(lmin[i]), toReal(lmax[i])) for i from 0 <= i < dim]) # def createNaturalVec(self): cdef Vec vn = Vec() CHKERR( DMDACreateNaturalVector(self.dm, &vn.vec) ) return vn def globalToNatural(self, Vec vg not None, Vec vn not None, addv=None): cdef PetscInsertMode im = insertmode(addv) CHKERR( DMDAGlobalToNaturalBegin(self.dm, vg.vec, im, vn.vec) ) CHKERR( DMDAGlobalToNaturalEnd (self.dm, vg.vec, im, vn.vec) ) def naturalToGlobal(self, Vec vn not None, Vec vg not None, addv=None): cdef PetscInsertMode im = insertmode(addv) CHKERR( DMDANaturalToGlobalBegin(self.dm, vn.vec, im, vg.vec) ) CHKERR( DMDANaturalToGlobalEnd (self.dm, vn.vec, im, vg.vec) ) # def getAO(self): cdef AO ao = AO() CHKERR( DMDAGetAO(self.dm, &ao.ao) ) PetscINCREF(ao.obj) return ao def getScatter(self): cdef Scatter l2g = Scatter() cdef Scatter g2l = Scatter() CHKERR( DMDAGetScatter(self.dm, &l2g.sct, &g2l.sct) ) PetscINCREF(l2g.obj) PetscINCREF(g2l.obj) return (l2g, g2l) # def setRefinementFactor(self, refine_x=2, refine_y=2, refine_z=2): cdef PetscInt refine[3] refine[0] = asInt(refine_x) refine[1] = asInt(refine_y) refine[2] = asInt(refine_z) CHKERR( DMDASetRefinementFactor(self.dm, refine[0], refine[1], refine[2]) ) def getRefinementFactor(self): cdef PetscInt i, dim = 0, refine[3] CHKERR( DMDAGetDim(self.dm, &dim) ) CHKERR( DMDAGetRefinementFactor(self.dm, &refine[0], &refine[1], &refine[2]) ) return tuple([toInt(refine[i]) for 0 <= i < dim]) def setInterpolationType(self, interp_type): cdef PetscDMDAInterpolationType ival = dainterpolationtype(interp_type) CHKERR( DMDASetInterpolationType(self.dm, ival) ) def getInterpolationType(self): cdef PetscDMDAInterpolationType ival = DMDA_INTERPOLATION_Q0 CHKERR( DMDAGetInterpolationType(self.dm, &ival) ) return ival # def setElementType(self, elem_type): cdef PetscDMDAElementType ival = daelementtype(elem_type) CHKERR( DMDASetElementType(self.dm, ival) ) def getElementType(self): cdef PetscDMDAElementType ival = DMDA_ELEMENT_Q1 CHKERR( DMDAGetElementType(self.dm, &ival) ) return ival def getElements(self, elem_type=None): cdef PetscInt dim=0 cdef PetscDMDAElementType etype cdef PetscInt nel=0, nen=0 cdef const_PetscInt *elems=NULL cdef object elements CHKERR( DMDAGetDim(self.dm, &dim) ) if elem_type is not None: etype = daelementtype(elem_type) CHKERR( DMDASetElementType(self.dm, etype) ) try: CHKERR( DMDAGetElements(self.dm, &nel, &nen, &elems) ) elements = array_i(nel*nen, elems) elements.shape = (toInt(nel), toInt(nen)) finally: CHKERR( DMDARestoreElements(self.dm, &nel, &nen, &elems) ) return elements # property dim: def __get__(self): return self.getDim() property dof: def __get__(self): return self.getDof() property sizes: def __get__(self): return self.getSizes() property proc_sizes: def __get__(self): return self.getProcSizes() property boundary_type: def __get__(self): return self.getBoundaryType() property stencil: def __get__(self): return self.getStencil() property stencil_type: def __get__(self): return self.getStencilType() property stencil_width: def __get__(self): return self.getStencilWidth() property ranges: def __get__(self): return self.getRanges() property ghost_ranges: def __get__(self): return self.getGhostRanges() property corners: def __get__(self): return self.getCorners() property ghost_corners: def __get__(self): return self.getGhostCorners() # backward compatibility createNaturalVector = createNaturalVec # backward compatibility alias DA = DMDA # -------------------------------------------------------------------- del DMDAStencilType del DMDAInterpolationType del DMDAElementType # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/Vec.pyx0000644000175000001440000007137412711377604017071 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class VecType(object): SEQ = S_(VECSEQ) MPI = S_(VECMPI) STANDARD = S_(VECSTANDARD) SHARED = S_(VECSHARED) SEQCUSP = S_(VECSEQCUSP) MPICUSP = S_(VECMPICUSP) CUSP = S_(VECCUSP) SEQVIENNACL= S_(VECSEQVIENNACL) MPIVIENNACL= S_(VECMPIVIENNACL) VIENNACL = S_(VECVIENNACL) SEQCUSP = S_(VECSEQCUDA) MPICUSP = S_(VECMPICUDA) CUSP = S_(VECCUDA) NEST = S_(VECNEST) class VecOption(object): IGNORE_OFF_PROC_ENTRIES = VEC_IGNORE_OFF_PROC_ENTRIES IGNORE_NEGATIVE_INDICES = VEC_IGNORE_NEGATIVE_INDICES # -------------------------------------------------------------------- cdef class Vec(Object): Type = VecType Option = VecOption # def __cinit__(self): self.obj = &self.vec self.vec = NULL # unary operations def __pos__(self): return vec_pos(self) def __neg__(self): return vec_neg(self) def __abs__(self): return vec_abs(self) # inplace binary operations def __iadd__(self, other): return vec_iadd(self, other) def __isub__(self, other): return vec_isub(self, other) def __imul__(self, other): return vec_imul(self, other) def __idiv__(self, other): return vec_idiv(self, other) def __itruediv__(self, other): return vec_idiv(self, other) # binary operations def __add__(self, other): if isinstance(self, Vec): return vec_add(self, other) else: return vec_radd(other, self) def __sub__(self, other): if isinstance(self, Vec): return vec_sub(self, other) else: return vec_rsub(other, self) def __mul__(self, other): if isinstance(self, Vec): return vec_mul(self, other) else: return vec_rmul(other, self) def __div__(self, other): if isinstance(self, Vec): return vec_div(self, other) else: return vec_rdiv(other, self) def __truediv__(self, other): if isinstance(self, Vec): return vec_div(self, other) else: return vec_rdiv(other, self) # #def __len__(self): # cdef PetscInt size = 0 # CHKERR( VecGetSize(self.vec, &size) ) # return size def __getitem__(self, i): return vec_getitem(self, i) def __setitem__(self, i, v): vec_setitem(self, i, v) # buffer interface (PEP 3118) def __getbuffer__(self, Py_buffer *view, int flags): cdef _Vec_buffer buf = _Vec_buffer(self) buf.acquirebuffer(view, flags) def __releasebuffer__(self, Py_buffer *view): cdef _Vec_buffer buf = <_Vec_buffer>(view.obj) buf.releasebuffer(view) self # unused # 'with' statement (PEP 343) def __enter__(self): cdef _Vec_buffer buf = _Vec_buffer(self) self.set_attr('__buffer__', buf) return buf.enter() def __exit__(self, *exc): cdef _Vec_buffer buf = self.get_attr('__buffer__') self.set_attr('__buffer__', None) return buf.exit() # def view(self, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( VecView(self.vec, vwr) ) def destroy(self): CHKERR( VecDestroy(&self.vec) ) return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscVec newvec = NULL CHKERR( VecCreate(ccomm, &newvec) ) PetscCLEAR(self.obj); self.vec = newvec return self def setType(self, vec_type): cdef PetscVecType cval = NULL vec_type = str2bytes(vec_type, &cval) CHKERR( VecSetType(self.vec, cval) ) def setSizes(self, size, bsize=None): cdef PetscInt bs=0, n=0, N=0 Vec_Sizes(size, bsize, &bs, &n, &N) CHKERR( VecSetSizes(self.vec, n, N) ) if bs != PETSC_DECIDE: CHKERR( VecSetBlockSize(self.vec, bs) ) # def createSeq(self, size, bsize=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_SELF) cdef PetscInt bs=0, n=0, N=0 Vec_Sizes(size, bsize, &bs, &n, &N) Sys_Layout(ccomm, bs, &n, &N) if bs == PETSC_DECIDE: bs = 1 cdef PetscVec newvec = NULL CHKERR( VecCreate(ccomm,&newvec) ) CHKERR( VecSetSizes(newvec, n, N) ) CHKERR( VecSetBlockSize(newvec, bs) ) CHKERR( VecSetType(newvec, VECSEQ) ) PetscCLEAR(self.obj); self.vec = newvec return self def createMPI(self, size, bsize=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscInt bs=0, n=0, N=0 Vec_Sizes(size, bsize, &bs, &n, &N) Sys_Layout(ccomm, bs, &n, &N) if bs == PETSC_DECIDE: bs = 1 cdef PetscVec newvec = NULL CHKERR( VecCreate(ccomm, &newvec) ) CHKERR( VecSetSizes(newvec, n, N) ) CHKERR( VecSetBlockSize(newvec, bs) ) CHKERR( VecSetType(newvec, VECMPI) ) PetscCLEAR(self.obj); self.vec = newvec return self def createWithArray(self, array, size=None, bsize=None, comm=None): cdef PetscInt na=0 cdef PetscScalar *sa=NULL array = iarray_s(array, &na, &sa) if size is None: size = (toInt(na), toInt(PETSC_DECIDE)) cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscInt bs=0, n=0, N=0 Vec_Sizes(size, bsize, &bs, &n, &N) Sys_Layout(ccomm, bs, &n, &N) if bs == PETSC_DECIDE: bs = 1 if na < n: raise ValueError( "array size %d and vector local size %d block size %d" % (toInt(na), toInt(n), toInt(bs))) cdef PetscVec newvec = NULL if comm_size(ccomm) == 1: CHKERR( VecCreateSeqWithArray(ccomm,bs,N,sa,&newvec) ) else: CHKERR( VecCreateMPIWithArray(ccomm,bs,n,N,sa,&newvec) ) PetscCLEAR(self.obj); self.vec = newvec self.set_attr('__array__', array) return self def createGhost(self, ghosts, size, bsize=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscInt ng=0, *ig=NULL ghosts = iarray_i(ghosts, &ng, &ig) cdef PetscInt bs=0, n=0, N=0 Vec_Sizes(size, bsize, &bs, &n, &N) Sys_Layout(ccomm, bs, &n, &N) cdef PetscVec newvec = NULL if bs == PETSC_DECIDE: CHKERR( VecCreateGhost( ccomm, n, N, ng, ig, &newvec) ) else: CHKERR( VecCreateGhostBlock( ccomm, bs, n, N, ng, ig, &newvec) ) PetscCLEAR(self.obj); self.vec = newvec return self def createGhostWithArray(self, ghosts, array, size=None, bsize=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscInt ng=0, *ig=NULL ghosts = iarray_i(ghosts, &ng, &ig) cdef PetscInt na=0 cdef PetscScalar *sa=NULL array = oarray_s(array, &na, &sa) cdef PetscInt b = 1 if bsize is None else asInt(bsize) if size is None: size = (toInt(na-ng*b), toInt(PETSC_DECIDE)) cdef PetscInt bs=0, n=0, N=0 Vec_Sizes(size, bsize, &bs, &n, &N) Sys_Layout(ccomm, bs, &n, &N) if na < (n+ng*b): raise ValueError( "ghosts size %d, array size %d, and " "vector local size %d block size %d" % (toInt(ng), toInt(na), toInt(n), toInt(b))) cdef PetscVec newvec = NULL if bs == PETSC_DECIDE: CHKERR( VecCreateGhostWithArray( ccomm, n, N, ng, ig, sa, &newvec) ) else: CHKERR( VecCreateGhostBlockWithArray( ccomm, bs, n, N, ng, ig, sa, &newvec) ) PetscCLEAR(self.obj); self.vec = newvec self.set_attr('__array__', array) return self def createShared(self, size, bsize=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscInt bs=0, n=0, N=0 Vec_Sizes(size, bsize, &bs, &n, &N) Sys_Layout(ccomm, bs, &n, &N) cdef PetscVec newvec = NULL CHKERR( VecCreateShared(ccomm, n, N, &newvec) ) PetscCLEAR(self.obj); self.vec = newvec if bs != PETSC_DECIDE: CHKERR( VecSetBlockSize(self.vec, bs) ) return self def createNest(self, vecs, isets=None, comm=None): vecs = list(vecs) if isets: isets = list(isets) assert len(isets) == len(vecs) else: isets = None cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef Py_ssize_t i, m = len(vecs) cdef PetscInt n = m cdef PetscVec *cvecs = NULL cdef PetscIS *cisets = NULL cdef object tmp1, tmp2 tmp1 = oarray_p(empty_p(n), NULL, &cvecs) for i from 0 <= i < m: cvecs[i] = (vecs[i]).vec if isets is not None: tmp2 = oarray_p(empty_p(n), NULL, &cisets) for i from 0 <= i < m: cisets[i] = (isets[i]).iset cdef PetscVec newvec = NULL CHKERR( VecCreateNest(ccomm, n, cisets, cvecs,&newvec) ) PetscCLEAR(self.obj); self.vec = newvec return self # def setOptionsPrefix(self, prefix): cdef const_char *cval = NULL prefix = str2bytes(prefix, &cval) CHKERR( VecSetOptionsPrefix(self.vec, cval) ) def getOptionsPrefix(self): cdef const_char *cval = NULL CHKERR( VecGetOptionsPrefix(self.vec, &cval) ) return bytes2str(cval) def setFromOptions(self): CHKERR( VecSetFromOptions(self.vec) ) def setUp(self): CHKERR( VecSetUp(self.vec) ) return self def setOption(self, option, flag): CHKERR( VecSetOption(self.vec, option, flag) ) def getType(self): cdef PetscVecType cval = NULL CHKERR( VecGetType(self.vec, &cval) ) return bytes2str(cval) def getSize(self): cdef PetscInt N = 0 CHKERR( VecGetSize(self.vec, &N) ) return toInt(N) def getLocalSize(self): cdef PetscInt n = 0 CHKERR( VecGetLocalSize(self.vec, &n) ) return toInt(n) def getSizes(self): cdef PetscInt n = 0, N = 0 CHKERR( VecGetLocalSize(self.vec, &n) ) CHKERR( VecGetSize(self.vec, &N) ) return (toInt(n), toInt(N)) def setBlockSize(self, bsize): cdef PetscInt bs = asInt(bsize) CHKERR( VecSetBlockSize(self.vec, bs) ) def getBlockSize(self): cdef PetscInt bs=0 CHKERR( VecGetBlockSize(self.vec, &bs) ) return toInt(bs) def getOwnershipRange(self): cdef PetscInt low=0, high=0 CHKERR( VecGetOwnershipRange(self.vec, &low, &high) ) return (toInt(low), toInt(high)) def getOwnershipRanges(self): cdef const_PetscInt *rng = NULL CHKERR( VecGetOwnershipRanges(self.vec, &rng) ) cdef MPI_Comm comm = MPI_COMM_NULL CHKERR( PetscObjectGetComm(self.vec, &comm) ) cdef int size = -1 CHKERR( MPI_Comm_size(comm, &size) ) return array_i(size+1, rng) def getBuffer(self, readonly=False): if readonly: return vec_getbuffer_r(self) else: return vec_getbuffer_w(self) def getArray(self, readonly=False): if readonly: return vec_getarray_r(self) else: return vec_getarray_w(self) def setArray(self, array): vec_setarray(self, array) def placeArray(self, array): cdef PetscInt nv=0 cdef PetscInt na=0 cdef PetscScalar *a = NULL CHKERR( VecGetLocalSize(self.vec, &nv) ) array = oarray_s(array, &na, &a) if (na != nv): raise ValueError( "cannot place input array size %d, vector size %d" % (toInt(na), toInt(nv))) CHKERR( VecPlaceArray(self.vec, a) ) self.set_attr('__placed_array__', array) def resetArray(self, force=False): cdef object array = None array = self.get_attr('__placed_array__') if array is None and not force: return None CHKERR( VecResetArray(self.vec) ) self.set_attr('__placed_array__', None) return array def getCUDAHandle(self, mode=None): cdef PetscScalar *hdl = NULL cdef const_char *m = NULL if mode is not None: mode = str2bytes(mode, &m) if m == NULL or (m[0] == c'r' and m[1] == c'w'): CHKERR( VecCUSPGetCUDAArrayReadWrite(self.vec, &hdl) ) elif m[0] == c'r': CHKERR( VecCUSPGetCUDAArrayRead(self.vec, &hdl) ) elif m[0] == c'w': CHKERR( VecCUSPGetCUDAArrayWrite(self.vec, &hdl) ) else: raise ValueError("Invalid mode: expected 'rw', 'r', or 'w'") return hdl def restoreCUDAHandle(self, handle, mode='rw'): cdef PetscScalar *hdl = (handle) cdef const_char *m = NULL if mode is not None: mode = str2bytes(mode, &m) if m == NULL or (m[0] == c'r' and m[1] == c'w'): CHKERR( VecCUSPRestoreCUDAArrayReadWrite(self.vec, &hdl) ) elif m[0] == c'r': CHKERR( VecCUSPRestoreCUDAArrayRead(self.vec, &hdl) ) elif m[0] == c'w': CHKERR( VecCUSPRestoreCUDAArrayWrite(self.vec, &hdl) ) else: raise ValueError("Invalid mode: expected 'rw', 'r', or 'w'") def duplicate(self, array=None): cdef Vec vec = type(self)() CHKERR( VecDuplicate(self.vec, &vec.vec) ) if array is not None: vec_setarray(vec, array) return vec def copy(self, Vec result=None): if result is None: result = type(self)() if result.vec == NULL: CHKERR( VecDuplicate(self.vec, &result.vec) ) CHKERR( VecCopy(self.vec, result.vec) ) return result def chop(self, tol): cdef PetscReal rval = asReal(tol) CHKERR( VecChop(self.vec, rval) ) def load(self, Viewer viewer not None): cdef MPI_Comm comm = MPI_COMM_NULL cdef PetscObject obj = (viewer.vwr) if self.vec == NULL: CHKERR( PetscObjectGetComm(obj, &comm) ) CHKERR( VecCreate(comm, &self.vec) ) CHKERR( VecLoad(self.vec, viewer.vwr) ) return self def equal(self, Vec vec not None): cdef PetscBool flag = PETSC_FALSE CHKERR( VecEqual(self.vec, vec.vec, &flag) ) return flag def dot(self, Vec vec not None): cdef PetscScalar sval = 0 CHKERR( VecDot(self.vec, vec.vec, &sval) ) return toScalar(sval) def dotBegin(self, Vec vec not None): cdef PetscScalar sval = 0 CHKERR( VecDotBegin(self.vec, vec.vec, &sval) ) def dotEnd(self, Vec vec not None): cdef PetscScalar sval = 0 CHKERR( VecDotEnd(self.vec, vec.vec, &sval) ) return toScalar(sval) def tDot(self, Vec vec not None): cdef PetscScalar sval = 0 CHKERR( VecTDot(self.vec, vec.vec, &sval) ) return toScalar(sval) def tDotBegin(self, Vec vec not None): cdef PetscScalar sval = 0 CHKERR( VecTDotBegin(self.vec, vec.vec, &sval) ) def tDotEnd(self, Vec vec not None): cdef PetscScalar sval = 0 CHKERR( VecTDotEnd(self.vec, vec.vec, &sval) ) return toScalar(sval) def mDot(self, vecs, out=None): self; vecs; out; # unused raise NotImplementedError def mDotBegin(self, vecs, out=None): self; vecs; out; # unused raise NotImplementedError def mDotEnd(self, vecs, out=None): self; vecs; out; # unused raise NotImplementedError def mtDot(self, vecs, out=None): self; vecs; out; # unused raise NotImplementedError def mtDotBegin(self, vecs, out=None): self; vecs; out; # unused raise NotImplementedError def mtDotEnd(self, vecs, out=None): self; vecs; out; # unused raise NotImplementedError def norm(self, norm_type=None): cdef PetscNormType norm_1_2 = PETSC_NORM_1_AND_2 cdef PetscNormType ntype = PETSC_NORM_2 if norm_type is not None: ntype = norm_type cdef PetscReal rval[2] CHKERR( VecNorm(self.vec, ntype, rval) ) if ntype != norm_1_2: return toReal(rval[0]) else: return (toReal(rval[0]), toReal(rval[1])) def normBegin(self, norm_type=None): cdef PetscNormType ntype = PETSC_NORM_2 if norm_type is not None: ntype = norm_type cdef PetscReal dummy[2] CHKERR( VecNormBegin(self.vec, ntype, dummy) ) def normEnd(self, norm_type=None): cdef PetscNormType norm_1_2 = PETSC_NORM_1_AND_2 cdef PetscNormType ntype = PETSC_NORM_2 if norm_type is not None: ntype = norm_type cdef PetscReal rval[2] CHKERR( VecNormEnd(self.vec, ntype, rval) ) if ntype != norm_1_2: return toReal(rval[0]) else: return (toReal(rval[0]), toReal(rval[1])) def sum(self): cdef PetscScalar sval = 0 CHKERR( VecSum(self.vec, &sval) ) return toScalar(sval) def min(self): cdef PetscInt ival = 0 cdef PetscReal rval = 0 CHKERR( VecMin(self.vec, &ival, &rval) ) return (toInt(ival), toReal(rval)) def max(self): cdef PetscInt ival = 0 cdef PetscReal rval = 0 CHKERR( VecMax(self.vec, &ival, &rval) ) return (toInt(ival), toReal(rval)) def normalize(self): cdef PetscReal rval = 0 CHKERR( VecNormalize(self.vec, &rval) ) return toReal(rval) def reciprocal(self): CHKERR( VecReciprocal(self.vec) ) def exp(self): CHKERR( VecExp(self.vec) ) def log(self): CHKERR( VecLog(self.vec) ) def sqrtabs(self): CHKERR( VecSqrtAbs(self.vec) ) def abs(self): CHKERR( VecAbs(self.vec) ) def conjugate(self): CHKERR( VecConjugate(self.vec) ) def setRandom(self, Random random=None): cdef PetscRandom rnd = NULL if random is not None: rnd = random.rnd CHKERR( VecSetRandom(self.vec, rnd) ) def permute(self, IS order not None, invert=False): cdef PetscBool cinvert = PETSC_FALSE if invert: cinvert = PETSC_TRUE CHKERR( VecPermute(self.vec, order.iset, cinvert) ) def zeroEntries(self): CHKERR( VecZeroEntries(self.vec) ) def set(self, alpha): cdef PetscScalar sval = asScalar(alpha) CHKERR( VecSet(self.vec, sval) ) def isset(self, IS idx not None, alpha): cdef PetscScalar aval = asScalar(alpha) CHKERR( VecISSet(self.vec, idx.iset, aval) ) def scale(self, alpha): cdef PetscScalar sval = asScalar(alpha) CHKERR( VecScale(self.vec, sval) ) def shift(self, alpha): cdef PetscScalar sval = asScalar(alpha) CHKERR( VecShift(self.vec, sval) ) def chop(self, tol): cdef PetscReal rval = asReal(tol) CHKERR( VecChop(self.vec, rval) ) def swap(self, Vec vec not None): CHKERR( VecSwap(self.vec, vec.vec) ) def axpy(self, alpha, Vec x not None): cdef PetscScalar sval = asScalar(alpha) CHKERR( VecAXPY(self.vec, sval, x.vec) ) def isaxpy(self, IS idx not None, alpha, Vec x not None): cdef PetscScalar sval = asScalar(alpha) CHKERR( VecISAXPY(self.vec, idx.iset, sval, x.vec) ) def aypx(self, alpha, Vec x not None): cdef PetscScalar sval = asScalar(alpha) CHKERR( VecAYPX(self.vec, sval, x.vec) ) def axpby(self, alpha, beta, Vec y not None): cdef PetscScalar sval1 = asScalar(alpha) cdef PetscScalar sval2 = asScalar(beta) CHKERR( VecAXPBY(self.vec, sval1, sval2, y.vec) ) def waxpy(self, alpha, Vec x not None, Vec y not None): cdef PetscScalar sval = asScalar(alpha) CHKERR( VecWAXPY(self.vec, sval, x.vec, y.vec) ) def maxpy(self, alphas, vecs): cdef PetscInt n = 0 cdef PetscScalar *a = NULL cdef PetscVec *v = NULL cdef object tmp1 = iarray_s(alphas, &n, &a) cdef object tmp2 = oarray_p(empty_p(n),NULL, &v) assert n == len(vecs) cdef Py_ssize_t i=0 for i from 0 <= i < n: v[i] = ((vecs[i])).vec CHKERR( VecMAXPY(self.vec, n, a, v) ) def pointwiseMult(self, Vec x not None, Vec y not None): CHKERR( VecPointwiseMult(self.vec, x.vec, y.vec) ) def pointwiseDivide(self, Vec x not None, Vec y not None): CHKERR( VecPointwiseDivide(self.vec, x.vec, y.vec) ) def pointwiseMin(self, Vec x not None, Vec y not None): CHKERR( VecPointwiseMin(self.vec, x.vec, y.vec) ) def pointwiseMax(self, Vec x not None, Vec y not None): CHKERR( VecPointwiseMax(self.vec, x.vec, y.vec) ) def pointwiseMaxAbs(self, Vec x not None, Vec y not None): CHKERR( VecPointwiseMaxAbs(self.vec, x.vec, y.vec) ) def maxPointwiseDivide(self, Vec vec not None): cdef PetscReal rval = 0 CHKERR( VecMaxPointwiseDivide(self.vec, vec.vec, &rval) ) return toReal(rval) def getValue(self, index): cdef PetscInt ival = asInt(index) cdef PetscScalar sval = 0 CHKERR( VecGetValues(self.vec, 1, &ival, &sval) ) return toScalar(sval) def getValues(self, indices, values=None): return vecgetvalues(self.vec, indices, values) def setValue(self, index, value, addv=None): cdef PetscInt ival = asInt(index) cdef PetscScalar sval = asScalar(value) cdef PetscInsertMode caddv = insertmode(addv) CHKERR( VecSetValues(self.vec, 1, &ival, &sval, caddv) ) def setValues(self, indices, values, addv=None): vecsetvalues(self.vec, indices, values, addv, 0, 0) def setValuesBlocked(self, indices, values, addv=None): vecsetvalues(self.vec, indices, values, addv, 1, 0) def setLGMap(self, LGMap lgmap not None): CHKERR( VecSetLocalToGlobalMapping(self.vec, lgmap.lgm) ) def setValueLocal(self, index, value, addv=None): cdef PetscInt ival = asInt(index) cdef PetscScalar sval = asScalar(value) cdef PetscInsertMode caddv = insertmode(addv) CHKERR( VecSetValuesLocal(self.vec, 1, &ival, &sval, caddv) ) def setValuesLocal(self, indices, values, addv=None): vecsetvalues(self.vec, indices, values, addv, 0, 1) def setValuesBlockedLocal(self, indices, values, addv=None): vecsetvalues(self.vec, indices, values, addv, 1, 1) def assemblyBegin(self): CHKERR( VecAssemblyBegin(self.vec) ) def assemblyEnd(self): CHKERR( VecAssemblyEnd(self.vec) ) def assemble(self): CHKERR( VecAssemblyBegin(self.vec) ) CHKERR( VecAssemblyEnd(self.vec) ) # --- methods for strided vectors --- def strideScale(self, field, alpha): cdef PetscInt ival = asInt(field) cdef PetscScalar sval = asScalar(alpha) CHKERR( VecStrideScale(self.vec, ival, sval) ) def strideSum(self, field): cdef PetscInt ival = asInt(field) cdef PetscScalar sval = 0 CHKERR( VecStrideSum(self.vec, ival, &sval) ) return toScalar(sval) def strideMin(self, field): cdef PetscInt ival1 = asInt(field) cdef PetscInt ival2 = 0 cdef PetscReal rval = 0 CHKERR( VecStrideMin(self.vec, ival1, &ival2, &rval) ) return (toInt(ival2), toReal(rval)) def strideMax(self, field): cdef PetscInt ival1 = asInt(field) cdef PetscInt ival2 = 0 cdef PetscReal rval = 0 CHKERR( VecStrideMax(self.vec, ival1, &ival2, &rval) ) return (toInt(ival2), toReal(rval)) def strideNorm(self, field, norm_type=None): cdef PetscInt ival = asInt(field) cdef PetscNormType norm_1_2 = PETSC_NORM_1_AND_2 cdef PetscNormType ntype = PETSC_NORM_2 if norm_type is not None: ntype = norm_type cdef PetscReal rval[2] CHKERR( VecStrideNorm(self.vec, ival, ntype, rval) ) if ntype != norm_1_2: return toReal(rval[0]) else: return (toReal(rval[0]), toReal(rval[1])) def strideScatter(self, field, Vec vec not None, addv=None): cdef PetscInt ival = asInt(field) cdef PetscInsertMode caddv = insertmode(addv) CHKERR( VecStrideScatter(self.vec, ival, vec.vec, caddv) ) def strideGather(self, field, Vec vec not None, addv=None): cdef PetscInt ival = asInt(field) cdef PetscInsertMode caddv = insertmode(addv) CHKERR( VecStrideGather(self.vec, ival, vec.vec, caddv) ) # --- methods for vectors with ghost values --- def localForm(self): """ Intended for use in context manager:: with vec.localForm() as lf: use(lf) """ return _Vec_LocalForm(self) def ghostUpdateBegin(self, addv=None, mode=None): cdef PetscInsertMode caddv = insertmode(addv) cdef PetscScatterMode csctm = scattermode(mode) CHKERR( VecGhostUpdateBegin(self.vec, caddv, csctm) ) def ghostUpdateEnd(self, addv=None, mode=None): cdef PetscInsertMode caddv = insertmode(addv) cdef PetscScatterMode csctm = scattermode(mode) CHKERR( VecGhostUpdateEnd(self.vec, caddv, csctm) ) def ghostUpdate(self, addv=None, mode=None): cdef PetscInsertMode caddv = insertmode(addv) cdef PetscScatterMode csctm = scattermode(mode) CHKERR( VecGhostUpdateBegin(self.vec, caddv, csctm) ) CHKERR( VecGhostUpdateEnd(self.vec, caddv, csctm) ) def setMPIGhost(self, ghosts): "Alternative to createGhost()" cdef PetscInt ng=0, *ig=NULL ghosts = iarray_i(ghosts, &ng, &ig) CHKERR( VecMPISetGhost(self.vec, ng, ig) ) # def getSubVector(self, IS iset not None, Vec subvec=None): if subvec is None: subvec = Vec() else: CHKERR( VecDestroy(&subvec.vec) ) CHKERR( VecGetSubVector(self.vec, iset.iset, &subvec.vec) ) return subvec def restoreSubVector(self, IS iset not None, Vec subvec not None): CHKERR( VecRestoreSubVector(self.vec, iset.iset, &subvec.vec) ) def getNestSubVecs(self): cdef PetscInt N=0 cdef PetscVec* sx=NULL CHKERR( VecNestGetSubVecs(self.vec, &N, &sx) ) output = [] for i in range(N): pyvec = Vec() pyvec.vec = sx[i] CHKERR( PetscObjectReference( pyvec.vec) ) output.append(pyvec) return output def setNestSubVecs(self, sx, idxm=None): if idxm is None: idxm = range(len(sx)) else: assert len(idxm) == len(sx) cdef PetscInt N = 0 cdef PetscInt* cidxm = NULL idxm = iarray_i(idxm, &N, &cidxm) cdef PetscVec* csx = NULL tmp = oarray_p(empty_p(N), NULL, &csx) for i from 0 <= i < N: csx[i] = (sx[i]).vec CHKERR( VecNestSetSubVecs(self.vec, N, cidxm, csx) ) # property sizes: def __get__(self): return self.getSizes() def __set__(self, value): self.setSizes(value) property size: def __get__(self): return self.getSize() property local_size: def __get__(self): return self.getLocalSize() property block_size: def __get__(self): return self.getBlockSize() property owner_range: def __get__(self): return self.getOwnershipRange() property owner_ranges: def __get__(self): return self.getOwnershipRanges() property buffer_w: "Vec buffer (writable)" def __get__(self): return self.getBuffer() property buffer_r: "Vec buffer (read-only)" def __get__(self): return self.getBuffer(True) property array_w: "Vec array (writable)" def __get__(self): return self.getArray() def __set__(self, value): cdef buf = self.getBuffer() with buf as array: array[:] = value property array_r: "Vec array (read-only)" def __get__(self): return self.getArray(True) property buffer: def __get__(self): return self.buffer_w property array: def __get__(self): return self.array_w def __set__(self, value): self.array_w = value # --- NumPy array interface (legacy) --- property __array_interface__: def __get__(self): cdef buf = self.getBuffer() return buf.__array_interface__ # -------------------------------------------------------------------- del VecType del VecOption # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/petscdmcomposite.pxi0000644000175000001440000000420112711377604021677 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from * nogil: int DMCompositeCreate(MPI_Comm,PetscDM*) int DMCompositeAddDM(PetscDM,PetscDM) int DMCompositeGetNumberDM(PetscDM,PetscInt*) int DMCompositeScatterArray(PetscDM,PetscVec,PetscVec*) int DMCompositeGatherArray(PetscDM,PetscVec,PetscInsertMode,PetscVec*) int DMCompositeGetEntriesArray(PetscDM,PetscDM*) int DMCompositeGetAccessArray(PetscDM,PetscVec,PetscInt,const_PetscInt*,PetscVec*) int DMCompositeRestoreAccessArray(PetscDM,PetscVec,PetscInt,const_PetscInt*,PetscVec*) int DMCompositeGetGlobalISs(PetscDM,PetscIS**) int DMCompositeGetLocalISs(PetscDM,PetscIS**) int DMCompositeGetISLocalToGlobalMappings(PetscDM,PetscLGMap**) cdef class _DMComposite_access: cdef PetscDM dm cdef PetscVec gvec cdef PetscInt nlocs cdef PetscInt *locs cdef PetscVec *vecs cdef object locs_mem cdef object vecs_mem cdef object access def __cinit__(self, DM dm, Vec gvec not None, locs=None): self.dm = dm.dm CHKERR( PetscINCREF(&self.dm) ) self.gvec = gvec.vec CHKERR( PetscINCREF(&self.gvec) ) if locs is None: CHKERR( DMCompositeGetNumberDM(self.dm, &self.nlocs) ) locs = arange(0, self.nlocs, 1) self.locs_mem = iarray_i(locs, &self.nlocs, &self.locs) self.vecs_mem = oarray_p(empty_p(self.nlocs), NULL, &self.vecs) self.access = None def __dealloc__(self): CHKERR( DMDestroy(&self.dm) ) CHKERR( VecDestroy(&self.gvec) ) def __enter__(self): cdef Py_ssize_t i, n = self.nlocs CHKERR( DMCompositeGetAccessArray(self.dm, self.gvec, self.nlocs, self.locs, self.vecs) ) self.access = [ref_Vec(self.vecs[i]) for i from 0 <= i < n] return tuple(self.access) def __exit__(self, *exc): cdef Py_ssize_t i, n = self.nlocs for i from 0 <= i < n: (self.access[i]).vec = NULL CHKERR( DMCompositeRestoreAccessArray(self.dm, self.gvec, self.nlocs, self.locs, self.vecs) ) self.access = None petsc4py-3.7.0/src/PETSc/petscdm.pxi0000644000175000001440000001374412711377604017770 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- cdef extern from * nogil: ctypedef char* PetscDMType "const char*" PetscDMType DMDA_type "DMDA" PetscDMType DMCOMPOSITE PetscDMType DMSLICED PetscDMType DMSHELL PetscDMType DMMESH PetscDMType DMPLEX PetscDMType DMCARTESIAN PetscDMType DMREDUNDANT PetscDMType DMPATCH PetscDMType DMMOAB PetscDMType DMNETWORK ctypedef enum PetscDMBoundaryType"DMBoundaryType": DM_BOUNDARY_NONE DM_BOUNDARY_GHOSTED DM_BOUNDARY_MIRROR DM_BOUNDARY_PERIODIC DM_BOUNDARY_TWIST struct _n_DMLabel ctypedef _n_DMLabel* PetscDMLabel "DMLabel" int DMCreate(MPI_Comm,PetscDM*) int DMClone(PetscDM,PetscDM*) int DMDestroy(PetscDM*) int DMView(PetscDM,PetscViewer) int DMSetType(PetscDM,PetscDMType) int DMGetType(PetscDM,PetscDMType*) int DMGetDimension(PetscDM,PetscInt*) int DMSetDimension(PetscDM,PetscInt) int DMSetOptionsPrefix(PetscDM,char[]) int DMSetFromOptions(PetscDM) int DMSetUp(PetscDM) int DMGetBlockSize(PetscDM,PetscInt*) int DMSetVecType(PetscDM,PetscVecType) int DMCreateLocalVector(PetscDM,PetscVec*) int DMCreateGlobalVector(PetscDM,PetscVec*) int DMSetMatType(PetscDM,PetscMatType) int DMCreateMatrix(PetscDM,PetscMat*) int DMGetCoordinateDM(PetscDM,PetscDM*) int DMGetCoordinateSection(PetscDM,PetscSection*) int DMSetCoordinates(PetscDM,PetscVec) int DMGetCoordinates(PetscDM,PetscVec*) int DMSetCoordinatesLocal(PetscDM,PetscVec) int DMGetCoordinatesLocal(PetscDM,PetscVec*) int DMCreateInterpolation(PetscDM,PetscDM,PetscMat*,PetscVec*) int DMCreateInjection(PetscDM,PetscDM,PetscMat*) int DMCreateAggregates(PetscDM,PetscDM,PetscMat*) int DMConvert(PetscDM,PetscDMType,PetscDM*) int DMRefine(PetscDM,MPI_Comm,PetscDM*) int DMCoarsen(PetscDM,MPI_Comm,PetscDM*) int DMRefineHierarchy(PetscDM,PetscInt,PetscDM[]) int DMCoarsenHierarchy(PetscDM,PetscInt,PetscDM[]) int DMGlobalToLocalBegin(PetscDM,PetscVec,PetscInsertMode,PetscVec) int DMGlobalToLocalEnd(PetscDM,PetscVec,PetscInsertMode,PetscVec) int DMLocalToGlobalBegin(PetscDM,PetscVec,PetscInsertMode,PetscVec) int DMLocalToGlobalEnd(PetscDM,PetscVec,PetscInsertMode,PetscVec) int DMLocalToLocalBegin(PetscDM,PetscVec,PetscInsertMode,PetscVec) int DMLocalToLocalEnd(PetscDM,PetscVec,PetscInsertMode,PetscVec) int DMGetLocalToGlobalMapping(PetscDM,PetscLGMap*) int DMSetDefaultSection(PetscDM,PetscSection) int DMGetDefaultSection(PetscDM,PetscSection*) int DMSetDefaultGlobalSection(PetscDM,PetscSection) int DMGetDefaultGlobalSection(PetscDM,PetscSection*) int DMCreateDefaultSF(PetscDM,PetscSection,PetscSection) int DMGetDefaultSF(PetscDM,PetscSF*) int DMSetDefaultSF(PetscDM,PetscSF) int DMGetPointSF(PetscDM,PetscSF*) int DMSetPointSF(PetscDM,PetscSF) int DMCreateLabel(PetscDM,const_char[]) int DMGetLabelValue(PetscDM,const_char[],PetscInt,PetscInt*) int DMSetLabelValue(PetscDM,const_char[],PetscInt,PetscInt) int DMHasLabel(PetscDM,const_char[],PetscBool*) int DMClearLabelValue(PetscDM,const_char[],PetscInt,PetscInt) int DMGetLabelSize(PetscDM,const_char[],PetscInt*) int DMGetLabelIdIS(PetscDM,const_char[],PetscIS*) int DMGetStratumSize(PetscDM,const_char[],PetscInt,PetscInt*) int DMGetStratumIS(PetscDM,const_char[],PetscInt,PetscIS*) int DMClearLabelStratum(PetscDM,const_char[],PetscInt) int DMSetLabelOutput(PetscDM,const_char[],PetscBool) int DMGetLabelOutput(PetscDM,const_char[],PetscBool*) int DMGetNumLabels(PetscDM,PetscInt*) int DMGetLabelName(PetscDM,PetscInt,const_char**) int DMHasLabel(PetscDM,const_char[],PetscBool*) int DMGetLabel(PetscDM,const_char*,PetscDMLabel*) int DMAddLabel(PetscDM,PetscDMLabel) int DMRemoveLabel(PetscDM,const_char[],PetscDMLabel*) #int DMCopyLabels(PetscDM,PetscDM) int DMShellSetGlobalVector(PetscDM,PetscVec) int DMShellSetLocalVector(PetscDM,PetscVec) # -------------------------------------------------------------------- cdef inline PetscDMBoundaryType asBoundaryType(object boundary) \ except (-1): if boundary is None: return DM_BOUNDARY_NONE if isinstance(boundary, str): if boundary == 'none': return DM_BOUNDARY_NONE elif boundary == 'ghosted': return DM_BOUNDARY_GHOSTED elif boundary == 'mirror': return DM_BOUNDARY_MIRROR elif boundary == 'periodic': return DM_BOUNDARY_PERIODIC elif boundary == 'twist': return DM_BOUNDARY_TWIST else: raise ValueError("unknown boundary type: %s" % boundary) return boundary cdef inline PetscInt asBoundary(object boundary, PetscDMBoundaryType *_x, PetscDMBoundaryType *_y, PetscDMBoundaryType *_z) except? -1: cdef PetscInt dim = PETSC_DECIDE cdef object x=None, y=None, z=None if (boundary is None or isinstance(boundary, str) or isinstance(boundary, int)): _x[0] = _y[0] = _z[0] = asBoundaryType(boundary) else: boundary = tuple(boundary) dim = len(boundary) if dim == 0: pass elif dim == 1: (x,) = boundary elif dim == 2: (x, y) = boundary elif dim == 3: (x, y, z) = boundary if dim >= 1: _x[0] = asBoundaryType(x) if dim >= 2: _y[0] = asBoundaryType(y) if dim >= 3: _z[0] = asBoundaryType(z) return dim cdef inline object toBoundary(PetscInt dim, PetscDMBoundaryType x, PetscDMBoundaryType y, PetscDMBoundaryType z): if dim == 0: return () elif dim == 1: return (x,) elif dim == 2: return (x, y) elif dim == 3: return (x, y, z) # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/IS.pyx0000644000175000001440000004271012711377604016657 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class ISType(object): GENERAL = S_(ISGENERAL) BLOCK = S_(ISBLOCK) STRIDE = S_(ISSTRIDE) # -------------------------------------------------------------------- cdef class IS(Object): Type = ISType # def __cinit__(self): self.obj = &self.iset self.iset = NULL # buffer interface (PEP 3118) def __getbuffer__(self, Py_buffer *view, int flags): cdef _IS_buffer buf = _IS_buffer(self) buf.acquirebuffer(view, flags) def __releasebuffer__(self, Py_buffer *view): cdef _IS_buffer buf = <_IS_buffer>(view.obj) buf.releasebuffer(view) self # unused # 'with' statement (PEP 343) def __enter__(self): cdef _IS_buffer buf = _IS_buffer(self) self.set_attr('__buffer__', buf) return buf.enter() def __exit__(self, *exc): cdef _IS_buffer buf = self.get_attr('__buffer__') self.set_attr('__buffer__', None) return buf.exit() # def view(self, Viewer viewer=None): cdef PetscViewer cviewer = NULL if viewer is not None: cviewer = viewer.vwr CHKERR( ISView(self.iset, cviewer) ) def destroy(self): CHKERR( ISDestroy(&self.iset) ) return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscIS newiset = NULL CHKERR( ISCreate(ccomm, &newiset) ) PetscCLEAR(self.obj); self.iset = newiset return self def setType(self, is_type): cdef PetscISType cval = NULL is_type = str2bytes(is_type, &cval) CHKERR( ISSetType(self.iset, cval) ) def getType(self): cdef PetscISType cval = NULL CHKERR( ISGetType(self.iset, &cval) ) return bytes2str(cval) def createGeneral(self, indices, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscInt nidx = 0, *idx = NULL cdef PetscCopyMode cm = PETSC_COPY_VALUES cdef PetscIS newiset = NULL indices = iarray_i(indices, &nidx, &idx) CHKERR( ISCreateGeneral(ccomm, nidx, idx, cm, &newiset) ) PetscCLEAR(self.obj); self.iset = newiset return self def createBlock(self, bsize, indices, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscInt bs = asInt(bsize) cdef PetscInt nidx = 0, *idx = NULL cdef PetscCopyMode cm = PETSC_COPY_VALUES cdef PetscIS newiset = NULL indices = iarray_i(indices, &nidx, &idx) CHKERR( ISCreateBlock(ccomm, bs, nidx, idx, cm, &newiset) ) PetscCLEAR(self.obj); self.iset = newiset return self def createStride(self, size, first=0, step=0, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscInt csize = asInt(size) cdef PetscInt cfirst = asInt(first) cdef PetscInt cstep = asInt(step) cdef PetscIS newiset = NULL CHKERR( ISCreateStride(ccomm, csize, cfirst, cstep, &newiset) ) PetscCLEAR(self.obj); self.iset = newiset return self def duplicate(self): cdef IS iset = type(self)() CHKERR( ISDuplicate(self.iset, &iset.iset) ) return iset def copy(self, IS result=None): if result is None: result = type(self)() if result.iset == NULL: CHKERR( ISDuplicate(self.iset, &result.iset) ) CHKERR( ISCopy(self.iset, result.iset) ) return result def load(self, Viewer viewer not None): cdef MPI_Comm comm = MPI_COMM_NULL cdef PetscObject obj = (viewer.vwr) if self.iset == NULL: CHKERR( PetscObjectGetComm(obj, &comm) ) CHKERR( ISCreate(comm, &self.iset) ) CHKERR( ISLoad(self.iset, viewer.vwr) ) return self def allGather(self): cdef IS iset = IS() CHKERR( ISAllGather(self.iset, &iset.iset) ) return iset def toGeneral(self): CHKERR( ISToGeneral(self.iset) ) return self def invertPermutation(self, nlocal=None): cdef PetscInt cnlocal = PETSC_DECIDE if nlocal is not None: cnlocal = asInt(nlocal) cdef IS iset = IS() CHKERR( ISInvertPermutation(self.iset, cnlocal, &iset.iset) ) return iset def getSize(self): cdef PetscInt N = 0 CHKERR( ISGetSize(self.iset, &N) ) return toInt(N) def getLocalSize(self): cdef PetscInt n = 0 CHKERR( ISGetLocalSize(self.iset, &n) ) return toInt(n) def getSizes(self): cdef PetscInt n = 0, N = 0 CHKERR( ISGetLocalSize(self.iset, &n) ) CHKERR( ISGetSize(self.iset, &N) ) return (toInt(n), toInt(N)) def getBlockSize(self): cdef PetscInt bs = 1 CHKERR( ISGetBlockSize(self.iset, &bs) ) return toInt(bs) def setBlockSize(self, bs): cdef PetscInt cbs = asInt(bs) CHKERR( ISSetBlockSize(self.iset, cbs) ) def sort(self): CHKERR( ISSort(self.iset) ) return self def isSorted(self): cdef PetscBool flag = PETSC_FALSE CHKERR( ISSorted(self.iset, &flag) ) return flag def setPermutation(self): CHKERR( ISSetPermutation(self.iset) ) return self def isPermutation(self): cdef PetscBool flag = PETSC_FALSE CHKERR( ISPermutation(self.iset, &flag) ) return flag def setIdentity(self): CHKERR( ISSetIdentity(self.iset) ) return self def isIdentity(self): cdef PetscBool flag = PETSC_FALSE CHKERR( ISIdentity(self.iset, &flag) ) return flag def equal(self, IS iset not None): cdef PetscBool flag = PETSC_FALSE CHKERR( ISEqual(self.iset, iset.iset, &flag) ) return flag def sum(self, IS iset not None): cdef IS out = IS() CHKERR( ISSum(self.iset, iset.iset, &out.iset) ) return out def expand(self, IS iset not None): cdef IS out = IS() CHKERR( ISExpand(self.iset, iset.iset, &out.iset) ) return out def union(self, IS iset not None): # XXX review this cdef PetscBool flag1=PETSC_FALSE, flag2=PETSC_FALSE CHKERR( ISSorted(self.iset, &flag1) ) CHKERR( ISSorted(iset.iset, &flag2) ) cdef IS out = IS() if flag1==PETSC_TRUE and flag2==PETSC_TRUE: CHKERR( ISSum(self.iset, iset.iset, &out.iset) ) else: CHKERR( ISExpand(self.iset, iset.iset, &out.iset) ) return out def difference(self, IS iset not None): cdef IS out = IS() CHKERR( ISDifference(self.iset, iset.iset, &out.iset) ) return out def complement(self, nmin, nmax): cdef PetscInt cnmin = asInt(nmin) cdef PetscInt cnmax = asInt(nmax) cdef IS out = IS() CHKERR( ISComplement(self.iset, cnmin, cnmax, &out.iset) ) return out def embed(self, IS iset not None, drop): cdef PetscBool bval = drop cdef IS out = IS() CHKERR( ISEmbed(self.iset, iset.iset, bval, &out.iset) ) return out # def setIndices(self, indices): cdef PetscInt nidx = 0, *idx = NULL cdef PetscCopyMode cm = PETSC_COPY_VALUES indices = iarray_i(indices, &nidx, &idx) CHKERR( ISGeneralSetIndices(self.iset, nidx, idx, cm) ) def getIndices(self): cdef PetscInt size = 0 cdef const_PetscInt *indices = NULL CHKERR( ISGetLocalSize(self.iset, &size) ) CHKERR( ISGetIndices(self.iset, &indices) ) cdef object oindices = None try: oindices = array_i(size, indices) finally: CHKERR( ISRestoreIndices(self.iset, &indices) ) return oindices def setBlockIndices(self, bsize, indices): cdef PetscInt bs = asInt(bsize) cdef PetscInt nidx = 0, *idx = NULL cdef PetscCopyMode cm = PETSC_COPY_VALUES indices = iarray_i(indices, &nidx, &idx) CHKERR( ISBlockSetIndices(self.iset, bs, nidx, idx, cm) ) def getBlockIndices(self): cdef PetscInt size = 0, bs = 1 cdef const_PetscInt *indices = NULL CHKERR( ISGetLocalSize(self.iset, &size) ) CHKERR( ISGetBlockSize(self.iset, &bs) ) CHKERR( ISBlockGetIndices(self.iset, &indices) ) cdef object oindices = None try: oindices = array_i(size//bs, indices) finally: CHKERR( ISBlockRestoreIndices(self.iset, &indices) ) return oindices def setStride(self, size, first=0, step=1): cdef PetscInt csize = asInt(size) cdef PetscInt cfirst = asInt(first) cdef PetscInt cstep = asInt(step) CHKERR( ISStrideSetStride(self.iset, csize, cfirst, cstep) ) def getStride(self): cdef PetscInt size=0, first=0, step=0 CHKERR( ISGetLocalSize(self.iset, &size) ) CHKERR( ISStrideGetInfo(self.iset, &first, &step) ) return (toInt(size), toInt(first), toInt(step)) def getInfo(self): cdef PetscInt first = 0, step = 0 CHKERR( ISStrideGetInfo(self.iset, &first, &step) ) return (toInt(first), toInt(step)) # property permutation: def __get__(self): return self.isPermutation() property identity: def __get__(self): return self.isIdentity() property sorted: def __get__(self): return self.isSorted() # property sizes: def __get__(self): return self.getSizes() property size: def __get__(self): return self.getSize() property local_size: def __get__(self): return self.getLocalSize() property block_size: def __get__(self): return self.getBlockSize() property indices: def __get__(self): return self.getIndices() property array: def __get__(self): return asarray(self) # --- NumPy array interface (legacy) --- property __array_interface__: def __get__(self): cdef _IS_buffer buf = _IS_buffer(self) return buf.__array_interface__ # -------------------------------------------------------------------- class GLMapType(object): MASK = PETSC_IS_GTOLM_MASK DROP = PETSC_IS_GTOLM_DROP # -------------------------------------------------------------------- cdef class LGMap(Object): MapType = GLMapType # def __cinit__(self): self.obj = &self.lgm self.lgm = NULL def __call__(self, indices, result=None): self.apply(indices, result) # def view(self, Viewer viewer=None): cdef PetscViewer cviewer = NULL if viewer is not None: cviewer = viewer.vwr CHKERR( ISLocalToGlobalMappingView(self.lgm, cviewer) ) def destroy(self): CHKERR( ISLocalToGlobalMappingDestroy(&self.lgm) ) return self def create(self, indices, bsize=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscInt bs = 1, nidx = 0, *idx = NULL cdef PetscCopyMode cm = PETSC_COPY_VALUES cdef PetscLGMap newlgm = NULL if bsize is not None: bs = asInt(bsize) if bs == PETSC_DECIDE: bs = 1 indices = iarray_i(indices, &nidx, &idx) CHKERR( ISLocalToGlobalMappingCreate( ccomm, bs, nidx, idx, cm, &newlgm) ) PetscCLEAR(self.obj); self.lgm = newlgm return self def createIS(self, IS iset not None): cdef PetscLGMap newlgm = NULL CHKERR( ISLocalToGlobalMappingCreateIS( iset.iset, &newlgm) ) PetscCLEAR(self.obj); self.lgm = newlgm return self def createSF(self, SF sf not None, start): cdef PetscLGMap newlgm = NULL cdef PetscInt cstart = asInt(start) CHKERR( ISLocalToGlobalMappingCreateSF(sf.sf, cstart, &newlgm) ) PetscCLEAR(self.obj); self.lgm = newlgm return self def getSize(self): cdef PetscInt n = 0 CHKERR( ISLocalToGlobalMappingGetSize(self.lgm, &n) ) return toInt(n) def getBlockSize(self): cdef PetscInt bs = 1 CHKERR( ISLocalToGlobalMappingGetBlockSize(self.lgm, &bs) ) return toInt(bs) def getIndices(self): cdef PetscInt size = 0 cdef const_PetscInt *indices = NULL CHKERR( ISLocalToGlobalMappingGetSize( self.lgm, &size) ) CHKERR( ISLocalToGlobalMappingGetIndices( self.lgm, &indices) ) cdef object oindices = None try: oindices = array_i(size, indices) finally: CHKERR( ISLocalToGlobalMappingRestoreIndices( self.lgm, &indices) ) return oindices def getBlockIndices(self): cdef PetscInt size = 0, bs = 1 cdef const_PetscInt *indices = NULL CHKERR( ISLocalToGlobalMappingGetSize( self.lgm, &size) ) CHKERR( ISLocalToGlobalMappingGetBlockSize( self.lgm, &bs) ) CHKERR( ISLocalToGlobalMappingGetBlockIndices( self.lgm, &indices) ) cdef object oindices = None try: oindices = array_i(size//bs, indices) finally: CHKERR( ISLocalToGlobalMappingRestoreBlockIndices( self.lgm, &indices) ) return oindices def getInfo(self): cdef PetscInt i, nproc = 0, *procs = NULL, cdef PetscInt *numprocs = NULL, **indices = NULL cdef object neighs = { } CHKERR( ISLocalToGlobalMappingGetInfo( self.lgm, &nproc, &procs, &numprocs, &indices) ) try: for i from 0 <= i < nproc: neighs[toInt(procs[i])] = array_i(numprocs[i], indices[i]) finally: ISLocalToGlobalMappingRestoreInfo( self.lgm, &nproc, &procs, &numprocs, &indices) return neighs def getBlockInfo(self): cdef PetscInt i, nproc = 0, *procs = NULL, cdef PetscInt *numprocs = NULL, **indices = NULL cdef object neighs = { } CHKERR( ISLocalToGlobalMappingGetBlockInfo( self.lgm, &nproc, &procs, &numprocs, &indices) ) try: for i from 0 <= i < nproc: neighs[toInt(procs[i])] = array_i(numprocs[i], indices[i]) finally: ISLocalToGlobalMappingRestoreBlockInfo( self.lgm, &nproc, &procs, &numprocs, &indices) return neighs # def apply(self, indices, result=None): cdef PetscInt niidx = 0, *iidx = NULL cdef PetscInt noidx = 0, *oidx = NULL indices = iarray_i(indices, &niidx, &iidx) if result is None: result = empty_i(niidx) result = oarray_i(result, &noidx, &oidx) assert niidx == noidx, "incompatible array sizes" CHKERR( ISLocalToGlobalMappingApply( self.lgm, niidx, iidx, oidx) ) return result def applyBlock(self, indices, result=None): cdef PetscInt niidx = 0, *iidx = NULL cdef PetscInt noidx = 0, *oidx = NULL indices = iarray_i(indices, &niidx, &iidx) if result is None: result = empty_i(niidx) result = oarray_i(result, &noidx, &oidx) assert niidx == noidx, "incompatible array sizes" CHKERR( ISLocalToGlobalMappingApplyBlock( self.lgm, niidx, iidx, oidx) ) return result def applyIS(self, IS iset not None): cdef IS result = IS() CHKERR( ISLocalToGlobalMappingApplyIS( self.lgm, iset.iset, &result.iset) ) return result def applyInverse(self, indices, map_type=None): cdef PetscGLMapType cmtype = PETSC_IS_GTOLM_MASK if map_type is not None: cmtype = map_type cdef PetscInt n = 0, *idx = NULL indices = iarray_i(indices, &n, &idx) cdef PetscInt nout = n, *idxout = NULL if cmtype != PETSC_IS_GTOLM_MASK: CHKERR( ISGlobalToLocalMappingApply( self.lgm, cmtype, n, idx, &nout, NULL) ) result = oarray_i(empty_i(nout), &nout, &idxout) CHKERR( ISGlobalToLocalMappingApply( self.lgm, cmtype, n, idx, &nout, idxout) ) return result def applyBlockInverse(self, indices, map_type=None): cdef PetscGLMapType cmtype = PETSC_IS_GTOLM_MASK if map_type is not None: cmtype = map_type cdef PetscInt n = 0, *idx = NULL indices = iarray_i(indices, &n, &idx) cdef PetscInt nout = n, *idxout = NULL if cmtype != PETSC_IS_GTOLM_MASK: CHKERR( ISGlobalToLocalMappingApply( self.lgm, cmtype, n, idx, &nout, NULL) ) result = oarray_i(empty_i(nout), &nout, &idxout) CHKERR( ISGlobalToLocalMappingApplyBlock( self.lgm, cmtype, n, idx, &nout, idxout) ) return result # property size: def __get__(self): return self.getSize() property block_size: def __get__(self): return self.getBlockSize() property indices: def __get__(self): return self.getIndices() property block_indices: def __get__(self): return self.getBlockIndices() property info: def __get__(self): return self.getInfo() property block_info: def __get__(self): return self.getBlockInfo() # -------------------------------------------------------------------- del ISType del GLMapType # -------------------------------------------------------------------- petsc4py-3.7.0/src/PETSc/PC.pyx0000644000175000001440000004536412711377604016656 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- class PCType(object): # native NONE = S_(PCNONE) JACOBI = S_(PCJACOBI) SOR = S_(PCSOR) LU = S_(PCLU) SHELL = S_(PCSHELL) BJACOBI = S_(PCBJACOBI) MG = S_(PCMG) EISENSTAT = S_(PCEISENSTAT) ILU = S_(PCILU) ICC = S_(PCICC) ASM = S_(PCASM) GASM = S_(PCGASM) KSP = S_(PCKSP) COMPOSITE = S_(PCCOMPOSITE) REDUNDANT = S_(PCREDUNDANT) SPAI = S_(PCSPAI) NN = S_(PCNN) CHOLESKY = S_(PCCHOLESKY) PBJACOBI = S_(PCPBJACOBI) MAT = S_(PCMAT) HYPRE = S_(PCHYPRE) PARMS = S_(PCPARMS) FIELDSPLIT = S_(PCFIELDSPLIT) TFS = S_(PCTFS) ML = S_(PCML) GALERKIN = S_(PCGALERKIN) EXOTIC = S_(PCEXOTIC) CP = S_(PCCP) BFBT = S_(PCBFBT) LSC = S_(PCLSC) PYTHON = S_(PCPYTHON) PFMG = S_(PCPFMG) SYSPFMG = S_(PCSYSPFMG) REDISTRIBUTE = S_(PCREDISTRIBUTE) SVD = S_(PCSVD) GAMG = S_(PCGAMG) SACUSP = S_(PCSACUSP) SACUSPPOLY = S_(PCSACUSPPOLY) BICGSTABCUSP = S_(PCBICGSTABCUSP) AINVCUSP = S_(PCAINVCUSP) BDDC = S_(PCBDDC) KACZMARZ = S_(PCKACZMARZ) TELESCOPE = S_(PCTELESCOPE) class PCSide(object): # native LEFT = PC_LEFT RIGHT = PC_RIGHT SYMMETRIC = PC_SYMMETRIC # aliases L = LEFT R = RIGHT S = SYMMETRIC class PCASMType(object): NONE = PC_ASM_NONE BASIC = PC_ASM_BASIC RESTRICT = PC_ASM_RESTRICT INTERPOLATE = PC_ASM_INTERPOLATE class PCGASMType(object): NONE = PC_GASM_NONE BASIC = PC_GASM_BASIC RESTRICT = PC_GASM_RESTRICT INTERPOLATE = PC_GASM_INTERPOLATE class PCMGType(object): MULTIPLICATIVE = PC_MG_MULTIPLICATIVE ADDITIVE = PC_MG_ADDITIVE FULL = PC_MG_FULL KASKADE = PC_MG_KASKADE class PCGAMGType(object): AGG = S_(PCGAMGAGG) GEO = S_(PCGAMGGEO) CLASSICAL = S_(PCGAMGCLASSICAL) class PCCompositeType(object): ADDITIVE = PC_COMPOSITE_ADDITIVE MULTIPLICATIVE = PC_COMPOSITE_MULTIPLICATIVE SYMMETRIC_MULTIPLICATIVE = PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE SPECIAL = PC_COMPOSITE_SPECIAL SCHUR = PC_COMPOSITE_SCHUR class PCFieldSplitSchurPreType(object): SELF = PC_FIELDSPLIT_SCHUR_PRE_SELF SELFP = PC_FIELDSPLIT_SCHUR_PRE_SELFP A11 = PC_FIELDSPLIT_SCHUR_PRE_A11 USER = PC_FIELDSPLIT_SCHUR_PRE_USER FULL = PC_FIELDSPLIT_SCHUR_PRE_FULL class PCFieldSplitSchurFactType(object): DIAG = PC_FIELDSPLIT_SCHUR_FACT_DIAG LOWER = PC_FIELDSPLIT_SCHUR_FACT_LOWER UPPER = PC_FIELDSPLIT_SCHUR_FACT_UPPER FULL = PC_FIELDSPLIT_SCHUR_FACT_FULL # -------------------------------------------------------------------- cdef class PC(Object): Type = PCType Side = PCSide ASMType = PCASMType GASMType = PCGASMType MGType = PCMGType GAMGType = PCGAMGType CompositeType = PCCompositeType SchurFactType = PCFieldSplitSchurFactType SchurPreType = PCFieldSplitSchurPreType # --- xxx --- def __cinit__(self): self.obj = &self.pc self.pc = NULL def __call__(self, x, y=None): if y is None: # XXX do this better y = self.getOperators()[0].createVecLeft() self.apply(x, y) return y # --- xxx --- def view(self, Viewer viewer=None): cdef PetscViewer vwr = NULL if viewer is not None: vwr = viewer.vwr CHKERR( PCView(self.pc, vwr) ) def destroy(self): CHKERR( PCDestroy(&self.pc) ) self.pc = NULL return self def create(self, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscPC newpc = NULL CHKERR( PCCreate(ccomm, &newpc) ) PetscCLEAR(self.obj); self.pc = newpc return self def setType(self, pc_type): cdef PetscPCType cval = NULL pc_type = str2bytes(pc_type, &cval) CHKERR( PCSetType(self.pc, cval) ) def getType(self): cdef PetscPCType cval = NULL CHKERR( PCGetType(self.pc, &cval) ) return bytes2str(cval) def setOptionsPrefix(self, prefix): cdef const_char *cval = NULL prefix = str2bytes(prefix, &cval) CHKERR( PCSetOptionsPrefix(self.pc, cval) ) def getOptionsPrefix(self): cdef const_char *cval = NULL CHKERR( PCGetOptionsPrefix(self.pc, &cval) ) return bytes2str(cval) def setFromOptions(self): CHKERR( PCSetFromOptions(self.pc) ) def setOperators(self, Mat A=None, Mat P=None): cdef PetscMat amat=NULL if A is not None: amat = A.mat cdef PetscMat pmat=amat if P is not None: pmat = P.mat CHKERR( PCSetOperators(self.pc, amat, pmat) ) def getOperators(self): cdef Mat A = Mat(), P = Mat() CHKERR( PCGetOperators(self.pc, &A.mat, &P.mat) ) PetscINCREF(A.obj) PetscINCREF(P.obj) return (A, P) def setUseAmat(self, flag): cdef PetscBool cflag = PETSC_FALSE if flag: cflag = PETSC_TRUE CHKERR( PCSetUseAmat(self.pc, cflag) ) def setUp(self): CHKERR( PCSetUp(self.pc) ) def reset(self): CHKERR( PCReset(self.pc) ) def setUpOnBlocks(self): CHKERR( PCSetUpOnBlocks(self.pc) ) def apply(self, Vec x not None, Vec y not None): CHKERR( PCApply(self.pc, x.vec, y.vec) ) def applyTranspose(self, Vec x not None, Vec y not None): CHKERR( PCApplyTranspose(self.pc, x.vec, y.vec) ) def applySymmetricLeft(self, Vec x not None, Vec y not None): CHKERR( PCApplySymmetricLeft(self.pc, x.vec, y.vec) ) def applySymmetricRight(self, Vec x not None, Vec y not None): CHKERR( PCApplySymmetricRight(self.pc, x.vec, y.vec) ) # --- discretization space --- def getDM(self): cdef PetscDM newdm = NULL CHKERR( PCGetDM(self.pc, &newdm) ) cdef DM dm = subtype_DM(newdm)() dm.dm = newdm PetscINCREF(dm.obj) return dm def setDM(self, DM dm not None): CHKERR( PCSetDM(self.pc, dm.dm) ) def setCoordinates(self, coordinates): cdef ndarray xyz = iarray(coordinates, NPY_PETSC_REAL) if PyArray_ISFORTRAN(xyz): xyz = PyArray_Copy(xyz) if PyArray_NDIM(xyz) != 2: raise ValueError( ("coordinates must have two dimensions: " "coordinates.ndim=%d") % (PyArray_NDIM(xyz)) ) cdef PetscInt nvtx = PyArray_DIM(xyz, 0) cdef PetscInt ndim = PyArray_DIM(xyz, 1) cdef PetscReal *coords = PyArray_DATA(xyz) CHKERR( PCSetCoordinates(self.pc, ndim, nvtx, coords) ) # --- Python --- def createPython(self, context=None, comm=None): cdef MPI_Comm ccomm = def_Comm(comm, PETSC_COMM_DEFAULT) cdef PetscPC newpc = NULL CHKERR( PCCreate(ccomm, &newpc) ) PetscCLEAR(self.obj); self.pc = newpc CHKERR( PCSetType(self.pc, PCPYTHON) ) CHKERR( PCPythonSetContext(self.pc, context) ) return self def setPythonContext(self, context): CHKERR( PCPythonSetContext(self.pc, context) ) def getPythonContext(self): cdef void *context = NULL CHKERR( PCPythonGetContext(self.pc, &context) ) if context == NULL: return None else: return context def setPythonType(self, py_type): cdef const_char *cval = NULL py_type = str2bytes(py_type, &cval) CHKERR( PCPythonSetType(self.pc, cval) ) # --- ASM --- def setASMType(self, asmtype): cdef PetscPCASMType cval = asmtype CHKERR( PCASMSetType(self.pc, cval) ) def setASMOverlap(self, overlap): cdef PetscInt ival = asInt(overlap) CHKERR( PCASMSetOverlap(self.pc, ival) ) def setASMLocalSubdomains(self, nsd): cdef PetscInt n = asInt(nsd) CHKERR( PCASMSetLocalSubdomains(self.pc, n, NULL, NULL) ) def setASMTotalSubdomains(self, nsd): cdef PetscInt N = asInt(nsd) CHKERR( PCASMSetTotalSubdomains(self.pc, N, NULL, NULL) ) def getASMSubKSP(self): cdef PetscInt i = 0, n = 0 cdef PetscKSP *p = NULL CHKERR( PCASMGetSubKSP(self.pc, &n, NULL, &p) ) return [ref_KSP(p[i]) for i from 0 <= i #include #include "libpetsc4py/libpetsc4py.c" petsc4py-3.7.0/src/PETSc.py0000644000175000001440000000020212711377604016142 0ustar dalcinlusers00000000000000ARCH = None from petsc4py.lib import ImportPETSc PETSc = ImportPETSc(ARCH) PETSc._initialize() del PETSc del ImportPETSc del ARCH petsc4py-3.7.0/src/petsc4py.PETSc.pyx0000644000175000001440000000027012711377604020111 0ustar dalcinlusers00000000000000#cython: embedsignature=True #cython: cdivision=True #cython: always_allow_keywords=True #cython: autotestdict=False #cython: warn.multiple_declarators=False include "PETSc/PETSc.pyx" petsc4py-3.7.0/src/libpetsc4py.h0000644000175000001440000000137412711377604017300 0ustar dalcinlusers00000000000000#include /* #include "libpetsc4py/libpetsc4py.h" */ PETSC_EXTERN int import_libpetsc4py(void); PETSC_EXTERN PetscErrorCode MatPythonGetContext(Mat,void**); PETSC_EXTERN PetscErrorCode MatPythonSetContext(Mat,void*); PETSC_EXTERN PetscErrorCode PCPythonGetContext(PC,void**); PETSC_EXTERN PetscErrorCode PCPythonSetContext(PC,void*); PETSC_EXTERN PetscErrorCode KSPPythonGetContext(KSP,void**); PETSC_EXTERN PetscErrorCode KSPPythonSetContext(KSP,void*); PETSC_EXTERN PetscErrorCode SNESPythonGetContext(SNES,void**); PETSC_EXTERN PetscErrorCode SNESPythonSetContext(SNES,void*); PETSC_EXTERN PetscErrorCode TSPythonGetContext(TS,void**); PETSC_EXTERN PetscErrorCode TSPythonSetContext(TS,void*); PETSC_EXTERN PetscErrorCode PetscPythonRegisterAll(void); petsc4py-3.7.0/src/lib/0000755000175000001440000000000012711405164015417 5ustar dalcinlusers00000000000000petsc4py-3.7.0/src/lib/petsc.cfg0000644000175000001440000000006712711377604017230 0ustar dalcinlusers00000000000000PETSC_DIR = %(PETSC_DIR)s PETSC_ARCH = %(PETSC_ARCH)s petsc4py-3.7.0/src/lib/__init__.py0000644000175000001440000001215712711377604017545 0ustar dalcinlusers00000000000000# Author: Lisandro Dalcin # Contact: dalcinl@gmail.com # -------------------------------------------------------------------- """ Extension modules for different PETSc configurations. PETSc can be configured with different options (eg. debug/optimized, single/double precisionm, C/C++ compilers, external packages). Each configuration variant is associated to a name, frequently available as an environmental variable named ``PETSC_ARCH``. This package is a holds all the available variants of the PETSc extension module built agaist specific PETSc configurations. It also provides a convenience function using of the builtin ``imp`` module for easily importing any of the available extension modules depending on the value of a user-provided configuration name, the ``PETSC_ARCH`` environmental variable, or a configuration file. """ # -------------------------------------------------------------------- def ImportPETSc(arch=None): """ Import the PETSc extension module for a given configuration name. """ path, arch = getPathArchPETSc(arch) return Import('petsc4py', 'PETSc', path, arch) def getPathArchPETSc(arch=None): """ Undocumented. """ import sys, os path = os.path.dirname(__file__) rcvar, rcfile = 'PETSC_ARCH', 'petsc.cfg' path, arch = getPathArch(path, arch, rcvar, rcfile) return (path, arch) # -------------------------------------------------------------------- def Import(pkg, name, path, arch): """ Import helper for PETSc-based extension modules. """ import sys, os, imp # full dotted module name fullname = '%s.%s' % (pkg, name) # test if extension module was already imported module = sys.modules.get(fullname) fname = getattr(module, '__file__', '') shext = imp.get_suffixes()[0][0] if os.path.splitext(fname)[-1] == shext: # if 'arch' is None, do nothing; otherwise this # call may be invalid if extension module for # other 'arch' has been already imported. if arch is not None and arch != module.__arch__: raise ImportError("%s already imported" % module) return module # import extension module from 'path/arch' directory pathlist = [os.path.join(path, arch)] fo, fn, stuff = imp.find_module(name, pathlist) module = imp.load_module(fullname, fo, fn, stuff) module.__arch__ = arch # save arch value setattr(sys.modules[pkg], name, module) return module def getPathArch(path, arch, rcvar='PETSC_ARCH', rcfile='petsc.cfg'): """ Undocumented. """ import os, warnings # path if not path: path = '.' elif os.path.isfile(path): path = os.path.dirname(path) elif not os.path.isdir(path): raise ValueError("invalid path: '%s'" % path) # arch if arch is not None: if not isinstance(arch, str): raise TypeError( "arch argument must be string") if not os.path.isdir(os.path.join(path, arch)): raise TypeError("invalid arch value: '%s'" % arch) return (path, arch) # helper function def arch_list(arch): arch = arch.strip().split(os.path.pathsep) arch = [a.strip() for a in arch if a] arch = [a for a in arch if a] return arch # try to get arch from the environment arch_env = arch_list(os.environ.get(rcvar, '')) for arch in arch_env: if os.path.isdir(os.path.join(path, arch)): return (path, arch) # configuration file if not os.path.isfile(rcfile): rcfile = os.path.join(path, rcfile) if not os.path.isfile(rcfile): # now point to continue return (path, '') # helper function def parse_rc(rcfile): with open(rcfile) as f: rcdata = f.read() lines = [ln.strip() for ln in rcdata.splitlines()] lines = [ln for ln in lines if not ln.startswith('#')] entries = [ln.split('=') for ln in lines if ln] entries = [(k.strip(), v.strip()) for k, v in entries] return dict(entries) # try to get arch from data in config file configrc = parse_rc(rcfile) arch_cfg = arch_list(configrc.get(rcvar, '')) for arch in arch_cfg: if os.path.isdir(os.path.join(path, arch)): if arch_env: warnings.warn( "ignored arch: '%s', using: '%s'" % \ (os.path.pathsep.join(arch_env), arch)) return (path, arch) # nothing good found return (path, '') def getInitArgs(args): """ Undocumented. """ import sys, shlex if args is None: args = [] elif isinstance(args, str): args = shlex.split(args) else: args = [str(a) for a in args] args = [a for a in args if a] if args and args[0].startswith('-'): sys_argv = getattr(sys, 'argv', None) sys_exec = getattr(sys, 'executable', 'python') if (sys_argv and sys_argv[0] and sys_argv[0] != '-c'): prog_name = sys_argv[0] else: prog_name = sys_exec args.insert(0, prog_name) return args # -------------------------------------------------------------------- petsc4py-3.7.0/src/__main__.py0000644000175000001440000000417312711377604016757 0ustar dalcinlusers00000000000000# Author: Lisandro Dalcin # Contact: dalcinl@gmail.com """ Command line access to the PETSc Options Database. This module provides command line access to PETSc Options Database. It outputs a listing of the many PETSc options indicating option names, default values and descriptions. Usage:: $ python -m petsc4py [vec|mat|pc|ksp|snes|ts|tao] [] """ def help(args=None): import sys, shlex # program name try: prog = sys.argv[0] except Exception: prog = getattr(sys, 'executable', 'python') # arguments if args is None: args = sys.argv[1:] elif isinstance(args, str): args = shlex.split(args) else: args = [str(a) for a in args] # import and initialize import petsc4py petsc4py.init([prog, '-help'] + args) from petsc4py import PETSc # help dispatcher COMM = PETSc.COMM_SELF if 'vec' in args: vec = PETSc.Vec().create(comm=COMM) vec.setSizes(0) vec.setFromOptions() vec.destroy() if 'mat' in args: mat = PETSc.Mat().create(comm=COMM) mat.setSizes([0, 0]) mat.setFromOptions() mat.destroy() if 'pc' in args: pc = PETSc.PC().create(comm=COMM) pc.setFromOptions() pc.destroy() if 'ksp' in args: ksp = PETSc.KSP().create(comm=COMM) ksp.setFromOptions() ksp.destroy() if 'snes' in args: snes = PETSc.SNES().create(comm=COMM) snes.setFromOptions() snes.destroy() if 'ts' in args: ts = PETSc.TS().create(comm=COMM) ts.setFromOptions() ts.destroy() if 'tao' in args: tao = PETSc.TAO().create(comm=COMM) tao.setFromOptions() tao.destroy() #if 'dm' in args: # dm = PETSc.DM().create(comm=COMM) # dm.setFromOptions() # dm.destroy() if 'dmda' in args: dmda = PETSc.DMDA().create(comm=COMM) dmda.setFromOptions() dmda.destroy() if 'dmplex' in args: dmplex = PETSc.DMPlex().create(comm=COMM) dmplex.setFromOptions() dmplex.destroy() if __name__ == '__main__': help() petsc4py-3.7.0/src/libpetsc4py/0000755000175000001440000000000012711405164017113 5ustar dalcinlusers00000000000000petsc4py-3.7.0/src/libpetsc4py/libpetsc4py.pyx0000644000175000001440000024433412711377604022140 0ustar dalcinlusers00000000000000#cython: cdivision=True #cython: autotestdict=False #cython: warn.multiple_declarators=False cimport cython # ---------- from petsc4py.PETSc cimport * cdef extern from "custom.h": pass # ---------- cdef extern from "Python.h": bint Py_IsInitialized() nogil ctypedef struct PyObject void Py_INCREF(PyObject*) void Py_DECREF(PyObject*) void Py_CLEAR(PyObject*) object PyModule_New(char*) bint PyModule_Check(object) object PyImport_Import(object) # -------------------------------------------------------------------- cdef extern from "custom.h": void initlibpetsc4py() nogil except * cdef public int import_libpetsc4py() nogil except -1: initlibpetsc4py() return 0 # -------------------------------------------------------------------- cdef extern from * nogil: MPI_Comm MPI_COMM_NULL MPI_Comm PETSC_COMM_SELF MPI_Comm PETSC_COMM_WORLD int MPI_Comm_size(MPI_Comm,int*) int MPI_Comm_rank(MPI_Comm,int*) ctypedef int PetscErrorCode enum: PETSC_ERR_SUP enum: PETSC_ERR_USER enum: PETSC_ERROR_INITIAL enum: PETSC_ERROR_REPEAT PetscErrorCode PetscERROR(MPI_Comm,char[],PetscErrorCode,int,char[],char[]) ctypedef enum PetscBool: PETSC_TRUE PETSC_FALSE ctypedef long PetscInt ctypedef double PetscReal ctypedef double PetscScalar PetscReal PetscMin(PetscReal,PetscReal) ctypedef struct _p_PetscObject: MPI_Comm comm char *prefix PetscInt refct ctypedef int PetscClassId PetscErrorCode PetscObjectGetClassId(PetscObject,PetscClassId*) PetscErrorCode PetscObjectGetComm(PetscObject,MPI_Comm*) PetscErrorCode PetscObjectCompose(PetscObject,char[],PetscObject) PetscErrorCode PetscObjectQuery(PetscObject,char[],PetscObject*) PetscErrorCode PetscObjectReference(PetscObject) ctypedef void (*PetscVoidFunction)() PetscErrorCode PetscObjectComposeFunction(PetscObject,char[],void (*ptr)()) PetscErrorCode PetscObjectTypeCompare(PetscObject,char[],PetscBool*) PetscErrorCode PetscObjectChangeTypeName(PetscObject, char[]) ctypedef struct _p_PetscOptionItems ctypedef _p_PetscOptionItems* PetscOptionItems ctypedef struct _n_PetscOptions ctypedef _n_PetscOptions* PetscOptions PetscErrorCode PetscOptionsString(char[],char[],char[],char[],char[],size_t,PetscBool*) PetscErrorCode PetscOptionsGetString(PetscOptions,char[],char[],char[],size_t,PetscBool*) char *PETSCVIEWERASCII char *PETSCVIEWERSTRING PetscErrorCode PetscViewerASCIIPrintf(PetscViewer,char[],...) PetscErrorCode PetscViewerStringSPrintf(PetscViewer,char[],...) cdef inline object toInt(PetscInt value): return value cdef inline PetscInt asInt(object value) except?-1: return value cdef inline object toReal(PetscReal value): return value cdef inline PetscReal asReal(object value) except?-1: return value cdef extern from "scalar.h": object toScalar"PyPetscScalar_FromPetscScalar"(PetscScalar) PetscScalar asScalar"PyPetscScalar_AsPetscScalar"(object) except* # -------------------------------------------------------------------- cdef extern from * nogil: enum: PETSC_ERR_PYTHON cdef extern from * nogil: enum: IERR "PETSC_ERR_PYTHON" cdef char *FUNCT = NULL cdef char *fstack[1024] cdef int istack = 0 cdef inline void FunctionBegin(char name[]) nogil: global FUNCT FUNCT = name global fstack, istack fstack[istack] = FUNCT istack += 1 if istack >= 1024: istack = 0 return cdef inline PetscErrorCode FunctionEnd() nogil: global FUNCT FUNCT = NULL global fstack, istack istack -= 1 if istack < 0: istack = 1024 FUNCT = fstack[istack] return 0 cdef PetscErrorCode PetscSETERR(PetscErrorCode ierr,char msg[]) nogil: global fstack, istack istack = 0; fstack[istack] = NULL; global FUNCT return PetscERROR(PETSC_COMM_SELF,FUNCT,ierr, PETSC_ERROR_INITIAL, msg, NULL) cdef PetscErrorCode PetscCHKERR(PetscErrorCode ierr) nogil: global fstack, istack istack = 0; fstack[istack] = NULL; global FUNCT return PetscERROR(PETSC_COMM_SELF,FUNCT,ierr, PETSC_ERROR_REPEAT, b"", NULL) cdef extern from *: void PyErr_SetObject(object, object) PyObject *PyExc_RuntimeError cdef object PetscError = PyExc_RuntimeError from petsc4py.PETSc import Error as PetscError cdef inline void PythonSETERR(PetscErrorCode ierr) with gil: if (PetscError) != NULL: PyErr_SetObject(PetscError, ierr) else: PyErr_SetObject(PyExc_RuntimeError, ierr) cdef inline int CHKERR(PetscErrorCode ierr) nogil except -1: if ierr == 0: return 0 if ierr == PETSC_ERR_PYTHON: #PetscCHKERR(ierr) return -1 if Py_IsInitialized(): PythonSETERR(ierr) PetscCHKERR(ierr) return -1 cdef PetscErrorCode UNSUPPORTED(char msg[]) nogil: global FUNCT return PetscERROR(PETSC_COMM_SELF,FUNCT,PETSC_ERR_USER, PETSC_ERROR_INITIAL,b"method %s()",msg) # -------------------------------------------------------------------- cdef inline PetscInt getRef(void *pobj) nogil: cdef PetscObject obj = pobj if obj == NULL: return 0 else: return obj.refct cdef inline void addRef(void *pobj) nogil: cdef PetscObject obj = pobj if obj != NULL: obj.refct += 1 cdef inline void delRef(void *pobj) nogil: cdef PetscObject obj = pobj if obj != NULL: obj.refct -= 1 cdef inline PetscObject newRef(void *pobj) nogil: cdef PetscObject obj = pobj cdef int ierr = 0 if obj != NULL: ierr = PetscObjectReference(obj) if ierr: return NULL # XXX warning! return obj cdef inline char* getPrefix(void *pobj) nogil: cdef PetscObject obj = pobj if obj == NULL: return NULL return obj.prefix cdef inline int getCommSize(void *pobj) nogil: cdef PetscObject obj = pobj if obj == NULL: return 0 cdef int size = 0 MPI_Comm_size(obj.comm,&size) return size cdef inline Viewer Viewer_(PetscViewer p): cdef Viewer ob = Viewer.__new__(Viewer) ob.obj[0] = newRef(p) return ob cdef inline IS IS_(PetscIS p): cdef IS ob = IS.__new__(IS) ob.obj[0] = newRef(p) return ob cdef inline Vec Vec_(PetscVec p): cdef Vec ob = Vec.__new__(Vec) ob.obj[0] = newRef(p) return ob cdef inline Mat Mat_(PetscMat p): cdef Mat ob = Mat.__new__(Mat) ob.obj[0] = newRef(p) return ob cdef inline PC PC_(PetscPC p): cdef PC ob = PC.__new__(PC) ob.obj[0] = newRef(p) return ob cdef inline KSP KSP_(PetscKSP p): cdef KSP ob = KSP.__new__(KSP) ob.obj[0] = newRef(p) return ob cdef inline SNES SNES_(PetscSNES p): cdef SNES ob = SNES.__new__(SNES) ob.obj[0] = newRef(p) return ob cdef inline TS TS_(PetscTS p): cdef TS ob = TS.__new__(TS) ob.obj[0] = newRef(p) return ob # -------------------------------------------------------------------- cdef extern from *: ctypedef char const_char "const char" cdef inline object bytes2str(const_char p[]): if p == NULL: return None cdef bytes s = p if not isinstance(s, str): return s.decode() else: return s cdef object parse_url(object url): path, name = url.rsplit(":", 1) return (path, name) cdef dict module_cache = {} cdef object load_module(object path): if path in module_cache: return module_cache[path] module = PyModule_New("__petsc__") module.__file__ = path module.__package__ = None module_cache[path] = module try: source = open(path, 'rU') try: code = compile(source.read(), path, 'exec') finally: source.close() namespace = module.__dict__ exec code in namespace except: del module_cache[path] raise return module # ----------------------------------------------------------------------------- @cython.internal cdef class _PyObj: cdef object self cdef bytes name def __getattr__(self, attr): return getattr(self.self, attr, None) cdef int setcontext(self, void *ctx, Object base) except -1: # if ctx == self.self: return 0 # cdef object destroy = self.destroy if destroy is not None: destroy(base) destroy = None # if ctx == NULL: self.self = None self.name = None return 0 # self.self = ctx self.name = None cdef object create = self.create if create is not None: create(base) create = None return 0 cdef int getcontext(self, void **ctx) except -1: if ctx == NULL: return 0 if self.self is not None: ctx[0] = self.self else: ctx[0] = NULL return 0 cdef int setname(self, char name[]) except -1: if name != NULL and name[0] != 0: self.name = name else: self.name = None return 0 cdef char* getname(self) except? NULL: if self.self is None: return NULL if self.name is not None: return self.name cdef ctx = self.self cdef name = None if PyModule_Check(ctx): name = getattr(ctx, '__name__', None) else: modname = getattr(ctx, '__module__', None) clsname = None cls = getattr(ctx, '__class__', None) if cls: clsname = getattr(cls, '__name__', None) if not modname: modname = getattr(cls, '__module__', None) if modname and clsname: name = modname + '.' + clsname elif clsname: name = clsname elif modname: name = modname if name is not None: self.name = name.encode() if self.name is not None: return self.name return NULL cdef createcontext(char name_p[]): if name_p == NULL: return None cdef name = bytes2str(name_p) cdef mod, path, modname=None cdef cls, attr, clsname=None # path/to/filename.py:{function|class} if ':' in name: path, attr = parse_url(name) mod = load_module(path) if attr: cls = getattr(mod, attr) return cls() else: return mod # package.module[.{function|class}] if '.' in name: modname, clsname = name.rsplit('.', 1) mod = PyImport_Import(modname) if hasattr(mod, clsname): cls = getattr(mod, clsname) if not PyModule_Check(cls): return cls() # package[.module] mod = PyImport_Import(name) return mod cdef int viewcontext(_PyObj ctx, PetscViewer viewer) except -1: cdef PetscBool isascii = PETSC_FALSE, isstring = PETSC_FALSE CHKERR( PetscObjectTypeCompare(viewer, PETSCVIEWERASCII, &isascii) ) CHKERR( PetscObjectTypeCompare(viewer, PETSCVIEWERSTRING, &isstring) ) cdef char *name = ctx.getname() if isascii: if name == NULL: name = b"unknown/no yet set" CHKERR( PetscViewerASCIIPrintf(viewer, b" Python: %s\n", name) ) if isstring: if name == NULL: name = b"" CHKERR( PetscViewerStringSPrintf(viewer,"%s", name) ) return 0 # -------------------------------------------------------------------- cdef extern from * nogil: struct _n_PetscLayout ctypedef _n_PetscLayout* PetscLayout PetscErrorCode PetscLayoutSetLocalSize(PetscLayout,PetscInt) PetscErrorCode PetscLayoutSetSize(PetscLayout,PetscInt) PetscErrorCode PetscLayoutGetBlockSize(PetscLayout,PetscInt*) PetscErrorCode PetscLayoutSetBlockSize(PetscLayout,PetscInt) PetscErrorCode PetscLayoutSetUp(PetscLayout) cdef extern from * nogil: ctypedef enum NormType: NORM_1 NORM_2 ctypedef enum InsertMode: INSERT_VALUES ADD_VALUES PetscErrorCode VecDestroy(PetscVec*) PetscErrorCode VecDuplicate(PetscVec,PetscVec*) PetscErrorCode VecCopy(PetscVec,PetscVec) PetscErrorCode VecSet(PetscVec,PetscScalar) PetscErrorCode VecScale(PetscVec,PetscScalar) PetscErrorCode VecShift(PetscVec,PetscScalar) PetscErrorCode VecAXPY(PetscVec,PetscScalar,PetscVec) PetscErrorCode VecAXPBY(PetscVec,PetscScalar,PetscScalar,PetscVec) PetscErrorCode VecNorm(PetscVec,NormType,PetscReal*) # -------------------------------------------------------------------- cdef extern from * nogil: ctypedef enum MatDuplicateOption: MAT_DO_NOT_COPY_VALUES MAT_COPY_VALUES MAT_SHARE_NONZERO_PATTERN ctypedef enum MatAssemblyType: MAT_FLUSH_ASSEMBLY MAT_FINAL_ASSEMBLY ctypedef enum MatOption: pass ctypedef enum MatStructure: SAME_NONZERO_PATTERN DIFFERENT_NONZERO_PATTERN SUBSET_NONZERO_PATTERN ctypedef enum MatReuse: MAT_IGNORE_MATRIX MAT_INITIAL_MATRIX MAT_REUSE_MATRIX ctypedef enum MatSORType: SOR_FORWARD_SWEEP SOR_BACKWARD_SWEEP SOR_SYMMETRIC_SWEEP SOR_LOCAL_FORWARD_SWEEP SOR_LOCAL_BACKWARD_SWEEP SOR_LOCAL_SYMMETRIC_SWEEP SOR_ZERO_INITIAL_GUESS SOR_EISENSTAT SOR_APPLY_UPPER SOR_APPLY_LOWER cdef extern from * nogil: struct _MatOps: PetscErrorCode (*destroy)(PetscMat) except IERR PetscErrorCode (*setfromoptions)(PetscOptionItems*,PetscMat) except IERR PetscErrorCode (*view)(PetscMat,PetscViewer) except IERR PetscErrorCode (*duplicate)(PetscMat,MatDuplicateOption,PetscMat*) except IERR PetscErrorCode (*copy)(PetscMat,PetscMat,MatStructure) except IERR PetscErrorCode (*getsubmatrix)(PetscMat,PetscIS,PetscIS,MatReuse,PetscMat*) except IERR PetscErrorCode (*setoption)(PetscMat,MatOption,PetscBool) except IERR PetscErrorCode (*setup)(PetscMat) except IERR PetscErrorCode (*assemblybegin)(PetscMat,MatAssemblyType) except IERR PetscErrorCode (*assemblyend)(PetscMat,MatAssemblyType) except IERR PetscErrorCode (*zeroentries)(PetscMat) except IERR PetscErrorCode (*scale)(PetscMat,PetscScalar) except IERR PetscErrorCode (*shift)(PetscMat,PetscScalar) except IERR PetscErrorCode (*sor)(PetscMat,PetscVec,PetscReal,MatSORType,PetscReal,PetscInt,PetscInt,PetscVec) except IERR PetscErrorCode (*getvecs)(PetscMat,PetscVec*,PetscVec*) except IERR PetscErrorCode (*mult)(PetscMat,PetscVec,PetscVec) except IERR PetscErrorCode (*multtranspose)(PetscMat,PetscVec,PetscVec) except IERR PetscErrorCode (*multhermitian"multhermitiantranspose")(PetscMat,PetscVec,PetscVec) except IERR PetscErrorCode (*multadd)(PetscMat,PetscVec,PetscVec,PetscVec) except IERR PetscErrorCode (*multtransposeadd)(PetscMat,PetscVec,PetscVec,PetscVec) except IERR PetscErrorCode (*multhermitianadd"multhermitiantransposeadd")(PetscMat,PetscVec,PetscVec,PetscVec) except IERR PetscErrorCode (*multdiagonalblock)(PetscMat,PetscVec,PetscVec) except IERR PetscErrorCode (*solve)(PetscMat,PetscVec,PetscVec) except IERR PetscErrorCode (*solvetranspose)(PetscMat,PetscVec,PetscVec) except IERR PetscErrorCode (*solveadd)(PetscMat,PetscVec,PetscVec,PetscVec) except IERR PetscErrorCode (*solvetransposeadd)(PetscMat,PetscVec,PetscVec,PetscVec) except IERR PetscErrorCode (*getdiagonal)(PetscMat,PetscVec) except IERR PetscErrorCode (*setdiagonal"diagonalset")(PetscMat,PetscVec,InsertMode) except IERR PetscErrorCode (*diagonalscale)(PetscMat,PetscVec,PetscVec) except IERR PetscErrorCode (*norm)(PetscMat,NormType,PetscReal*) except IERR PetscErrorCode (*realpart)(PetscMat) except IERR PetscErrorCode (*imagpart"imaginarypart")(PetscMat) except IERR PetscErrorCode (*conjugate)(PetscMat) except IERR ctypedef _MatOps *MatOps struct _p_Mat: void *data MatOps ops PetscBool assembled PetscBool preallocated PetscLayout rmap, cmap cdef extern from * nogil: PetscErrorCode MatCreateVecs(PetscMat,PetscVec*,PetscVec*) PetscErrorCode MatIsSymmetricKnown(PetscMat,PetscBool*,PetscBool*) PetscErrorCode MatIsHermitianKnown(PetscMat,PetscBool*,PetscBool*) PetscErrorCode MatMult(PetscMat,PetscVec,PetscVec) PetscErrorCode MatMultTranspose(PetscMat,PetscVec,PetscVec) PetscErrorCode MatMultHermitian"MatMultHermitianTranspose"(PetscMat,PetscVec,PetscVec) PetscErrorCode MatSolve(PetscMat,PetscVec,PetscVec) PetscErrorCode MatSolveTranspose(PetscMat,PetscVec,PetscVec) @cython.internal cdef class _PyMat(_PyObj): pass cdef inline _PyMat PyMat(PetscMat mat): if mat != NULL and mat.data != NULL: return <_PyMat>mat.data else: return _PyMat.__new__(_PyMat) cdef public PetscErrorCode MatPythonGetContext(PetscMat mat, void **ctx) \ except IERR: FunctionBegin(b"MatPythonGetContext") PyMat(mat).getcontext(ctx) return FunctionEnd() cdef public PetscErrorCode MatPythonSetContext(PetscMat mat, void *ctx) \ except IERR: FunctionBegin(b"MatPythonSetContext") PyMat(mat).setcontext(ctx, Mat_(mat)) return FunctionEnd() cdef PetscErrorCode MatPythonSetType_PYTHON(PetscMat mat, char name[]) \ except IERR with gil: FunctionBegin(b"MatPythonSetType_PYTHON") if name == NULL: return FunctionEnd() # XXX cdef object ctx = createcontext(name) MatPythonSetContext(mat, ctx) PyMat(mat).setname(name) return FunctionEnd() cdef PetscErrorCode MatCreate_Python( PetscMat mat, ) \ except IERR with gil: FunctionBegin(b"MatCreate_Python") # cdef MatOps ops = mat.ops ops.destroy = MatDestroy_Python ops.setfromoptions = MatSetFromOptions_Python ops.view = MatView_Python ops.duplicate = MatDuplicate_Python ops.copy = MatCopy_Python ops.getsubmatrix = MatGetSubMatrix_Python ops.setoption = MatSetOption_Python ops.setup = MatSetUp_Python ops.assemblybegin = MatAssemblyBegin_Python ops.assemblyend = MatAssemblyEnd_Python ops.zeroentries = MatZeroEntries_Python ops.scale = MatScale_Python ops.shift = MatShift_Python ops.getvecs = MatCreateVecs_Python ops.mult = MatMult_Python ops.sor = MatSOR_Python ops.multtranspose = MatMultTranspose_Python ops.multhermitian = MatMultHermitian_Python ops.multadd = MatMultAdd_Python ops.multtransposeadd = MatMultTransposeAdd_Python ops.multhermitianadd = MatMultHermitianAdd_Python ops.multdiagonalblock = MatMultDiagonalBlock_Python ops.solve = MatSolve_Python ops.solvetranspose = MatSolveTranspose_Python ops.solveadd = MatSolveAdd_Python ops.solvetransposeadd = MatSolveTransposeAdd_Python ops.getdiagonal = MatGetDiagonal_Python ops.setdiagonal = MatSetDiagonal_Python ops.diagonalscale = MatDiagonalScale_Python ops.norm = MatNorm_Python ops.realpart = MatRealPart_Python ops.imagpart = MatImagPart_Python ops.conjugate = MatConjugate_Python # mat.assembled = PETSC_TRUE # XXX mat.preallocated = PETSC_FALSE # XXX # CHKERR( PetscObjectComposeFunction( mat,b"MatGetDiagonalBlock_C", MatGetDiagonalBlock_Python) ) CHKERR( PetscObjectComposeFunction( mat,b"MatPythonSetType_C", MatPythonSetType_PYTHON) ) CHKERR( PetscObjectChangeTypeName( mat,MATPYTHON) ) # cdef ctx = PyMat(NULL) mat.data = ctx Py_INCREF(mat.data) return FunctionEnd() cdef PetscErrorCode MatDestroy_Python( PetscMat mat, ) \ except IERR with gil: FunctionBegin(b"MatDestroy_Python") CHKERR( PetscObjectComposeFunction( mat,b"MatGetDiagonalBlock_C", NULL) ) CHKERR( PetscObjectComposeFunction( mat,b"MatPythonSetType_C", NULL) ) CHKERR( PetscObjectChangeTypeName( mat,NULL) ) # if not Py_IsInitialized(): return FunctionEnd() try: addRef(mat) MatPythonSetContext(mat, NULL) finally: delRef(mat) Py_DECREF(mat.data) mat.data = NULL return FunctionEnd() cdef PetscErrorCode MatSetFromOptions_Python( PetscOptionItems *PetscOptionsObject, PetscMat mat, ) \ except IERR with gil: FunctionBegin(b"MatSetFromOptions_Python") # cdef char name[2048], *defval = PyMat(mat).getname() cdef PetscBool found = PETSC_FALSE cdef PetscOptionItems *opts "PetscOptionsObject" = PetscOptionsObject CHKERR( PetscOptionsString( b"-mat_python_type",b"Python [package.]module[.{class|function}]", b"MatPythonSetType",defval,name,sizeof(name),&found) ); opts; if found and name[0]: CHKERR( MatPythonSetType_PYTHON(mat,name) ) # cdef setFromOptions = PyMat(mat).setFromOptions if setFromOptions is not None: setFromOptions(Mat_(mat)) return FunctionEnd() cdef PetscErrorCode MatView_Python( PetscMat mat, PetscViewer vwr, ) \ except IERR with gil: FunctionBegin(b"MatView_Python") viewcontext(PyMat(mat), vwr) cdef view = PyMat(mat).view if view is not None: view(Mat_(mat), Viewer_(vwr)) return FunctionEnd() cdef PetscErrorCode MatDuplicate_Python( PetscMat mat, MatDuplicateOption op, PetscMat* out, ) \ except IERR with gil: FunctionBegin(b"MatDuplicate_Python") cdef duplicate = PyMat(mat).duplicate if duplicate is None: return UNSUPPORTED(b"duplicate") cdef Mat m = duplicate(Mat_(mat), op) out[0] = m.mat; m.mat = NULL return FunctionEnd() cdef PetscErrorCode MatCopy_Python( PetscMat mat, PetscMat out, MatStructure op, ) \ except IERR with gil: FunctionBegin(b"MatCopy_Python") cdef copy = PyMat(mat).copy if copy is None: return UNSUPPORTED(b"copy") copy(Mat_(mat), Mat_(out), op) return FunctionEnd() cdef PetscErrorCode MatGetDiagonalBlock_Python( PetscMat mat, PetscMat *out ) \ except IERR with gil: FunctionBegin(b"MatGetDiagonalBlock_Python") cdef getDiagonalBlock = PyMat(mat).getDiagonalBlock if getDiagonalBlock is None: if getCommSize(mat) == 1: out[0] = mat return FunctionEnd() if getDiagonalBlock is None: return UNSUPPORTED(b"getDiagonalBlock") cdef Mat sub = getDiagonalBlock(Mat_(mat)) if sub is not None: out[0] = sub.mat return FunctionEnd() cdef PetscErrorCode MatGetSubMatrix_Python( PetscMat mat, PetscIS row, PetscIS col, MatReuse op, PetscMat *out, ) \ except IERR with gil: FunctionBegin(b"MatCopy_Python") cdef getSubMatrix = PyMat(mat).getSubMatrix if getSubMatrix is None: return UNSUPPORTED(b"getSubMatrix") cdef Mat sub = None if op == MAT_IGNORE_MATRIX: sub = None elif op == MAT_INITIAL_MATRIX: sub = getSubMatrix(Mat_(mat), IS_(row), IS_(col), None) elif op == MAT_REUSE_MATRIX: sub = getSubMatrix(Mat_(mat), IS_(row), IS_(col), Mat_(out[0])) if sub is not None: addRef(sub.mat) out[0] = sub.mat return FunctionEnd() cdef PetscErrorCode MatSetOption_Python( PetscMat mat, MatOption op, PetscBool flag, ) \ except IERR with gil: FunctionBegin(b"MatSetOption_Python") cdef setOption = PyMat(mat).setOption if setOption is not None: setOption(Mat_(mat), op, flag) return FunctionEnd() cdef PetscErrorCode MatSetUp_Python( PetscMat mat, ) \ except IERR with gil: FunctionBegin(b"MatSetUp_Python") cdef PetscInt rbs = -1, cbs = -1 CHKERR( PetscLayoutGetBlockSize(mat.rmap,&rbs) ) CHKERR( PetscLayoutGetBlockSize(mat.cmap,&cbs) ) if rbs == -1: rbs = 1 if cbs == -1: cbs = rbs CHKERR( PetscLayoutSetBlockSize(mat.rmap,rbs) ) CHKERR( PetscLayoutSetBlockSize(mat.cmap,cbs) ) CHKERR( PetscLayoutSetUp(mat.rmap) ) CHKERR( PetscLayoutSetUp(mat.cmap) ) mat.preallocated = PETSC_TRUE # cdef char name[2048] cdef PetscBool found = PETSC_FALSE if PyMat(mat).self is None: CHKERR( PetscOptionsGetString(NULL, getPrefix(mat), b"-mat_python_type", name,sizeof(name),&found) ) if found and name[0]: CHKERR( MatPythonSetType_PYTHON(mat,name) ) if PyMat(mat).self is None: return PetscSETERR(PETSC_ERR_USER, "Python context not set, call one of \n" " * MatPythonSetType(mat,\"[package.]module.class\")\n" " * MatSetFromOptions(mat) and pass option " "-mat_python_type [package.]module.class") # cdef setUp = PyMat(mat).setUp if setUp is not None: setUp(Mat_(mat)) return FunctionEnd() cdef PetscErrorCode MatAssemblyBegin_Python( PetscMat mat, MatAssemblyType at, ) \ except IERR with gil: FunctionBegin(b"MatAssemblyBegin_Python") cdef assembly = PyMat(mat).assemblyBegin if assembly is not None: assembly(Mat_(mat), at) return FunctionEnd() cdef PetscErrorCode MatAssemblyEnd_Python( PetscMat mat, MatAssemblyType at, ) \ except IERR with gil: FunctionBegin(b"MatAssemblyEnd_Python") cdef assembly = PyMat(mat).assemblyEnd if assembly is None: assembly = PyMat(mat).assembly if assembly is not None: assembly(Mat_(mat), at) return FunctionEnd() cdef PetscErrorCode MatZeroEntries_Python( PetscMat mat, ) \ except IERR with gil: FunctionBegin(b"MatZeroEntries_Python") cdef zeroEntries = PyMat(mat).zeroEntries if zeroEntries is None: return UNSUPPORTED(b"zeroEntries") zeroEntries(Mat_(mat)) return FunctionEnd() cdef PetscErrorCode MatScale_Python( PetscMat mat, PetscScalar s, ) \ except IERR with gil: FunctionBegin(b"MatScale_Python") cdef scale = PyMat(mat).scale if scale is None: return UNSUPPORTED(b"scale") scale(Mat_(mat), toScalar(s)) return FunctionEnd() cdef PetscErrorCode MatShift_Python( PetscMat mat, PetscScalar s, ) \ except IERR with gil: FunctionBegin(b"MatShift_Python") cdef shift = PyMat(mat).shift if shift is None: return UNSUPPORTED(b"shift") shift(Mat_(mat), toScalar(s)) return FunctionEnd() cdef PetscErrorCode MatCreateVecs_Python( PetscMat mat, PetscVec *x, PetscVec *y, ) \ except IERR with gil: FunctionBegin(b"MatCreateVecs_Python") cdef createVecs = PyMat(mat).createVecs if createVecs is None: try: mat.ops.getvecs = NULL CHKERR( MatCreateVecs(mat,x,y) ) finally: mat.ops.getvecs = MatCreateVecs_Python return FunctionEnd() if createVecs is None: return UNSUPPORTED(b"createVecs") cdef Vec u, v u, v = createVecs(Mat_(mat)) if x != NULL: x[0] = u.vec u.vec = NULL if y != NULL: y[0] = v.vec v.vec = NULL return FunctionEnd() cdef PetscErrorCode MatMult_Python( PetscMat mat, PetscVec x, PetscVec y, ) \ except IERR with gil: FunctionBegin(b"MatMult_Python") cdef mult = PyMat(mat).mult if mult is None: return UNSUPPORTED(b"mult") mult(Mat_(mat), Vec_(x), Vec_(y)) return FunctionEnd() cdef PetscErrorCode MatMultTranspose_Python( PetscMat mat, PetscVec x, PetscVec y, ) \ except IERR with gil: FunctionBegin(b"MatMultTranspose_Python") cdef multTranspose = PyMat(mat).multTranspose cdef PetscBool symmset, symmknown if multTranspose is None: symmset = symmknown = PETSC_FALSE CHKERR( MatIsSymmetricKnown(mat,&symmset,&symmknown) ) if symmset and symmknown: CHKERR( MatMult(mat,x,y) ) return FunctionEnd() if multTranspose is None: return UNSUPPORTED(b"multTranspose") multTranspose(Mat_(mat), Vec_(x), Vec_(y)) return FunctionEnd() cdef PetscErrorCode MatMultHermitian_Python( PetscMat mat, PetscVec x, PetscVec y, ) \ except IERR with gil: FunctionBegin(b"MatMultHermitian_Python") cdef multHermitian = PyMat(mat).multHermitian cdef PetscBool hermset, hermknown if multHermitian is None: hermset = hermknown = PETSC_FALSE CHKERR( MatIsHermitianKnown(mat,&hermset,&hermknown) ) if hermset and hermknown: CHKERR( MatMult(mat,x,y) ) return FunctionEnd() if multHermitian is None: return UNSUPPORTED(b"multHermitian") multHermitian(Mat_(mat), Vec_(x), Vec_(y)) return FunctionEnd() cdef PetscErrorCode MatMultAdd_Python( PetscMat mat, PetscVec x, PetscVec v, PetscVec y, ) \ except IERR with gil: FunctionBegin(b"MatMultAdd_Python") cdef multAdd = PyMat(mat).multAdd cdef PetscVec t = NULL if multAdd is None: if v == y: CHKERR( VecDuplicate(y, &t) ) CHKERR( MatMult(mat,x,t) ) CHKERR( VecAXPY(y,1.0,t) ) CHKERR( VecDestroy(&t) ) else: CHKERR( MatMult(mat,x,y) ) CHKERR( VecAXPY(y,1.0,v) ) return FunctionEnd() if multAdd is None: return UNSUPPORTED(b"multAdd") multAdd(Mat_(mat), Vec_(x), Vec_(v), Vec_(y)) return FunctionEnd() cdef PetscErrorCode MatMultTransposeAdd_Python( PetscMat mat, PetscVec x, PetscVec v, PetscVec y, ) \ except IERR with gil: FunctionBegin(b"MatMultTransposeAdd_Python") cdef multTransposeAdd = PyMat(mat).multTransposeAdd if multTransposeAdd is not None: CHKERR( MatMultTranspose(mat,x,y) ) CHKERR( VecAXPY(y,1.0,v) ) return FunctionEnd() if multTransposeAdd is None: return UNSUPPORTED(b"multTransposeAdd") multTransposeAdd(Mat_(mat), Vec_(x), Vec_(v), Vec_(y)) return FunctionEnd() cdef PetscErrorCode MatMultHermitianAdd_Python( PetscMat mat, PetscVec x, PetscVec v, PetscVec y, ) \ except IERR with gil: FunctionBegin(b"MatMultHermitianAdd_Python") cdef multHermitianAdd = PyMat(mat).multHermitianAdd if multHermitianAdd is not None: CHKERR( MatMultHermitian(mat,x,y) ) CHKERR( VecAXPY(y,1.0,v) ) return FunctionEnd() if multHermitianAdd is None: return UNSUPPORTED(b"multHermitianAdd") multHermitianAdd(Mat_(mat), Vec_(x), Vec_(v), Vec_(y)) return FunctionEnd() cdef PetscErrorCode MatMultDiagonalBlock_Python( PetscMat mat, PetscVec x, PetscVec y, ) \ except IERR with gil: FunctionBegin(b"MatMultDiagonalBlock_Python") cdef multDiagonalBlock = PyMat(mat).multDiagonalBlock if multDiagonalBlock is None: return UNSUPPORTED(b"multDiagonalBlock") multDiagonalBlock(Mat_(mat), Vec_(x), Vec_(y)) return FunctionEnd() cdef PetscErrorCode MatSolve_Python( PetscMat mat, PetscVec b, PetscVec x, ) \ except IERR with gil: FunctionBegin(b"MatSolve_Python") cdef solve = PyMat(mat).solve if solve is None: return UNSUPPORTED(b"solve") solve(Mat_(mat), Vec_(b), Vec_(x)) return FunctionEnd() cdef PetscErrorCode MatSolveTranspose_Python( PetscMat mat, PetscVec b, PetscVec x, ) \ except IERR with gil: FunctionBegin(b"MatSolveTranspose_Python") cdef solveTranspose = PyMat(mat).solveTranspose cdef PetscBool symmset, symmknown if solveTranspose is None: symmset = symmknown = PETSC_FALSE CHKERR( MatIsSymmetricKnown(mat,&symmset,&symmknown) ) if symmset and symmknown: CHKERR( MatSolve(mat,b,x) ) return FunctionEnd() if solveTranspose is None: return UNSUPPORTED(b"solveTranspose") solveTranspose(Mat_(mat), Vec_(b), Vec_(x)) return FunctionEnd() cdef PetscErrorCode MatSolveAdd_Python( PetscMat mat, PetscVec b, PetscVec y, PetscVec x, ) \ except IERR with gil: FunctionBegin(b"MatSolveAdd_Python") cdef solveAdd = PyMat(mat).solveAdd if solveAdd is None: CHKERR( MatSolve(mat,b,x) ) CHKERR( VecAXPY(x,1.0,y) ) return FunctionEnd() if solveAdd is None: return UNSUPPORTED(b"solveAdd") solveAdd(Mat_(mat), Vec_(b), Vec_(y), Vec_(x)) return FunctionEnd() cdef PetscErrorCode MatSolveTransposeAdd_Python( PetscMat mat, PetscVec b, PetscVec y, PetscVec x, ) \ except IERR with gil: FunctionBegin(b"MatSolveTransposeAdd_Python") cdef solveTransposeAdd = PyMat(mat).solveTransposeAdd if solveTransposeAdd is not None: CHKERR( MatSolveTranspose(mat,b,x) ) CHKERR( VecAXPY(x,1.0,y) ) return FunctionEnd() if solveTransposeAdd is None: return UNSUPPORTED(b"solveTransposeAdd") solveTransposeAdd(Mat_(mat), Vec_(b), Vec_(y), Vec_(x)) return FunctionEnd() cdef PetscErrorCode MatSOR_Python( PetscMat mat, PetscVec b, PetscReal omega, MatSORType sortype, PetscReal shift, PetscInt its, PetscInt lits, PetscVec x )\ except IERR with gil: FunctionBegin(b"MatSOR_Python") cdef SOR = PyMat(mat).SOR if SOR is None: return UNSUPPORTED(b"SOR") SOR(Mat_(mat), Vec_(b), asReal(omega), asInt(sortype), asReal(shift), asInt(its), asInt(lits), Vec_(x)) return FunctionEnd() cdef PetscErrorCode MatGetDiagonal_Python( PetscMat mat, PetscVec v, ) \ except IERR with gil: FunctionBegin(b"MatGetDiagonal_Python") cdef getDiagonal = PyMat(mat).getDiagonal if getDiagonal is None: return UNSUPPORTED(b"getDiagonal") getDiagonal(Mat_(mat), Vec_(v)) return FunctionEnd() cdef PetscErrorCode MatSetDiagonal_Python( PetscMat mat, PetscVec v, InsertMode im, ) \ except IERR with gil: FunctionBegin(b"MatSetDiagonal_Python") cdef setDiagonal = PyMat(mat).setDiagonal cdef bint addv = True if im == ADD_VALUES else False if setDiagonal is None: return UNSUPPORTED(b"setDiagonal") setDiagonal(Mat_(mat), Vec_(v), addv) return FunctionEnd() cdef PetscErrorCode MatDiagonalScale_Python( PetscMat mat, PetscVec l, PetscVec r, ) \ except IERR with gil: FunctionBegin(b"MatDiagonalScale_Python") cdef diagonalScale = PyMat(mat).diagonalScale if diagonalScale is None: return UNSUPPORTED(b"diagonalScale") diagonalScale(Mat_(mat), Vec_(l), Vec_(r)) return FunctionEnd() cdef PetscErrorCode MatNorm_Python( PetscMat mat, NormType ntype, PetscReal *nrm, ) \ except IERR with gil: FunctionBegin(b"MatNorm_Python") cdef norm = PyMat(mat).norm if norm is None: return UNSUPPORTED(b"norm") retval = norm(Mat_(mat), ntype) nrm[0] = retval return FunctionEnd() cdef PetscErrorCode MatRealPart_Python( PetscMat mat, ) \ except IERR with gil: FunctionBegin(b"MatRealPart_Python") cdef realPart = PyMat(mat).realPart if realPart is None: return UNSUPPORTED(b"realPart") realPart(Mat_(mat)) return FunctionEnd() cdef PetscErrorCode MatImagPart_Python( PetscMat mat, ) \ except IERR with gil: FunctionBegin(b"MatImagPart_Python") cdef imagPart = PyMat(mat).imagPart if imagPart is None: return UNSUPPORTED(b"imagPart") imagPart(Mat_(mat)) return FunctionEnd() cdef PetscErrorCode MatConjugate_Python( PetscMat mat, ) \ except IERR with gil: FunctionBegin(b"MatConjugate_Python") cdef conjugate = PyMat(mat).conjugate if conjugate is None: return UNSUPPORTED(b"conjugate") conjugate(Mat_(mat)) return FunctionEnd() # -------------------------------------------------------------------- cdef extern from * nogil: struct _PCOps: PetscErrorCode (*destroy)(PetscPC) except IERR PetscErrorCode (*setup)(PetscPC) except IERR PetscErrorCode (*reset)(PetscPC) except IERR PetscErrorCode (*setfromoptions)(PetscOptionItems*,PetscPC) except IERR PetscErrorCode (*view)(PetscPC,PetscViewer) except IERR PetscErrorCode (*presolve)(PetscPC,PetscKSP,PetscVec,PetscVec) except IERR PetscErrorCode (*postsolve)(PetscPC,PetscKSP,PetscVec,PetscVec) except IERR PetscErrorCode (*apply)(PetscPC,PetscVec,PetscVec) except IERR PetscErrorCode (*applytranspose)(PetscPC,PetscVec,PetscVec) except IERR PetscErrorCode (*applysymmetricleft)(PetscPC,PetscVec,PetscVec) except IERR PetscErrorCode (*applysymmetricright)(PetscPC,PetscVec,PetscVec) except IERR ctypedef _PCOps *PCOps struct _p_PC: void *data PCOps ops @cython.internal cdef class _PyPC(_PyObj): pass cdef inline _PyPC PyPC(PetscPC pc): if pc != NULL and pc.data != NULL: return <_PyPC>pc.data else: return _PyPC.__new__(_PyPC) cdef public PetscErrorCode PCPythonGetContext(PetscPC pc, void **ctx) \ except IERR: FunctionBegin(b"PCPythonGetContext") PyPC(pc).getcontext(ctx) return FunctionEnd() cdef public PetscErrorCode PCPythonSetContext(PetscPC pc, void *ctx) \ except IERR: FunctionBegin(b"PCPythonSetContext") PyPC(pc).setcontext(ctx, PC_(pc)) return FunctionEnd() cdef PetscErrorCode PCPythonSetType_PYTHON(PetscPC pc, char name[]) \ except IERR with gil: FunctionBegin(b"PCPythonSetType_PYTHON") if name == NULL: return FunctionEnd() # XXX cdef object ctx = createcontext(name) PCPythonSetContext(pc, ctx) PyPC(pc).setname(name) return FunctionEnd() cdef PetscErrorCode PCCreate_Python( PetscPC pc, ) \ except IERR with gil: FunctionBegin(b"PCCreate_Python") # cdef PCOps ops = pc.ops ops.reset = PCReset_Python ops.destroy = PCDestroy_Python ops.setup = PCSetUp_Python ops.setfromoptions = PCSetFromOptions_Python ops.view = PCView_Python ops.presolve = PCPreSolve_Python ops.postsolve = PCPostSolve_Python ops.apply = PCApply_Python ops.applytranspose = PCApplyTranspose_Python ops.applysymmetricleft = PCApplySymmetricLeft_Python ops.applysymmetricright = PCApplySymmetricRight_Python # CHKERR( PetscObjectComposeFunction( pc, b"PCPythonSetType_C", PCPythonSetType_PYTHON) ) # cdef ctx = PyPC(NULL) pc.data = ctx Py_INCREF(pc.data) return FunctionEnd() cdef PetscErrorCode PCDestroy_Python( PetscPC pc, ) \ except IERR with gil: FunctionBegin(b"PCDestroy_Python") CHKERR( PetscObjectComposeFunction( pc, b"PCPythonSetType_C", NULL) ) # if not Py_IsInitialized(): return FunctionEnd() try: addRef(pc) PCPythonSetContext(pc, NULL) finally: delRef(pc) Py_DECREF(pc.data) pc.data = NULL return FunctionEnd() cdef PetscErrorCode PCSetUp_Python( PetscPC pc, ) \ except IERR with gil: FunctionBegin(b"PCSetUp_Python") # cdef char name[2048] cdef PetscBool found = PETSC_FALSE if PyPC(pc).self is None: CHKERR( PetscOptionsGetString(NULL, getPrefix(pc), b"-pc_python_type", name,sizeof(name),&found) ) if found and name[0]: CHKERR( PCPythonSetType_PYTHON(pc,name) ) if PyPC(pc).self is None: return PetscSETERR(PETSC_ERR_USER, "Python context not set, call one of \n" " * PCPythonSetType(pc,\"[package.]module.class\")\n" " * PCSetFromOptions(pc) and pass option " "-pc_python_type [package.]module.class") # cdef setUp = PyPC(pc).setUp if setUp is not None: setUp(PC_(pc)) # cdef o = PyPC(pc) cdef PCOps ops = pc.ops if o.applyTranspose is None: ops.applytranspose = NULL if o.applySymmetricLeft is None: ops.applysymmetricleft = NULL if o.applySymmetricRight is None: ops.applysymmetricright = NULL # return FunctionEnd() cdef PetscErrorCode PCReset_Python( PetscPC pc, ) \ except IERR with gil: if getRef(pc) == 0: return 0 FunctionBegin(b"PCReset_Python") cdef reset = PyPC(pc).reset if reset is not None: reset(PC_(pc)) return FunctionEnd() cdef PetscErrorCode PCSetFromOptions_Python( PetscOptionItems *PetscOptionsObject, PetscPC pc, ) \ except IERR with gil: FunctionBegin(b"PCSetFromOptions_Python") # cdef char name[2048], *defval = PyPC(pc).getname() cdef PetscBool found = PETSC_FALSE cdef PetscOptionItems *opts "PetscOptionsObject" = PetscOptionsObject CHKERR( PetscOptionsString( b"-pc_python_type",b"Python [package.]module[.{class|function}]", b"PCPythonSetType",defval,name,sizeof(name),&found) ); opts; if found and name[0]: CHKERR( PCPythonSetType_PYTHON(pc,name) ) # cdef setFromOptions = PyPC(pc).setFromOptions if setFromOptions is not None: setFromOptions(PC_(pc)) return FunctionEnd() cdef PetscErrorCode PCView_Python( PetscPC pc, PetscViewer vwr, ) \ except IERR with gil: FunctionBegin(b"PCView_Python") viewcontext(PyPC(pc), vwr) cdef view = PyPC(pc).view if view is not None: view(PC_(pc), Viewer_(vwr)) return FunctionEnd() cdef PetscErrorCode PCPreSolve_Python( PetscPC pc, PetscKSP ksp, PetscVec b, PetscVec x, ) \ except IERR with gil: FunctionBegin(b"PCPreSolve_Python") cdef preSolve = PyPC(pc).preSolve if preSolve is not None: preSolve(PC_(pc), KSP_(ksp), Vec_(b), Vec_(x)) return FunctionEnd() cdef PetscErrorCode PCPostSolve_Python( PetscPC pc, PetscKSP ksp, PetscVec b, PetscVec x, ) \ except IERR with gil: FunctionBegin(b"PCPostSolve_Python") cdef postSolve = PyPC(pc).postSolve if postSolve is not None: postSolve(PC_(pc), KSP_(ksp), Vec_(b), Vec_(x)) return FunctionEnd() cdef PetscErrorCode PCApply_Python( PetscPC pc, PetscVec x, PetscVec y, ) \ except IERR with gil: FunctionBegin(b"PCApply_Python") cdef apply = PyPC(pc).apply apply(PC_(pc), Vec_(x), Vec_(y)) return FunctionEnd() cdef PetscErrorCode PCApplyTranspose_Python( PetscPC pc, PetscVec x, PetscVec y, ) \ except IERR with gil: FunctionBegin(b"PCApplyTranspose_Python") cdef applyTranspose = PyPC(pc).applyTranspose applyTranspose(PC_(pc), Vec_(x), Vec_(y)) return FunctionEnd() cdef PetscErrorCode PCApplySymmetricLeft_Python( PetscPC pc, PetscVec x, PetscVec y, ) \ except IERR with gil: FunctionBegin(b"PCApplySymmetricLeft_Python") cdef applySymmetricLeft = PyPC(pc).applySymmetricLeft applySymmetricLeft(PC_(pc), Vec_(x), Vec_(y)) return FunctionEnd() cdef PetscErrorCode PCApplySymmetricRight_Python( PetscPC pc, PetscVec x, PetscVec y, ) \ except IERR with gil: FunctionBegin(b"PCApplySymmetricRight_Python") cdef applySymmetricRight = PyPC(pc).applySymmetricRight applySymmetricRight(PC_(pc), Vec_(x), Vec_(y)) return FunctionEnd() # -------------------------------------------------------------------- cdef extern from * nogil: ctypedef enum KSPNormType: KSP_NORM_NONE KSP_NORM_PRECONDITIONED KSP_NORM_UNPRECONDITIONED KSP_NORM_NATURAL ctypedef enum PCSide: PC_LEFT PC_RIGHT PC_SYMMETRIC ctypedef enum KSPConvergedReason: KSP_CONVERGED_ITERATING cdef extern from * nogil: struct _KSPOps: PetscErrorCode (*destroy)(PetscKSP) except IERR PetscErrorCode (*setup)(PetscKSP) except IERR PetscErrorCode (*reset)(PetscKSP) except IERR PetscErrorCode (*setfromoptions)(PetscOptionItems*, PetscKSP) except IERR PetscErrorCode (*view)(PetscKSP,PetscViewer) except IERR PetscErrorCode (*solve)(PetscKSP) except IERR PetscErrorCode (*buildsolution)(PetscKSP,PetscVec,PetscVec*) except IERR PetscErrorCode (*buildresidual)(PetscKSP,PetscVec,PetscVec,PetscVec*) except IERR ctypedef _KSPOps *KSPOps struct _p_KSP: void *data KSPOps ops PetscBool transpose_solve PetscInt iter"its",max_its"max_it" PetscReal norm"rnorm" KSPConvergedReason reason PetscErrorCode KSPCreate(MPI_Comm,PetscKSP*) PetscErrorCode KSPSetSupportedNorm(PetscKSP,KSPNormType,PCSide,PetscInt) PetscErrorCode KSPSolve(PetscKSP,PetscVec,PetscVec) PetscErrorCode KSPSetOperators(PetscKSP,PetscMat,PetscMat) cdef extern from * nogil: PetscErrorCode KSPGetRhs(PetscKSP,PetscVec*) PetscErrorCode KSPGetSolution(PetscKSP,PetscVec*) PetscErrorCode KSPBuildSolutionDefault(PetscKSP,PetscVec,PetscVec*) PetscErrorCode KSPBuildResidualDefault(PetscKSP,PetscVec,PetscVec,PetscVec*) PetscErrorCode KSPGetIterationNumber(PetscKSP,PetscInt*) PetscErrorCode KSPBuildSolution(PetscKSP,PetscVec,PetscVec*) PetscErrorCode KSPBuildResidual(PetscKSP,PetscVec,PetscVec,PetscVec*) PetscErrorCode KSPConverged(PetscKSP,PetscInt,PetscReal,KSPConvergedReason*) PetscErrorCode KSPLogHistory(PetscKSP,PetscReal) PetscErrorCode KSPMonitor(PetscKSP,PetscInt,PetscReal) @cython.internal cdef class _PyKSP(_PyObj): pass cdef inline _PyKSP PyKSP(PetscKSP ksp): if ksp != NULL and ksp.data != NULL: return <_PyKSP>ksp.data else: return _PyKSP.__new__(_PyKSP) cdef public PetscErrorCode KSPPythonGetContext(PetscKSP ksp, void **ctx) \ except IERR: FunctionBegin(b"KSPPythonGetContext") PyKSP(ksp).getcontext(ctx) return FunctionEnd() cdef public PetscErrorCode KSPPythonSetContext(PetscKSP ksp, void *ctx) \ except IERR: FunctionBegin(b"KSPPythonSetContext") PyKSP(ksp).setcontext(ctx, KSP_(ksp)) return FunctionEnd() cdef PetscErrorCode KSPPythonSetType_PYTHON(PetscKSP ksp, char name[]) \ except IERR with gil: FunctionBegin(b"KSPPythonSetType_PYTHON") if name == NULL: return FunctionEnd() # XXX cdef object ctx = createcontext(name) KSPPythonSetContext(ksp, ctx) PyKSP(ksp).setname(name) return FunctionEnd() cdef PetscErrorCode KSPCreate_Python( PetscKSP ksp, ) \ except IERR with gil: FunctionBegin(b"KSPCreate_Python") # cdef KSPOps ops = ksp.ops ops.reset = KSPReset_Python ops.destroy = KSPDestroy_Python ops.setup = KSPSetUp_Python ops.setfromoptions = KSPSetFromOptions_Python ops.view = KSPView_Python ops.solve = KSPSolve_Python ops.buildsolution = KSPBuildSolution_Python ops.buildresidual = KSPBuildResidual_Python # CHKERR( PetscObjectComposeFunction( ksp, b"KSPPythonSetType_C", KSPPythonSetType_PYTHON) ) # cdef ctx = PyKSP(NULL) ksp.data = ctx Py_INCREF(ksp.data) # CHKERR( KSPSetSupportedNorm( ksp, KSP_NORM_PRECONDITIONED, PC_LEFT, 3) ) CHKERR( KSPSetSupportedNorm( ksp, KSP_NORM_UNPRECONDITIONED, PC_RIGHT, 3) ) CHKERR( KSPSetSupportedNorm( ksp, KSP_NORM_UNPRECONDITIONED, PC_LEFT, 2) ) CHKERR( KSPSetSupportedNorm( ksp, KSP_NORM_PRECONDITIONED, PC_RIGHT, 2) ) CHKERR( KSPSetSupportedNorm( ksp, KSP_NORM_PRECONDITIONED, PC_SYMMETRIC, 1) ) CHKERR( KSPSetSupportedNorm( ksp, KSP_NORM_UNPRECONDITIONED, PC_SYMMETRIC, 1) ) return FunctionEnd() cdef PetscErrorCode KSPDestroy_Python( PetscKSP ksp, ) \ except IERR with gil: FunctionBegin(b"KSPDestroy_Python") CHKERR( PetscObjectComposeFunction( ksp, b"KSPPythonSetType_C", NULL)) # if not Py_IsInitialized(): return FunctionEnd() try: addRef(ksp) KSPPythonSetContext(ksp, NULL) finally: delRef(ksp) Py_DECREF(ksp.data) ksp.data = NULL return FunctionEnd() cdef PetscErrorCode KSPSetUp_Python( PetscKSP ksp, ) \ except IERR with gil: FunctionBegin(b"KSPSetUp_Python") # cdef char name[2048] cdef PetscBool found = PETSC_FALSE if PyKSP(ksp).self is None: CHKERR( PetscOptionsGetString(NULL, getPrefix(ksp), b"-ksp_python_type", name,sizeof(name),&found) ) if found and name[0]: CHKERR( KSPPythonSetType_PYTHON(ksp,name) ) if PyKSP(ksp).self is None: return PetscSETERR(PETSC_ERR_USER, "Python context not set, call one of \n" " * KSPPythonSetType(ksp,\"[package.]module.class\")\n" " * KSPSetFromOptions(ksp) and pass option " "-ksp_python_type [package.]module.class") # cdef setUp = PyKSP(ksp).setUp if setUp is not None: setUp(KSP_(ksp)) return FunctionEnd() cdef PetscErrorCode KSPReset_Python( PetscKSP ksp, ) \ except IERR with gil: if getRef(ksp) == 0: return 0 FunctionBegin(b"KSPReset_Python") CHKERR( PetscObjectCompose(ksp,b"@ksp.vec_work_sol",NULL) ) CHKERR( PetscObjectCompose(ksp,b"@ksp.vec_work_res",NULL) ) cdef reset = PyKSP(ksp).reset if reset is not None: reset(KSP_(ksp)) return FunctionEnd() cdef PetscErrorCode KSPSetFromOptions_Python( PetscOptionItems *PetscOptionsObject, PetscKSP ksp, ) \ except IERR with gil: FunctionBegin(b"KSPSetFromOptions_Python") # cdef char name[2048], *defval = PyKSP(ksp).getname() cdef PetscBool found = PETSC_FALSE cdef PetscOptionItems *opts "PetscOptionsObject" = PetscOptionsObject CHKERR( PetscOptionsString( b"-ksp_python_type",b"Python [package.]module[.{class|function}]", b"KSPPythonSetType",defval,name,sizeof(name),&found) ); opts; if found and name[0]: CHKERR( KSPPythonSetType_PYTHON(ksp,name) ) # cdef setFromOptions = PyKSP(ksp).setFromOptions if setFromOptions is not None: setFromOptions(KSP_(ksp)) return FunctionEnd() cdef PetscErrorCode KSPView_Python( PetscKSP ksp, PetscViewer vwr, ) \ except IERR with gil: FunctionBegin(b"KSPView_Python") viewcontext(PyKSP(ksp), vwr) cdef view = PyKSP(ksp).view if view is not None: view(KSP_(ksp), Viewer_(vwr)) return FunctionEnd() cdef PetscErrorCode KSPBuildSolution_Python( PetscKSP ksp, PetscVec v, PetscVec *V, ) \ except IERR with gil: FunctionBegin(b"KSPBuildSolution_Python") cdef PetscVec x = v cdef buildSolution = PyKSP(ksp).buildSolution if buildSolution is not None: if x == NULL: pass # XXX buildSolution(KSP_(ksp), Vec_(x)) if V != NULL: V[0] = x else: CHKERR( KSPBuildSolutionDefault(ksp, v, V) ) return FunctionEnd() cdef PetscErrorCode KSPBuildResidual_Python( PetscKSP ksp, PetscVec t, PetscVec v, PetscVec *V, ) \ except IERR with gil: FunctionBegin(b"KSPBuildResidual_Python") cdef buildResidual = PyKSP(ksp).buildResidual if buildResidual is not None: buildResidual(KSP_(ksp), Vec_(t), Vec_(v)) if V != NULL: V[0] = v else: CHKERR( KSPBuildResidualDefault(ksp, t, v, V) ) return FunctionEnd() cdef PetscErrorCode KSPSolve_Python( PetscKSP ksp, ) \ except IERR with gil: FunctionBegin(b"KSPSolve_Python") cdef PetscVec B = NULL, X = NULL CHKERR( KSPGetRhs(ksp,&B) ) CHKERR( KSPGetSolution(ksp,&X) ) # cdef solve = None if ksp.transpose_solve: solve = PyKSP(ksp).solveTranspose else: solve = PyKSP(ksp).solve if solve is not None: solve(KSP_(ksp),Vec_(B),Vec_(X)) else: KSPSolve_Python_default(ksp,B,X) return FunctionEnd() cdef PetscErrorCode KSPSolve_Python_default( PetscKSP ksp, PetscVec B, PetscVec X, ) \ except IERR with gil: FunctionBegin(b"KSPSolve_Python_default") # cdef PetscVec t = NULL CHKERR( PetscObjectQuery( ksp, b"@ksp.vec_work_sol", &t) ) if t == NULL: CHKERR( VecDuplicate(X,&t) ) CHKERR( PetscObjectCompose( ksp, b"@ksp.vec_work_sol", t) ) cdef PetscVec v = NULL CHKERR( PetscObjectQuery( ksp, b"@ksp.vec_work_res", &v) ) if v == NULL: CHKERR( VecDuplicate(B,&v) ) CHKERR( PetscObjectCompose( ksp, b"@ksp.vec_work_res", v) ) # cdef PetscInt its = 0 cdef PetscVec R = NULL cdef PetscReal rnorm = 0 # ksp.iter = 0 ksp.reason = KSP_CONVERGED_ITERATING CHKERR( KSPBuildResidual(ksp,t,v,&R) ) CHKERR( VecNorm(R,NORM_2,&rnorm) ) # CHKERR( KSPConverged(ksp,ksp.iter,rnorm,&ksp.reason) ) CHKERR( KSPLogHistory(ksp,ksp.norm) ) CHKERR( KSPMonitor(ksp,ksp.iter,ksp.norm) ) for its from 0 <= its < ksp.max_its: if ksp.reason: break KSPPreStep_Python(ksp) # KSPStep_Python(ksp,B,X) CHKERR( KSPBuildResidual(ksp,t,v,&R) ) CHKERR( VecNorm(R,NORM_2,&rnorm) ) ksp.iter += 1 # KSPPostStep_Python(ksp) CHKERR( KSPConverged(ksp,ksp.iter,rnorm,&ksp.reason) ) CHKERR( KSPLogHistory(ksp,ksp.norm) ) CHKERR( KSPMonitor(ksp,ksp.iter,ksp.norm) ) its # silent unused warning # return FunctionEnd() cdef PetscErrorCode KSPPreStep_Python( PetscKSP ksp, ) \ except IERR with gil: FunctionBegin(b"KSPPreStep_Python") cdef preStep = PyKSP(ksp).preStep if preStep is not None: preStep(KSP_(ksp)) return FunctionEnd() cdef PetscErrorCode KSPPostStep_Python( PetscKSP ksp, ) \ except IERR with gil: FunctionBegin(b"KSPPostStep_Python") cdef postStep = PyKSP(ksp).postStep if postStep is not None: postStep(KSP_(ksp)) return FunctionEnd() cdef PetscErrorCode KSPStep_Python( PetscKSP ksp, PetscVec B, PetscVec X, ) \ except IERR with gil: FunctionBegin(b"KSPStep_Python") cdef step = None if ksp.transpose_solve: step = PyKSP(ksp).stepTranspose if step is None: return UNSUPPORTED(b"stepTranspose") else: step = PyKSP(ksp).step if step is None: return UNSUPPORTED(b"step") step(KSP_(ksp),Vec_(B),Vec_(X)) return FunctionEnd() # -------------------------------------------------------------------- cdef extern from * nogil: ctypedef enum SNESConvergedReason: SNES_CONVERGED_ITERATING cdef extern from * nogil: struct _SNESOps: PetscErrorCode (*destroy)(PetscSNES) except IERR PetscErrorCode (*setup)(PetscSNES) except IERR PetscErrorCode (*reset)(PetscSNES) except IERR PetscErrorCode (*setfromoptions)(PetscOptionItems*,PetscSNES) except IERR PetscErrorCode (*view)(PetscSNES,PetscViewer) except IERR PetscErrorCode (*solve)(PetscSNES) except IERR ctypedef _SNESOps *SNESOps struct _p_SNES: void *data SNESOps ops PetscInt iter,max_its,linear_its PetscReal norm,rtol,ttol SNESConvergedReason reason PetscVec vec_sol,vec_sol_update,vec_func PetscMat jacobian,jacobian_pre PetscKSP ksp PetscErrorCode SNESCreate(MPI_Comm,PetscSNES*) PetscErrorCode SNESSolve(PetscSNES,PetscVec,PetscVec) ctypedef PetscErrorCode (*SNESFunction)(PetscSNES,PetscVec,PetscVec,void*) PetscErrorCode SNESGetFunction(PetscSNES,PetscVec*,SNESFunction*,void*) PetscErrorCode SNESSetFunction(PetscSNES,PetscVec,SNESFunction,void*) int SNESComputeFunction(PetscSNES,PetscVec,PetscVec) ctypedef PetscErrorCode (*SNESJacobian)(PetscSNES,PetscVec,PetscMat,PetscMat,void*) PetscErrorCode SNESGetJacobian(PetscSNES,PetscMat*,PetscMat*,SNESJacobian*,void*) PetscErrorCode SNESSetJacobian(PetscSNES,PetscMat,PetscMat,SNESJacobian,void*) int SNESComputeJacobian(PetscSNES,PetscVec,PetscMat,PetscMat) SNESJacobian MatMFFDComputeJacobian PetscErrorCode SNESGetKSP(PetscSNES,PetscKSP*) cdef extern from * nogil: PetscErrorCode SNESGetRhs(PetscSNES,PetscVec*) PetscErrorCode SNESGetSolution(PetscSNES,PetscVec*) PetscErrorCode SNESGetSolutionUpdate(PetscSNES,PetscVec*) PetscErrorCode SNESGetIterationNumber(PetscSNES,PetscInt*) PetscErrorCode SNESGetLinearSolveIterations(PetscSNES,PetscInt*) PetscErrorCode SNESGetConvergedReason(PetscSNES,SNESConvergedReason*) PetscErrorCode SNESConverged(PetscSNES,PetscInt,PetscReal,PetscReal,PetscReal,SNESConvergedReason*) PetscErrorCode SNESLogHistory(PetscSNES,PetscReal,PetscInt) PetscErrorCode SNESMonitor(PetscSNES,PetscInt,PetscReal) PetscErrorCode SNESSetFromOptions(PetscSNES) @cython.internal cdef class _PySNES(_PyObj): pass cdef inline _PySNES PySNES(PetscSNES snes): if snes != NULL and snes.data != NULL: return <_PySNES>snes.data else: return _PySNES.__new__(_PySNES) cdef public PetscErrorCode SNESPythonGetContext(PetscSNES snes, void **ctx) \ except IERR: FunctionBegin(b"SNESPythonGetContext ") PySNES(snes).getcontext(ctx) return FunctionEnd() cdef public PetscErrorCode SNESPythonSetContext(PetscSNES snes, void *ctx) \ except IERR: FunctionBegin(b"SNESPythonSetContext ") PySNES(snes).setcontext(ctx, SNES_(snes)) return FunctionEnd() cdef PetscErrorCode SNESPythonSetType_PYTHON(PetscSNES snes, char name[]) \ except IERR with gil: FunctionBegin(b"SNESPythonSetType_PYTHON") if name == NULL: return FunctionEnd() # XXX cdef object ctx = createcontext(name) SNESPythonSetContext(snes, ctx) PySNES(snes).setname(name) return FunctionEnd() cdef PetscErrorCode SNESCreate_Python( PetscSNES snes, ) \ except IERR with gil: FunctionBegin(b"SNESCreate_Python") # cdef SNESOps ops = snes.ops ops.reset = SNESReset_Python ops.destroy = SNESDestroy_Python ops.setup = SNESSetUp_Python ops.setfromoptions = SNESSetFromOptions_Python ops.view = SNESView_Python ops.solve = SNESSolve_Python # CHKERR( PetscObjectComposeFunction( snes, b"SNESPythonSetType_C", SNESPythonSetType_PYTHON) ) # cdef ctx = PySNES(NULL) snes.data = ctx Py_INCREF(snes.data) return FunctionEnd() cdef PetscErrorCode SNESDestroy_Python( PetscSNES snes, ) \ except IERR with gil: FunctionBegin(b"SNESDestroy_Python") CHKERR( PetscObjectComposeFunction( snes, b"SNESPythonSetType_C", NULL) ) # if not Py_IsInitialized(): return FunctionEnd() try: addRef(snes) SNESPythonSetContext(snes, NULL) finally: delRef(snes) Py_DECREF(snes.data) snes.data = NULL return FunctionEnd() cdef PetscErrorCode SNESSetUp_Python( PetscSNES snes, ) \ except IERR with gil: FunctionBegin(b"SNESSetUp_Python") # #SNESGetKSP(snes,&snes.ksp) # cdef char name[2048] cdef PetscBool found = PETSC_FALSE if PySNES(snes).self is None: CHKERR( PetscOptionsGetString(NULL, getPrefix(snes),b"-snes_python_type", name,sizeof(name),&found) ) if found and name[0]: CHKERR( SNESPythonSetType_PYTHON(snes,name) ) if PySNES(snes).self is None: return PetscSETERR(PETSC_ERR_USER, "Python context not set, call one of \n" " * SNESPythonSetType(snes,\"[package.]module.class\")\n" " * SNESSetFromOptions(snes) and pass option " "-snes_python_type [package.]module.class") # cdef setUp = PySNES(snes).setUp if setUp is not None: setUp(SNES_(snes)) return FunctionEnd() cdef PetscErrorCode SNESReset_Python( PetscSNES snes, ) \ except IERR with gil: if getRef(snes) == 0: return 0 FunctionBegin(b"SNESReset_Python") cdef reset = PySNES(snes).reset if reset is not None: reset(SNES_(snes)) return FunctionEnd() cdef PetscErrorCode SNESSetFromOptions_Python( PetscOptionItems *PetscOptionsObject, PetscSNES snes, ) \ except IERR with gil: FunctionBegin(b"SNESSetFromOptions_Python") # cdef char name[2048], *defval = PySNES(snes).getname() cdef PetscBool found = PETSC_FALSE cdef PetscOptionItems *opts "PetscOptionsObject" = PetscOptionsObject CHKERR( PetscOptionsString( b"-snes_python_type",b"Python [package.]module[.{class|function}]", b"SNESPythonSetType",defval,name,sizeof(name),&found) ); opts; if found and name[0]: CHKERR( SNESPythonSetType_PYTHON(snes,name) ) # cdef setFromOptions = PySNES(snes).setFromOptions if setFromOptions is not None: setFromOptions(SNES_(snes)) return FunctionEnd() cdef PetscErrorCode SNESView_Python( PetscSNES snes, PetscViewer vwr, ) \ except IERR with gil: FunctionBegin(b"SNESView_Python") viewcontext(PySNES(snes), vwr) cdef view = PySNES(snes).view if view is not None: view(SNES_(snes), Viewer_(vwr)) return FunctionEnd() cdef PetscErrorCode SNESSolve_Python( PetscSNES snes, ) \ except IERR with gil: FunctionBegin(b"SNESSolve_Python") cdef PetscVec b = NULL, x = NULL CHKERR( SNESGetRhs(snes,&b) ) CHKERR( SNESGetSolution(snes,&x) ) # cdef solve = PySNES(snes).solve if solve is not None: solve(SNES_(snes), Vec_(b) if b != NULL else None, Vec_(x)) else: SNESSolve_Python_default(snes) # return FunctionEnd() cdef PetscErrorCode SNESSolve_Python_default( PetscSNES snes, ) \ except IERR with gil: FunctionBegin(b"SNESSolve_Python_default") # cdef PetscVec X=NULL, F=NULL, Y=NULL CHKERR( SNESGetSolution(snes,&X) ) CHKERR( SNESGetFunction(snes,&F,NULL,NULL) ) CHKERR( SNESGetSolutionUpdate(snes,&Y) ) cdef PetscInt its=0, lits=0 cdef PetscReal xnorm = 0.0 cdef PetscReal fnorm = 0.0 cdef PetscReal ynorm = 0.0 # snes.iter = 0 snes.reason = SNES_CONVERGED_ITERATING CHKERR( VecSet(Y,0.0) ) CHKERR( SNESComputeFunction(snes,X,F) ) CHKERR( VecNorm(X,NORM_2,&xnorm) ) CHKERR( VecNorm(F,NORM_2,&fnorm) ) # CHKERR( SNESConverged(snes,snes.iter,xnorm,ynorm,fnorm,&snes.reason) ) CHKERR( SNESLogHistory(snes,snes.norm,lits) ) CHKERR( SNESMonitor(snes,snes.iter,snes.norm) ) for its from 0 <= its < snes.max_its: if snes.reason: break SNESPreStep_Python(snes) # lits = -snes.linear_its SNESStep_Python(snes,X,F,Y) lits += snes.linear_its # CHKERR( VecAXPY(X,-1.0,Y) ) CHKERR( SNESComputeFunction(snes,X,F) ) CHKERR( VecNorm(X,NORM_2,&xnorm) ) CHKERR( VecNorm(F,NORM_2,&fnorm) ) CHKERR( VecNorm(Y,NORM_2,&ynorm) ) snes.iter += 1 # SNESPostStep_Python(snes) CHKERR( SNESConverged(snes,snes.iter,xnorm,ynorm,fnorm,&snes.reason) ) CHKERR( SNESLogHistory(snes,snes.norm,lits) ) CHKERR( SNESMonitor(snes,snes.iter,snes.norm) ) its # silent unused warning # return FunctionEnd() cdef PetscErrorCode SNESPreStep_Python( PetscSNES snes, ) \ except IERR with gil: FunctionBegin(b"SNESPreStep_Python") cdef preStep = PySNES(snes).preStep if preStep is not None: preStep(SNES_(snes)) return FunctionEnd() cdef PetscErrorCode SNESPostStep_Python( PetscSNES snes, ) \ except IERR with gil: FunctionBegin(b"SNESPostStep_Python") cdef postStep = PySNES(snes).postStep if postStep is not None: postStep(SNES_(snes)) return FunctionEnd() cdef PetscErrorCode SNESStep_Python( PetscSNES snes, PetscVec X, PetscVec F, PetscVec Y, ) \ except IERR with gil: FunctionBegin(b"SNESStep_Python") cdef step = PySNES(snes).step if step is not None: step(SNES_(snes),Vec_(X),Vec_(F),Vec_(Y)) else: SNESStep_Python_default(snes,X,F,Y) return FunctionEnd() cdef PetscErrorCode SNESStep_Python_default( PetscSNES snes, PetscVec X, PetscVec F, PetscVec Y, ) \ except IERR with gil: FunctionBegin(b"SNESStep_Python_default") cdef PetscMat J = NULL, P = NULL cdef PetscInt lits = 0 CHKERR( SNESGetJacobian(snes,&J,&P,NULL,NULL) ) CHKERR( SNESComputeJacobian(snes,X,J,P) ) CHKERR( KSPSetOperators(snes.ksp,J,P) ) CHKERR( KSPSolve(snes.ksp,F,Y) ) CHKERR( KSPGetIterationNumber(snes.ksp,&lits) ) snes.linear_its += lits return FunctionEnd() # -------------------------------------------------------------------- cdef extern from * nogil: ctypedef enum TSProblemType: TS_LINEAR TS_NONLINEAR ctypedef enum TSConvergedReason: TS_CONVERGED_ITERATING TS_CONVERGED_TIME TS_CONVERGED_ITS TS_DIVERGED_NONLINEAR_SOLVE TS_DIVERGED_STEP_REJECTED cdef extern from * nogil: struct _TSOps: PetscErrorCode (*destroy)(PetscTS) except IERR PetscErrorCode (*setup)(PetscTS) except IERR PetscErrorCode (*reset)(PetscTS) except IERR PetscErrorCode (*setfromoptions)(PetscOptionItems*,PetscTS) except IERR PetscErrorCode (*view)(PetscTS,PetscViewer) except IERR PetscErrorCode (*step)(PetscTS) except IERR PetscErrorCode (*rollback)(PetscTS) except IERR PetscErrorCode (*interpolate)(PetscTS,PetscReal,PetscVec) except IERR PetscErrorCode (*evaluatestep)(PetscTS,PetscInt,PetscVec,PetscBool*) except IERR PetscErrorCode (*solve)(PetscTS) except IERR PetscErrorCode (*snesfunction)(PetscSNES,PetscVec,PetscVec,PetscTS) except IERR PetscErrorCode (*snesjacobian)(PetscSNES,PetscVec,PetscMat,PetscMat,PetscTS) except IERR ctypedef _TSOps *TSOps struct _TSUserOps: PetscErrorCode (*prestep)(PetscTS) except IERR PetscErrorCode (*prestage)(PetscTS,PetscReal) except IERR PetscErrorCode (*poststage)(PetscTS,PetscReal,PetscInt,PetscVec*) except IERR PetscErrorCode (*poststep)(PetscTS) except IERR PetscErrorCode (*rhsfunction)(PetscTS,PetscReal,PetscVec,PetscVec,void*) except IERR PetscErrorCode (*ifunction) (PetscTS,PetscReal,PetscVec,PetscVec,PetscVec,void*) except IERR PetscErrorCode (*rhsjacobian)(PetscTS,PetscReal,PetscVec,PetscMat,PetscMat,void*) except IERR PetscErrorCode (*ijacobian) (PetscTS,PetscReal,PetscVec,PetscVec,PetscReal,PetscMat,PetscMat,void*) except IERR ctypedef _TSUserOps *TSUserOps struct _p_TSAdapt ctypedef _p_TSAdapt *PetscTSAdapt "TSAdapt" struct _p_TS: void *data PetscDM dm PetscTSAdapt adapt TSOps ops TSUserOps userops TSProblemType problem_type PetscInt snes_its PetscInt ksp_its PetscInt reject PetscInt max_reject PetscInt steps PetscReal ptime PetscVec vec_sol PetscReal time_step PetscInt max_steps PetscReal max_time TSConvergedReason reason PetscSNES snes cdef extern from * nogil: PetscErrorCode TSGetKSP(PetscTS,PetscKSP*) PetscErrorCode TSGetSNES(PetscTS,PetscSNES*) PetscErrorCode TSPreStep(PetscTS) PetscErrorCode TSPreStage(PetscTS,PetscReal) PetscErrorCode TSPostStage(PetscTS,PetscReal,PetscInt,PetscVec*) PetscErrorCode TSPostStep(PetscTS) PetscErrorCode TSAdaptCheckStage(PetscTSAdapt,PetscTS,PetscReal,PetscVec,PetscBool*) PetscErrorCode TSMonitor(PetscTS,PetscInt,PetscReal,PetscVec) PetscErrorCode TSComputeIFunction(PetscTS,PetscReal,PetscVec,PetscVec,PetscVec,PetscBool) PetscErrorCode TSComputeIJacobian(PetscTS,PetscReal,PetscVec,PetscVec,PetscReal,PetscMat,PetscMat,PetscBool) PetscErrorCode SNESTSFormFunction(PetscSNES,PetscVec,PetscVec,void*) PetscErrorCode SNESTSFormJacobian(PetscSNES,PetscVec,PetscMat,PetscMat,void*) @cython.internal cdef class _PyTS(_PyObj): pass cdef inline _PyTS PyTS(PetscTS ts): if ts != NULL and ts.data != NULL: return <_PyTS>ts.data else: return _PyTS.__new__(_PyTS) cdef public PetscErrorCode TSPythonGetContext(PetscTS ts, void **ctx) \ except IERR: FunctionBegin(b"TSPythonGetContext") PyTS(ts).getcontext(ctx) return FunctionEnd() cdef public PetscErrorCode TSPythonSetContext(PetscTS ts, void *ctx) \ except IERR: FunctionBegin(b"TSPythonSetContext") PyTS(ts).setcontext(ctx, TS_(ts)) return FunctionEnd() cdef PetscErrorCode TSPythonSetType_PYTHON(PetscTS ts, char name[]) \ except IERR with gil: FunctionBegin(b"TSPythonSetType_PYTHON") if name == NULL: return FunctionEnd() # XXX cdef object ctx = createcontext(name) TSPythonSetContext(ts, ctx) PyTS(ts).setname(name) return 0 cdef PetscErrorCode TSCreate_Python( PetscTS ts, ) \ except IERR with gil: FunctionBegin(b"TSCreate_Python") # cdef TSOps ops = ts.ops ops.reset = TSReset_Python ops.destroy = TSDestroy_Python ops.setup = TSSetUp_Python ops.setfromoptions = TSSetFromOptions_Python ops.view = TSView_Python ops.step = TSStep_Python ops.rollback = TSRollBack_Python ops.interpolate = TSInterpolate_Python ops.evaluatestep = TSEvaluateStep_Python ops.snesfunction = SNESTSFormFunction_Python ops.snesjacobian = SNESTSFormJacobian_Python # CHKERR( PetscObjectComposeFunction( ts, b"TSPythonSetType_C", TSPythonSetType_PYTHON) ) # cdef ctx = PyTS(NULL) ts.data = ctx Py_INCREF(ts.data) return FunctionEnd() cdef PetscErrorCode TSDestroy_Python( PetscTS ts, ) \ except IERR with gil: FunctionBegin(b"TSDestroy_Python") CHKERR( PetscObjectComposeFunction( ts, b"TSPythonSetType_C", NULL) ) # if not Py_IsInitialized(): return FunctionEnd() try: addRef(ts) TSPythonSetContext(ts, NULL) finally: delRef(ts) Py_DECREF(ts.data) ts.data = NULL return FunctionEnd() cdef PetscErrorCode TSSetUp_Python( PetscTS ts, ) \ except IERR with gil: FunctionBegin(b"TSSetUp_Python") # cdef PetscVec vec_update = NULL CHKERR( VecDuplicate(ts.vec_sol,&vec_update) ) CHKERR( PetscObjectCompose(ts, b"@ts.vec_update", vec_update) ) CHKERR( VecDestroy(&vec_update) ) cdef PetscVec vec_dot = NULL CHKERR( VecDuplicate(ts.vec_sol,&vec_dot) ) CHKERR( PetscObjectCompose(ts, b"@ts.vec_dot", vec_dot) ) CHKERR( VecDestroy(&vec_dot) ) # cdef char name[2048] cdef PetscBool found = PETSC_FALSE if PyTS(ts).self is None: CHKERR( PetscOptionsGetString(NULL, getPrefix(ts),b"-ts_python_type", name,sizeof(name),&found) ) if found and name[0]: CHKERR( TSPythonSetType_PYTHON(ts,name) ) if PyTS(ts).self is None: return PetscSETERR(PETSC_ERR_USER, "Python context not set, call one of \n" " * TSPythonSetType(ts,\"[package.]module.class\")\n" " * TSSetFromOptions(ts) and pass option " "-ts_python_type [package.]module.class") # cdef setUp = PyTS(ts).setUp if setUp is not None: setUp(TS_(ts)) return FunctionEnd() cdef PetscErrorCode TSReset_Python( PetscTS ts, ) \ except IERR with gil: if getRef(ts) == 0: return 0 FunctionBegin(b"TSReset_Python") # CHKERR( PetscObjectCompose(ts, b"@ts.vec_update", NULL) ) CHKERR( PetscObjectCompose(ts, b"@ts.vec_dot", NULL) ) # cdef reset = PyTS(ts).reset if reset is not None: reset(TS_(ts)) return FunctionEnd() cdef PetscErrorCode TSSetFromOptions_Python( PetscOptionItems *PetscOptionsObject, PetscTS ts, ) \ except IERR with gil: FunctionBegin(b"TSSetFromOptions_Python") cdef char name[2048], *defval = PyTS(ts).getname() cdef PetscBool found = PETSC_FALSE cdef PetscOptionItems *opts "PetscOptionsObject" = PetscOptionsObject CHKERR( PetscOptionsString( b"-ts_python_type",b"Python [package.]module[.{class|function}]", b"TSPythonSetType",defval,name,sizeof(name),&found) ); opts; if found and name[0]: CHKERR( TSPythonSetType_PYTHON(ts,name) ) # cdef setFromOptions = PyTS(ts).setFromOptions if setFromOptions is not None: setFromOptions(TS_(ts)) CHKERR( SNESSetFromOptions(ts.snes) ) return FunctionEnd() cdef PetscErrorCode TSView_Python( PetscTS ts, PetscViewer vwr, ) \ except IERR with gil: FunctionBegin(b"TSView_Python") viewcontext(PyTS(ts), vwr) cdef view = PyTS(ts).view if view is not None: view(TS_(ts), Viewer_(vwr)) return FunctionEnd() cdef PetscErrorCode TSStep_Python( PetscTS ts, ) \ except IERR with gil: FunctionBegin(b"TSStep_Python") cdef step = PyTS(ts).step if step is not None: step(TS_(ts)) else: TSStep_Python_default(ts) return FunctionEnd() cdef PetscErrorCode TSRollBack_Python( PetscTS ts, ) \ except IERR with gil: FunctionBegin(b"TSRollBack_Python") cdef rollback = PyTS(ts).rollback if rollback is None: return UNSUPPORTED(b"rollback") rollback(TS_(ts)) return FunctionEnd() cdef PetscErrorCode TSInterpolate_Python( PetscTS ts, PetscReal t, PetscVec x, ) \ except IERR with gil: FunctionBegin(b"TSInterpolate _Python") cdef interpolate = PyTS(ts).interpolate if interpolate is None: return UNSUPPORTED(b"interpolate") interpolate(TS_(ts),toReal(t),Vec_(x)) return FunctionEnd() cdef PetscErrorCode TSEvaluateStep_Python( PetscTS ts, PetscInt o, PetscVec x, PetscBool *flag, ) \ except IERR with gil: FunctionBegin(b"TSEvaluateStep _Python") cdef evaluatestep = PyTS(ts).evaluatestep if evaluatestep is None: return UNSUPPORTED(b"evaluatestep") cdef done = evaluatestep(TS_(ts),toInt(o),Vec_(x)) if flag != NULL: flag[0] = PETSC_TRUE if done else PETSC_FALSE elif not done: return PetscSETERR(PETSC_ERR_USER, "Cannot evaluate step") return FunctionEnd() cdef PetscErrorCode SNESTSFormFunction_Python( PetscSNES snes, PetscVec x, PetscVec f, PetscTS ts, ) \ except IERR with gil: # cdef formSNESFunction = PyTS(ts).formSNESFunction if formSNESFunction is not None: args = (SNES_(snes),Vec_(x),Vec_(f),TS_(ts)) formSNESFunction(args) return FunctionEnd() # cdef PetscVec dx = NULL CHKERR( PetscObjectQuery( ts, b"@ts.vec_dot", &dx) ) # cdef PetscReal t = ts.ptime + ts.time_step cdef PetscReal a = 1.0/ts.time_step CHKERR( VecCopy(ts.vec_sol,dx) ) CHKERR( VecAXPBY(dx,+a,-a,x) ) CHKERR( TSComputeIFunction(ts,t,x,dx,f,PETSC_FALSE) ) return FunctionEnd() cdef PetscErrorCode SNESTSFormJacobian_Python( PetscSNES snes, PetscVec x, PetscMat A, PetscMat B, PetscTS ts, ) \ except IERR with gil: # cdef formSNESJacobian = PyTS(ts).formSNESJacobian if formSNESJacobian is not None: args = (SNES_(snes),Vec_(x),Mat_(A),Mat_(B),TS_(ts)) formSNESJacobian(*args) return FunctionEnd() # cdef PetscVec dx = NULL CHKERR( PetscObjectQuery( ts, b"@ts.vec_dot", &dx) ) # cdef PetscReal t = ts.ptime + ts.time_step cdef PetscReal a = 1.0/ts.time_step CHKERR( VecCopy(ts.vec_sol,dx) ) CHKERR( VecAXPBY(dx,+a,-a,x) ) CHKERR( TSComputeIJacobian(ts,t,x,dx,a,A,B,PETSC_FALSE) ) return FunctionEnd() cdef PetscErrorCode TSSolveStep_Python( PetscTS ts, PetscReal t, PetscVec x, ) \ except IERR with gil: FunctionBegin(b"TSSolveStep_Python") # cdef solveStep = PyTS(ts).solveStep if solveStep is not None: solveStep(TS_(ts), t, Vec_(x)) return FunctionEnd() # cdef PetscInt nits = 0, lits = 0 CHKERR( SNESSolve(ts.snes, NULL, x) ) CHKERR( SNESGetIterationNumber(ts.snes,&nits) ) CHKERR( SNESGetLinearSolveIterations(ts.snes,&lits) ) ts.snes_its += nits ts.ksp_its += lits return FunctionEnd() cdef PetscErrorCode TSAdaptStep_Python( PetscTS ts, PetscReal t, PetscVec x, PetscReal *nextdt, PetscBool *stepok, ) \ except IERR with gil: FunctionBegin(b"TSAdaptStep_Python") nextdt[0] = ts.time_step stepok[0] = PETSC_TRUE # cdef adaptStep = PyTS(ts).adaptStep if adaptStep is None: return FunctionEnd() cdef object retval cdef double dt cdef bint ok retval = adaptStep(TS_(ts), t, Vec_(x)) if retval is None: pass elif isinstance(retval, float): dt = retval nextdt[0] = dt stepok[0] = PETSC_TRUE elif isinstance(retval, bool): ok = retval nextdt[0] = ts.time_step stepok[0] = PETSC_TRUE if ok else PETSC_FALSE else: dt, ok = retval nextdt[0] = dt stepok[0] = PETSC_TRUE if ok else PETSC_FALSE return FunctionEnd() cdef PetscErrorCode TSStep_Python_default( PetscTS ts, ) \ except IERR with gil: FunctionBegin(b"TSStep_Python_default") cdef PetscVec vec_update = NULL CHKERR( PetscObjectQuery( ts, b"@ts.vec_update", &vec_update) ) # cdef PetscInt r = 0 cdef PetscReal tt = ts.ptime cdef PetscReal dt = ts.time_step cdef PetscBool accept = PETSC_TRUE cdef PetscBool stageok = PETSC_TRUE for r from 0 <= r < ts.max_reject: tt = ts.ptime + ts.time_step CHKERR( VecCopy(ts.vec_sol,vec_update) ) CHKERR( TSPreStage(ts,tt+dt) ) TSSolveStep_Python(ts,tt,vec_update) CHKERR( TSPostStage(ts,tt+dt,0,&vec_update) ); CHKERR( TSAdaptCheckStage(ts.adapt,ts,tt+dt,vec_update,&stageok) ); if not stageok: ts.reject += 1 continue TSAdaptStep_Python(ts,tt,vec_update,&dt,&accept) if not accept: ts.time_step = dt ts.reject += 1 continue CHKERR( VecCopy(vec_update,ts.vec_sol) ) ts.ptime += ts.time_step ts.time_step = dt break if (not stageok or not accept) and ts.reason == 0: ts.reason = TS_DIVERGED_STEP_REJECTED r # silent unused warning return FunctionEnd() # -------------------------------------------------------------------- cdef PetscErrorCode PetscPythonMonitorSet_Python( PetscObject obj_p, const_char *url_p, ) \ except IERR with gil: FunctionBegin(b"PetscPythonMonitorSet_Python") assert obj_p != NULL assert url_p != NULL assert url_p[0] != 0 # cdef PetscClassId classid = 0 CHKERR( PetscObjectGetClassId(obj_p,&classid) ) cdef type klass = PyPetscType_Lookup(classid) cdef Object ob = klass() ob.obj[0] = newRef(obj_p) # cdef url = bytes2str(url_p) if ':' in url: path, names = parse_url(url) else: path, names = url, 'monitor' module = load_module(path) for attr in names.split(','): monitor = getattr(module, attr) if isinstance(monitor, type): monitor = monitor(ob) ob.setMonitor(monitor) # return FunctionEnd() # -------------------------------------------------------------------- cdef extern from * nogil: char* MATPYTHON '"python"' char* KSPPYTHON '"python"' char* PCPYTHON '"python"' char* SNESPYTHON '"python"' char* TSPYTHON '"python"' ctypedef PetscErrorCode MatCreateFunction (PetscMat) except IERR ctypedef PetscErrorCode PCCreateFunction (PetscPC) except IERR ctypedef PetscErrorCode KSPCreateFunction (PetscKSP) except IERR ctypedef PetscErrorCode SNESCreateFunction (PetscSNES) except IERR ctypedef PetscErrorCode TSCreateFunction (PetscTS) except IERR PetscErrorCode MatRegister (char[],MatCreateFunction* ) PetscErrorCode PCRegister (char[],PCCreateFunction* ) PetscErrorCode KSPRegister (char[],KSPCreateFunction* ) PetscErrorCode SNESRegister (char[],SNESCreateFunction*) PetscErrorCode TSRegister (char[],TSCreateFunction* ) PetscErrorCode (*PetscPythonMonitorSet_C) \ (PetscObject, const_char[]) except IERR cdef public PetscErrorCode PetscPythonRegisterAll() except IERR: FunctionBegin(b"PetscPythonRegisterAll") # Python subtypes CHKERR( MatRegister ( MATPYTHON, MatCreate_Python ) ) CHKERR( PCRegister ( PCPYTHON, PCCreate_Python ) ) CHKERR( KSPRegister ( KSPPYTHON, KSPCreate_Python ) ) CHKERR( SNESRegister( SNESPYTHON, SNESCreate_Python ) ) CHKERR( TSRegister ( TSPYTHON, TSCreate_Python ) ) # Python monitors global PetscPythonMonitorSet_C PetscPythonMonitorSet_C = PetscPythonMonitorSet_Python return FunctionEnd() # -------------------------------------------------------------------- # Cython 0.16 - Function prototypes for unused entries are not emitted # despite them being marked as 'public'. The lack of explicit extern # "C" binding causes trouble with C++ builds of PETSc. The bogus calls # below trick Cython to treat all these entries as used. if PETSC_FALSE: import_libpetsc4py() MatPythonGetContext(NULL,NULL) MatPythonSetContext(NULL,NULL) PCPythonGetContext(NULL,NULL) PCPythonSetContext(NULL,NULL) KSPPythonGetContext(NULL,NULL) KSPPythonSetContext(NULL,NULL) SNESPythonGetContext(NULL,NULL) SNESPythonSetContext(NULL,NULL) TSPythonGetContext(NULL,NULL) TSPythonSetContext(NULL,NULL) PetscPythonRegisterAll() # -------------------------------------------------------------------- petsc4py-3.7.0/src/libpetsc4py/libpetsc4py.c0000644000175000001440000401120112711405032021512 0ustar dalcinlusers00000000000000/* Generated by Cython 0.24 */ #define PY_SSIZE_T_CLEAN #include "Python.h" #ifndef Py_PYTHON_H #error Python headers needed to compile C extensions, please install development version of Python. #elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03020000) #error Cython requires Python 2.6+ or Python 3.2+. #else #define CYTHON_ABI "0_24" #include #ifndef offsetof #define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) #endif #if !defined(WIN32) && !defined(MS_WINDOWS) #ifndef __stdcall #define __stdcall #endif #ifndef __cdecl #define __cdecl #endif #ifndef __fastcall #define __fastcall #endif #endif #ifndef DL_IMPORT #define DL_IMPORT(t) t #endif #ifndef DL_EXPORT #define DL_EXPORT(t) t #endif #ifndef PY_LONG_LONG #define PY_LONG_LONG LONG_LONG #endif #ifndef Py_HUGE_VAL #define Py_HUGE_VAL HUGE_VAL #endif #ifdef PYPY_VERSION #define CYTHON_COMPILING_IN_PYPY 1 #define CYTHON_COMPILING_IN_CPYTHON 0 #else #define CYTHON_COMPILING_IN_PYPY 0 #define CYTHON_COMPILING_IN_CPYTHON 1 #endif #if !defined(CYTHON_USE_PYLONG_INTERNALS) && CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x02070000 #define CYTHON_USE_PYLONG_INTERNALS 1 #endif #if CYTHON_USE_PYLONG_INTERNALS #include "longintrepr.h" #undef SHIFT #undef BASE #undef MASK #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX < 0x02070600 && !defined(Py_OptimizeFlag) #define Py_OptimizeFlag 0 #endif #define __PYX_BUILD_PY_SSIZE_T "n" #define CYTHON_FORMAT_SSIZE_T "z" #if PY_MAJOR_VERSION < 3 #define __Pyx_BUILTIN_MODULE_NAME "__builtin__" #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\ PyCode_New(a+k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) #define __Pyx_DefaultClassType PyClass_Type #else #define __Pyx_BUILTIN_MODULE_NAME "builtins" #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\ PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) #define __Pyx_DefaultClassType PyType_Type #endif #ifndef Py_TPFLAGS_CHECKTYPES #define Py_TPFLAGS_CHECKTYPES 0 #endif #ifndef Py_TPFLAGS_HAVE_INDEX #define Py_TPFLAGS_HAVE_INDEX 0 #endif #ifndef Py_TPFLAGS_HAVE_NEWBUFFER #define Py_TPFLAGS_HAVE_NEWBUFFER 0 #endif #ifndef Py_TPFLAGS_HAVE_FINALIZE #define Py_TPFLAGS_HAVE_FINALIZE 0 #endif #if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND) #define CYTHON_PEP393_ENABLED 1 #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ?\ 0 : _PyUnicode_Ready((PyObject *)(op))) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i) #define __Pyx_PyUnicode_KIND(u) PyUnicode_KIND(u) #define __Pyx_PyUnicode_DATA(u) PyUnicode_DATA(u) #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i) #define __Pyx_PyUnicode_IS_TRUE(u) (0 != (likely(PyUnicode_IS_READY(u)) ? 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-value : value) #endif static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject*); static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); #define __Pyx_PyByteArray_FromString(s) PyByteArray_FromStringAndSize((const char*)s, strlen((const char*)s)) #define __Pyx_PyByteArray_FromStringAndSize(s, l) PyByteArray_FromStringAndSize((const char*)s, l) #define __Pyx_PyBytes_FromString PyBytes_FromString #define __Pyx_PyBytes_FromStringAndSize PyBytes_FromStringAndSize static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*); #if PY_MAJOR_VERSION < 3 #define __Pyx_PyStr_FromString __Pyx_PyBytes_FromString #define __Pyx_PyStr_FromStringAndSize __Pyx_PyBytes_FromStringAndSize #else #define __Pyx_PyStr_FromString __Pyx_PyUnicode_FromString #define __Pyx_PyStr_FromStringAndSize __Pyx_PyUnicode_FromStringAndSize #endif #define __Pyx_PyObject_AsSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_AsUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_FromCString(s) __Pyx_PyObject_FromString((const char*)s) #define __Pyx_PyBytes_FromCString(s) __Pyx_PyBytes_FromString((const char*)s) #define __Pyx_PyByteArray_FromCString(s) __Pyx_PyByteArray_FromString((const char*)s) #define __Pyx_PyStr_FromCString(s) __Pyx_PyStr_FromString((const char*)s) #define __Pyx_PyUnicode_FromCString(s) __Pyx_PyUnicode_FromString((const char*)s) #if PY_MAJOR_VERSION < 3 static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) { const Py_UNICODE *u_end = u; while (*u_end++) ; return (size_t)(u_end - u - 1); } #else #define __Pyx_Py_UNICODE_strlen Py_UNICODE_strlen #endif #define __Pyx_PyUnicode_FromUnicode(u) PyUnicode_FromUnicode(u, __Pyx_Py_UNICODE_strlen(u)) #define __Pyx_PyUnicode_FromUnicodeAndLength PyUnicode_FromUnicode #define __Pyx_PyUnicode_AsUnicode PyUnicode_AsUnicode #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) #define __Pyx_Owned_Py_None(b) __Pyx_NewRef(Py_None) #define __Pyx_PyBool_FromLong(b) ((b) ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False)) static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*); static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x); static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*); static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t); #if CYTHON_COMPILING_IN_CPYTHON #define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x)) #else #define __pyx_PyFloat_AsDouble(x) PyFloat_AsDouble(x) #endif #define __pyx_PyFloat_AsFloat(x) ((float) __pyx_PyFloat_AsDouble(x)) #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyNumber_Int(x) (PyLong_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Long(x)) #else #define __Pyx_PyNumber_Int(x) (PyInt_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Int(x)) #endif #define __Pyx_PyNumber_Float(x) (PyFloat_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Float(x)) #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII static int __Pyx_sys_getdefaultencoding_not_ascii; static int __Pyx_init_sys_getdefaultencoding_params(void) { PyObject* sys; PyObject* default_encoding = NULL; PyObject* ascii_chars_u = NULL; PyObject* ascii_chars_b = NULL; const char* default_encoding_c; sys = PyImport_ImportModule("sys"); if (!sys) goto bad; default_encoding = PyObject_CallMethod(sys, (char*) "getdefaultencoding", NULL); Py_DECREF(sys); if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); if (!default_encoding_c) goto bad; if (strcmp(default_encoding_c, "ascii") == 0) { __Pyx_sys_getdefaultencoding_not_ascii = 0; } else { char ascii_chars[128]; int c; for (c = 0; c < 128; c++) { ascii_chars[c] = c; } __Pyx_sys_getdefaultencoding_not_ascii = 1; ascii_chars_u = PyUnicode_DecodeASCII(ascii_chars, 128, NULL); if (!ascii_chars_u) goto bad; ascii_chars_b = PyUnicode_AsEncodedString(ascii_chars_u, default_encoding_c, NULL); if (!ascii_chars_b || !PyBytes_Check(ascii_chars_b) || memcmp(ascii_chars, PyBytes_AS_STRING(ascii_chars_b), 128) != 0) { PyErr_Format( PyExc_ValueError, "This module compiled with c_string_encoding=ascii, but default encoding '%.200s' is not a superset of ascii.", default_encoding_c); goto bad; } Py_DECREF(ascii_chars_u); Py_DECREF(ascii_chars_b); } Py_DECREF(default_encoding); return 0; bad: Py_XDECREF(default_encoding); Py_XDECREF(ascii_chars_u); Py_XDECREF(ascii_chars_b); return -1; } #endif #if __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT && PY_MAJOR_VERSION >= 3 #define __Pyx_PyUnicode_FromStringAndSize(c_str, size) PyUnicode_DecodeUTF8(c_str, size, NULL) #else #define __Pyx_PyUnicode_FromStringAndSize(c_str, size) PyUnicode_Decode(c_str, size, __PYX_DEFAULT_STRING_ENCODING, NULL) #if __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT static char* __PYX_DEFAULT_STRING_ENCODING; static int __Pyx_init_sys_getdefaultencoding_params(void) { PyObject* sys; PyObject* default_encoding = NULL; char* default_encoding_c; sys = PyImport_ImportModule("sys"); if (!sys) goto bad; default_encoding = PyObject_CallMethod(sys, (char*) (const char*) "getdefaultencoding", NULL); Py_DECREF(sys); if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); if (!default_encoding_c) goto bad; __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c)); if (!__PYX_DEFAULT_STRING_ENCODING) goto bad; strcpy(__PYX_DEFAULT_STRING_ENCODING, default_encoding_c); Py_DECREF(default_encoding); return 0; bad: Py_XDECREF(default_encoding); return -1; } #endif #endif /* Test for GCC > 2.95 */ #if defined(__GNUC__) && (__GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95))) #define likely(x) __builtin_expect(!!(x), 1) #define unlikely(x) __builtin_expect(!!(x), 0) #else /* !__GNUC__ or GCC < 2.95 */ #define likely(x) (x) #define unlikely(x) (x) #endif /* __GNUC__ */ static PyObject *__pyx_m; static PyObject *__pyx_d; static PyObject *__pyx_b; static PyObject *__pyx_empty_tuple; static PyObject *__pyx_empty_bytes; static PyObject *__pyx_empty_unicode; static int __pyx_lineno; static int __pyx_clineno = 0; static const char * __pyx_cfilenm= __FILE__; static const char *__pyx_filename; static const char *__pyx_f[] = { "libpetsc4py/libpetsc4py.pyx", "include/petsc4py/PETSc.pxd", }; /*--- Type declarations ---*/ struct PyPetscCommObject; struct PyPetscObjectObject; struct PyPetscViewerObject; struct PyPetscRandomObject; struct PyPetscISObject; struct PyPetscLGMapObject; struct PyPetscSFObject; struct PyPetscVecObject; struct PyPetscScatterObject; struct PyPetscSectionObject; struct PyPetscMatObject; struct PyPetscNullSpaceObject; struct PyPetscPCObject; struct PyPetscKSPObject; struct PyPetscSNESObject; struct PyPetscTSObject; struct PyPetscTAOObject; struct PyPetscAOObject; struct PyPetscDMObject; struct PyPetscPartitionerObject; struct __pyx_obj_11libpetsc4py__PyObj; struct __pyx_obj_11libpetsc4py__PyMat; struct __pyx_obj_11libpetsc4py__PyPC; struct __pyx_obj_11libpetsc4py__PyKSP; struct __pyx_obj_11libpetsc4py__PySNES; struct __pyx_obj_11libpetsc4py__PyTS; /* "petsc4py/PETSc.pxd":70 * # -------------------------------------------------------------------- * * ctypedef public api class Comm [ # <<<<<<<<<<<<<< * type PyPetscComm_Type, * object PyPetscCommObject, */ struct PyPetscCommObject { PyObject_HEAD MPI_Comm comm; int isdup; PyObject *base; }; typedef struct PyPetscCommObject PyPetscCommObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscComm_Type; /* "petsc4py/PETSc.pxd":78 * cdef object base * * ctypedef public api class Object [ # <<<<<<<<<<<<<< * type PyPetscObject_Type, * object PyPetscObjectObject, */ struct PyPetscObjectObject { PyObject_HEAD struct __pyx_vtabstruct_8petsc4py_5PETSc_Object *__pyx_vtab; PyObject *__weakref__; PyObject *__pyx___dummy__; PetscObject oval; PetscObject *obj; }; typedef struct PyPetscObjectObject PyPetscObjectObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscObject_Type; /* "petsc4py/PETSc.pxd":90 * cdef object get_dict(self) * * ctypedef public api class Viewer(Object) [ # <<<<<<<<<<<<<< * type PyPetscViewer_Type, * object PyPetscViewerObject, */ struct PyPetscViewerObject { struct PyPetscObjectObject __pyx_base; PetscViewer vwr; }; typedef struct PyPetscViewerObject PyPetscViewerObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscViewer_Type; /* "petsc4py/PETSc.pxd":96 * cdef PetscViewer vwr * * ctypedef public api class Random(Object) [ # <<<<<<<<<<<<<< * type PyPetscRandom_Type, * object PyPetscRandomObject, */ struct PyPetscRandomObject { struct PyPetscObjectObject __pyx_base; PetscRandom rnd; }; typedef struct PyPetscRandomObject PyPetscRandomObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscRandom_Type; /* "petsc4py/PETSc.pxd":102 * cdef PetscRandom rnd * * ctypedef public api class IS(Object) [ # <<<<<<<<<<<<<< * type PyPetscIS_Type, * object PyPetscISObject, */ struct PyPetscISObject { struct PyPetscObjectObject __pyx_base; IS iset; }; typedef struct PyPetscISObject PyPetscISObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscIS_Type; /* "petsc4py/PETSc.pxd":108 * cdef PetscIS iset * * ctypedef public api class LGMap(Object) [ # <<<<<<<<<<<<<< * type PyPetscLGMap_Type, * object PyPetscLGMapObject, */ struct PyPetscLGMapObject { struct PyPetscObjectObject __pyx_base; ISLocalToGlobalMapping lgm; }; typedef struct PyPetscLGMapObject PyPetscLGMapObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscLGMap_Type; /* "petsc4py/PETSc.pxd":114 * cdef PetscLGMap lgm * * ctypedef public api class SF(Object) [ # <<<<<<<<<<<<<< * type PyPetscSF_Type, * object PyPetscSFObject, */ struct PyPetscSFObject { struct PyPetscObjectObject __pyx_base; PetscSF sf; }; typedef struct PyPetscSFObject PyPetscSFObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscSF_Type; /* "petsc4py/PETSc.pxd":120 * cdef PetscSF sf * * ctypedef public api class Vec(Object) [ # <<<<<<<<<<<<<< * type PyPetscVec_Type, * object PyPetscVecObject, */ struct PyPetscVecObject { struct PyPetscObjectObject __pyx_base; Vec vec; }; typedef struct PyPetscVecObject PyPetscVecObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscVec_Type; /* "petsc4py/PETSc.pxd":126 * cdef PetscVec vec * * ctypedef public api class Scatter(Object) [ # <<<<<<<<<<<<<< * type PyPetscScatter_Type, * object PyPetscScatterObject, */ struct PyPetscScatterObject { struct PyPetscObjectObject __pyx_base; VecScatter sct; }; typedef struct PyPetscScatterObject PyPetscScatterObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscScatter_Type; /* "petsc4py/PETSc.pxd":132 * cdef PetscScatter sct * * ctypedef public api class Section(Object) [ # <<<<<<<<<<<<<< * type PyPetscSection_Type, * object PyPetscSectionObject, */ struct PyPetscSectionObject { struct PyPetscObjectObject __pyx_base; PetscSection sec; }; typedef struct PyPetscSectionObject PyPetscSectionObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscSection_Type; /* "petsc4py/PETSc.pxd":138 * cdef PetscSection sec * * ctypedef public api class Mat(Object) [ # <<<<<<<<<<<<<< * type PyPetscMat_Type, * object PyPetscMatObject, */ struct PyPetscMatObject { struct PyPetscObjectObject __pyx_base; Mat mat; }; typedef struct PyPetscMatObject PyPetscMatObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscMat_Type; /* "petsc4py/PETSc.pxd":144 * cdef PetscMat mat * * ctypedef public api class NullSpace(Object) [ # <<<<<<<<<<<<<< * type PyPetscNullSpace_Type, * object PyPetscNullSpaceObject, */ struct PyPetscNullSpaceObject { struct PyPetscObjectObject __pyx_base; MatNullSpace nsp; }; typedef struct PyPetscNullSpaceObject PyPetscNullSpaceObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscNullSpace_Type; /* "petsc4py/PETSc.pxd":150 * cdef PetscNullSpace nsp * * ctypedef public api class PC(Object) [ # <<<<<<<<<<<<<< * type PyPetscPC_Type, * object PyPetscPCObject, */ struct PyPetscPCObject { struct PyPetscObjectObject __pyx_base; PC pc; }; typedef struct PyPetscPCObject PyPetscPCObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscPC_Type; /* "petsc4py/PETSc.pxd":156 * cdef PetscPC pc * * ctypedef public api class KSP(Object) [ # <<<<<<<<<<<<<< * type PyPetscKSP_Type, * object PyPetscKSPObject, */ struct PyPetscKSPObject { struct PyPetscObjectObject __pyx_base; KSP ksp; }; typedef struct PyPetscKSPObject PyPetscKSPObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscKSP_Type; /* "petsc4py/PETSc.pxd":162 * cdef PetscKSP ksp * * ctypedef public api class SNES(Object) [ # <<<<<<<<<<<<<< * type PyPetscSNES_Type, * object PyPetscSNESObject, */ struct PyPetscSNESObject { struct PyPetscObjectObject __pyx_base; SNES snes; }; typedef struct PyPetscSNESObject PyPetscSNESObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscSNES_Type; /* "petsc4py/PETSc.pxd":168 * cdef PetscSNES snes * * ctypedef public api class TS(Object) [ # <<<<<<<<<<<<<< * type PyPetscTS_Type, * object PyPetscTSObject, */ struct PyPetscTSObject { struct PyPetscObjectObject __pyx_base; TS ts; }; typedef struct PyPetscTSObject PyPetscTSObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscTS_Type; /* "petsc4py/PETSc.pxd":174 * cdef PetscTS ts * * ctypedef public api class TAO(Object) [ # <<<<<<<<<<<<<< * type PyPetscTAO_Type, * object PyPetscTAOObject, */ struct PyPetscTAOObject { struct PyPetscObjectObject __pyx_base; Tao tao; }; typedef struct PyPetscTAOObject PyPetscTAOObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscTAO_Type; /* "petsc4py/PETSc.pxd":180 * cdef PetscTAO tao * * ctypedef public api class AO(Object) [ # <<<<<<<<<<<<<< * type PyPetscAO_Type, * object PyPetscAOObject, */ struct PyPetscAOObject { struct PyPetscObjectObject __pyx_base; AO ao; }; typedef struct PyPetscAOObject PyPetscAOObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscAO_Type; /* "petsc4py/PETSc.pxd":186 * cdef PetscAO ao * * ctypedef public api class DM(Object) [ # <<<<<<<<<<<<<< * type PyPetscDM_Type, * object PyPetscDMObject, */ struct PyPetscDMObject { struct PyPetscObjectObject __pyx_base; DM dm; }; typedef struct PyPetscDMObject PyPetscDMObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscDM_Type; /* "petsc4py/PETSc.pxd":192 * cdef PetscDM dm * * ctypedef public api class Partitioner(Object) [ # <<<<<<<<<<<<<< * type PyPetscPartitioner_Type, * object PyPetscPartitionerObject, */ struct PyPetscPartitionerObject { struct PyPetscObjectObject __pyx_base; PetscPartitioner part; }; typedef struct PyPetscPartitionerObject PyPetscPartitionerObject; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscPartitioner_Type; /* "libpetsc4py.pyx":284 * * @cython.internal * cdef class _PyObj: # <<<<<<<<<<<<<< * * cdef object self */ struct __pyx_obj_11libpetsc4py__PyObj { PyObject_HEAD struct __pyx_vtabstruct_11libpetsc4py__PyObj *__pyx_vtab; PyObject *self; PyObject *name; }; /* "libpetsc4py.pyx":512 * * @cython.internal * cdef class _PyMat(_PyObj): pass # <<<<<<<<<<<<<< * cdef inline _PyMat PyMat(PetscMat mat): * if mat != NULL and mat.data != NULL: */ struct __pyx_obj_11libpetsc4py__PyMat { struct __pyx_obj_11libpetsc4py__PyObj __pyx_base; }; /* "libpetsc4py.pyx":1152 * * @cython.internal * cdef class _PyPC(_PyObj): pass # <<<<<<<<<<<<<< * cdef inline _PyPC PyPC(PetscPC pc): * if pc != NULL and pc.data != NULL: */ struct __pyx_obj_11libpetsc4py__PyPC { struct __pyx_obj_11libpetsc4py__PyObj __pyx_base; }; /* "libpetsc4py.pyx":1427 * * @cython.internal * cdef class _PyKSP(_PyObj): pass # <<<<<<<<<<<<<< * cdef inline _PyKSP PyKSP(PetscKSP ksp): * if ksp != NULL and ksp.data != NULL: */ struct __pyx_obj_11libpetsc4py__PyKSP { struct __pyx_obj_11libpetsc4py__PyObj __pyx_base; }; /* "libpetsc4py.pyx":1782 * * @cython.internal * cdef class _PySNES(_PyObj): pass # <<<<<<<<<<<<<< * cdef inline _PySNES PySNES(PetscSNES snes): * if snes != NULL and snes.data != NULL: */ struct __pyx_obj_11libpetsc4py__PySNES { struct __pyx_obj_11libpetsc4py__PyObj __pyx_base; }; /* "libpetsc4py.pyx":2117 * * @cython.internal * cdef class _PyTS(_PyObj): pass # <<<<<<<<<<<<<< * cdef inline _PyTS PyTS(PetscTS ts): * if ts != NULL and ts.data != NULL: */ struct __pyx_obj_11libpetsc4py__PyTS { struct __pyx_obj_11libpetsc4py__PyObj __pyx_base; }; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscObject_Type; /* "petsc4py/PETSc.pxd":78 * cdef object base * * ctypedef public api class Object [ # <<<<<<<<<<<<<< * type PyPetscObject_Type, * object PyPetscObjectObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Object { PyObject *(*get_attr)(struct PyPetscObjectObject *, char *); PyObject *(*set_attr)(struct PyPetscObjectObject *, char *, PyObject *); PyObject *(*get_dict)(struct PyPetscObjectObject *); }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Object *__pyx_vtabptr_8petsc4py_5PETSc_Object; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscViewer_Type; /* "petsc4py/PETSc.pxd":90 * cdef object get_dict(self) * * ctypedef public api class Viewer(Object) [ # <<<<<<<<<<<<<< * type PyPetscViewer_Type, * object PyPetscViewerObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Viewer { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Viewer *__pyx_vtabptr_8petsc4py_5PETSc_Viewer; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscRandom_Type; /* "petsc4py/PETSc.pxd":96 * cdef PetscViewer vwr * * ctypedef public api class Random(Object) [ # <<<<<<<<<<<<<< * type PyPetscRandom_Type, * object PyPetscRandomObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Random { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Random *__pyx_vtabptr_8petsc4py_5PETSc_Random; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscIS_Type; /* "petsc4py/PETSc.pxd":102 * cdef PetscRandom rnd * * ctypedef public api class IS(Object) [ # <<<<<<<<<<<<<< * type PyPetscIS_Type, * object PyPetscISObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_IS { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_IS *__pyx_vtabptr_8petsc4py_5PETSc_IS; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscLGMap_Type; /* "petsc4py/PETSc.pxd":108 * cdef PetscIS iset * * ctypedef public api class LGMap(Object) [ # <<<<<<<<<<<<<< * type PyPetscLGMap_Type, * object PyPetscLGMapObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_LGMap { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_LGMap *__pyx_vtabptr_8petsc4py_5PETSc_LGMap; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscSF_Type; /* "petsc4py/PETSc.pxd":114 * cdef PetscLGMap lgm * * ctypedef public api class SF(Object) [ # <<<<<<<<<<<<<< * type PyPetscSF_Type, * object PyPetscSFObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_SF { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_SF *__pyx_vtabptr_8petsc4py_5PETSc_SF; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscVec_Type; /* "petsc4py/PETSc.pxd":120 * cdef PetscSF sf * * ctypedef public api class Vec(Object) [ # <<<<<<<<<<<<<< * type PyPetscVec_Type, * object PyPetscVecObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Vec { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Vec *__pyx_vtabptr_8petsc4py_5PETSc_Vec; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscScatter_Type; /* "petsc4py/PETSc.pxd":126 * cdef PetscVec vec * * ctypedef public api class Scatter(Object) [ # <<<<<<<<<<<<<< * type PyPetscScatter_Type, * object PyPetscScatterObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Scatter { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Scatter *__pyx_vtabptr_8petsc4py_5PETSc_Scatter; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscSection_Type; /* "petsc4py/PETSc.pxd":132 * cdef PetscScatter sct * * ctypedef public api class Section(Object) [ # <<<<<<<<<<<<<< * type PyPetscSection_Type, * object PyPetscSectionObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Section { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Section *__pyx_vtabptr_8petsc4py_5PETSc_Section; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscMat_Type; /* "petsc4py/PETSc.pxd":138 * cdef PetscSection sec * * ctypedef public api class Mat(Object) [ # <<<<<<<<<<<<<< * type PyPetscMat_Type, * object PyPetscMatObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_Mat { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_Mat *__pyx_vtabptr_8petsc4py_5PETSc_Mat; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscNullSpace_Type; /* "petsc4py/PETSc.pxd":144 * cdef PetscMat mat * * ctypedef public api class NullSpace(Object) [ # <<<<<<<<<<<<<< * type PyPetscNullSpace_Type, * object PyPetscNullSpaceObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_NullSpace { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_NullSpace *__pyx_vtabptr_8petsc4py_5PETSc_NullSpace; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscPC_Type; /* "petsc4py/PETSc.pxd":150 * cdef PetscNullSpace nsp * * ctypedef public api class PC(Object) [ # <<<<<<<<<<<<<< * type PyPetscPC_Type, * object PyPetscPCObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_PC { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_PC *__pyx_vtabptr_8petsc4py_5PETSc_PC; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscKSP_Type; /* "petsc4py/PETSc.pxd":156 * cdef PetscPC pc * * ctypedef public api class KSP(Object) [ # <<<<<<<<<<<<<< * type PyPetscKSP_Type, * object PyPetscKSPObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_KSP { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_KSP *__pyx_vtabptr_8petsc4py_5PETSc_KSP; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscSNES_Type; /* "petsc4py/PETSc.pxd":162 * cdef PetscKSP ksp * * ctypedef public api class SNES(Object) [ # <<<<<<<<<<<<<< * type PyPetscSNES_Type, * object PyPetscSNESObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_SNES { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_SNES *__pyx_vtabptr_8petsc4py_5PETSc_SNES; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscTS_Type; /* "petsc4py/PETSc.pxd":168 * cdef PetscSNES snes * * ctypedef public api class TS(Object) [ # <<<<<<<<<<<<<< * type PyPetscTS_Type, * object PyPetscTSObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_TS { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_TS *__pyx_vtabptr_8petsc4py_5PETSc_TS; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscTAO_Type; /* "petsc4py/PETSc.pxd":174 * cdef PetscTS ts * * ctypedef public api class TAO(Object) [ # <<<<<<<<<<<<<< * type PyPetscTAO_Type, * object PyPetscTAOObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_TAO { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; }; static struct __pyx_vtabstruct_8petsc4py_5PETSc_TAO *__pyx_vtabptr_8petsc4py_5PETSc_TAO; __PYX_EXTERN_C DL_EXPORT(PyTypeObject) PyPetscAO_Type; /* "petsc4py/PETSc.pxd":180 * cdef PetscTAO tao * * ctypedef public api class AO(Object) [ # <<<<<<<<<<<<<< * type PyPetscAO_Type, * object PyPetscAOObject, */ struct __pyx_vtabstruct_8petsc4py_5PETSc_AO { struct __pyx_vtabstruct_8petsc4py_5PETSc_Object __pyx_base; 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/* decode_c_bytes.proto */ static CYTHON_INLINE PyObject* __Pyx_decode_c_bytes( const char* cstring, Py_ssize_t length, Py_ssize_t start, Py_ssize_t stop, const char* encoding, const char* errors, PyObject* (*decode_func)(const char *s, Py_ssize_t size, const char *errors)); /* decode_bytes.proto */ static CYTHON_INLINE PyObject* __Pyx_decode_bytes( PyObject* string, Py_ssize_t start, Py_ssize_t stop, const char* encoding, const char* errors, PyObject* (*decode_func)(const char *s, Py_ssize_t size, const char *errors)) { return __Pyx_decode_c_bytes( PyBytes_AS_STRING(string), PyBytes_GET_SIZE(string), start, stop, encoding, errors, decode_func); } /* PyObjectCall.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw); #else #define __Pyx_PyObject_Call(func, arg, kw) PyObject_Call(func, arg, kw) #endif /* RaiseTooManyValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected); /* RaiseNeedMoreValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index); /* IterFinish.proto */ static CYTHON_INLINE int __Pyx_IterFinish(void); /* UnpackItemEndCheck.proto */ static int __Pyx_IternextUnpackEndCheck(PyObject *retval, Py_ssize_t expected); /* PyDictContains.proto */ static CYTHON_INLINE int __Pyx_PyDict_ContainsTF(PyObject* item, PyObject* dict, int eq) { int result = PyDict_Contains(dict, item); return unlikely(result < 0) ? result : (result == (eq == Py_EQ)); } /* DictGetItem.proto */ #if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { PyObject *value; value = PyDict_GetItemWithError(d, key); if (unlikely(!value)) { if (!PyErr_Occurred()) { PyObject* args = PyTuple_Pack(1, key); if (likely(args)) PyErr_SetObject(PyExc_KeyError, args); Py_XDECREF(args); } return NULL; } Py_INCREF(value); return value; } #else #define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) #endif /* PyObjectSetAttrStr.proto */ #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_PyObject_DelAttrStr(o,n) __Pyx_PyObject_SetAttrStr(o,n,NULL) static CYTHON_INLINE int __Pyx_PyObject_SetAttrStr(PyObject* obj, PyObject* attr_name, PyObject* value) { PyTypeObject* tp = Py_TYPE(obj); if (likely(tp->tp_setattro)) return tp->tp_setattro(obj, attr_name, value); #if PY_MAJOR_VERSION < 3 if (likely(tp->tp_setattr)) return tp->tp_setattr(obj, PyString_AS_STRING(attr_name), value); #endif return PyObject_SetAttr(obj, attr_name, value); } #else #define __Pyx_PyObject_DelAttrStr(o,n) PyObject_DelAttr(o,n) #define __Pyx_PyObject_SetAttrStr(o,n,v) PyObject_SetAttr(o,n,v) #endif /* PyObjectCallMethO.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg); #endif /* PyObjectCallOneArg.proto */ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg); /* PyObjectCallNoArg.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallNoArg(PyObject *func); #else #define __Pyx_PyObject_CallNoArg(func) __Pyx_PyObject_Call(func, __pyx_empty_tuple, NULL) #endif /* GetException.proto */ #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_GetException(type, value, tb) __Pyx__GetException(__pyx_tstate, type, value, tb) static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); #else static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); #endif /* SwapException.proto */ #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_ExceptionSwap(type, value, tb) __Pyx__ExceptionSwap(__pyx_tstate, type, value, tb) static CYTHON_INLINE void __Pyx__ExceptionSwap(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); #else static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb); #endif /* SaveResetException.proto */ #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_ExceptionSave(type, value, tb) __Pyx__ExceptionSave(__pyx_tstate, type, value, tb) static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); #define __Pyx_ExceptionReset(type, value, tb) __Pyx__ExceptionReset(__pyx_tstate, type, value, tb) static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); #else #define __Pyx_ExceptionSave(type, value, tb) PyErr_GetExcInfo(type, value, tb) #define __Pyx_ExceptionReset(type, value, tb) PyErr_SetExcInfo(type, value, tb) #endif /* GetAttr.proto */ static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *, PyObject *); /* GetAttr3.proto */ static CYTHON_INLINE PyObject *__Pyx_GetAttr3(PyObject *, PyObject *, PyObject *); /* PySequenceContains.proto */ static CYTHON_INLINE int __Pyx_PySequence_ContainsTF(PyObject* item, PyObject* seq, int eq) { int result = PySequence_Contains(seq, item); return unlikely(result < 0) ? result : (result == (eq == Py_EQ)); } /* SetVTable.proto */ static int __Pyx_SetVtable(PyObject *dict, void *vtable); /* GetVTable.proto */ static void* __Pyx_GetVtable(PyObject *dict); /* Import.proto */ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); /* ImportFrom.proto */ static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name); /* PyIdentifierFromString.proto */ #if !defined(__Pyx_PyIdentifier_FromString) #if PY_MAJOR_VERSION < 3 #define __Pyx_PyIdentifier_FromString(s) PyString_FromString(s) #else #define __Pyx_PyIdentifier_FromString(s) PyUnicode_FromString(s) #endif #endif /* ModuleImport.proto */ static PyObject *__Pyx_ImportModule(const char *name); /* RegisterModuleCleanup.proto */ static void __pyx_module_cleanup(PyObject *self); static int __Pyx_RegisterCleanup(void); /* CodeObjectCache.proto */ typedef struct { PyCodeObject* code_object; int code_line; } __Pyx_CodeObjectCacheEntry; struct __Pyx_CodeObjectCache { int count; int max_count; __Pyx_CodeObjectCacheEntry* entries; }; static struct __Pyx_CodeObjectCache __pyx_code_cache = {0,0,NULL}; static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line); static PyCodeObject *__pyx_find_code_object(int code_line); static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object); /* AddTraceback.proto */ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename); /* None.proto */ static CYTHON_INLINE int __Pyx_ErrOccurredWithGIL(void); /* proto */ /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscInt(PetscInt value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value); /* PyExec.proto */ static PyObject* __Pyx_PyExec3(PyObject*, PyObject*, PyObject*); static CYTHON_INLINE PyObject* __Pyx_PyExec2(PyObject*, PyObject*); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscBool(PetscBool value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatSORType(MatSORType value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_NormType(NormType value); /* CIntFromPy.proto */ static CYTHON_INLINE PetscInt __Pyx_PyInt_As_PetscInt(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); /* CheckBinaryVersion.proto */ static int __Pyx_check_binary_version(void); /* TypeImport.proto */ static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict); /* FunctionImport.proto */ static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig); /* InitStrings.proto */ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); static int __pyx_f_11libpetsc4py_6_PyObj_setcontext(struct __pyx_obj_11libpetsc4py__PyObj *__pyx_v_self, void *__pyx_v_ctx, struct PyPetscObjectObject *__pyx_v_base); /* proto*/ static int __pyx_f_11libpetsc4py_6_PyObj_getcontext(struct __pyx_obj_11libpetsc4py__PyObj *__pyx_v_self, void **__pyx_v_ctx); /* proto*/ static int __pyx_f_11libpetsc4py_6_PyObj_setname(struct __pyx_obj_11libpetsc4py__PyObj *__pyx_v_self, char *__pyx_v_name); /* proto*/ static char *__pyx_f_11libpetsc4py_6_PyObj_getname(struct __pyx_obj_11libpetsc4py__PyObj *__pyx_v_self); /* proto*/ /* Module declarations from 'cython' */ /* Module declarations from 'petsc4py.PETSc' */ static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Comm = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Object = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Viewer = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Random = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_IS = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_LGMap = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_SF = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Vec = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Scatter = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Section = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Mat = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_NullSpace = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_PC = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_KSP = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_SNES = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_TS = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_TAO = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_AO = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_DM = 0; static PyTypeObject *__pyx_ptype_8petsc4py_5PETSc_Partitioner = 0; static PyTypeObject *(*__pyx_f_8petsc4py_5PETSc_PyPetscType_Lookup)(int); /*proto*/ /* Module declarations from 'libpetsc4py' */ static PyTypeObject *__pyx_ptype_11libpetsc4py__PyObj = 0; static PyTypeObject *__pyx_ptype_11libpetsc4py__PyMat = 0; static PyTypeObject *__pyx_ptype_11libpetsc4py__PyPC = 0; static PyTypeObject *__pyx_ptype_11libpetsc4py__PyKSP = 0; static PyTypeObject *__pyx_ptype_11libpetsc4py__PySNES = 0; static PyTypeObject *__pyx_ptype_11libpetsc4py__PyTS = 0; static char *__pyx_v_11libpetsc4py_FUNCT; static char *__pyx_v_11libpetsc4py_fstack[0x400]; static int __pyx_v_11libpetsc4py_istack; static PyObject *__pyx_v_11libpetsc4py_PetscError = 0; static PyObject *__pyx_v_11libpetsc4py_module_cache = 0; __PYX_EXTERN_C DL_EXPORT(int) import_libpetsc4py(void); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_11libpetsc4py_toInt(PetscInt); /*proto*/ static CYTHON_INLINE PetscInt __pyx_f_11libpetsc4py_asInt(PyObject *); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_11libpetsc4py_toReal(PetscReal); /*proto*/ static CYTHON_INLINE PetscReal __pyx_f_11libpetsc4py_asReal(PyObject *); /*proto*/ static CYTHON_INLINE void __pyx_f_11libpetsc4py_FunctionBegin(char *); /*proto*/ static CYTHON_INLINE PetscErrorCode __pyx_f_11libpetsc4py_FunctionEnd(void); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PetscSETERR(PetscErrorCode, char *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PetscCHKERR(PetscErrorCode); /*proto*/ static CYTHON_INLINE void __pyx_f_11libpetsc4py_PythonSETERR(PetscErrorCode); /*proto*/ static CYTHON_INLINE int __pyx_f_11libpetsc4py_CHKERR(PetscErrorCode); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_UNSUPPORTED(char *); /*proto*/ static CYTHON_INLINE PetscInt __pyx_f_11libpetsc4py_getRef(void *); /*proto*/ static CYTHON_INLINE void __pyx_f_11libpetsc4py_addRef(void *); /*proto*/ static CYTHON_INLINE void __pyx_f_11libpetsc4py_delRef(void *); /*proto*/ static CYTHON_INLINE PetscObject __pyx_f_11libpetsc4py_newRef(void *); /*proto*/ static CYTHON_INLINE char *__pyx_f_11libpetsc4py_getPrefix(void *); /*proto*/ static CYTHON_INLINE int __pyx_f_11libpetsc4py_getCommSize(void *); /*proto*/ static CYTHON_INLINE struct PyPetscViewerObject *__pyx_f_11libpetsc4py_Viewer_(PetscViewer); /*proto*/ static CYTHON_INLINE struct PyPetscISObject *__pyx_f_11libpetsc4py_IS_(IS); /*proto*/ static CYTHON_INLINE struct PyPetscVecObject *__pyx_f_11libpetsc4py_Vec_(Vec); /*proto*/ static CYTHON_INLINE struct PyPetscMatObject *__pyx_f_11libpetsc4py_Mat_(Mat); /*proto*/ static CYTHON_INLINE struct PyPetscPCObject *__pyx_f_11libpetsc4py_PC_(PC); /*proto*/ static CYTHON_INLINE struct PyPetscKSPObject *__pyx_f_11libpetsc4py_KSP_(KSP); /*proto*/ static CYTHON_INLINE struct PyPetscSNESObject *__pyx_f_11libpetsc4py_SNES_(SNES); /*proto*/ static CYTHON_INLINE struct PyPetscTSObject *__pyx_f_11libpetsc4py_TS_(TS); /*proto*/ static CYTHON_INLINE PyObject *__pyx_f_11libpetsc4py_bytes2str(const char *); /*proto*/ static PyObject *__pyx_f_11libpetsc4py_parse_url(PyObject *); /*proto*/ static PyObject *__pyx_f_11libpetsc4py_load_module(PyObject *); /*proto*/ static PyObject *__pyx_f_11libpetsc4py_createcontext(char *); /*proto*/ static int __pyx_f_11libpetsc4py_viewcontext(struct __pyx_obj_11libpetsc4py__PyObj *, PetscViewer); /*proto*/ static CYTHON_INLINE struct __pyx_obj_11libpetsc4py__PyMat *__pyx_f_11libpetsc4py_PyMat(Mat); /*proto*/ __PYX_EXTERN_C DL_EXPORT(PetscErrorCode) MatPythonGetContext(Mat, void **); /*proto*/ __PYX_EXTERN_C DL_EXPORT(PetscErrorCode) MatPythonSetContext(Mat, void *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatPythonSetType_PYTHON(Mat, char *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatCreate_Python(Mat); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatDestroy_Python(Mat); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatSetFromOptions_Python(PetscOptionItems *, Mat); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatView_Python(Mat, PetscViewer); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatDuplicate_Python(Mat, MatDuplicateOption, Mat *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatCopy_Python(Mat, Mat, MatStructure); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatGetDiagonalBlock_Python(Mat, Mat *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatGetSubMatrix_Python(Mat, IS, IS, MatReuse, Mat *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatSetOption_Python(Mat, MatOption, PetscBool); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatSetUp_Python(Mat); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatAssemblyBegin_Python(Mat, MatAssemblyType); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatAssemblyEnd_Python(Mat, MatAssemblyType); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatZeroEntries_Python(Mat); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatScale_Python(Mat, PetscScalar); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatShift_Python(Mat, PetscScalar); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatCreateVecs_Python(Mat, Vec *, Vec *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatMult_Python(Mat, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatMultTranspose_Python(Mat, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatMultHermitian_Python(Mat, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatMultAdd_Python(Mat, Vec, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatMultTransposeAdd_Python(Mat, Vec, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatMultHermitianAdd_Python(Mat, Vec, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatMultDiagonalBlock_Python(Mat, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatSolve_Python(Mat, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatSolveTranspose_Python(Mat, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatSolveAdd_Python(Mat, Vec, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatSolveTransposeAdd_Python(Mat, Vec, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatSOR_Python(Mat, Vec, PetscReal, MatSORType, PetscReal, PetscInt, PetscInt, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatGetDiagonal_Python(Mat, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatSetDiagonal_Python(Mat, Vec, InsertMode); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatDiagonalScale_Python(Mat, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatNorm_Python(Mat, NormType, PetscReal *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatRealPart_Python(Mat); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatImagPart_Python(Mat); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_MatConjugate_Python(Mat); /*proto*/ static CYTHON_INLINE struct __pyx_obj_11libpetsc4py__PyPC *__pyx_f_11libpetsc4py_PyPC(PC); /*proto*/ __PYX_EXTERN_C DL_EXPORT(PetscErrorCode) PCPythonGetContext(PC, void **); /*proto*/ __PYX_EXTERN_C DL_EXPORT(PetscErrorCode) PCPythonSetContext(PC, void *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCPythonSetType_PYTHON(PC, char *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCCreate_Python(PC); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCDestroy_Python(PC); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCSetUp_Python(PC); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCReset_Python(PC); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCSetFromOptions_Python(PetscOptionItems *, PC); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCView_Python(PC, PetscViewer); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCPreSolve_Python(PC, KSP, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCPostSolve_Python(PC, KSP, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCApply_Python(PC, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCApplyTranspose_Python(PC, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCApplySymmetricLeft_Python(PC, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PCApplySymmetricRight_Python(PC, Vec, Vec); /*proto*/ static CYTHON_INLINE struct __pyx_obj_11libpetsc4py__PyKSP *__pyx_f_11libpetsc4py_PyKSP(KSP); /*proto*/ __PYX_EXTERN_C DL_EXPORT(PetscErrorCode) KSPPythonGetContext(KSP, void **); /*proto*/ __PYX_EXTERN_C DL_EXPORT(PetscErrorCode) KSPPythonSetContext(KSP, void *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPPythonSetType_PYTHON(KSP, char *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPCreate_Python(KSP); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPDestroy_Python(KSP); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPSetUp_Python(KSP); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPReset_Python(KSP); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPSetFromOptions_Python(PetscOptionItems *, KSP); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPView_Python(KSP, PetscViewer); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPBuildSolution_Python(KSP, Vec, Vec *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPBuildResidual_Python(KSP, Vec, Vec, Vec *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPSolve_Python(KSP); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPSolve_Python_default(KSP, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPPreStep_Python(KSP); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPPostStep_Python(KSP); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_KSPStep_Python(KSP, Vec, Vec); /*proto*/ static CYTHON_INLINE struct __pyx_obj_11libpetsc4py__PySNES *__pyx_f_11libpetsc4py_PySNES(SNES); /*proto*/ __PYX_EXTERN_C DL_EXPORT(PetscErrorCode) SNESPythonGetContext(SNES, void **); /*proto*/ __PYX_EXTERN_C DL_EXPORT(PetscErrorCode) SNESPythonSetContext(SNES, void *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESPythonSetType_PYTHON(SNES, char *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESCreate_Python(SNES); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESDestroy_Python(SNES); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESSetUp_Python(SNES); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESReset_Python(SNES); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESSetFromOptions_Python(PetscOptionItems *, SNES); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESView_Python(SNES, PetscViewer); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESSolve_Python(SNES); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESSolve_Python_default(SNES); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESPreStep_Python(SNES); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESPostStep_Python(SNES); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESStep_Python(SNES, Vec, Vec, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESStep_Python_default(SNES, Vec, Vec, Vec); /*proto*/ static CYTHON_INLINE struct __pyx_obj_11libpetsc4py__PyTS *__pyx_f_11libpetsc4py_PyTS(TS); /*proto*/ __PYX_EXTERN_C DL_EXPORT(PetscErrorCode) TSPythonGetContext(TS, void **); /*proto*/ __PYX_EXTERN_C DL_EXPORT(PetscErrorCode) TSPythonSetContext(TS, void *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSPythonSetType_PYTHON(TS, char *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSCreate_Python(TS); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSDestroy_Python(TS); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSSetUp_Python(TS); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSReset_Python(TS); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSSetFromOptions_Python(PetscOptionItems *, TS); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSView_Python(TS, PetscViewer); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSStep_Python(TS); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSRollBack_Python(TS); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSInterpolate_Python(TS, PetscReal, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSEvaluateStep_Python(TS, PetscInt, Vec, PetscBool *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESTSFormFunction_Python(SNES, Vec, Vec, TS); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_SNESTSFormJacobian_Python(SNES, Vec, Mat, Mat, TS); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSSolveStep_Python(TS, PetscReal, Vec); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSAdaptStep_Python(TS, PetscReal, Vec, PetscReal *, PetscBool *); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_TSStep_Python_default(TS); /*proto*/ static PetscErrorCode __pyx_f_11libpetsc4py_PetscPythonMonitorSet_Python(PetscObject, const char *); /*proto*/ __PYX_EXTERN_C DL_EXPORT(PetscErrorCode) PetscPythonRegisterAll(void); /*proto*/ #define __Pyx_MODULE_NAME "libpetsc4py" int __pyx_module_is_main_libpetsc4py = 0; /* Implementation of 'libpetsc4py' */ static PyObject *__pyx_builtin_open; static PyObject *__pyx_builtin_compile; static const char __pyx_k_[] = ":"; static const char __pyx_k__3[] = "."; static const char __pyx_k__5[] = ","; static const char __pyx_k_rU[] = "rU"; static const char __pyx_k_SOR[] = "SOR"; static const char __pyx_k_copy[] = "copy"; static const char __pyx_k_dict[] = "__dict__"; static const char __pyx_k_exec[] = "exec"; static const char __pyx_k_file[] = "__file__"; static const char __pyx_k_main[] = "__main__"; static const char __pyx_k_mult[] = "mult"; static const char __pyx_k_name[] = "__name__"; static const char __pyx_k_norm[] = "norm"; static const char __pyx_k_open[] = "open"; static const char __pyx_k_read[] = "read"; static const char __pyx_k_step[] = "step"; static const char __pyx_k_view[] = "view"; static const char __pyx_k_Error[] = "Error"; static const char __pyx_k_apply[] = "apply"; static const char __pyx_k_class[] = "__class__"; static const char __pyx_k_close[] = "close"; static const char __pyx_k_reset[] = "reset"; static const char __pyx_k_scale[] = "scale"; static const char __pyx_k_setUp[] = "setUp"; static const char __pyx_k_shift[] = "shift"; static const char __pyx_k_solve[] = "solve"; static const char __pyx_k_split[] = "split"; static const char __pyx_k_create[] = "create"; static const char __pyx_k_encode[] = "encode"; static const char __pyx_k_import[] = "__import__"; static const char __pyx_k_module[] = "__module__"; static const char __pyx_k_rsplit[] = "rsplit"; static const char __pyx_k_compile[] = "compile"; static const char __pyx_k_destroy[] = "destroy"; static const char __pyx_k_monitor[] = "monitor"; static const char __pyx_k_multAdd[] = "multAdd"; static const char __pyx_k_package[] = "__package__"; static const char __pyx_k_preStep[] = "preStep"; static const char __pyx_k_assembly[] = "assembly"; static const char __pyx_k_builtins[] = "__builtins__"; static const char __pyx_k_imagPart[] = "imagPart"; static const char __pyx_k_postStep[] = "postStep"; static const char __pyx_k_preSolve[] = "preSolve"; static const char __pyx_k_realPart[] = "realPart"; static const char __pyx_k_rollback[] = "rollback"; static const char __pyx_k_solveAdd[] = "solveAdd"; static const char __pyx_k_adaptStep[] = "adaptStep"; static const char __pyx_k_conjugate[] = "conjugate"; static const char __pyx_k_duplicate[] = "duplicate"; static const char __pyx_k_postSolve[] = "postSolve"; static const char __pyx_k_setOption[] = "setOption"; static const char __pyx_k_solveStep[] = "solveStep"; static const char __pyx_k_createVecs[] = "createVecs"; static const char __pyx_k_pyx_vtable[] = "__pyx_vtable__"; static const char __pyx_k_setMonitor[] = "setMonitor"; static const char __pyx_k_assemblyEnd[] = "assemblyEnd"; static const char __pyx_k_getDiagonal[] = "getDiagonal"; static const char __pyx_k_interpolate[] = "interpolate"; static const char __pyx_k_setDiagonal[] = "setDiagonal"; static const char __pyx_k_zeroEntries[] = "zeroEntries"; static const char __pyx_k_evaluatestep[] = "evaluatestep"; static const char __pyx_k_getSubMatrix[] = "getSubMatrix"; static const char __pyx_k_assemblyBegin[] = "assemblyBegin"; static const char __pyx_k_buildResidual[] = "buildResidual"; static const char __pyx_k_buildSolution[] = "buildSolution"; static const char __pyx_k_diagonalScale[] = "diagonalScale"; static const char __pyx_k_multHermitian[] = "multHermitian"; static const char __pyx_k_multTranspose[] = "multTranspose"; static const char __pyx_k_stepTranspose[] = "stepTranspose"; static const char __pyx_k_applyTranspose[] = "applyTranspose"; static const char __pyx_k_petsc4py_PETSc[] = "petsc4py.PETSc"; static const char __pyx_k_setFromOptions[] = "setFromOptions"; static const char __pyx_k_solveTranspose[] = "solveTranspose"; static const char __pyx_k_formSNESFunction[] = "formSNESFunction"; static const char __pyx_k_formSNESJacobian[] = "formSNESJacobian"; static const char __pyx_k_getDiagonalBlock[] = "getDiagonalBlock"; static const char __pyx_k_multHermitianAdd[] = "multHermitianAdd"; static const char __pyx_k_multTransposeAdd[] = "multTransposeAdd"; static const char __pyx_k_multDiagonalBlock[] = "multDiagonalBlock"; static const char __pyx_k_solveTransposeAdd[] = "solveTransposeAdd"; static const char __pyx_k_applySymmetricLeft[] = "applySymmetricLeft"; static const char __pyx_k_applySymmetricRight[] = "applySymmetricRight"; static PyObject *__pyx_kp_s_; static PyObject *__pyx_n_s_Error; static PyObject *__pyx_n_s_SOR; static PyObject *__pyx_kp_s__3; static PyObject *__pyx_kp_s__5; static PyObject *__pyx_n_s_adaptStep; static PyObject *__pyx_n_s_apply; static PyObject *__pyx_n_s_applySymmetricLeft; static PyObject *__pyx_n_s_applySymmetricRight; static PyObject *__pyx_n_s_applyTranspose; static PyObject *__pyx_n_s_assembly; static PyObject *__pyx_n_s_assemblyBegin; static PyObject *__pyx_n_s_assemblyEnd; static PyObject *__pyx_n_s_buildResidual; static PyObject *__pyx_n_s_buildSolution; static PyObject *__pyx_n_s_builtins; static PyObject *__pyx_n_s_class; static PyObject *__pyx_n_s_close; static PyObject *__pyx_n_s_compile; static PyObject *__pyx_n_s_conjugate; static PyObject *__pyx_n_s_copy; static PyObject *__pyx_n_s_create; static PyObject *__pyx_n_s_createVecs; static PyObject *__pyx_n_s_destroy; static PyObject *__pyx_n_s_diagonalScale; static PyObject *__pyx_n_s_dict; static PyObject *__pyx_n_s_duplicate; static PyObject *__pyx_n_s_encode; static PyObject *__pyx_n_s_evaluatestep; static PyObject *__pyx_n_s_exec; static PyObject *__pyx_n_s_file; static PyObject *__pyx_n_s_formSNESFunction; static PyObject *__pyx_n_s_formSNESJacobian; static PyObject *__pyx_n_s_getDiagonal; static PyObject *__pyx_n_s_getDiagonalBlock; static PyObject *__pyx_n_s_getSubMatrix; static PyObject *__pyx_n_s_imagPart; static PyObject *__pyx_n_s_import; static PyObject *__pyx_n_s_interpolate; static PyObject *__pyx_n_s_main; static PyObject *__pyx_n_s_module; static PyObject *__pyx_n_s_monitor; static PyObject *__pyx_n_s_mult; static PyObject *__pyx_n_s_multAdd; static PyObject *__pyx_n_s_multDiagonalBlock; static PyObject *__pyx_n_s_multHermitian; static PyObject *__pyx_n_s_multHermitianAdd; static PyObject *__pyx_n_s_multTranspose; static PyObject *__pyx_n_s_multTransposeAdd; static PyObject *__pyx_n_s_name; static PyObject *__pyx_n_s_norm; static PyObject *__pyx_n_s_open; static PyObject *__pyx_n_s_package; static PyObject *__pyx_n_s_petsc4py_PETSc; static PyObject *__pyx_n_s_postSolve; static PyObject *__pyx_n_s_postStep; static PyObject *__pyx_n_s_preSolve; static PyObject *__pyx_n_s_preStep; static PyObject *__pyx_n_s_pyx_vtable; static PyObject *__pyx_n_s_rU; static PyObject *__pyx_n_s_read; static PyObject *__pyx_n_s_realPart; static PyObject *__pyx_n_s_reset; static PyObject *__pyx_n_s_rollback; static PyObject *__pyx_n_s_rsplit; static PyObject *__pyx_n_s_scale; static PyObject *__pyx_n_s_setDiagonal; static PyObject *__pyx_n_s_setFromOptions; static PyObject *__pyx_n_s_setMonitor; static PyObject *__pyx_n_s_setOption; static PyObject *__pyx_n_s_setUp; static PyObject *__pyx_n_s_shift; static PyObject *__pyx_n_s_solve; static PyObject *__pyx_n_s_solveAdd; static PyObject *__pyx_n_s_solveStep; static PyObject *__pyx_n_s_solveTranspose; static PyObject *__pyx_n_s_solveTransposeAdd; static PyObject *__pyx_n_s_split; static PyObject *__pyx_n_s_step; static PyObject *__pyx_n_s_stepTranspose; static PyObject *__pyx_n_s_view; static PyObject *__pyx_n_s_zeroEntries; static PyObject *__pyx_pf_11libpetsc4py_6_PyObj___getattr__(struct __pyx_obj_11libpetsc4py__PyObj *__pyx_v_self, PyObject *__pyx_v_attr); /* proto */ static PyObject *__pyx_tp_new_11libpetsc4py__PyObj(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_11libpetsc4py__PyMat(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_11libpetsc4py__PyPC(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_11libpetsc4py__PyKSP(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_11libpetsc4py__PySNES(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_11libpetsc4py__PyTS(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_int_1; static PyObject *__pyx_tuple__2; static PyObject *__pyx_tuple__4; static PyObject *__pyx_tuple__6; /* "libpetsc4py.pyx":28 * void initlibpetsc4py() nogil except * * * cdef public int import_libpetsc4py() nogil except -1: # <<<<<<<<<<<<<< * initlibpetsc4py() * return 0 */ int import_libpetsc4py(void) { int __pyx_r; /* "libpetsc4py.pyx":29 * * cdef public int import_libpetsc4py() nogil except -1: * initlibpetsc4py() # <<<<<<<<<<<<<< * return 0 * */ initlibpetsc4py(); if (unlikely(__Pyx_ErrOccurredWithGIL())) __PYX_ERR(0, 29, __pyx_L1_error) /* "libpetsc4py.pyx":30 * cdef public int import_libpetsc4py() nogil except -1: * initlibpetsc4py() * return 0 # <<<<<<<<<<<<<< * * # -------------------------------------------------------------------- */ __pyx_r = 0; goto __pyx_L0; /* "libpetsc4py.pyx":28 * void initlibpetsc4py() nogil except * * * cdef public int import_libpetsc4py() nogil except -1: # <<<<<<<<<<<<<< * initlibpetsc4py() * return 0 */ /* function exit code */ __pyx_L1_error:; { #ifdef WITH_THREAD PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure(); #endif __Pyx_AddTraceback("libpetsc4py.import_libpetsc4py", __pyx_clineno, __pyx_lineno, __pyx_filename); #ifdef WITH_THREAD PyGILState_Release(__pyx_gilstate_save); #endif } __pyx_r = -1; __pyx_L0:; return __pyx_r; } /* "libpetsc4py.pyx":83 * PetscErrorCode PetscViewerStringSPrintf(PetscViewer,char[],...) * * cdef inline object toInt(PetscInt value): return value # <<<<<<<<<<<<<< * cdef inline PetscInt asInt(object value) except?-1: return value * cdef inline object toReal(PetscReal value): return value */ static CYTHON_INLINE PyObject *__pyx_f_11libpetsc4py_toInt(PetscInt __pyx_v_value) { PyObject *__pyx_r = NULL; 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__Pyx_RefNannySetupContext("asInt", 0); __pyx_t_1 = __Pyx_PyInt_As_PetscInt(__pyx_v_value); if (unlikely((__pyx_t_1 == (PetscInt)-1) && PyErr_Occurred())) __PYX_ERR(0, 84, __pyx_L1_error) __pyx_r = __pyx_t_1; goto __pyx_L0; /* function exit code */ __pyx_L1_error:; __Pyx_AddTraceback("libpetsc4py.asInt", __pyx_clineno, __pyx_lineno, __pyx_filename); __pyx_r = -1L; __pyx_L0:; __Pyx_RefNannyFinishContext(); return __pyx_r; } /* "libpetsc4py.pyx":85 * cdef inline object toInt(PetscInt value): return value * cdef inline PetscInt asInt(object value) except?-1: return value * cdef inline object toReal(PetscReal value): return value # <<<<<<<<<<<<<< * cdef inline PetscReal asReal(object value) except?-1: return value * cdef extern from "scalar.h": */ static CYTHON_INLINE PyObject *__pyx_f_11libpetsc4py_toReal(PetscReal __pyx_v_value) { PyObject *__pyx_r = NULL; __Pyx_RefNannyDeclarations PyObject *__pyx_t_1 = NULL; __Pyx_RefNannySetupContext("toReal", 0); __Pyx_XDECREF(__pyx_r); __pyx_t_1 = PyFloat_FromDouble(__pyx_v_value); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 85, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); __pyx_r = __pyx_t_1; __pyx_t_1 = 0; goto __pyx_L0; /* function exit code */ __pyx_L1_error:; __Pyx_XDECREF(__pyx_t_1); __Pyx_AddTraceback("libpetsc4py.toReal", __pyx_clineno, __pyx_lineno, __pyx_filename); __pyx_r = 0; __pyx_L0:; __Pyx_XGIVEREF(__pyx_r); __Pyx_RefNannyFinishContext(); return __pyx_r; } /* "libpetsc4py.pyx":86 * cdef inline PetscInt asInt(object value) except?-1: return value * cdef inline object toReal(PetscReal value): return value * cdef inline PetscReal asReal(object value) except?-1: return value # <<<<<<<<<<<<<< * cdef extern from "scalar.h": * object toScalar"PyPetscScalar_FromPetscScalar"(PetscScalar) */ static CYTHON_INLINE PetscReal __pyx_f_11libpetsc4py_asReal(PyObject *__pyx_v_value) { PetscReal __pyx_r; __Pyx_RefNannyDeclarations PetscReal __pyx_t_1; __Pyx_RefNannySetupContext("asReal", 0); __pyx_t_1 = __pyx_PyFloat_AsDouble(__pyx_v_value); if (unlikely((__pyx_t_1 == (PetscReal)-1) && PyErr_Occurred())) __PYX_ERR(0, 86, __pyx_L1_error) __pyx_r = __pyx_t_1; goto __pyx_L0; /* function exit code */ __pyx_L1_error:; __Pyx_AddTraceback("libpetsc4py.asReal", __pyx_clineno, __pyx_lineno, __pyx_filename); __pyx_r = -1.0; __pyx_L0:; __Pyx_RefNannyFinishContext(); return __pyx_r; } /* "libpetsc4py.pyx":103 * cdef int istack = 0 * * cdef inline void FunctionBegin(char name[]) nogil: # <<<<<<<<<<<<<< * global FUNCT * FUNCT = name */ static CYTHON_INLINE void __pyx_f_11libpetsc4py_FunctionBegin(char *__pyx_v_name) { int __pyx_t_1; /* "libpetsc4py.pyx":105 * cdef inline void FunctionBegin(char name[]) nogil: * global FUNCT * FUNCT = name # <<<<<<<<<<<<<< * global fstack, istack * fstack[istack] = FUNCT */ __pyx_v_11libpetsc4py_FUNCT = __pyx_v_name; /* "libpetsc4py.pyx":107 * FUNCT = name * global fstack, istack * fstack[istack] = FUNCT # <<<<<<<<<<<<<< * istack += 1 * if istack >= 1024: */ (__pyx_v_11libpetsc4py_fstack[__pyx_v_11libpetsc4py_istack]) = __pyx_v_11libpetsc4py_FUNCT; /* "libpetsc4py.pyx":108 * global fstack, istack * fstack[istack] = FUNCT * istack += 1 # <<<<<<<<<<<<<< * if istack >= 1024: * istack = 0 */ __pyx_v_11libpetsc4py_istack = (__pyx_v_11libpetsc4py_istack + 1); /* "libpetsc4py.pyx":109 * fstack[istack] = FUNCT * istack += 1 * if istack >= 1024: # <<<<<<<<<<<<<< * istack = 0 * return */ __pyx_t_1 = ((__pyx_v_11libpetsc4py_istack >= 0x400) != 0); if (__pyx_t_1) { /* "libpetsc4py.pyx":110 * istack += 1 * if istack >= 1024: * istack = 0 # <<<<<<<<<<<<<< * return * */ __pyx_v_11libpetsc4py_istack = 0; /* "libpetsc4py.pyx":109 * fstack[istack] = FUNCT * istack += 1 * if istack >= 1024: # <<<<<<<<<<<<<< * istack = 0 * return */ } /* "libpetsc4py.pyx":111 * if istack >= 1024: * istack = 0 * return # <<<<<<<<<<<<<< * * cdef inline PetscErrorCode FunctionEnd() nogil: */ goto __pyx_L0; /* "libpetsc4py.pyx":103 * cdef int istack = 0 * * cdef inline void FunctionBegin(char name[]) nogil: # <<<<<<<<<<<<<< * global FUNCT * FUNCT = name */ /* function exit code */ __pyx_L0:; } /* "libpetsc4py.pyx":113 * return * * cdef inline PetscErrorCode FunctionEnd() nogil: # <<<<<<<<<<<<<< * global FUNCT * FUNCT = NULL */ static CYTHON_INLINE PetscErrorCode __pyx_f_11libpetsc4py_FunctionEnd(void) { PetscErrorCode __pyx_r; int __pyx_t_1; /* "libpetsc4py.pyx":115 * cdef inline PetscErrorCode FunctionEnd() nogil: * global FUNCT * FUNCT = NULL # <<<<<<<<<<<<<< * global fstack, istack * istack -= 1 */ __pyx_v_11libpetsc4py_FUNCT = NULL; /* "libpetsc4py.pyx":117 * FUNCT = NULL * global fstack, istack * istack -= 1 # <<<<<<<<<<<<<< * if istack < 0: * istack = 1024 */ __pyx_v_11libpetsc4py_istack = (__pyx_v_11libpetsc4py_istack - 1); /* "libpetsc4py.pyx":118 * global fstack, istack * istack -= 1 * if istack < 0: # <<<<<<<<<<<<<< * istack = 1024 * FUNCT = fstack[istack] */ __pyx_t_1 = ((__pyx_v_11libpetsc4py_istack < 0) != 0); if (__pyx_t_1) { /* "libpetsc4py.pyx":119 * istack -= 1 * if istack < 0: * istack = 1024 # <<<<<<<<<<<<<< * FUNCT = fstack[istack] * return 0 */ __pyx_v_11libpetsc4py_istack = 0x400; /* "libpetsc4py.pyx":118 * global fstack, istack * istack -= 1 * if istack < 0: # <<<<<<<<<<<<<< * istack = 1024 * FUNCT = fstack[istack] */ } /* "libpetsc4py.pyx":120 * if istack < 0: * istack = 1024 * FUNCT = fstack[istack] # <<<<<<<<<<<<<< * return 0 * */ __pyx_v_11libpetsc4py_FUNCT = (__pyx_v_11libpetsc4py_fstack[__pyx_v_11libpetsc4py_istack]); /* "libpetsc4py.pyx":121 * istack = 1024 * FUNCT = fstack[istack] * return 0 # <<<<<<<<<<<<<< * * cdef PetscErrorCode PetscSETERR(PetscErrorCode ierr,char msg[]) nogil: */ __pyx_r = 0; goto __pyx_L0; /* "libpetsc4py.pyx":113 * return * * cdef inline PetscErrorCode FunctionEnd() nogil: # <<<<<<<<<<<<<< * global FUNCT * FUNCT = NULL */ /* function exit code */ __pyx_L0:; return __pyx_r; } /* "libpetsc4py.pyx":123 * return 0 * * cdef PetscErrorCode PetscSETERR(PetscErrorCode ierr,char msg[]) nogil: # <<<<<<<<<<<<<< * global fstack, istack * istack = 0; fstack[istack] = NULL; */ static PetscErrorCode __pyx_f_11libpetsc4py_PetscSETERR(PetscErrorCode __pyx_v_ierr, char *__pyx_v_msg) { PetscErrorCode __pyx_r; /* "libpetsc4py.pyx":125 * cdef PetscErrorCode PetscSETERR(PetscErrorCode ierr,char msg[]) nogil: * global fstack, istack * istack = 0; fstack[istack] = NULL; # <<<<<<<<<<<<<< * global FUNCT * return PetscERROR(PETSC_COMM_SELF,FUNCT,ierr, */ __pyx_v_11libpetsc4py_istack = 0; (__pyx_v_11libpetsc4py_fstack[__pyx_v_11libpetsc4py_istack]) = NULL; /* "libpetsc4py.pyx":127 * istack = 0; fstack[istack] = NULL; * global FUNCT * return PetscERROR(PETSC_COMM_SELF,FUNCT,ierr, # <<<<<<<<<<<<<< * PETSC_ERROR_INITIAL, msg, NULL) * */ __pyx_r = PetscERROR(PETSC_COMM_SELF, __pyx_v_11libpetsc4py_FUNCT, __pyx_v_ierr, PETSC_ERROR_INITIAL, __pyx_v_msg, NULL); goto __pyx_L0; /* "libpetsc4py.pyx":123 * return 0 * * cdef PetscErrorCode PetscSETERR(PetscErrorCode ierr,char msg[]) nogil: # <<<<<<<<<<<<<< * global fstack, istack * istack = 0; fstack[istack] = NULL; */ /* function exit code */ __pyx_L0:; return __pyx_r; } /* "libpetsc4py.pyx":130 * PETSC_ERROR_INITIAL, msg, NULL) * * cdef PetscErrorCode PetscCHKERR(PetscErrorCode ierr) nogil: # <<<<<<<<<<<<<< * global fstack, istack * istack = 0; fstack[istack] = NULL; */ static PetscErrorCode __pyx_f_11libpetsc4py_PetscCHKERR(PetscErrorCode __pyx_v_ierr) { PetscErrorCode __pyx_r; /* "libpetsc4py.pyx":132 * cdef PetscErrorCode PetscCHKERR(PetscErrorCode ierr) nogil: * global fstack, istack * istack = 0; fstack[istack] = NULL; # <<<<<<<<<<<<<< * global FUNCT * return PetscERROR(PETSC_COMM_SELF,FUNCT,ierr, */ __pyx_v_11libpetsc4py_istack = 0; (__pyx_v_11libpetsc4py_fstack[__pyx_v_11libpetsc4py_istack]) = NULL; /* "libpetsc4py.pyx":134 * istack = 0; fstack[istack] = NULL; * global FUNCT * return PetscERROR(PETSC_COMM_SELF,FUNCT,ierr, # <<<<<<<<<<<<<< * PETSC_ERROR_REPEAT, b"", NULL) * */ __pyx_r = PetscERROR(PETSC_COMM_SELF, __pyx_v_11libpetsc4py_FUNCT, __pyx_v_ierr, PETSC_ERROR_REPEAT, ((char *)""), NULL); goto __pyx_L0; /* "libpetsc4py.pyx":130 * PETSC_ERROR_INITIAL, msg, NULL) * * cdef PetscErrorCode PetscCHKERR(PetscErrorCode ierr) nogil: # <<<<<<<<<<<<<< * global fstack, istack * istack = 0; fstack[istack] = NULL; */ /* function exit code */ __pyx_L0:; return __pyx_r; } /* "libpetsc4py.pyx":145 * from petsc4py.PETSc import Error as PetscError * * cdef inline void PythonSETERR(PetscErrorCode ierr) with gil: # <<<<<<<<<<<<<< * if (PetscError) != NULL: * PyErr_SetObject(PetscError, ierr) */ static CYTHON_INLINE void __pyx_f_11libpetsc4py_PythonSETERR(PetscErrorCode __pyx_v_ierr) { __Pyx_RefNannyDeclarations int __pyx_t_1; PyObject *__pyx_t_2 = NULL; PyObject *__pyx_t_3 = NULL; #ifdef WITH_THREAD PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure(); #endif __Pyx_RefNannySetupContext("PythonSETERR", 0); /* "libpetsc4py.pyx":146 * * cdef inline void PythonSETERR(PetscErrorCode ierr) with gil: * if (PetscError) != NULL: # <<<<<<<<<<<<<< * PyErr_SetObject(PetscError, ierr) * else: */ __pyx_t_1 = ((((void *)__pyx_v_11libpetsc4py_PetscError) != NULL) != 0); if (__pyx_t_1) { /* "libpetsc4py.pyx":147 * cdef inline void PythonSETERR(PetscErrorCode ierr) with gil: * if (PetscError) != NULL: * PyErr_SetObject(PetscError, ierr) # <<<<<<<<<<<<<< * else: * PyErr_SetObject(PyExc_RuntimeError, ierr) */ __pyx_t_2 = __pyx_v_11libpetsc4py_PetscError; __Pyx_INCREF(__pyx_t_2); __pyx_t_3 = __Pyx_PyInt_From_long(((long)__pyx_v_ierr)); if (unlikely(!__pyx_t_3)) __PYX_ERR(0, 147, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); PyErr_SetObject(__pyx_t_2, __pyx_t_3); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; /* "libpetsc4py.pyx":146 * * cdef inline void PythonSETERR(PetscErrorCode ierr) with gil: * if (PetscError) != NULL: # <<<<<<<<<<<<<< * PyErr_SetObject(PetscError, ierr) * else: */ goto __pyx_L3; } /* "libpetsc4py.pyx":149 * PyErr_SetObject(PetscError, ierr) * else: * PyErr_SetObject(PyExc_RuntimeError, ierr) # <<<<<<<<<<<<<< * * cdef inline int CHKERR(PetscErrorCode ierr) nogil except -1: */ /*else*/ { __pyx_t_3 = ((PyObject *)PyExc_RuntimeError); __Pyx_INCREF(__pyx_t_3); __pyx_t_2 = __Pyx_PyInt_From_long(((long)__pyx_v_ierr)); if (unlikely(!__pyx_t_2)) __PYX_ERR(0, 149, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_2); PyErr_SetObject(__pyx_t_3, __pyx_t_2); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; } __pyx_L3:; /* "libpetsc4py.pyx":145 * from petsc4py.PETSc import Error as PetscError * * cdef inline void PythonSETERR(PetscErrorCode ierr) with gil: # <<<<<<<<<<<<<< * if (PetscError) != NULL: * PyErr_SetObject(PetscError, ierr) */ /* function exit code */ goto __pyx_L0; __pyx_L1_error:; __Pyx_XDECREF(__pyx_t_2); __Pyx_XDECREF(__pyx_t_3); __Pyx_WriteUnraisable("libpetsc4py.PythonSETERR", __pyx_clineno, __pyx_lineno, __pyx_filename, 0, 0); __pyx_L0:; __Pyx_RefNannyFinishContext(); #ifdef WITH_THREAD PyGILState_Release(__pyx_gilstate_save); #endif } /* "libpetsc4py.pyx":151 * PyErr_SetObject(PyExc_RuntimeError, ierr) * * cdef inline int CHKERR(PetscErrorCode ierr) nogil except -1: # <<<<<<<<<<<<<< * if ierr == 0: * return 0 */ static CYTHON_INLINE int __pyx_f_11libpetsc4py_CHKERR(PetscErrorCode __pyx_v_ierr) { int __pyx_r; int __pyx_t_1; /* "libpetsc4py.pyx":152 * * cdef inline int CHKERR(PetscErrorCode ierr) nogil except -1: * if ierr == 0: # <<<<<<<<<<<<<< * return 0 * if ierr == PETSC_ERR_PYTHON: */ __pyx_t_1 = ((__pyx_v_ierr == 0) != 0); if (__pyx_t_1) { /* "libpetsc4py.pyx":153 * cdef inline int CHKERR(PetscErrorCode ierr) nogil except -1: * if ierr == 0: * return 0 # <<<<<<<<<<<<<< * if ierr == PETSC_ERR_PYTHON: * #PetscCHKERR(ierr) */ __pyx_r = 0; goto __pyx_L0; /* "libpetsc4py.pyx":152 * * cdef inline int CHKERR(PetscErrorCode ierr) nogil except -1: * if ierr == 0: # <<<<<<<<<<<<<< * return 0 * if ierr == PETSC_ERR_PYTHON: */ } /* "libpetsc4py.pyx":154 * if ierr == 0: * return 0 * if ierr == PETSC_ERR_PYTHON: # <<<<<<<<<<<<<< * #PetscCHKERR(ierr) * return -1 */ __pyx_t_1 = ((__pyx_v_ierr == PETSC_ERR_PYTHON) != 0); if (__pyx_t_1) { /* "libpetsc4py.pyx":156 * if ierr == PETSC_ERR_PYTHON: * #PetscCHKERR(ierr) * return -1 # <<<<<<<<<<<<<< * if Py_IsInitialized(): * PythonSETERR(ierr) */ __pyx_r = -1; goto __pyx_L0; /* "libpetsc4py.pyx":154 * if ierr == 0: * return 0 * if ierr == PETSC_ERR_PYTHON: # <<<<<<<<<<<<<< * #PetscCHKERR(ierr) * return -1 */ } /* "libpetsc4py.pyx":157 * #PetscCHKERR(ierr) * return -1 * if Py_IsInitialized(): # <<<<<<<<<<<<<< * PythonSETERR(ierr) * PetscCHKERR(ierr) */ __pyx_t_1 = (Py_IsInitialized() != 0); if (__pyx_t_1) { /* "libpetsc4py.pyx":158 * return -1 * if Py_IsInitialized(): * PythonSETERR(ierr) # <<<<<<<<<<<<<< * PetscCHKERR(ierr) * return -1 */ __pyx_f_11libpetsc4py_PythonSETERR(__pyx_v_ierr); /* "libpetsc4py.pyx":157 * #PetscCHKERR(ierr) * return -1 * if Py_IsInitialized(): # <<<<<<<<<<<<<< * PythonSETERR(ierr) * PetscCHKERR(ierr) */ } /* "libpetsc4py.pyx":159 * if Py_IsInitialized(): * PythonSETERR(ierr) * PetscCHKERR(ierr) # <<<<<<<<<<<<<< * return -1 * */ __pyx_f_11libpetsc4py_PetscCHKERR(__pyx_v_ierr); /* "libpetsc4py.pyx":160 * PythonSETERR(ierr) * PetscCHKERR(ierr) * return -1 # <<<<<<<<<<<<<< * * cdef PetscErrorCode UNSUPPORTED(char msg[]) nogil: */ __pyx_r = -1; goto __pyx_L0; /* "libpetsc4py.pyx":151 * PyErr_SetObject(PyExc_RuntimeError, ierr) * * cdef inline int CHKERR(PetscErrorCode ierr) nogil except -1: # <<<<<<<<<<<<<< * if ierr == 0: * return 0 */ /* function exit code */ __pyx_L0:; return __pyx_r; } /* "libpetsc4py.pyx":162 * return -1 * * cdef PetscErrorCode UNSUPPORTED(char msg[]) nogil: # <<<<<<<<<<<<<< * global FUNCT * return PetscERROR(PETSC_COMM_SELF,FUNCT,PETSC_ERR_USER, */ static PetscErrorCode __pyx_f_11libpetsc4py_UNSUPPORTED(char *__pyx_v_msg) { PetscErrorCode __pyx_r; /* "libpetsc4py.pyx":164 * cdef PetscErrorCode UNSUPPORTED(char msg[]) nogil: * global FUNCT * return PetscERROR(PETSC_COMM_SELF,FUNCT,PETSC_ERR_USER, # <<<<<<<<<<<<<< * PETSC_ERROR_INITIAL,b"method %s()",msg) * */ __pyx_r = PetscERROR(PETSC_COMM_SELF, __pyx_v_11libpetsc4py_FUNCT, PETSC_ERR_USER, PETSC_ERROR_INITIAL, ((char *)"method %s()"), __pyx_v_msg); goto __pyx_L0; /* "libpetsc4py.pyx":162 * return -1 * * cdef PetscErrorCode UNSUPPORTED(char msg[]) nogil: # <<<<<<<<<<<<<< * global FUNCT * return PetscERROR(PETSC_COMM_SELF,FUNCT,PETSC_ERR_USER, */ /* function exit code */ __pyx_L0:; return __pyx_r; } /* "libpetsc4py.pyx":169 * # -------------------------------------------------------------------- * * cdef inline PetscInt getRef(void *pobj) nogil: # <<<<<<<<<<<<<< * cdef PetscObject obj = pobj * if obj == NULL: return 0 */ static CYTHON_INLINE PetscInt __pyx_f_11libpetsc4py_getRef(void *__pyx_v_pobj) { PetscObject __pyx_v_obj; PetscInt __pyx_r; int __pyx_t_1; /* "libpetsc4py.pyx":170 * * cdef inline PetscInt getRef(void *pobj) nogil: * cdef PetscObject obj = pobj # <<<<<<<<<<<<<< * if obj == NULL: return 0 * else: return obj.refct */ __pyx_v_obj = ((PetscObject)__pyx_v_pobj); /* "libpetsc4py.pyx":171 * cdef inline PetscInt getRef(void *pobj) nogil: * cdef PetscObject obj = pobj * if obj == NULL: return 0 # <<<<<<<<<<<<<< * else: return obj.refct * */ __pyx_t_1 = ((__pyx_v_obj == NULL) != 0); if (__pyx_t_1) { __pyx_r = 0; goto __pyx_L0; } /* "libpetsc4py.pyx":172 * cdef PetscObject obj = pobj * if obj == NULL: return 0 * else: return obj.refct # <<<<<<<<<<<<<< * * cdef inline void addRef(void *pobj) nogil: */ /*else*/ { __pyx_r = __pyx_v_obj->refct; goto __pyx_L0; } /* "libpetsc4py.pyx":169 * # -------------------------------------------------------------------- * * cdef inline PetscInt getRef(void *pobj) nogil: # <<<<<<<<<<<<<< * cdef PetscObject obj = pobj * if obj == NULL: return 0 */ /* function exit code */ __pyx_L0:; return __pyx_r; } /* "libpetsc4py.pyx":174 * else: return obj.refct * * cdef inline void addRef(void *pobj) nogil: # <<<<<<<<<<<<<< * cdef PetscObject obj = pobj * if obj != NULL: obj.refct += 1 */ static CYTHON_INLINE void __pyx_f_11libpetsc4py_addRef(void *__pyx_v_pobj) { PetscObject __pyx_v_obj; int __pyx_t_1; /* "libpetsc4py.pyx":175 * * cdef inline void addRef(void *pobj) nogil: * cdef PetscObject obj = pobj # <<<<<<<<<<<<<< * if obj != NULL: obj.refct += 1 * */ __pyx_v_obj = ((PetscObject)__pyx_v_pobj); /* "libpetsc4py.pyx":176 * cdef inline void addRef(void *pobj) nogil: * cdef PetscObject obj = pobj * if obj != NULL: obj.refct += 1 # <<<<<<<<<<<<<< * * cdef inline void delRef(void *pobj) nogil: */ __pyx_t_1 = ((__pyx_v_obj != NULL) != 0); if (__pyx_t_1) { __pyx_v_obj->refct = (__pyx_v_obj->refct + 1); } /* "libpetsc4py.pyx":174 * else: return obj.refct * * cdef inline void addRef(void *pobj) nogil: # <<<<<<<<<<<<<< * cdef PetscObject obj = pobj * if obj != NULL: obj.refct += 1 */ /* function exit code */ } /* "libpetsc4py.pyx":178 * if obj != NULL: obj.refct += 1 * * cdef inline void delRef(void *pobj) nogil: # <<<<<<<<<<<<<< * cdef PetscObject obj = pobj * if obj != NULL: obj.refct -= 1 */ static CYTHON_INLINE void __pyx_f_11libpetsc4py_delRef(void *__pyx_v_pobj) { PetscObject __pyx_v_obj; int __pyx_t_1; /* "libpetsc4py.pyx":179 * * cdef inline void delRef(void *pobj) nogil: * cdef PetscObject obj = pobj # <<<<<<<<<<<<<< * if obj != NULL: obj.refct -= 1 * */ __pyx_v_obj = ((PetscObject)__pyx_v_pobj); /* "libpetsc4py.pyx":180 * cdef inline void delRef(void *pobj) nogil: * cdef PetscObject obj = pobj * if obj != NULL: obj.refct -= 1 # <<<<<<<<<<<<<< * * cdef inline PetscObject newRef(void *pobj) nogil: */ __pyx_t_1 = ((__pyx_v_obj != NULL) != 0); if (__pyx_t_1) { __pyx_v_obj->refct = (__pyx_v_obj->refct - 1); } /* "libpetsc4py.pyx":178 * if obj != NULL: obj.refct += 1 * * cdef inline void delRef(void *pobj) nogil: # <<<<<<<<<<<<<< * cdef PetscObject obj = pobj * if obj != NULL: obj.refct -= 1 */ /* function exit code */ } /* "libpetsc4py.pyx":182 * if obj != NULL: obj.refct -= 1 * * cdef inline PetscObject newRef(void *pobj) nogil: # <<<<<<<<<<<<<< * cdef PetscObject obj = pobj * cdef int ierr = 0 */ static CYTHON_INLINE PetscObject __pyx_f_11libpetsc4py_newRef(void *__pyx_v_pobj) { PetscObject __pyx_v_obj; int __pyx_v_ierr; PetscObject __pyx_r; int __pyx_t_1; /* "libpetsc4py.pyx":183 * * cdef inline PetscObject newRef(void *pobj) nogil: * cdef PetscObject obj = pobj # <<<<<<<<<<<<<< * cdef int ierr = 0 * if obj != NULL: */ __pyx_v_obj = ((PetscObject)__pyx_v_pobj); /* "libpetsc4py.pyx":184 * cdef inline PetscObject newRef(void *pobj) nogil: * cdef PetscObject obj = pobj * cdef int ierr = 0 # <<<<<<<<<<<<<< * if obj != NULL: * ierr = PetscObjectReference(obj) */ __pyx_v_ierr = 0; /* "libpetsc4py.pyx":185 * cdef PetscObject obj = pobj * cdef int ierr = 0 * if obj != NULL: # <<<<<<<<<<<<<< * ierr = PetscObjectReference(obj) * if ierr: return NULL # XXX warning! */ __pyx_t_1 = ((__pyx_v_obj != NULL) != 0); if (__pyx_t_1) { /* "libpetsc4py.pyx":186 * cdef int ierr = 0 * if obj != NULL: * ierr = PetscObjectReference(obj) # <<<<<<<<<<<<<< * if ierr: return NULL # XXX warning! * return obj */ __pyx_v_ierr = PetscObjectReference(__pyx_v_obj); /* "libpetsc4py.pyx":187 * if obj != NULL: * ierr = PetscObjectReference(obj) * if ierr: return NULL # XXX warning! # <<<<<<<<<<<<<< * return obj * */ __pyx_t_1 = (__pyx_v_ierr != 0); 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} return 0; } /* PyObjectCallMethO */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg) { PyObject *self, *result; PyCFunction cfunc; cfunc = PyCFunction_GET_FUNCTION(func); self = PyCFunction_GET_SELF(func); if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object"))) return NULL; result = cfunc(self, arg); Py_LeaveRecursiveCall(); if (unlikely(!result) && unlikely(!PyErr_Occurred())) { PyErr_SetString( PyExc_SystemError, "NULL result without error in PyObject_Call"); } return result; } #endif /* PyObjectCallOneArg */ #if CYTHON_COMPILING_IN_CPYTHON static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) { PyObject *result; PyObject *args = PyTuple_New(1); if (unlikely(!args)) return NULL; Py_INCREF(arg); PyTuple_SET_ITEM(args, 0, arg); result = __Pyx_PyObject_Call(func, args, NULL); Py_DECREF(args); return result; } static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { #ifdef __Pyx_CyFunction_USED if (likely(PyCFunction_Check(func) || PyObject_TypeCheck(func, __pyx_CyFunctionType))) { #else if (likely(PyCFunction_Check(func))) { #endif if (likely(PyCFunction_GET_FLAGS(func) & METH_O)) { return __Pyx_PyObject_CallMethO(func, arg); } } return __Pyx__PyObject_CallOneArg(func, arg); } #else static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { PyObject *result; PyObject *args = PyTuple_Pack(1, arg); if (unlikely(!args)) return NULL; result = __Pyx_PyObject_Call(func, args, NULL); Py_DECREF(args); return result; } #endif /* PyObjectCallNoArg */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallNoArg(PyObject *func) { #ifdef __Pyx_CyFunction_USED if (likely(PyCFunction_Check(func) || PyObject_TypeCheck(func, __pyx_CyFunctionType))) { #else if (likely(PyCFunction_Check(func))) { #endif if (likely(PyCFunction_GET_FLAGS(func) & METH_NOARGS)) { return __Pyx_PyObject_CallMethO(func, NULL); } } return __Pyx_PyObject_Call(func, __pyx_empty_tuple, NULL); } #endif /* GetException */ #if CYTHON_COMPILING_IN_CPYTHON static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { #else static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) { #endif PyObject *local_type, *local_value, *local_tb; #if CYTHON_COMPILING_IN_CPYTHON PyObject *tmp_type, *tmp_value, *tmp_tb; local_type = tstate->curexc_type; local_value = tstate->curexc_value; local_tb = tstate->curexc_traceback; tstate->curexc_type = 0; tstate->curexc_value = 0; tstate->curexc_traceback = 0; #else PyErr_Fetch(&local_type, &local_value, &local_tb); #endif PyErr_NormalizeException(&local_type, &local_value, &local_tb); #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(tstate->curexc_type)) #else if (unlikely(PyErr_Occurred())) #endif goto bad; #if PY_MAJOR_VERSION >= 3 if (local_tb) { if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0)) goto bad; } #endif Py_XINCREF(local_tb); Py_XINCREF(local_type); Py_XINCREF(local_value); *type = local_type; *value = local_value; *tb = local_tb; #if CYTHON_COMPILING_IN_CPYTHON tmp_type = tstate->exc_type; tmp_value = tstate->exc_value; tmp_tb = tstate->exc_traceback; tstate->exc_type = local_type; tstate->exc_value = local_value; tstate->exc_traceback = local_tb; Py_XDECREF(tmp_type); Py_XDECREF(tmp_value); Py_XDECREF(tmp_tb); #else PyErr_SetExcInfo(local_type, local_value, local_tb); #endif return 0; bad: *type = 0; *value = 0; *tb = 0; Py_XDECREF(local_type); Py_XDECREF(local_value); Py_XDECREF(local_tb); return -1; } /* SwapException */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE void __Pyx__ExceptionSwap(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; tmp_type = tstate->exc_type; tmp_value = tstate->exc_value; tmp_tb = tstate->exc_traceback; tstate->exc_type = *type; tstate->exc_value = *value; tstate->exc_traceback = *tb; *type = tmp_type; *value = tmp_value; *tb = tmp_tb; } #else static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; PyErr_GetExcInfo(&tmp_type, &tmp_value, &tmp_tb); PyErr_SetExcInfo(*type, *value, *tb); *type = tmp_type; *value = tmp_value; *tb = tmp_tb; } #endif /* SaveResetException */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { *type = tstate->exc_type; *value = tstate->exc_value; *tb = tstate->exc_traceback; Py_XINCREF(*type); Py_XINCREF(*value); Py_XINCREF(*tb); } static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; tmp_type = tstate->exc_type; tmp_value = tstate->exc_value; tmp_tb = tstate->exc_traceback; tstate->exc_type = type; tstate->exc_value = value; tstate->exc_traceback = tb; Py_XDECREF(tmp_type); Py_XDECREF(tmp_value); Py_XDECREF(tmp_tb); } #endif /* GetAttr */ static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *o, PyObject *n) { #if CYTHON_COMPILING_IN_CPYTHON #if PY_MAJOR_VERSION >= 3 if (likely(PyUnicode_Check(n))) #else if (likely(PyString_Check(n))) #endif return __Pyx_PyObject_GetAttrStr(o, n); #endif return PyObject_GetAttr(o, n); } /* GetAttr3 */ static CYTHON_INLINE PyObject *__Pyx_GetAttr3(PyObject *o, PyObject *n, PyObject *d) { PyObject *r = __Pyx_GetAttr(o, n); if (unlikely(!r)) { if (!PyErr_ExceptionMatches(PyExc_AttributeError)) goto bad; PyErr_Clear(); r = d; Py_INCREF(d); } return r; bad: return NULL; } /* SetVTable */ static int __Pyx_SetVtable(PyObject *dict, void *vtable) { #if PY_VERSION_HEX >= 0x02070000 PyObject *ob = PyCapsule_New(vtable, 0, 0); #else PyObject *ob = PyCObject_FromVoidPtr(vtable, 0); #endif if (!ob) goto bad; if (PyDict_SetItem(dict, __pyx_n_s_pyx_vtable, ob) < 0) goto bad; Py_DECREF(ob); return 0; bad: Py_XDECREF(ob); return -1; } /* GetVTable */ static void* __Pyx_GetVtable(PyObject *dict) { void* ptr; PyObject *ob = PyObject_GetItem(dict, __pyx_n_s_pyx_vtable); if (!ob) goto bad; #if PY_VERSION_HEX >= 0x02070000 ptr = PyCapsule_GetPointer(ob, 0); #else ptr = PyCObject_AsVoidPtr(ob); #endif if (!ptr && !PyErr_Occurred()) PyErr_SetString(PyExc_RuntimeError, "invalid vtable found for imported type"); Py_DECREF(ob); return ptr; bad: Py_XDECREF(ob); return NULL; } /* Import */ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { PyObject *empty_list = 0; PyObject *module = 0; PyObject *global_dict = 0; PyObject *empty_dict = 0; PyObject *list; #if PY_VERSION_HEX < 0x03030000 PyObject *py_import; py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import); if (!py_import) goto bad; #endif if (from_list) list = from_list; else { empty_list = PyList_New(0); if (!empty_list) goto bad; list = empty_list; } global_dict = PyModule_GetDict(__pyx_m); if (!global_dict) goto bad; empty_dict = PyDict_New(); if (!empty_dict) goto bad; { #if PY_MAJOR_VERSION >= 3 if (level == -1) { if (strchr(__Pyx_MODULE_NAME, '.')) { #if PY_VERSION_HEX < 0x03030000 PyObject *py_level = PyInt_FromLong(1); if (!py_level) goto bad; module = PyObject_CallFunctionObjArgs(py_import, name, global_dict, empty_dict, list, py_level, NULL); Py_DECREF(py_level); #else module = PyImport_ImportModuleLevelObject( name, global_dict, empty_dict, list, 1); #endif if (!module) { if (!PyErr_ExceptionMatches(PyExc_ImportError)) goto bad; PyErr_Clear(); } } level = 0; } #endif if (!module) { #if PY_VERSION_HEX < 0x03030000 PyObject *py_level = PyInt_FromLong(level); if (!py_level) goto bad; module = PyObject_CallFunctionObjArgs(py_import, name, global_dict, empty_dict, list, py_level, NULL); Py_DECREF(py_level); #else module = PyImport_ImportModuleLevelObject( name, global_dict, empty_dict, list, level); #endif } } bad: #if PY_VERSION_HEX < 0x03030000 Py_XDECREF(py_import); #endif Py_XDECREF(empty_list); Py_XDECREF(empty_dict); return module; } /* ImportFrom */ static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name) { PyObject* value = __Pyx_PyObject_GetAttrStr(module, name); if (unlikely(!value) && PyErr_ExceptionMatches(PyExc_AttributeError)) { PyErr_Format(PyExc_ImportError, #if PY_MAJOR_VERSION < 3 "cannot import name %.230s", PyString_AS_STRING(name)); #else "cannot import name %S", name); #endif } return value; } /* ModuleImport */ #ifndef __PYX_HAVE_RT_ImportModule #define __PYX_HAVE_RT_ImportModule static PyObject *__Pyx_ImportModule(const char *name) { PyObject *py_name = 0; PyObject *py_module = 0; py_name = __Pyx_PyIdentifier_FromString(name); if (!py_name) goto bad; py_module = PyImport_Import(py_name); Py_DECREF(py_name); return py_module; bad: Py_XDECREF(py_name); return 0; } #endif /* RegisterModuleCleanup */ #if PY_MAJOR_VERSION < 3 static PyObject* __pyx_module_cleanup_atexit(PyObject *module, CYTHON_UNUSED PyObject *unused) { __pyx_module_cleanup(module); Py_INCREF(Py_None); return Py_None; } static int __Pyx_RegisterCleanup(void) { static PyMethodDef cleanup_def = { "__cleanup", (PyCFunction)__pyx_module_cleanup_atexit, METH_NOARGS, 0}; PyObject *cleanup_func = 0; PyObject *atexit = 0; PyObject *reg = 0; PyObject *args = 0; PyObject *res = 0; int ret = -1; cleanup_func = PyCFunction_New(&cleanup_def, 0); if (!cleanup_func) goto bad; atexit = __Pyx_ImportModule("atexit"); if (!atexit) goto bad; reg = PyObject_GetAttrString(atexit, "_exithandlers"); if (reg && PyList_Check(reg)) { PyObject *a, *kw; a = PyTuple_New(0); kw = PyDict_New(); if (!a || !kw) { Py_XDECREF(a); Py_XDECREF(kw); goto bad; } args = PyTuple_Pack(3, cleanup_func, a, kw); Py_DECREF(a); Py_DECREF(kw); if (!args) goto bad; ret = PyList_Insert(reg, 0, args); } else { if (!reg) PyErr_Clear(); Py_XDECREF(reg); reg = PyObject_GetAttrString(atexit, "register"); if (!reg) goto bad; args = PyTuple_Pack(1, cleanup_func); if (!args) goto bad; res = PyObject_CallObject(reg, args); if (!res) goto bad; ret = 0; } bad: Py_XDECREF(cleanup_func); Py_XDECREF(atexit); Py_XDECREF(reg); Py_XDECREF(args); Py_XDECREF(res); return ret; } #else static int __Pyx_RegisterCleanup(void) { if (0) __Pyx_ImportModule(NULL); return 0; } #endif /* CodeObjectCache */ static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { int start = 0, mid = 0, end = count - 1; if (end >= 0 && code_line > entries[end].code_line) { return count; } while (start < end) { mid = start + (end - start) / 2; if (code_line < entries[mid].code_line) { end = mid; } else if (code_line > entries[mid].code_line) { start = mid + 1; } else { return mid; } } if (code_line <= entries[mid].code_line) { return mid; } else { return mid + 1; } } static PyCodeObject *__pyx_find_code_object(int code_line) { PyCodeObject* code_object; int pos; if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) { return NULL; } pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line); if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) { return NULL; } code_object = __pyx_code_cache.entries[pos].code_object; Py_INCREF(code_object); return code_object; } static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) { int pos, i; __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries; if (unlikely(!code_line)) { return; } if (unlikely(!entries)) { entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry)); if (likely(entries)) { __pyx_code_cache.entries = entries; __pyx_code_cache.max_count = 64; __pyx_code_cache.count = 1; entries[0].code_line = code_line; entries[0].code_object = code_object; Py_INCREF(code_object); } return; } pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line); if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) { PyCodeObject* tmp = entries[pos].code_object; entries[pos].code_object = code_object; Py_DECREF(tmp); return; } if (__pyx_code_cache.count == __pyx_code_cache.max_count) { int new_max = __pyx_code_cache.max_count + 64; entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc( __pyx_code_cache.entries, (size_t)new_max*sizeof(__Pyx_CodeObjectCacheEntry)); if (unlikely(!entries)) { return; } __pyx_code_cache.entries = entries; __pyx_code_cache.max_count = new_max; } for (i=__pyx_code_cache.count; i>pos; i--) { entries[i] = entries[i-1]; } entries[pos].code_line = code_line; entries[pos].code_object = code_object; __pyx_code_cache.count++; Py_INCREF(code_object); } /* AddTraceback */ #include "compile.h" #include "frameobject.h" #include "traceback.h" static PyCodeObject* __Pyx_CreateCodeObjectForTraceback( const char *funcname, int c_line, int py_line, const char *filename) { PyCodeObject *py_code = 0; PyObject *py_srcfile = 0; PyObject *py_funcname = 0; #if PY_MAJOR_VERSION < 3 py_srcfile = PyString_FromString(filename); #else py_srcfile = PyUnicode_FromString(filename); #endif if (!py_srcfile) goto bad; if (c_line) { #if PY_MAJOR_VERSION < 3 py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line); #else py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line); #endif } else { #if PY_MAJOR_VERSION < 3 py_funcname = PyString_FromString(funcname); #else py_funcname = PyUnicode_FromString(funcname); #endif } if (!py_funcname) goto bad; py_code = __Pyx_PyCode_New( 0, 0, 0, 0, 0, __pyx_empty_bytes, /*PyObject *code,*/ __pyx_empty_tuple, /*PyObject *consts,*/ __pyx_empty_tuple, /*PyObject *names,*/ __pyx_empty_tuple, /*PyObject *varnames,*/ __pyx_empty_tuple, /*PyObject *freevars,*/ __pyx_empty_tuple, /*PyObject *cellvars,*/ py_srcfile, /*PyObject *filename,*/ py_funcname, /*PyObject *name,*/ py_line, __pyx_empty_bytes /*PyObject *lnotab*/ ); Py_DECREF(py_srcfile); Py_DECREF(py_funcname); return py_code; bad: Py_XDECREF(py_srcfile); Py_XDECREF(py_funcname); return NULL; } static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename) { PyCodeObject *py_code = 0; PyFrameObject *py_frame = 0; py_code = __pyx_find_code_object(c_line ? c_line : py_line); if (!py_code) { py_code = __Pyx_CreateCodeObjectForTraceback( funcname, c_line, py_line, filename); if (!py_code) goto bad; __pyx_insert_code_object(c_line ? c_line : py_line, py_code); } py_frame = PyFrame_New( PyThreadState_GET(), /*PyThreadState *tstate,*/ py_code, /*PyCodeObject *code,*/ __pyx_d, /*PyObject *globals,*/ 0 /*PyObject *locals*/ ); if (!py_frame) goto bad; py_frame->f_lineno = py_line; PyTraceBack_Here(py_frame); bad: Py_XDECREF(py_code); Py_XDECREF(py_frame); } /* None */ static CYTHON_INLINE int __Pyx_ErrOccurredWithGIL(void) { int err; #ifdef WITH_THREAD PyGILState_STATE _save = PyGILState_Ensure(); #endif err = !!PyErr_Occurred(); #ifdef WITH_THREAD PyGILState_Release(_save); #endif return err; } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscInt(PetscInt value) { const PetscInt neg_one = (PetscInt) -1, const_zero = (PetscInt) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PetscInt) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscInt) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PetscInt) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PetscInt) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscInt) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PetscInt), little, !is_unsigned); } } /* CIntFromPyVerify */ #define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\ __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 0) #define __PYX_VERIFY_RETURN_INT_EXC(target_type, func_type, func_value)\ __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 1) #define __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, exc)\ {\ func_type value = func_value;\ if (sizeof(target_type) < sizeof(func_type)) {\ if (unlikely(value != (func_type) (target_type) value)) {\ func_type zero = 0;\ if (exc && unlikely(value == (func_type)-1 && PyErr_Occurred()))\ return (target_type) -1;\ if (is_unsigned && unlikely(value < zero))\ goto raise_neg_overflow;\ else\ goto raise_overflow;\ }\ }\ return (target_type) value;\ } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { const long neg_one = (long) -1, const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(long) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(long) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(long) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(long), little, !is_unsigned); } } /* PyExec */ static CYTHON_INLINE PyObject* __Pyx_PyExec2(PyObject* o, PyObject* globals) { return __Pyx_PyExec3(o, globals, NULL); } static PyObject* __Pyx_PyExec3(PyObject* o, PyObject* globals, PyObject* locals) { PyObject* result; PyObject* s = 0; char *code = 0; if (!globals || globals == Py_None) { globals = __pyx_d; } else if (!PyDict_Check(globals)) { PyErr_Format(PyExc_TypeError, "exec() arg 2 must be a dict, not %.200s", Py_TYPE(globals)->tp_name); goto bad; } if (!locals || locals == Py_None) { locals = globals; } if (PyDict_GetItem(globals, __pyx_n_s_builtins) == NULL) { if (PyDict_SetItem(globals, __pyx_n_s_builtins, PyEval_GetBuiltins()) < 0) goto bad; } if (PyCode_Check(o)) { if (PyCode_GetNumFree((PyCodeObject *)o) > 0) { PyErr_SetString(PyExc_TypeError, "code object passed to exec() may not contain free variables"); goto bad; } #if CYTHON_COMPILING_IN_PYPY || PY_VERSION_HEX < 0x030200B1 result = PyEval_EvalCode((PyCodeObject *)o, globals, locals); #else result = PyEval_EvalCode(o, globals, locals); #endif } else { PyCompilerFlags cf; cf.cf_flags = 0; if (PyUnicode_Check(o)) { cf.cf_flags = PyCF_SOURCE_IS_UTF8; s = PyUnicode_AsUTF8String(o); if (!s) goto bad; o = s; #if PY_MAJOR_VERSION >= 3 } else if (!PyBytes_Check(o)) { #else } else if (!PyString_Check(o)) { #endif PyErr_Format(PyExc_TypeError, "exec: arg 1 must be string, bytes or code object, got %.200s", Py_TYPE(o)->tp_name); goto bad; } #if PY_MAJOR_VERSION >= 3 code = PyBytes_AS_STRING(o); #else code = PyString_AS_STRING(o); #endif if (PyEval_MergeCompilerFlags(&cf)) { result = PyRun_StringFlags(code, Py_file_input, globals, locals, &cf); } else { result = PyRun_String(code, Py_file_input, globals, locals); } Py_XDECREF(s); } return result; bad: Py_XDECREF(s); return 0; } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_PetscBool(PetscBool value) { const PetscBool neg_one = (PetscBool) -1, const_zero = (PetscBool) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(PetscBool) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscBool) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(PetscBool) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(PetscBool) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(PetscBool) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(PetscBool), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { const int neg_one = (int) -1, const_zero = (int) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(int) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(int) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(int) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(int), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_MatSORType(MatSORType value) { const MatSORType neg_one = (MatSORType) -1, const_zero = (MatSORType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(MatSORType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatSORType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(MatSORType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(MatSORType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(MatSORType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(MatSORType), little, !is_unsigned); } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_NormType(NormType value) { const NormType neg_one = (NormType) -1, const_zero = (NormType) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(NormType) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(NormType) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); } else if (sizeof(NormType) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); } } else { if (sizeof(NormType) <= sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(NormType) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); } } { int one = 1; int little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&value; return _PyLong_FromByteArray(bytes, sizeof(NormType), little, !is_unsigned); } } /* CIntFromPy */ static CYTHON_INLINE PetscInt __Pyx_PyInt_As_PetscInt(PyObject *x) { const PetscInt neg_one = (PetscInt) -1, const_zero = (PetscInt) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(PetscInt) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(PetscInt, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (PetscInt) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PetscInt) 0; case 1: __PYX_VERIFY_RETURN_INT(PetscInt, digit, digits[0]) case 2: if (8 * sizeof(PetscInt) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) >= 2 * PyLong_SHIFT) { return (PetscInt) (((((PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0])); } } break; case 3: if (8 * sizeof(PetscInt) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) >= 3 * PyLong_SHIFT) { return (PetscInt) (((((((PetscInt)digits[2]) << PyLong_SHIFT) | (PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0])); } } break; case 4: if (8 * sizeof(PetscInt) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) >= 4 * PyLong_SHIFT) { return (PetscInt) (((((((((PetscInt)digits[3]) << PyLong_SHIFT) | (PetscInt)digits[2]) << PyLong_SHIFT) | (PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (PetscInt) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(PetscInt) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(PetscInt, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(PetscInt) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PetscInt, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (PetscInt) 0; case -1: __PYX_VERIFY_RETURN_INT(PetscInt, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(PetscInt, digit, +digits[0]) case -2: if (8 * sizeof(PetscInt) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) - 1 > 2 * PyLong_SHIFT) { return (PetscInt) (((PetscInt)-1)*(((((PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0]))); } } break; case 2: if (8 * sizeof(PetscInt) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) - 1 > 2 * PyLong_SHIFT) { return (PetscInt) ((((((PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0]))); } } break; case -3: if (8 * sizeof(PetscInt) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) - 1 > 3 * PyLong_SHIFT) { return (PetscInt) (((PetscInt)-1)*(((((((PetscInt)digits[2]) << PyLong_SHIFT) | (PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0]))); } } break; case 3: if (8 * sizeof(PetscInt) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) - 1 > 3 * PyLong_SHIFT) { return (PetscInt) ((((((((PetscInt)digits[2]) << PyLong_SHIFT) | (PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0]))); } } break; case -4: if (8 * sizeof(PetscInt) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) - 1 > 4 * PyLong_SHIFT) { return (PetscInt) (((PetscInt)-1)*(((((((((PetscInt)digits[3]) << PyLong_SHIFT) | (PetscInt)digits[2]) << PyLong_SHIFT) | (PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0]))); } } break; case 4: if (8 * sizeof(PetscInt) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(PetscInt, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(PetscInt) - 1 > 4 * PyLong_SHIFT) { return (PetscInt) ((((((((((PetscInt)digits[3]) << PyLong_SHIFT) | (PetscInt)digits[2]) << PyLong_SHIFT) | (PetscInt)digits[1]) << PyLong_SHIFT) | (PetscInt)digits[0]))); } } break; } #endif if (sizeof(PetscInt) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(PetscInt, long, PyLong_AsLong(x)) } else if (sizeof(PetscInt) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(PetscInt, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else PetscInt val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (PetscInt) -1; } } else { PetscInt val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (PetscInt) -1; val = __Pyx_PyInt_As_PetscInt(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to PetscInt"); return (PetscInt) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to PetscInt"); return (PetscInt) -1; } /* CIntFromPy */ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { const long neg_one = (long) -1, const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(long) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(long, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (long) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (long) 0; case 1: __PYX_VERIFY_RETURN_INT(long, digit, digits[0]) case 2: if (8 * sizeof(long) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) >= 2 * PyLong_SHIFT) { return (long) (((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; case 3: if (8 * sizeof(long) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) >= 3 * PyLong_SHIFT) { return (long) (((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; case 4: if (8 * sizeof(long) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) >= 4 * PyLong_SHIFT) { return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (long) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(long) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(long, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(long, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (long) 0; case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(long, digit, +digits[0]) case -2: if (8 * sizeof(long) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { return (long) (((long)-1)*(((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 2: if (8 * sizeof(long) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { return (long) ((((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case -3: if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { return (long) (((long)-1)*(((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 3: if (8 * sizeof(long) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { return (long) ((((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case -4: if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { return (long) (((long)-1)*(((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 4: if (8 * sizeof(long) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { return (long) ((((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; } #endif if (sizeof(long) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(long, long, PyLong_AsLong(x)) } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(long, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else long val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (long) -1; } } else { long val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (long) -1; val = __Pyx_PyInt_As_long(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to long"); return (long) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to long"); return (long) -1; } /* CIntFromPy */ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { const int neg_one = (int) -1, const_zero = (int) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if (sizeof(int) < sizeof(long)) { __PYX_VERIFY_RETURN_INT(int, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (int) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (int) 0; case 1: __PYX_VERIFY_RETURN_INT(int, digit, digits[0]) case 2: if (8 * sizeof(int) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) >= 2 * PyLong_SHIFT) { return (int) (((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; case 3: if (8 * sizeof(int) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) >= 3 * PyLong_SHIFT) { return (int) (((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; case 4: if (8 * sizeof(int) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) >= 4 * PyLong_SHIFT) { return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; } #endif #if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (int) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if (sizeof(int) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(int, unsigned long, PyLong_AsUnsignedLong(x)) } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(int, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (int) 0; case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(int, digit, +digits[0]) case -2: if (8 * sizeof(int) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { return (int) (((int)-1)*(((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 2: if (8 * sizeof(int) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { return (int) ((((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case -3: if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { return (int) (((int)-1)*(((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 3: if (8 * sizeof(int) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { return (int) ((((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case -4: if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { return (int) (((int)-1)*(((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 4: if (8 * sizeof(int) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { return (int) ((((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; } #endif if (sizeof(int) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(int, long, PyLong_AsLong(x)) } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(int, PY_LONG_LONG, PyLong_AsLongLong(x)) } } { #if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else int val; PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; v = PyNumber_Long(tmp); Py_DECREF(tmp); } #endif if (likely(v)) { int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; int ret = _PyLong_AsByteArray((PyLongObject *)v, bytes, sizeof(val), is_little, !is_unsigned); Py_DECREF(v); if (likely(!ret)) return val; } #endif return (int) -1; } } else { int val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (int) -1; val = __Pyx_PyInt_As_int(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to int"); return (int) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to int"); return (int) -1; } /* CheckBinaryVersion */ static int __Pyx_check_binary_version(void) { char ctversion[4], rtversion[4]; PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION); PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion()); if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) { char message[200]; PyOS_snprintf(message, sizeof(message), "compiletime version %s of module '%.100s' " "does not match runtime version %s", ctversion, __Pyx_MODULE_NAME, rtversion); return PyErr_WarnEx(NULL, message, 1); } return 0; } /* TypeImport */ #ifndef __PYX_HAVE_RT_ImportType #define __PYX_HAVE_RT_ImportType static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict) { PyObject *py_module = 0; PyObject *result = 0; PyObject *py_name = 0; char warning[200]; Py_ssize_t basicsize; #ifdef Py_LIMITED_API PyObject *py_basicsize; #endif py_module = __Pyx_ImportModule(module_name); if (!py_module) goto bad; py_name = __Pyx_PyIdentifier_FromString(class_name); if (!py_name) goto bad; result = PyObject_GetAttr(py_module, py_name); Py_DECREF(py_name); py_name = 0; Py_DECREF(py_module); py_module = 0; if (!result) goto bad; if (!PyType_Check(result)) { PyErr_Format(PyExc_TypeError, "%.200s.%.200s is not a type object", module_name, class_name); goto bad; } #ifndef Py_LIMITED_API basicsize = ((PyTypeObject *)result)->tp_basicsize; #else py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); if (!py_basicsize) goto bad; basicsize = PyLong_AsSsize_t(py_basicsize); Py_DECREF(py_basicsize); py_basicsize = 0; if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) goto bad; #endif if (!strict && (size_t)basicsize > size) { PyOS_snprintf(warning, sizeof(warning), "%s.%s size changed, may indicate binary incompatibility. Expected %zd, got %zd", module_name, class_name, basicsize, size); if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; } else if ((size_t)basicsize != size) { PyErr_Format(PyExc_ValueError, "%.200s.%.200s has the wrong size, try recompiling. Expected %zd, got %zd", module_name, class_name, basicsize, size); goto bad; } return (PyTypeObject *)result; bad: Py_XDECREF(py_module); Py_XDECREF(result); return NULL; } #endif /* FunctionImport */ #ifndef __PYX_HAVE_RT_ImportFunction #define __PYX_HAVE_RT_ImportFunction static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) { PyObject *d = 0; PyObject *cobj = 0; union { void (*fp)(void); void *p; } tmp; d = PyObject_GetAttrString(module, (char *)"__pyx_capi__"); if (!d) goto bad; cobj = PyDict_GetItemString(d, funcname); if (!cobj) { PyErr_Format(PyExc_ImportError, "%.200s does not export expected C function %.200s", PyModule_GetName(module), funcname); goto bad; } #if PY_VERSION_HEX >= 0x02070000 if (!PyCapsule_IsValid(cobj, sig)) { PyErr_Format(PyExc_TypeError, "C function %.200s.%.200s has wrong signature (expected %.500s, got %.500s)", PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj)); goto bad; } tmp.p = PyCapsule_GetPointer(cobj, sig); #else {const char *desc, *s1, *s2; desc = (const char *)PyCObject_GetDesc(cobj); if (!desc) goto bad; s1 = desc; s2 = sig; while (*s1 != '\0' && *s1 == *s2) { s1++; s2++; } if (*s1 != *s2) { PyErr_Format(PyExc_TypeError, "C function %.200s.%.200s has wrong signature (expected %.500s, got %.500s)", PyModule_GetName(module), funcname, sig, desc); goto bad; } tmp.p = PyCObject_AsVoidPtr(cobj);} #endif *f = tmp.fp; if (!(*f)) goto bad; Py_DECREF(d); return 0; bad: Py_XDECREF(d); return -1; } #endif /* InitStrings */ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { while (t->p) { #if PY_MAJOR_VERSION < 3 if (t->is_unicode) { *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL); } else if (t->intern) { *t->p = PyString_InternFromString(t->s); } else { *t->p = PyString_FromStringAndSize(t->s, t->n - 1); } #else if (t->is_unicode | t->is_str) { if (t->intern) { *t->p = PyUnicode_InternFromString(t->s); } else if (t->encoding) { *t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL); } else { *t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1); } } else { *t->p = PyBytes_FromStringAndSize(t->s, t->n - 1); } #endif if (!*t->p) return -1; ++t; } return 0; } static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) { return __Pyx_PyUnicode_FromStringAndSize(c_str, (Py_ssize_t)strlen(c_str)); } static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) { Py_ssize_t ignore; return __Pyx_PyObject_AsStringAndSize(o, &ignore); } static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { #if CYTHON_COMPILING_IN_CPYTHON && (__PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT) if ( #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII __Pyx_sys_getdefaultencoding_not_ascii && #endif PyUnicode_Check(o)) { #if PY_VERSION_HEX < 0x03030000 char* defenc_c; PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); if (!defenc) return NULL; defenc_c = PyBytes_AS_STRING(defenc); #if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII { char* end = defenc_c + PyBytes_GET_SIZE(defenc); char* c; for (c = defenc_c; c < end; c++) { if ((unsigned char) (*c) >= 128) { PyUnicode_AsASCIIString(o); return NULL; } } } #endif *length = PyBytes_GET_SIZE(defenc); return defenc_c; #else if (__Pyx_PyUnicode_READY(o) == -1) return NULL; #if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII if (PyUnicode_IS_ASCII(o)) { *length = PyUnicode_GET_LENGTH(o); return PyUnicode_AsUTF8(o); } else { PyUnicode_AsASCIIString(o); return NULL; } #else return PyUnicode_AsUTF8AndSize(o, length); #endif #endif } else #endif #if (!CYTHON_COMPILING_IN_PYPY) || (defined(PyByteArray_AS_STRING) && defined(PyByteArray_GET_SIZE)) if (PyByteArray_Check(o)) { *length = PyByteArray_GET_SIZE(o); return PyByteArray_AS_STRING(o); } else #endif { char* result; int r = PyBytes_AsStringAndSize(o, &result, length); if (unlikely(r < 0)) { return NULL; } else { return result; } } } static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) { int is_true = x == Py_True; if (is_true | (x == Py_False) | (x == Py_None)) return is_true; else return PyObject_IsTrue(x); } static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x) { PyNumberMethods *m; const char *name = NULL; PyObject *res = NULL; #if PY_MAJOR_VERSION < 3 if (PyInt_Check(x) || PyLong_Check(x)) #else if (PyLong_Check(x)) #endif return __Pyx_NewRef(x); m = Py_TYPE(x)->tp_as_number; #if PY_MAJOR_VERSION < 3 if (m && m->nb_int) { name = "int"; res = PyNumber_Int(x); } else if (m && m->nb_long) { name = "long"; res = PyNumber_Long(x); } #else if (m && m->nb_int) { name = "int"; res = PyNumber_Long(x); } #endif if (res) { #if PY_MAJOR_VERSION < 3 if (!PyInt_Check(res) && !PyLong_Check(res)) { #else if (!PyLong_Check(res)) { #endif PyErr_Format(PyExc_TypeError, "__%.4s__ returned non-%.4s (type %.200s)", name, name, Py_TYPE(res)->tp_name); Py_DECREF(res); return NULL; } } else if (!PyErr_Occurred()) { PyErr_SetString(PyExc_TypeError, "an integer is required"); } return res; } static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { Py_ssize_t ival; PyObject *x; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_CheckExact(b))) { if (sizeof(Py_ssize_t) >= sizeof(long)) return PyInt_AS_LONG(b); else return PyInt_AsSsize_t(x); } #endif if (likely(PyLong_CheckExact(b))) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)b)->ob_digit; const Py_ssize_t size = Py_SIZE(b); if (likely(__Pyx_sst_abs(size) <= 1)) { ival = likely(size) ? digits[0] : 0; if (size == -1) ival = -ival; return ival; } else { switch (size) { case 2: if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { return (Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -2: if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { return -(Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case 3: if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { return (Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -3: if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { return -(Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case 4: if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { return (Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -4: if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { return -(Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; } } #endif return PyLong_AsSsize_t(b); } x = PyNumber_Index(b); if (!x) return -1; ival = PyInt_AsSsize_t(x); Py_DECREF(x); return ival; } static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { return PyInt_FromSize_t(ival); } #endif /* Py_PYTHON_H */ petsc4py-3.7.0/src/libpetsc4py/libpetsc4py.h0000644000175000001440000000257712711405032021533 0ustar dalcinlusers00000000000000/* Generated by Cython 0.24 */ #ifndef __PYX_HAVE__libpetsc4py #define __PYX_HAVE__libpetsc4py #ifndef __PYX_HAVE_API__libpetsc4py #ifndef __PYX_EXTERN_C #ifdef __cplusplus #define __PYX_EXTERN_C extern "C" #else #define __PYX_EXTERN_C extern #endif #endif #ifndef DL_IMPORT #define DL_IMPORT(_T) _T #endif __PYX_EXTERN_C DL_IMPORT(int) import_libpetsc4py(void); __PYX_EXTERN_C DL_IMPORT(PetscErrorCode) MatPythonGetContext(Mat, void **); __PYX_EXTERN_C DL_IMPORT(PetscErrorCode) MatPythonSetContext(Mat, void *); __PYX_EXTERN_C DL_IMPORT(PetscErrorCode) PCPythonGetContext(PC, void **); __PYX_EXTERN_C DL_IMPORT(PetscErrorCode) PCPythonSetContext(PC, void *); __PYX_EXTERN_C DL_IMPORT(PetscErrorCode) KSPPythonGetContext(KSP, void **); __PYX_EXTERN_C DL_IMPORT(PetscErrorCode) KSPPythonSetContext(KSP, void *); __PYX_EXTERN_C DL_IMPORT(PetscErrorCode) SNESPythonGetContext(SNES, void **); __PYX_EXTERN_C DL_IMPORT(PetscErrorCode) SNESPythonSetContext(SNES, void *); __PYX_EXTERN_C DL_IMPORT(PetscErrorCode) TSPythonGetContext(TS, void **); __PYX_EXTERN_C DL_IMPORT(PetscErrorCode) TSPythonSetContext(TS, void *); __PYX_EXTERN_C DL_IMPORT(PetscErrorCode) PetscPythonRegisterAll(void); #endif /* !__PYX_HAVE_API__libpetsc4py */ #if PY_MAJOR_VERSION < 3 PyMODINIT_FUNC initlibpetsc4py(void); #else PyMODINIT_FUNC PyInit_libpetsc4py(void); #endif #endif /* !__PYX_HAVE__libpetsc4py */ petsc4py-3.7.0/src/libpetsc4py/custom.h0000644000175000001440000000640412711377604020611 0ustar dalcinlusers00000000000000#include "petsc/private/vecimpl.h" #include "petsc/private/matimpl.h" #include "petsc/private/pcimpl.h" #include "petsc/private/kspimpl.h" #include "petsc/private/snesimpl.h" #include "petsc/private/tsimpl.h" EXTERN_C_BEGIN extern PetscErrorCode (*PetscPythonMonitorSet_C)(PetscObject,const char*); EXTERN_C_END #undef __FUNCT__ #define __FUNCT__ "KSPLogHistory" PETSC_STATIC_INLINE PetscErrorCode KSPLogHistory(KSP ksp,PetscReal rnorm) { PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(ksp,KSP_CLASSID,1); ierr = KSPLogResidualHistory(ksp,rnorm);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESLogHistory" PETSC_STATIC_INLINE PetscErrorCode SNESLogHistory(SNES snes,PetscReal rnorm,PetscInt lits) { PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(snes,SNES_CLASSID,1); ierr = SNESLogConvergenceHistory(snes,rnorm,lits);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "KSPConverged" PETSC_STATIC_INLINE PetscErrorCode KSPConverged(KSP ksp, PetscInt iter,PetscReal rnorm, KSPConvergedReason *reason) { PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(ksp,KSP_CLASSID,1); if (reason) PetscValidPointer(reason,2); if (!iter) ksp->rnorm0 = rnorm; if (!iter) { ksp->reason = KSP_CONVERGED_ITERATING; ksp->ttol = PetscMax(rnorm*ksp->rtol,ksp->abstol); } if (ksp->converged) { ierr = (*ksp->converged)(ksp,iter,rnorm,&ksp->reason,ksp->cnvP);CHKERRQ(ierr); } else { ierr = KSPConvergedSkip(ksp,iter,rnorm,&ksp->reason,NULL);CHKERRQ(ierr); /*ierr = KSPConvergedDefault(ksp,iter,rnorm,&ksp->reason,NULL);CHKERRQ(ierr);*/ } ksp->rnorm = rnorm; if (reason) *reason = ksp->reason; PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "SNESConverged" PETSC_STATIC_INLINE PetscErrorCode SNESConverged(SNES snes, PetscInt iter,PetscReal xnorm,PetscReal ynorm,PetscReal fnorm, SNESConvergedReason *reason) { PetscErrorCode ierr; PetscFunctionBegin; PetscValidHeaderSpecific(snes,SNES_CLASSID,1); if (reason) PetscValidPointer(reason,2); if (!iter) { snes->reason = SNES_CONVERGED_ITERATING; snes->ttol = fnorm*snes->rtol; } if (snes->ops->converged) { ierr = (*snes->ops->converged)(snes,iter,xnorm,ynorm,fnorm,&snes->reason,snes->cnvP);CHKERRQ(ierr); } else { ierr = SNESConvergedSkip(snes,iter,xnorm,ynorm,fnorm,&snes->reason,0);CHKERRQ(ierr); /*ierr = SNESConvergedDefault(snes,iter,xnorm,ynorm,fnorm,&snes->reason,0);CHKERRQ(ierr);*/ } snes->norm = fnorm; if (reason) *reason = snes->reason; PetscFunctionReturn(0); } #ifndef PETSC_ERR_PYTHON #define PETSC_ERR_PYTHON ((PetscErrorCode)(-1)) #endif #define PetscERROR(comm,FUNCT,n,t,msg,arg) \ PetscError(comm,__LINE__,FUNCT,__FILE__,n,t,msg,arg) #if PY_MAJOR_VERSION < 3 PyMODINIT_FUNC initlibpetsc4py(void); #else PyMODINIT_FUNC PyInit_libpetsc4py(void); static void initlibpetsc4py(void) { PyObject *M, *m; M = PyImport_GetModuleDict(); if (!M) return; m = PyInit_libpetsc4py(); if (!m) return; PyDict_SetItemString(M, "libpetsc4py", m); Py_DECREF(m); } #endif #undef __FUNCT__ #define __FUNCT__ "" petsc4py-3.7.0/src/__init__.py0000644000175000001440000000364012711377604016774 0ustar dalcinlusers00000000000000# Author: Lisandro Dalcin # Contact: dalcinl@gmail.com # -------------------------------------------------------------------- """ PETSc for Python ================ This package is an interface to PETSc libraries. PETSc_ (the Portable, Extensible Toolkit for Scientific Computation) is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. It employs the MPI_ standard for all message-passing communication. .. _PETSc: http://www.mcs.anl.gov/petsc .. _MPI: http://www.mpi-forum.org """ __author__ = 'Lisandro Dalcin' __version__ = '3.7.0' __credits__ = 'PETSc Team ' # -------------------------------------------------------------------- def init(args=None, arch=None, comm=None): """ Initialize PETSc. :Parameters: - `args`: command-line arguments, usually the 'sys.argv' list. - `arch`: specific configuration to use. - `comm`: MPI commmunicator .. note:: This function should be called only once, typically at the very beginning of the bootstrap script of an application. """ import petsc4py.lib PETSc = petsc4py.lib.ImportPETSc(arch) args = petsc4py.lib.getInitArgs(args) PETSc._initialize(args, comm) # -------------------------------------------------------------------- def get_include(): """ Return the directory in the package that contains header files. Extension modules that need to compile against petsc4py should use this function to locate the appropriate include directory. Using Python distutils (or perhaps NumPy distutils):: import petsc4py Extension('extension_name', ... include_dirs=[..., petsc4py.get_include()]) """ from os.path import dirname, join return join(dirname(__file__), 'include') # -------------------------------------------------------------------- petsc4py-3.7.0/README.rst0000644000175000001440000000110512711377604015555 0ustar dalcinlusers00000000000000================ PETSc for Python ================ Overview -------- Welcome to PETSc for Python. This package provides Python bindings for PETSc_, the *Portable, Extensible Toolkit for Scientific Computation*. Dependencies ------------ * A matching version of PETSc_ built with *shared/dynamic libraries*. * Python_ 2.6, 2.7, 3.2 or above. * A recent NumPy_ release. * To work with the in-development version, you need Cython_. .. _PETSc: http://www.mcs.anl.gov/petsc/ .. _Python: http://www.python.org .. _NumPy: http://www.numpy.org .. _Cython: http://www.cython.org petsc4py-3.7.0/setup.cfg0000644000175000001440000000050212711405164015700 0ustar dalcinlusers00000000000000[config] petsc_dir = $PETSC_DIR petsc_arch = $PETSC_ARCH [build] debug = 0 [sdist] force_manifest = 1 [nosetests] where = test [bdist_rpm] packager = Lisandro Dalcin group = Libraries/Python doc_files = README.rst CHANGES.rst LICENSE.rst [egg_info] tag_build = tag_date = 0 tag_svn_revision = 0 petsc4py-3.7.0/LICENSE.rst0000644000175000001440000000263112711377604015707 0ustar dalcinlusers00000000000000========================= LICENSE: PETSc for Python ========================= :Author: Lisandro Dalcin :Contact: dalcinl@gmail.com Copyright (c) 2016, Lisandro Dalcin. All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: * Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. * Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDER AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. petsc4py-3.7.0/PKG-INFO0000644000175000001440000000561512711405164015166 0ustar dalcinlusers00000000000000Metadata-Version: 1.1 Name: petsc4py Version: 3.7.0 Summary: PETSc for Python Home-page: https://bitbucket.org/petsc/petsc4py/ Author: Lisandro Dalcin Author-email: dalcinl@gmail.com License: BSD Download-URL: https://bitbucket.org/petsc/petsc4py/downloads/petsc4py-3.7.0.tar.gz Description: PETSc for Python ================ Python bindings for PETSc. Install ------- If you have a working MPI implementation and the ``mpicc`` compiler wrapper is on your search path, it highly recommended to install ``mpi4py`` first:: $ pip install mpi4py Ensure you have NumPy installed:: $ pip install numpy and finally:: $ pip install petsc petsc4py You can also install the in-development version of petsc4py with:: $ pip install Cython numpy mpi4py $ pip install --no-deps git+https://bitbucket.org/petsc/petsc $ pip install --no-deps git+https://bitbucket.org/petsc/petsc4py or:: $ pip install Cython numpy mpi4py $ pip install --no-deps https://bitbucket.org/petsc/petsc/get/master.tar.gz $ pip install --no-deps https://bitbucket.org/petsc/petsc4py/get/master.tar.gz Citations --------- If PETSc for Python been significant to a project that leads to an academic publication, please acknowledge that fact by citing the project. * L. Dalcin, P. Kler, R. Paz, and A. Cosimo, *Parallel Distributed Computing using Python*, Advances in Water Resources, 34(9):1124-1139, 2011. http://dx.doi.org/10.1016/j.advwatres.2011.04.013 * S. Balay, S. Abhyankar, M.F. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W.D. Gropp, D. Karpeyev, D. Kaushik, M.G. Knepley, L. Curfman McInnes, K. Rupp, B.F. Smith, S. Zampini, H. Zhang, and H. Zhang, *PETSc Users Manual*, ANL-95/11 - Revision 3.7, 2016. http://www.mcs.anl.gov/petsc/petsc-current/docs/manual.pdf Keywords: scientific computing,parallel computing,PETSc,MPI Platform: POSIX Classifier: License :: OSI Approved :: BSD License Classifier: Operating System :: POSIX Classifier: Intended Audience :: Developers Classifier: Intended Audience :: Science/Research Classifier: Programming Language :: C Classifier: Programming Language :: C++ Classifier: Programming Language :: Cython Classifier: Programming Language :: Python Classifier: Programming Language :: Python :: 2 Classifier: Programming Language :: Python :: 3 Classifier: Topic :: Scientific/Engineering Classifier: Topic :: Software Development :: Libraries :: Python Modules Classifier: Development Status :: 5 - Production/Stable Requires: numpy Provides: petsc4py petsc4py-3.7.0/petsc4py.egg-info/0000755000175000001440000000000012711405164017327 5ustar dalcinlusers00000000000000petsc4py-3.7.0/petsc4py.egg-info/top_level.txt0000644000175000001440000000001112711405164022051 0ustar dalcinlusers00000000000000petsc4py petsc4py-3.7.0/petsc4py.egg-info/SOURCES.txt0000644000175000001440000003440612711405164021222 0ustar dalcinlusers00000000000000CHANGES.rst DESCRIPTION.rst LICENSE.rst MANIFEST.in README.rst setup.cfg setup.py conf/__init__.py conf/baseconf.py conf/cythonize.py conf/epydoc.cfg conf/epydocify.py conf/metadata.py conf/petscconf.py demo/makefile demo/binary-io/makefile demo/binary-io/matvecio.py demo/bratu2d/bratu2d.py demo/bratu2d/bratu2df90.f90 demo/bratu2d/bratu2dnpy.py demo/bratu2d/makefile demo/bratu3d/bratu3d.py demo/bratu3d/makefile demo/dmplex/distribute_field.py demo/kspsolve/makefile demo/kspsolve/petsc-cg.py demo/kspsolve/petsc-ksp.py demo/kspsolve/petsc-mat.py demo/kspsolve/test_mat_cg.py demo/kspsolve/test_mat_ksp.py demo/ode/ce.py demo/ode/heat.py demo/ode/orego.py demo/ode/rober.py demo/perftest/App.f90 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src/PETSc/Options.pyx src/PETSc/PC.pyx src/PETSc/PETSc.pyx src/PETSc/Partitioner.pyx src/PETSc/Random.pyx src/PETSc/SF.pyx src/PETSc/SNES.pyx src/PETSc/Scatter.pyx src/PETSc/Section.pyx src/PETSc/Sys.pyx src/PETSc/TAO.pyx src/PETSc/TS.pyx src/PETSc/Vec.pyx src/PETSc/Viewer.pyx src/PETSc/arraynpy.pxi src/PETSc/cyclicgc.pxi src/PETSc/petscao.pxi src/PETSc/petscdef.pxi src/PETSc/petscdm.pxi src/PETSc/petscdmcomposite.pxi src/PETSc/petscdmda.pxi src/PETSc/petscdmplex.pxi src/PETSc/petscdmshell.pxi src/PETSc/petscis.pxi src/PETSc/petscksp.pxi src/PETSc/petsclog.pxi src/PETSc/petscmat.pxi src/PETSc/petscmem.pxi src/PETSc/petscmpi.pxi src/PETSc/petscobj.pxi src/PETSc/petscopt.pxi src/PETSc/petscpartitioner.pxi src/PETSc/petscpc.pxi src/PETSc/petscrand.pxi src/PETSc/petscsct.pxi src/PETSc/petscsec.pxi src/PETSc/petscsf.pxi src/PETSc/petscsnes.pxi src/PETSc/petscsys.pxi src/PETSc/petsctao.pxi src/PETSc/petscts.pxi src/PETSc/petscvec.pxi src/PETSc/petscvwr.pxi src/include/compat.h src/include/custom.h src/include/cython.h src/include/initpkg.h src/include/pep3118.h src/include/scalar.h src/include/compat/hdf5.h src/include/compat/hypre.h src/include/compat/mpi.h src/include/compat/mumps.h src/include/compat/tao.h src/include/petsc4py/PETSc.pxd src/include/petsc4py/__init__.pxd src/include/petsc4py/__init__.pyx src/include/petsc4py/numpy.h src/include/petsc4py/petsc4py.PETSc.h src/include/petsc4py/petsc4py.PETSc_api.h src/include/petsc4py/petsc4py.h src/include/petsc4py/petsc4py.i src/lib/__init__.py src/lib/petsc.cfg src/libpetsc4py/custom.h src/libpetsc4py/libpetsc4py.c src/libpetsc4py/libpetsc4py.h src/libpetsc4py/libpetsc4py.pyx test/runtests.py test/test_comm.py test/test_dmda.py test/test_dmplex.py test/test_dmshell.py test/test_gc.py test/test_is.py test/test_ksp.py test/test_ksp_py.py test/test_lgmap.py test/test_log.py test/test_mat_aij.py test/test_mat_dense.py test/test_mat_fact.py test/test_mat_py.py test/test_nsp.py test/test_object.py test/test_optdb.py test/test_pc_py.py test/test_snes.py test/test_snes_py.py test/test_sys.py test/test_tao.py test/test_ts.py test/test_ts_py.py test/test_vec.pypetsc4py-3.7.0/petsc4py.egg-info/not-zip-safe0000644000175000001440000000000112711405034021551 0ustar dalcinlusers00000000000000 petsc4py-3.7.0/petsc4py.egg-info/requires.txt0000644000175000001440000000000612711405164021723 0ustar dalcinlusers00000000000000numpy petsc4py-3.7.0/petsc4py.egg-info/dependency_links.txt0000644000175000001440000000000112711405164023375 0ustar dalcinlusers00000000000000 petsc4py-3.7.0/petsc4py.egg-info/PKG-INFO0000644000175000001440000000561512711405164020433 0ustar dalcinlusers00000000000000Metadata-Version: 1.1 Name: petsc4py Version: 3.7.0 Summary: PETSc for Python Home-page: https://bitbucket.org/petsc/petsc4py/ Author: Lisandro Dalcin Author-email: dalcinl@gmail.com License: BSD Download-URL: https://bitbucket.org/petsc/petsc4py/downloads/petsc4py-3.7.0.tar.gz Description: PETSc for Python ================ Python bindings for PETSc. Install ------- If you have a working MPI implementation and the ``mpicc`` compiler wrapper is on your search path, it highly recommended to install ``mpi4py`` first:: $ pip install mpi4py Ensure you have NumPy installed:: $ pip install numpy and finally:: $ pip install petsc petsc4py You can also install the in-development version of petsc4py with:: $ pip install Cython numpy mpi4py $ pip install --no-deps git+https://bitbucket.org/petsc/petsc $ pip install --no-deps git+https://bitbucket.org/petsc/petsc4py or:: $ pip install Cython numpy mpi4py $ pip install --no-deps https://bitbucket.org/petsc/petsc/get/master.tar.gz $ pip install --no-deps https://bitbucket.org/petsc/petsc4py/get/master.tar.gz Citations --------- If PETSc for Python been significant to a project that leads to an academic publication, please acknowledge that fact by citing the project. * L. Dalcin, P. Kler, R. Paz, and A. Cosimo, *Parallel Distributed Computing using Python*, Advances in Water Resources, 34(9):1124-1139, 2011. http://dx.doi.org/10.1016/j.advwatres.2011.04.013 * S. Balay, S. Abhyankar, M.F. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W.D. Gropp, D. Karpeyev, D. Kaushik, M.G. Knepley, L. Curfman McInnes, K. Rupp, B.F. Smith, S. Zampini, H. Zhang, and H. Zhang, *PETSc Users Manual*, ANL-95/11 - Revision 3.7, 2016. http://www.mcs.anl.gov/petsc/petsc-current/docs/manual.pdf Keywords: scientific computing,parallel computing,PETSc,MPI Platform: POSIX Classifier: License :: OSI Approved :: BSD License Classifier: Operating System :: POSIX Classifier: Intended Audience :: Developers Classifier: Intended Audience :: Science/Research Classifier: Programming Language :: C Classifier: Programming Language :: C++ Classifier: Programming Language :: Cython Classifier: Programming Language :: Python Classifier: Programming Language :: Python :: 2 Classifier: Programming Language :: Python :: 3 Classifier: Topic :: Scientific/Engineering Classifier: Topic :: Software Development :: Libraries :: Python Modules Classifier: Development Status :: 5 - Production/Stable Requires: numpy Provides: petsc4py petsc4py-3.7.0/conf/0000755000175000001440000000000012711405164015007 5ustar dalcinlusers00000000000000petsc4py-3.7.0/conf/metadata.py0000644000175000001440000000160612711377604017153 0ustar dalcinlusers00000000000000classifiers = """ License :: OSI Approved :: BSD License Operating System :: POSIX Intended Audience :: Developers Intended Audience :: Science/Research Programming Language :: C Programming Language :: C++ Programming Language :: Cython Programming Language :: Python Programming Language :: Python :: 2 Programming Language :: Python :: 3 Topic :: Scientific/Engineering Topic :: Software Development :: Libraries :: Python Modules """ keywords = """ scientific computing parallel computing """ metadata = { 'author' : 'Lisandro Dalcin', 'author_email' : 'dalcinl@gmail.com', 'classifiers' : [c for c in classifiers.split('\n') if c], 'keywords' : [k for k in keywords.split('\n') if k], 'license' : 'BSD', 'platforms' : ['POSIX'], 'maintainer' : 'Lisandro Dalcin', 'maintainer_email' : 'dalcinl@gmail.com', } petsc4py-3.7.0/conf/baseconf.py0000644000175000001440000006620512711377604017161 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- __all__ = ['PetscConfig', 'setup', 'Extension', 'config', 'build', 'build_src', 'build_ext', 'clean', 'test', 'sdist', 'log', ] # -------------------------------------------------------------------- import sys, os try: import setuptools except ImportError: setuptools = None def import_command(cmd): try: from importlib import import_module except ImportError: import_module = lambda n: __import__(n, fromlist=[None]) try: if not setuptools: raise ImportError mod = import_module('setuptools.command.' + cmd) return getattr(mod, cmd) except ImportError: mod = import_module('distutils.command.' + cmd) return getattr(mod, cmd) if setuptools: from setuptools import setup from setuptools import Extension as _Extension from setuptools import Command else: from distutils.core import setup from distutils.core import Extension as _Extension from distutils.core import Command _config = import_command('config') _build = import_command('build') _build_ext = import_command('build_ext') _install = import_command('install') _clean = import_command('clean') _sdist = import_command('sdist') from distutils import sysconfig from distutils import log from distutils.util import split_quoted, execute from distutils.errors import DistutilsError # -------------------------------------------------------------------- def fix_config_vars(names, values): import os, re values = list(values) if sys.platform == 'darwin': if 'ARCHFLAGS' in os.environ: ARCHFLAGS = os.environ['ARCHFLAGS'] for i, flag in enumerate(list(values)): flag, count = re.subn('-arch\s+\w+', ' ', flag) if count and ARCHFLAGS: flag = flag + ' ' + ARCHFLAGS values[i] = flag if 'SDKROOT' in os.environ: SDKROOT = os.environ['SDKROOT'] for i, flag in enumerate(list(values)): flag, count = re.subn('-isysroot [^ \t]*', ' ', flag) if count and SDKROOT: flag = flag + ' ' + '-isysroot ' + SDKROOT values[i] = flag return values def get_config_vars(*names): # Core Python configuration values = sysconfig.get_config_vars(*names) # Do any distutils flags fixup right now values = fix_config_vars(names, values) return values from distutils.unixccompiler import UnixCCompiler rpath_option_orig = UnixCCompiler.runtime_library_dir_option def rpath_option(compiler, dir): option = rpath_option_orig(compiler, dir) if sys.platform[:5] == 'linux': if option.startswith('-R'): option = option.replace('-R', '-Wl,-rpath,', 1) elif option.startswith('-Wl,-R'): option = option.replace('-Wl,-R', '-Wl,-rpath,', 1) return option UnixCCompiler.runtime_library_dir_option = rpath_option # -------------------------------------------------------------------- class PetscConfig: def __init__(self, petsc_dir, petsc_arch): self.configdict = { } if not petsc_dir: raise DistutilsError("PETSc not found") if not os.path.isdir(petsc_dir): raise DistutilsError("invalid PETSC_DIR: %s" % petsc_dir) self.version = self._get_petsc_version(petsc_dir) self.configdict = self._get_petsc_config(petsc_dir, petsc_arch) self.PETSC_DIR = self['PETSC_DIR'] self.PETSC_ARCH = self['PETSC_ARCH'] language_map = {'CONLY':'c', 'CXXONLY':'c++'} self.language = language_map[self['PETSC_LANGUAGE']] def __getitem__(self, item): return self.configdict[item] def configure(self, extension, compiler=None): self.configure_extension(extension) if compiler is not None: self.configure_compiler(compiler) def _get_petsc_version(self, petsc_dir): import re version_re = { 'major' : re.compile(r"#define\s+PETSC_VERSION_MAJOR\s+(\d+)"), 'minor' : re.compile(r"#define\s+PETSC_VERSION_MINOR\s+(\d+)"), 'micro' : re.compile(r"#define\s+PETSC_VERSION_SUBMINOR\s+(\d+)"), 'patch' : re.compile(r"#define\s+PETSC_VERSION_PATCH\s+(\d+)"), 'release': re.compile(r"#define\s+PETSC_VERSION_RELEASE\s+(\d+)"), } petscversion_h = os.path.join(petsc_dir, 'include', 'petscversion.h') with open(petscversion_h, 'rt') as f: data = f.read() major = int(version_re['major'].search(data).groups()[0]) minor = int(version_re['minor'].search(data).groups()[0]) micro = int(version_re['micro'].search(data).groups()[0]) release = int(version_re['release'].search(data).groups()[0]) return (major, minor, micro), bool(release) def _get_petsc_config(self, petsc_dir, petsc_arch): from os.path import join, isdir, exists PETSC_DIR = petsc_dir PETSC_ARCH = petsc_arch # confdir = join('lib', 'petsc', 'conf') if not (PETSC_ARCH and isdir(join(PETSC_DIR, PETSC_ARCH))): petscvars = join(PETSC_DIR, confdir, 'petscvariables') PETSC_ARCH = makefile(open(petscvars, 'rt')).get('PETSC_ARCH') if not (PETSC_ARCH and isdir(join(PETSC_DIR, PETSC_ARCH))): PETSC_ARCH = '' # variables = join(PETSC_DIR, confdir, 'variables') if not exists(variables): variables = join(PETSC_DIR, PETSC_ARCH, confdir, 'variables') petscvariables = join(PETSC_DIR, PETSC_ARCH, confdir, 'petscvariables') # with open(variables) as f: contents = f.read() with open(petscvariables) as f: contents += f.read() # try: from cStringIO import StringIO except ImportError: from io import StringIO confstr = 'PETSC_DIR = %s\n' % PETSC_DIR confstr += 'PETSC_ARCH = %s\n' % PETSC_ARCH confstr += contents confdict = makefile(StringIO(confstr)) return confdict def _configure_ext(self, ext, dct, preppend=False): extdict = ext.__dict__ for key, values in dct.items(): if key in extdict: for value in values: if value not in extdict[key]: if preppend: extdict[key].insert(0, value) else: extdict[key].append(value) def configure_extension(self, extension): # define macros macros = [('PETSC_DIR', self['PETSC_DIR'])] extension.define_macros.extend(macros) # includes and libraries petsc_inc = flaglist(self['PETSC_CC_INCLUDES']) petsc_lib = flaglist( '-L%s %s' % (self['PETSC_LIB_DIR'], self['PETSC_LIB_BASIC'])) petsc_lib['runtime_library_dirs'].append(self['PETSC_LIB_DIR']) # Link in extra libraries on static builds if self['BUILDSHAREDLIB'] != 'yes': petsc_ext_lib = split_quoted(self['PETSC_EXTERNAL_LIB_BASIC']) petsc_lib['extra_link_args'].extend(petsc_ext_lib) self._configure_ext(extension, petsc_inc, preppend=True) self._configure_ext(extension, petsc_lib) def configure_compiler(self, compiler): if compiler.compiler_type != 'unix': return (cc, cxx, cflags, ccshared, ldflags, ldshared, so_ext) = get_config_vars( 'CC', 'CXX', 'CFLAGS', 'CCSHARED', 'LDFLAGS', 'LDSHARED', 'SO') cflags = cflags or '' ldflags = ldflags or '' cflags = cflags.replace('-Wstrict-prototypes', '') ld = cc ldshared = ldshared.replace(ld, '', 1).strip() ldshared = [flg for flg in split_quoted(ldshared) if flg not in split_quoted(ldflags)] ldshared = str.join(' ', ldshared) # getenv = os.environ.get def get_flags(cmd): try: return ' '.join(split_quoted(cmd)[1:]) except: return '' # C compiler PCC = self['PCC'] PCC_FLAGS = get_flags(cc) + ' ' + self['PCC_FLAGS'] PCC_FLAGS = PCC_FLAGS.replace('-fvisibility=hidden', '') if sys.version_info[:2] < (2, 5): PCC_FLAGS = PCC_FLAGS.replace('-Wwrite-strings', '') PCC = getenv('PCC', PCC) + ' ' + getenv('PCCFLAGS', PCC_FLAGS) ccshared = getenv('CCSHARED', ccshared) cflags = getenv('CFLAGS', cflags) PCC_SHARED = str.join(' ', (PCC, ccshared, cflags)) # C++ compiler if self.language == 'c++': PCXX = PCC else: try: PCXX = self['CXX'] except KeyError: PCXX = cxx # linker PLD = self['PCC_LINKER'] PLD_FLAGS = get_flags(ld) + ' ' + self['PCC_LINKER_FLAGS'] PLD_FLAGS = PLD_FLAGS.replace('-fvisibility=hidden', '') PLD = getenv('PLD', PLD) + ' ' + getenv('PLDFLAGS', PLD_FLAGS) ldshared = getenv('LDSHARED', ldshared) ldflags = getenv('LDFLAGS', cflags + ' ' + ldflags) PLD_SHARED = str.join(' ', (PLD, ldshared, ldflags)) # compiler.set_executables( compiler = PCC, compiler_cxx = PCXX, linker_exe = PLD, compiler_so = PCC_SHARED, linker_so = PLD_SHARED, ) compiler.shared_lib_extension = so_ext # if sys.platform == 'darwin': for attr in ('preprocessor', 'compiler', 'compiler_cxx', 'compiler_so', 'linker_so', 'linker_exe'): compiler_cmd = getattr(compiler, attr, []) while '-mno-fused-madd' in compiler_cmd: compiler_cmd.remove('-mno-fused-madd') def log_info(self): PETSC_DIR = self['PETSC_DIR'] PETSC_ARCH = self['PETSC_ARCH'] version = ".".join([str(i) for i in self.version[0]]) release = ("development", "release")[self.version[1]] version_info = version + ' ' + release integer_size = '%s-bit' % self['PETSC_INDEX_SIZE'] scalar_type = self['PETSC_SCALAR'] precision = self['PETSC_PRECISION'] language = self['PETSC_LANGUAGE'] compiler = self['PCC'] linker = self['PCC_LINKER'] log.info('PETSC_DIR: %s' % PETSC_DIR ) log.info('PETSC_ARCH: %s' % PETSC_ARCH ) log.info('version: %s' % version_info) log.info('integer-size: %s' % integer_size) log.info('scalar-type: %s' % scalar_type) log.info('precision: %s' % precision) log.info('language: %s' % language) log.info('compiler: %s' % compiler) log.info('linker: %s' % linker) # -------------------------------------------------------------------- class Extension(_Extension): pass # -------------------------------------------------------------------- cmd_petsc_opts = [ ('petsc-dir=', None, "define PETSC_DIR, overriding environmental variables"), ('petsc-arch=', None, "define PETSC_ARCH, overriding environmental variables"), ] class config(_config): Configure = PetscConfig user_options = _config.user_options + cmd_petsc_opts def initialize_options(self): _config.initialize_options(self) self.petsc_dir = None self.petsc_arch = None def get_config_arch(self, arch): return config.Configure(self.petsc_dir, arch) def run(self): _config.run(self) self.petsc_dir = config.get_petsc_dir(self.petsc_dir) if self.petsc_dir is None: return petsc_arch = config.get_petsc_arch(self.petsc_dir, self.petsc_arch) log.info('-' * 70) log.info('PETSC_DIR: %s' % self.petsc_dir) arch_list = petsc_arch if not arch_list : arch_list = [ None ] for arch in arch_list: conf = self.get_config_arch(arch) archname = conf.PETSC_ARCH or conf['PETSC_ARCH'] scalar_type = conf['PETSC_SCALAR'] precision = conf['PETSC_PRECISION'] language = conf['PETSC_LANGUAGE'] compiler = conf['PCC'] linker = conf['PCC_LINKER'] log.info('-'*70) log.info('PETSC_ARCH: %s' % archname) log.info(' * scalar-type: %s' % scalar_type) log.info(' * precision: %s' % precision) log.info(' * language: %s' % language) log.info(' * compiler: %s' % compiler) log.info(' * linker: %s' % linker) log.info('-' * 70) #@staticmethod def get_petsc_dir(petsc_dir): if not petsc_dir: return None petsc_dir = os.path.expandvars(petsc_dir) if not petsc_dir or '$PETSC_DIR' in petsc_dir: try: import petsc petsc_dir = petsc.get_petsc_dir() except ImportError: log.warn("PETSC_DIR not specified") return None petsc_dir = os.path.expanduser(petsc_dir) petsc_dir = os.path.abspath(petsc_dir) return config.chk_petsc_dir(petsc_dir) get_petsc_dir = staticmethod(get_petsc_dir) #@staticmethod def chk_petsc_dir(petsc_dir): if not os.path.isdir(petsc_dir): log.error('invalid PETSC_DIR: %s (ignored)' % petsc_dir) return None return petsc_dir chk_petsc_dir = staticmethod(chk_petsc_dir) #@staticmethod def get_petsc_arch(petsc_dir, petsc_arch): if not petsc_dir: return None petsc_arch = os.path.expandvars(petsc_arch) if (not petsc_arch or '$PETSC_ARCH' in petsc_arch): petsc_arch = '' petsc_conf = os.path.join(petsc_dir, 'lib', 'petsc', 'conf') if os.path.isdir(petsc_conf): petscvariables = os.path.join(petsc_conf, 'petscvariables') if os.path.exists(petscvariables): conf = makefile(open(petscvariables, 'rt')) petsc_arch = conf.get('PETSC_ARCH', '') petsc_arch = petsc_arch.split(os.pathsep) petsc_arch = unique(petsc_arch) petsc_arch = [arch for arch in petsc_arch if arch] return config.chk_petsc_arch(petsc_dir, petsc_arch) get_petsc_arch = staticmethod(get_petsc_arch) #@staticmethod def chk_petsc_arch(petsc_dir, petsc_arch): valid_archs = [] for arch in petsc_arch: arch_path = os.path.join(petsc_dir, arch) if os.path.isdir(arch_path): valid_archs.append(arch) else: log.warn("invalid PETSC_ARCH: %s (ignored)" % arch) return valid_archs chk_petsc_arch = staticmethod(chk_petsc_arch) class build(_build): user_options = _build.user_options + cmd_petsc_opts def initialize_options(self): _build.initialize_options(self) self.petsc_dir = None self.petsc_arch = None def finalize_options(self): _build.finalize_options(self) self.set_undefined_options('config', ('petsc_dir', 'petsc_dir'), ('petsc_arch', 'petsc_arch')) self.petsc_dir = config.get_petsc_dir(self.petsc_dir) self.petsc_arch = config.get_petsc_arch(self.petsc_dir, self.petsc_arch) sub_commands = \ [('build_src', lambda *args: True)] + \ _build.sub_commands class build_src(Command): description = "build C sources from Cython files" user_options = [ ('force', 'f', "forcibly build everything (ignore file timestamps)"), ] boolean_options = ['force'] def initialize_options(self): self.force = False def finalize_options(self): self.set_undefined_options('build', ('force', 'force'), ) def run(self): pass class build_ext(_build_ext): user_options = _build_ext.user_options + cmd_petsc_opts def initialize_options(self): _build_ext.initialize_options(self) self.petsc_dir = None self.petsc_arch = None self._outputs = [] def finalize_options(self): _build_ext.finalize_options(self) self.set_undefined_options('build', ('petsc_dir', 'petsc_dir'), ('petsc_arch', 'petsc_arch')) if ((sys.platform.startswith('linux') or sys.platform.startswith('gnu') or sys.platform.startswith('sunos')) and sysconfig.get_config_var('Py_ENABLE_SHARED')): py_version = sysconfig.get_python_version() bad_pylib_dir = os.path.join(sys.prefix, "lib", "python" + py_version, "config") try: self.library_dirs.remove(bad_pylib_dir) except ValueError: pass pylib_dir = sysconfig.get_config_var("LIBDIR") if pylib_dir not in self.library_dirs: self.library_dirs.append(pylib_dir) if pylib_dir not in self.rpath: self.rpath.append(pylib_dir) if sys.exec_prefix == '/usr': self.library_dirs.remove(pylib_dir) self.rpath.remove(pylib_dir) def _copy_ext(self, ext): from copy import deepcopy extclass = ext.__class__ fullname = self.get_ext_fullname(ext.name) modpath = str.split(fullname, '.') pkgpath = os.path.join('', *modpath[0:-1]) name = modpath[-1] sources = list(ext.sources) newext = extclass(name, sources) newext.__dict__.update(deepcopy(ext.__dict__)) newext.name = name return pkgpath, newext def _build_ext_arch(self, ext, pkgpath, arch): build_temp = self.build_temp build_lib = self.build_lib try: self.build_temp = os.path.join(build_temp, arch) self.build_lib = os.path.join(build_lib, pkgpath, arch) _build_ext.build_extension(self, ext) finally: self.build_temp = build_temp self.build_lib = build_lib def get_config_arch(self, arch): return config.Configure(self.petsc_dir, arch) def build_extension(self, ext): if not isinstance(ext, Extension): return _build_ext.build_extension(self, ext) petsc_arch = self.petsc_arch if not petsc_arch: petsc_arch = [ None ] for arch in petsc_arch: config = self.get_config_arch(arch) ARCH = arch or config['PETSC_ARCH'] if ARCH not in self.PETSC_ARCH_LIST: self.PETSC_ARCH_LIST.append(ARCH) ext.language = config.language config.log_info() pkgpath, newext = self._copy_ext(ext) config.configure(newext, self.compiler) name = self.distribution.get_name() version = self.distribution.get_version() distdir = "%s-%s/" % (name, version) self._build_ext_arch(newext, pkgpath, ARCH) def build_extensions(self, *args, **kargs): self.PETSC_ARCH_LIST = [] _build_ext.build_extensions(self, *args,**kargs) if not self.PETSC_ARCH_LIST: return self.build_configuration(self.PETSC_ARCH_LIST) def build_configuration(self, arch_list): # template, variables = self.get_config_data(arch_list) config_data = template % variables # build_lib = self.build_lib dist_name = self.distribution.get_name() config_file = os.path.join(build_lib, dist_name, 'lib', dist_name.replace('4py', '') + '.cfg') # def write_file(filename, data): with open(filename, 'w') as fh: fh.write(config_data) execute(write_file, (config_file, config_data), msg='writing %s' % config_file, verbose=self.verbose, dry_run=self.dry_run) def get_config_data(self, arch_list): template = """\ PETSC_DIR = %(PETSC_DIR)s PETSC_ARCH = %(PETSC_ARCH)s """ variables = {'PETSC_DIR' : self.petsc_dir, 'PETSC_ARCH' : os.path.pathsep.join(arch_list)} return template, variables def get_outputs(self): self.check_extensions_list(self.extensions) outputs = [] for ext in self.extensions: fullname = self.get_ext_fullname(ext.name) filename = self.get_ext_filename(fullname) if isinstance(ext, Extension): head, tail = os.path.split(filename) for arch in self.petsc_arch: outfile = os.path.join(self.build_lib, head, arch, tail) outputs.append(outfile) else: outfile = os.path.join(self.build_lib, filename) outputs.append(outfile) outputs = list(set(outputs)) return outputs class install(_install): def run(self): _install.run(self) class clean(_clean): def run(self): _clean.run(self) from distutils.dir_util import remove_tree if self.all: # remove the .egg_info directory try: egg_info = self.get_finalized_command('egg_info').egg_info if os.path.exists(egg_info): remove_tree(egg_info, dry_run=self.dry_run) else: log.debug("'%s' does not exist -- can't clean it", egg_info) except DistutilsError: pass class test(Command): description = "run the test suite" user_options = [('args=', None, "options")] def initialize_options(self): self.args = None def finalize_options(self): if self.args: self.args = split_quoted(self.args) else: self.args = [] def run(self): pass class sdist(_sdist): def run(self): build_src = self.get_finalized_command('build_src') build_src.run() _sdist.run(self) # -------------------------------------------------------------------- def append(seq, item): if item not in seq: seq.append(item) def append_dict(conf, dct): for key, values in dct.items(): if key in conf: for value in values: if value not in conf[key]: conf[key].append(value) def unique(seq): res = [] for item in seq: if item not in res: res.append(item) return res def flaglist(flags): conf = { 'define_macros' : [], 'undef_macros' : [], 'include_dirs' : [], 'libraries' : [], 'library_dirs' : [], 'runtime_library_dirs': [], 'extra_compile_args' : [], 'extra_link_args' : [], } if type(flags) is str: flags = flags.split() switch = '-Wl,' newflags = [] linkopts = [] for f in flags: if f.startswith(switch): if len(f) > 4: append(linkopts, f[4:]) else: append(newflags, f) if linkopts: newflags.append(switch + ','.join(linkopts)) flags = newflags append_next_word = None for word in flags: if append_next_word is not None: append(append_next_word, word) append_next_word = None continue switch, value = word[0:2], word[2:] if switch == "-I": append(conf['include_dirs'], value) elif switch == "-D": try: idx = value.index("=") macro = (value[:idx], value[idx+1:]) except ValueError: macro = (value, None) append(conf['define_macros'], macro) elif switch == "-U": append(conf['undef_macros'], value) elif switch == "-l": append(conf['libraries'], value) elif switch == "-L": append(conf['library_dirs'], value) elif switch == "-R": append(conf['runtime_library_dirs'], value) elif word.startswith("-Wl"): linkopts = word.split(',') append_dict(conf, flaglist(linkopts[1:])) elif word == "-rpath": append_next_word = conf['runtime_library_dirs'] elif word == "-Xlinker": append_next_word = conf['extra_link_args'] else: #log.warn("unrecognized flag '%s'" % word) pass return conf # -------------------------------------------------------------------- from distutils.text_file import TextFile # Regexes needed for parsing Makefile-like syntaxes import re as _re _variable_rx = _re.compile("([a-zA-Z][a-zA-Z0-9_]+)\s*=\s*(.*)") _findvar1_rx = _re.compile(r"\$\(([A-Za-z][A-Za-z0-9_]*)\)") _findvar2_rx = _re.compile(r"\${([A-Za-z][A-Za-z0-9_]*)}") def makefile(fileobj, dct=None): """Parse a Makefile-style file. A dictionary containing name/value pairs is returned. If an optional dictionary is passed in as the second argument, it is used instead of a new dictionary. """ fp = TextFile(file=fileobj, strip_comments=1, skip_blanks=1, join_lines=1) if dct is None: dct = {} done = {} notdone = {} while 1: line = fp.readline() if line is None: # eof break m = _variable_rx.match(line) if m: n, v = m.group(1, 2) v = str.strip(v) if "$" in v: notdone[n] = v else: try: v = int(v) except ValueError: pass done[n] = v try: del notdone[n] except KeyError: pass fp.close() # do variable interpolation here while notdone: for name in list(notdone.keys()): value = notdone[name] m = _findvar1_rx.search(value) or _findvar2_rx.search(value) if m: n = m.group(1) found = True if n in done: item = str(done[n]) elif n in notdone: # get it on a subsequent round found = False else: done[n] = item = "" if found: after = value[m.end():] value = value[:m.start()] + item + after if "$" in after: notdone[name] = value else: try: value = int(value) except ValueError: done[name] = str.strip(value) else: done[name] = value del notdone[name] else: # bogus variable reference; # just drop it since we can't deal del notdone[name] # save the results in the global dictionary dct.update(done) return dct # -------------------------------------------------------------------- petsc4py-3.7.0/conf/petscconf.py0000644000175000001440000000113312711377604017352 0ustar dalcinlusers00000000000000# -------------------------------------------------------------------- __all__ = ['setup', 'Extension', 'config', 'build', 'build_src', 'build_ext', 'install', 'clean', 'test', 'sdist', ] # -------------------------------------------------------------------- from conf.baseconf import setup, Extension from conf.baseconf import config, build, build_src, build_ext, install from conf.baseconf import clean, test, sdist # -------------------------------------------------------------------- petsc4py-3.7.0/conf/epydocify.py0000755000175000001440000000550512711377604017373 0ustar dalcinlusers00000000000000#!/usr/bin/env python # -------------------------------------------------------------------- from petsc4py import PETSc # -------------------------------------------------------------------- try: from docutils.nodes import NodeVisitor NodeVisitor.unknown_visit = lambda self, node: None NodeVisitor.unknown_departure = lambda self, node: None except ImportError: pass try: # epydoc 3.0.1 + docutils 0.6 from docutils.nodes import Text from UserString import UserString if not isinstance(Text, UserString): def Text_get_data(s): try: return s._data except AttributeError: return s.astext() def Text_set_data(s, d): s.astext = lambda: d s._data = d Text.data = property(Text_get_data, Text_set_data) except ImportError: pass # -------------------------------------------------------------------- from epydoc.docwriter import dotgraph import re dotgraph._DOT_VERSION_RE = \ re.compile(r'dot (?:- Graphviz )version ([\d\.]+)') try: dotgraph.DotGraph.DEFAULT_HTML_IMAGE_FORMAT dotgraph.DotGraph.DEFAULT_HTML_IMAGE_FORMAT = 'png' except AttributeError: DotGraph_to_html = dotgraph.DotGraph.to_html DotGraph_run_dot = dotgraph.DotGraph._run_dot def to_html(self, image_file, image_url, center=True): if image_file[-4:] == '.gif': image_file = image_file[:-4] + '.png' if image_url[-4:] == '.gif': image_url = image_url[:-4] + '.png' return DotGraph_to_html(self, image_file, image_url) def _run_dot(self, *options): if '-Tgif' in options: opts = list(options) for i, o in enumerate(opts): if o == '-Tgif': opts[i] = '-Tpng' options = type(options)(opts) return DotGraph_run_dot(self, *options) dotgraph.DotGraph.to_html = to_html dotgraph.DotGraph._run_dot = _run_dot # -------------------------------------------------------------------- import re _SIGNATURE_RE = re.compile( # Class name (for builtin methods) r'^\s*((?P\w+)\.)?' + # The function name r'(?P\w+)' + # The parameters r'\(((?P(?:self|cls|mcs)),?)?(?P.*)\)' + # The return value (optional) r'(\s*(->)\s*(?P\S.*?))?'+ # The end marker r'\s*(\n|\s+(--|<=+>)\s+|$|\.\s+|\.\n)') from epydoc import docstringparser as dsp dsp._SIGNATURE_RE = _SIGNATURE_RE # -------------------------------------------------------------------- import sys, os import epydoc.cli def epydocify(): dirname = os.path.dirname(__file__) config = os.path.join(dirname, 'epydoc.cfg') sys.argv.append('--config=' + config) epydoc.cli.cli() if __name__ == '__main__': epydocify() # -------------------------------------------------------------------- petsc4py-3.7.0/conf/cythonize.py0000755000175000001440000000423412711377604017412 0ustar dalcinlusers00000000000000#!/usr/bin/env python import sys, os def cythonize(source, includes=(), destdir_c=None, destdir_h=None, wdir=None): from Cython.Compiler.Main import \ CompilationOptions, default_options, \ compile, \ PyrexError from Cython.Compiler import Options cwd = os.getcwd() try: name, ext = os.path.splitext(source) outputs_c = [name+'.c'] outputs_h = [name+'.h', name+'_api.h'] # change working directory if wdir: os.chdir(wdir) # run Cython on source options = CompilationOptions(default_options) options.output_file = outputs_c[0] options.include_path = list(includes) Options.generate_cleanup_code = 3 any_failures = 0 try: result = compile(source, options) if result.num_errors > 0: any_failures = 1 except (EnvironmentError, PyrexError): e = sys.exc_info()[1] sys.stderr.write(str(e) + '\n') any_failures = 1 if any_failures: for output in outputs_c + outputs_h: try: os.remove(output) except OSError: pass return 1 # move ouputs for destdir, outputs in ( (destdir_c, outputs_c), (destdir_h, outputs_h)): if destdir is None: continue for output in outputs: dest = os.path.join( destdir, os.path.basename(output)) try: os.remove(dest) except OSError: pass os.rename(output, dest) # return 0 # finally: os.chdir(cwd) if __name__ == "__main__": sys.exit( cythonize('petsc4py.PETSc.pyx', includes=['include'], destdir_h=os.path.join('include', 'petsc4py'), wdir='src') or cythonize(os.path.join('libpetsc4py', 'libpetsc4py.pyx'), includes=['include'], wdir='src') ) petsc4py-3.7.0/conf/epydoc.cfg0000644000175000001440000001055712711377604016772 0ustar dalcinlusers00000000000000[epydoc] # Epydoc section marker (required by ConfigParser) # The list of objects to document. Objects can be named using # dotted names, module filenames, or package directory names. # Alases for this option include "objects" and "values". modules: petsc4py # The type of output that should be generated. Should be one # of: html, text, latex, dvi, ps, pdf. #output: html # The path to the output directory. May be relative or absolute. #target: docs/html/ # An integer indicating how verbose epydoc should be. The default # value is 0; negative values will supress warnings and errors; # positive values will give more verbose output. verbosity: 0 # A boolean value indicating that Epydoc should show a tracaback # in case of unexpected error. By default don't show tracebacks #debug: 0 # If True, don't try to use colors or cursor control when doing # textual output. The default False assumes a rich text prompt #simple-term: 0 ### Generation options # The default markup language for docstrings, for modules that do # not define __docformat__. Defaults to epytext. docformat: reStructuredText # Whether or not parsing should be used to examine objects. parse: yes # Whether or not introspection should be used to examine objects. introspect: yes # Don't examine in any way the modules whose dotted name match this # regular expression pattern. exclude: petsc4py.__main__ # Don't perform introspection on the modules whose dotted name match this # regular expression pattern. #exclude-introspect # Don't perform parsing on the modules whose dotted name match this # regular expression pattern. #exclude-parse: # The format for showing inheritance objects. # It should be one of: 'grouped', 'listed', 'included'. inheritance: listed # Whether or not to inclue private variables. (Even if included, # private variables will be hidden by default.) private: yes # Whether or not to list each module's imports. imports: no # Whether or not to include syntax highlighted source code in # the output (HTML only). sourcecode: no # Whether or not to include a a page with Epydoc log, containing # effective option at the time of generation and the reported logs. include-log: no ### Output options # The documented project's name. name: PETSc for Python # The documented project's URL. url: https://bitbucket.org/petsc/petsc4py # The CSS stylesheet for HTML output. Can be the name of a builtin # stylesheet, or the name of a file. css: white # HTML code for the project link in the navigation bar. If left # unspecified, the project link will be generated based on the # project's name and URL. #link: My Cool Project # The "top" page for the documentation. Can be a URL, the name # of a module or class, or one of the special names "trees.html", # "indices.html", or "help.html" #top: os.path # An alternative help file. The named file should contain the # body of an HTML file; navigation bars will be added to it. #help: my_helpfile.html # Whether or not to include a frames-based table of contents. frames: yes # Whether each class should be listed in its own section when # generating LaTeX or PDF output. separate-classes: no ### API linking options # Define a new API document. A new interpreted text role # will be created #external-api: epydoc # Use the records in this file to resolve objects in the API named NAME. #external-api-file: epydoc:api-objects.txt # Use this URL prefix to configure the string returned for external API. #external-api-root: epydoc:http://epydoc.sourceforge.net/api ### Graph options # The list of graph types that should be automatically included # in the output. Graphs are generated using the Graphviz "dot" # executable. Graph types include: "classtree", "callgraph", # "umlclasstree". Use "all" to include all graph types graph: classtree # The path to the Graphviz "dot" executable, used to generate # graphs. #dotpath: /usr/local/bin/dot # The name of one or more pstat files (generated by the profile # or hotshot module). These are used to generate call graphs. #pstat: profile.out # Specify the font used to generate Graphviz graphs. # (e.g., helvetica or times). graph-font: Helvetica # Specify the font size used to generate Graphviz graphs. graph-font-size: 10 ### Return value options # The condition upon which Epydoc should exit with a non-zero # exit status. Possible values are error, warning, docstring_warning #fail-on: error petsc4py-3.7.0/conf/__init__.py0000644000175000001440000000000012711377604017115 0ustar dalcinlusers00000000000000petsc4py-3.7.0/DESCRIPTION.rst0000644000175000001440000000275112711377604016413 0ustar dalcinlusers00000000000000PETSc for Python ================ Python bindings for PETSc. Install ------- If you have a working MPI implementation and the ``mpicc`` compiler wrapper is on your search path, it highly recommended to install ``mpi4py`` first:: $ pip install mpi4py Ensure you have NumPy installed:: $ pip install numpy and finally:: $ pip install petsc petsc4py You can also install the in-development version of petsc4py with:: $ pip install Cython numpy mpi4py $ pip install --no-deps git+https://bitbucket.org/petsc/petsc $ pip install --no-deps git+https://bitbucket.org/petsc/petsc4py or:: $ pip install Cython numpy mpi4py $ pip install --no-deps https://bitbucket.org/petsc/petsc/get/master.tar.gz $ pip install --no-deps https://bitbucket.org/petsc/petsc4py/get/master.tar.gz Citations --------- If PETSc for Python been significant to a project that leads to an academic publication, please acknowledge that fact by citing the project. * L. Dalcin, P. Kler, R. Paz, and A. Cosimo, *Parallel Distributed Computing using Python*, Advances in Water Resources, 34(9):1124-1139, 2011. http://dx.doi.org/10.1016/j.advwatres.2011.04.013 * S. Balay, S. Abhyankar, M.F. Adams, J. Brown, P. Brune, K. Buschelman, L. Dalcin, V. Eijkhout, W.D. Gropp, D. Karpeyev, D. Kaushik, M.G. Knepley, L. Curfman McInnes, K. Rupp, B.F. Smith, S. Zampini, H. Zhang, and H. Zhang, *PETSc Users Manual*, ANL-95/11 - Revision 3.7, 2016. http://www.mcs.anl.gov/petsc/petsc-current/docs/manual.pdf petsc4py-3.7.0/demo/0000755000175000001440000000000012711405164015006 5ustar dalcinlusers00000000000000petsc4py-3.7.0/demo/wrap-f2py/0000755000175000001440000000000012711405164016635 5ustar dalcinlusers00000000000000petsc4py-3.7.0/demo/wrap-f2py/run_demo.py0000644000175000001440000000432312711377604021030 0ustar dalcinlusers00000000000000import sys, petsc4py petsc4py.init(sys.argv) from petsc4py import PETSc import Bratu2D as Bratu2D class App(object): def __init__(self, da, lambda_): assert da.getDim() == 2 self.da = da self.lambda_ = lambda_ def formInitGuess(self, snes, X): X.zeroEntries() # just in case da = self.da.fortran vec_X = X.fortran ierr = Bratu2D.FormInitGuess(da, vec_X, self.lambda_) if ierr: raise PETSc.Error(ierr) def formFunction(self, snes, X, F): F.zeroEntries() # just in case da = self.da.fortran vec_X = X.fortran vec_F = F.fortran ierr = Bratu2D.FormFunction(da, vec_X, vec_F, self.lambda_) if ierr: raise PETSc.Error(ierr) def formJacobian(self, snes, X, J, P): P.zeroEntries() # just in case da = self.da.fortran vec_X = X.fortran mat_P = P.fortran ierr = Bratu2D.FormJacobian(da, vec_X, mat_P, self.lambda_) if ierr: raise PETSc.Error(ierr) if J != P: J.assemble() # matrix-free operator return PETSc.Mat.Structure.SAME_NONZERO_PATTERN OptDB = PETSc.Options() N = OptDB.getInt('N', 16) lambda_ = OptDB.getReal('lambda', 6.0) do_plot = OptDB.getBool('plot', False) da = PETSc.DA().create([N, N], stencil_width=1) app = App(da, lambda_) snes = PETSc.SNES().create() F = da.createGlobalVec() snes.setFunction(app.formFunction, F) J = da.createMat() snes.setJacobian(app.formJacobian, J) snes.setFromOptions() X = da.createGlobalVec() app.formInitGuess(snes, X) snes.solve(None, X) U = da.createNaturalVec() da.globalToNatural(X, U) def plot(da, U): comm = da.getComm() scatter, U0 = PETSc.Scatter.toZero(U) scatter.scatter(U, U0, False, PETSc.Scatter.Mode.FORWARD) rank = comm.getRank() if rank == 0: solution = U0[...] solution = solution.reshape(da.sizes, order='f').copy() try: from matplotlib import pyplot pyplot.contourf(solution) pyplot.axis('equal') pyplot.show() except: pass comm.barrier() scatter.destroy() U0.destroy() if do_plot: plot(da, U) U.destroy() X.destroy() F.destroy() J.destroy() da.destroy() snes.destroy() petsc4py-3.7.0/demo/wrap-f2py/setup.py0000644000175000001440000000404212711377604020356 0ustar dalcinlusers00000000000000#!/usr/bin/env python #$ python setup.py build_ext --inplace # a bit of monkeypatching ... try: from numpy.distutils.fcompiler import FCompiler def runtime_library_dir_option(self, dir): return self.c_compiler.runtime_library_dir_option(dir) FCompiler.runtime_library_dir_option = \ runtime_library_dir_option except Exception: pass def configuration(parent_package='',top_path=None): INCLUDE_DIRS = [] LIBRARY_DIRS = [] LIBRARIES = [] # PETSc import os PETSC_DIR = os.environ['PETSC_DIR'] PETSC_ARCH = os.environ.get('PETSC_ARCH', '') from os.path import join, isdir if PETSC_ARCH and isdir(join(PETSC_DIR, PETSC_ARCH)): INCLUDE_DIRS += [join(PETSC_DIR, PETSC_ARCH, 'include'), join(PETSC_DIR, 'include')] LIBRARY_DIRS += [join(PETSC_DIR, PETSC_ARCH, 'lib')] else: if PETSC_ARCH: pass # XXX should warn ... INCLUDE_DIRS += [join(PETSC_DIR, 'include')] LIBRARY_DIRS += [join(PETSC_DIR, 'lib')] LIBRARIES += [#'petscts', 'petscsnes', 'petscksp', #'petscdm', 'petscmat', 'petscvec', 'petsc'] # PETSc for Python import petsc4py INCLUDE_DIRS += [petsc4py.get_include()] # Configuration from numpy.distutils.misc_util import Configuration config = Configuration('', parent_package, top_path) config.add_extension('Bratu2D', sources = ['Bratu2D.pyf', 'Bratu2D.F90'], depends = ['Bratu2Dmodule.h'], f2py_options=['--quiet'], define_macros=[('F2PY_REPORT_ON_ARRAY_COPY',1)], include_dirs=INCLUDE_DIRS + [os.curdir], libraries=LIBRARIES, library_dirs=LIBRARY_DIRS, runtime_library_dirs=LIBRARY_DIRS) return config if __name__ == "__main__": from numpy.distutils.core import setup setup(**configuration(top_path='').todict()) petsc4py-3.7.0/demo/wrap-f2py/makefile0000644000175000001440000000102012711377604020335 0ustar dalcinlusers00000000000000# -*- makefile -*- MPIEXEC= PYTHON=python .PHONY:test test: run clean SCRIPT=run_demo MODULE=Bratu2D .PHONY:build build: ${MODULE}.so .PHONY:run run: build ${PYTHON} ${SCRIPT}.py ${MODULE}.so: ${MODULE}.pyf ${MODULE}.F90 CC=${CC} F90=${FC} LDSHARED=${FC_LINKER} \ ${PYTHON} setup.py -q build_ext --inplace ${RM} -r build ${MODULE}module.c .PHONY:clean clean:: ${RM} ${MODULE}*.so ${RM} *.py[co] ${RM} -r __pycache__ include ${PETSC_DIR}/lib/petsc/conf/variables include ${PETSC_DIR}/lib/petsc/conf/rules MPIEXEC= petsc4py-3.7.0/demo/wrap-f2py/Bratu2Dmodule.h0000644000175000001440000000072512711377604021472 0ustar dalcinlusers00000000000000#define FormInitGuess forminitguess #define FormFunction formfunction #define FormJacobian formjacobian #define FormInitGuess_ forminitguess_ #define FormFunction_ formfunction_ #define FormJacobian_ formjacobian_ #define _FormInitGuess _forminitguess #define _FormFunction _formfunction #define _FormJacobian _formjacobian #define _FormInitGuess_ _forminitguess_ #define _FormFunction_ _formfunction_ #define _FormJacobian_ _formjacobian_ petsc4py-3.7.0/demo/wrap-f2py/Bratu2D.F900000644000175000001440000001736412711377604020402 0ustar dalcinlusers00000000000000! --------------------------------------------------------------------- ! ! Solid Fuel Ignition (SFI) problem. This problem is modeled by ! the partial differential equation ! ! -Laplacian(u) - lambda * exp(u) = 0, 0 < x,y < 1, ! ! with boundary conditions ! ! u = 0 for x = 0, x = 1, y = 0, y = 1, ! ! A finite difference approximation with the usual 5-point stencil ! is used to discretize the boundary value problem to obtain a ! nonlinear system of equations. The problem is solved in a 2D ! rectangular domain, using distributed arrays (DAs) to partition ! the parallel grid. ! ! -------------------------------------------------------------------- #include "petsc/finclude/petscdef.h" #include "petscversion.h" #undef CHKERRQ #define CHKERRQ(n) if ((n) .ne. 0) return; ! -------------------------------------------------------------------- module Bratu2D use petsc type gridinfo PetscInt mx,xs,xe,xm,gxs,gxe,gxm PetscInt my,ys,ye,ym,gys,gye,gym end type gridinfo contains subroutine GetGridInfo(da, grd, ierr) implicit none DM da type(gridinfo) grd PetscErrorCode ierr ! call DMDAGetInfo(da, PETSC_NULL_INTEGER, & & grd%mx, grd%my, PETSC_NULL_INTEGER, & & PETSC_NULL_INTEGER,PETSC_NULL_INTEGER,PETSC_NULL_INTEGER, & & PETSC_NULL_INTEGER,PETSC_NULL_INTEGER, & & PETSC_NULL_INTEGER,PETSC_NULL_INTEGER,PETSC_NULL_INTEGER, & & PETSC_NULL_INTEGER,ierr); CHKERRQ(ierr) call DMDAGetCorners(da, & & grd%xs,grd%ys,PETSC_NULL_INTEGER, & & grd%xm,grd%ym,PETSC_NULL_INTEGER,ierr); CHKERRQ(ierr) call DMDAGetGhostCorners(da, & & grd%gxs,grd%gys,PETSC_NULL_INTEGER, & & grd%gxm,grd%gym,PETSC_NULL_INTEGER,ierr); CHKERRQ(ierr) ! grd%xs = grd%xs+1 grd%ys = grd%ys+1 grd%gxs = grd%gxs+1 grd%gys = grd%gys+1 grd%ye = grd%ys+grd%ym-1 grd%xe = grd%xs+grd%xm-1 grd%gye = grd%gys+grd%gym-1 grd%gxe = grd%gxs+grd%gxm-1 end subroutine GetGridInfo subroutine InitGuessLocal(grd, x, lambda, ierr) implicit none type(gridinfo) grd PetscScalar x(grd%xs:grd%xe,grd%ys:grd%ye) PetscReal lambda PetscErrorCode ierr ! PetscInt i, j PetscReal hx,hy,temp,temp1,one one = 1.0 hx = one/(dble(grd%mx-1)) hy = one/(dble(grd%my-1)) temp1 = lambda/(lambda+one) do j=grd%ys,grd%ye temp = dble(min(j-1,grd%my-j))*hy do i=grd%xs,grd%xe if (i==1 .or. j==1 .or. i==grd%mx .or. j==grd%my) then ! boundary points x(i,j) = 0.0 else ! interior grid points x(i,j) = temp1*sqrt(min(dble(min(i-1,grd%mx-i)*hx),dble(temp))) end if end do end do ierr = 0 end subroutine InitGuessLocal subroutine FunctionLocal(grd, x, f, lambda, ierr) implicit none type(gridinfo) grd PetscScalar x(grd%gxs:grd%gxe,grd%gys:grd%gye) PetscScalar f(grd%xs:grd%xe,grd%ys:grd%ye) PetscReal lambda PetscErrorCode ierr ! PetscInt i,j PetscReal hx,hy,hxdhy,hydhx,sc,one,two PetscScalar u,uxx,uyy one = 1.0 two = 2.0 hx = one/dble(grd%mx-1) hy = one/dble(grd%my-1) sc = hx*hy hxdhy = hx/hy hydhx = hy/hx do j=grd%ys,grd%ye do i=grd%xs,grd%xe if (i==1 .or. j==1 .or. i==grd%mx .or. j==grd%my) then ! boundary points f(i,j) = x(i,j) - 0.0 else ! interior grid points u = x(i,j) uxx = (two*u - x(i-1,j) - x(i+1,j)) * hydhx uyy = (two*u - x(i,j-1) - x(i,j+1)) * hxdhy f(i,j) = uxx + uyy - lambda*exp(u)*sc end if end do end do ierr = 0 end subroutine FunctionLocal subroutine JacobianLocal(grd, x, Jac, lambda, ierr) implicit none type(gridinfo) grd PetscScalar x(grd%gxs:grd%gxe,grd%gys:grd%gye) Mat Jac PetscReal lambda PetscErrorCode ierr ! PetscInt i,j,row(1),col(5) PetscInt ione,ifive PetscReal hx,hy,hxdhy,hydhx,sc,v(5),one,two ione = 1 ifive = 5 one = 1.0 two = 2.0 hx = one/dble(grd%mx-1) hy = one/dble(grd%my-1) sc = hx*hy hxdhy = hx/hy hydhx = hy/hx do j=grd%ys,grd%ye row = (j - grd%gys)*grd%gxm + grd%xs - grd%gxs - 1 do i=grd%xs,grd%xe row = row + 1 if (i==1 .or. j==1 .or. i==grd%mx .or. j==grd%my) then ! boundary points col(1) = row(1) v(1) = one call MatSetValuesLocal(Jac,ione,row,ione,col,v,INSERT_VALUES,ierr); CHKERRQ(ierr) else ! interior grid points v(1) = -hxdhy v(2) = -hydhx v(3) = two*(hydhx + hxdhy) - lambda*exp(x(i,j))*sc v(4) = -hydhx v(5) = -hxdhy col(1) = row(1) - grd%gxm col(2) = row(1) - 1 col(3) = row(1) col(4) = row(1) + 1 col(5) = row(1) + grd%gxm call MatSetValuesLocal(Jac,ione,row,ifive,col,v,INSERT_VALUES,ierr); CHKERRQ(ierr) end if end do end do end subroutine JacobianLocal end module Bratu2D ! -------------------------------------------------------------------- subroutine FormInitGuess(da, X, lambda, ierr) use Bratu2D implicit none DM da Vec X PetscReal lambda PetscErrorCode ierr ! type(gridinfo) :: grd PetscScalar,pointer :: xx(:) call VecGetArrayF90(X,xx,ierr); CHKERRQ(ierr) call GetGridInfo(da,grd,ierr); CHKERRQ(ierr) call InitGuessLocal(grd,xx,lambda,ierr); CHKERRQ(ierr) call VecRestoreArrayF90(X,xx,ierr); CHKERRQ(ierr) end subroutine FormInitGuess subroutine FormFunction(da, X, F, lambda, ierr) use Bratu2D implicit none DM da Vec X Vec F PetscReal lambda PetscErrorCode ierr ! type(gridinfo) :: grd Vec :: localX PetscScalar,pointer :: xx(:) PetscScalar,pointer :: ff(:) call DMGetLocalVector(da,localX,ierr); CHKERRQ(ierr) call DMGlobalToLocalBegin(da,X,INSERT_VALUES,localX,ierr); CHKERRQ(ierr) call DMGlobalToLocalEnd(da,X,INSERT_VALUES,localX,ierr); CHKERRQ(ierr) call VecGetArrayF90(localX,xx,ierr); CHKERRQ(ierr) call VecGetArrayF90(F,ff,ierr); CHKERRQ(ierr) call GetGridInfo(da,grd,ierr); CHKERRQ(ierr) call FunctionLocal(grd,xx,ff,lambda,ierr); CHKERRQ(ierr) call VecRestoreArrayF90(F,ff,ierr); CHKERRQ(ierr) call VecRestoreArrayF90(localX,xx,ierr); CHKERRQ(ierr) call DMRestoreLocalVector(da,localX,ierr); CHKERRQ(ierr) end subroutine FormFunction subroutine FormJacobian(da, X, J, lambda, ierr) use Bratu2D implicit none DM da Vec X Mat J PetscReal lambda PetscErrorCode ierr ! type(gridinfo) :: grd Vec :: localX PetscScalar,pointer :: xx(:) call DMGetLocalVector(da,localX,ierr); CHKERRQ(ierr) call DMGlobalToLocalBegin(da,X,INSERT_VALUES,localX,ierr); CHKERRQ(ierr) call DMGlobalToLocalEnd(da,X,INSERT_VALUES,localX,ierr); CHKERRQ(ierr) call VecGetArrayF90(localX,xx,ierr); CHKERRQ(ierr) call GetGridInfo(da,grd,ierr); CHKERRQ(ierr) call JacobianLocal(grd,xx,J,lambda,ierr); CHKERRQ(ierr) call VecRestoreArrayF90(localX,xx,ierr); CHKERRQ(ierr) call DMRestoreLocalVector(da,localX,ierr); CHKERRQ(ierr) call MatAssemblyBegin(J,MAT_FINAL_ASSEMBLY,ierr); CHKERRQ(ierr) call MatAssemblyEnd (J,MAT_FINAL_ASSEMBLY,ierr); CHKERRQ(ierr) end subroutine FormJacobian ! -------------------------------------------------------------------- ! Local Variables: ! mode: f90 ! End: petsc4py-3.7.0/demo/wrap-f2py/.f2py_f2cmap0000644000175000001440000000004312711377604020752 0ustar dalcinlusers00000000000000{'integer':{'HANDLE_KIND':'long'}} petsc4py-3.7.0/demo/wrap-f2py/Bratu2D.pyf0000644000175000001440000000204312711377604020626 0ustar dalcinlusers00000000000000! -*- f90 -*- python module Bratu2D usercode ''' #include "Bratu2Dmodule.h" ''' interface subroutine FormInitGuess(dm, x, param, ierr) !integer, parameter :: HANDLE_KIND=4 integer(kind=HANDLE_KIND) dm ! DM integer(kind=HANDLE_KIND) x ! Vec real(kind=8) param integer, intent(out) :: ierr end subroutine FormInitGuess subroutine FormFunction(dm, x, f, param, ierr) !integer, parameter :: HANDLE_KIND=4 integer(kind=HANDLE_KIND) dm ! DM integer(kind=HANDLE_KIND) x ! Vec integer(kind=HANDLE_KIND) f ! Vec real(kind=8) param integer, intent(out) :: ierr end subroutine FormFunction subroutine FormJacobian(dm, x, J, param, ierr) !integer, parameter :: HANDLE_KIND=4 integer(kind=HANDLE_KIND) dm ! DM integer(kind=HANDLE_KIND) x ! Vec integer(kind=HANDLE_KIND) J ! Vec real(kind=8) param integer, intent(out) :: ierr end subroutine FormJacobian end interface end python module Bratu2D petsc4py-3.7.0/demo/bratu3d/0000755000175000001440000000000012711405164016352 5ustar dalcinlusers00000000000000petsc4py-3.7.0/demo/bratu3d/bratu3d.py0000644000175000001440000001533212711377604020303 0ustar dalcinlusers00000000000000# ------------------------------------------------------------------------ # # Solid Fuel Ignition (SFI) problem. This problem is modeled by the # partial differential equation # # -Laplacian(u) - lambda * exp(u) = 0, 0 < x,y,z < 1, # # with boundary conditions # # u = 0 for x = 0, x = 1, y = 0, y = 1, z = 0, z = 1 # # A finite difference approximation with the usual 7-point stencil # is used to discretize the boundary value problem to obtain a # nonlinear system of equations. The problem is solved in a 3D # rectangular domain, using distributed arrays (DAs) to partition # the parallel grid. # # ------------------------------------------------------------------------ try: range = xrange except: pass import sys, petsc4py petsc4py.init(sys.argv) from numpy import exp, sqrt from petsc4py import PETSc class Bratu3D(object): def __init__(self, da, lambda_): assert da.getDim() == 3 self.da = da self.lambda_ = lambda_ self.localX = da.createLocalVec() def formInitGuess(self, snes, X): # x = self.da.getVecArray(X) # mx, my, mz = self.da.getSizes() hx, hy, hz = [1.0/(m-1) for m in [mx, my, mz]] lambda_ = self.lambda_ scale = lambda_/(lambda_ + 1.0) # (xs, xe), (ys, ye), (zs, ze) = self.da.getRanges() for k in range(zs, ze): min_k = min(k,mz-k-1)*hz for j in range(ys, ye): min_j = min(j,my-j-1)*hy for i in range(xs, xe): min_i = min(i,mx-i-1)*hx if (i==0 or j==0 or k==0 or i==mx-1 or j==my-1 or k==mz-1): # boundary points x[i, j, k] = 0.0 else: # interior points min_kij = min(min_i,min_j,min_k) x[i, j, k] = scale*sqrt(min_kij) def formFunction(self, snes, X, F): # self.da.globalToLocal(X, self.localX) x = self.da.getVecArray(self.localX) f = self.da.getVecArray(F) # mx, my, mz = self.da.getSizes() hx, hy, hz = [1.0/m for m in [mx, my, mz]] hxhyhz = hx*hy*hz hxhzdhy = hx*hz/hy; hyhzdhx = hy*hz/hx; hxhydhz = hx*hy/hz; lambda_ = self.lambda_ # (xs, xe), (ys, ye), (zs, ze) = self.da.getRanges() for k in range(zs, ze): for j in range(ys, ye): for i in range(xs, xe): if (i==0 or j==0 or k==0 or i==mx-1 or j==my-1 or k==mz-1): f[i, j, k] = x[i, j, k] - 0 else: u = x[ i , j , k ] # center u_e = x[i+1 , j , k ] # east u_w = x[i-1 , j , k ] # west u_n = x[ i , j+1 , k ] # north u_s = x[ i , j-1 , k ] # south u_u = x[ i , j , k+1] # up u_d = x[ i , j , k-1] # down u_xx = (-u_e + 2*u - u_w)*hyhzdhx u_yy = (-u_n + 2*u - u_s)*hxhzdhy u_zz = (-u_u + 2*u - u_d)*hxhydhz f[i, j, k] = u_xx + u_yy + u_zz \ - lambda_*exp(u)*hxhyhz def formJacobian(self, snes, X, J, P): # self.da.globalToLocal(X, self.localX) x = self.da.getVecArray(self.localX) # mx, my, mz = self.da.getSizes() hx, hy, hz = [1.0/m for m in [mx, my, mz]] hxhyhz = hx*hy*hz hxhzdhy = hx*hz/hy; hyhzdhx = hy*hz/hx; hxhydhz = hx*hy/hz; lambda_ = self.lambda_ # P.zeroEntries() row = PETSc.Mat.Stencil() col = PETSc.Mat.Stencil() # (xs, xe), (ys, ye), (zs, ze) = self.da.getRanges() for k in range(zs, ze): for j in range(ys, ye): for i in range(xs, xe): row.index = (i,j,k) row.field = 0 if (i==0 or j==0 or k==0 or i==mx-1 or j==my-1 or k==mz-1): P.setValueStencil(row, row, 1.0) else: u = x[i,j,k] diag = (2*(hyhzdhx+hxhzdhy+hxhydhz) - lambda_*exp(u)*hxhyhz) for index, value in [ ((i,j,k-1), -hxhydhz), ((i,j-1,k), -hxhzdhy), ((i-1,j,k), -hyhzdhx), ((i, j, k), diag), ((i+1,j,k), -hyhzdhx), ((i,j+1,k), -hxhzdhy), ((i,j,k+1), -hxhydhz), ]: col.index = index col.field = 0 P.setValueStencil(row, col, value) P.assemble() if J != P: J.assemble() # matrix-free operator return PETSc.Mat.Structure.SAME_NONZERO_PATTERN OptDB = PETSc.Options() n = OptDB.getInt('n', 16) nx = OptDB.getInt('nx', n) ny = OptDB.getInt('ny', n) nz = OptDB.getInt('nz', n) lambda_ = OptDB.getReal('lambda', 6.0) da = PETSc.DMDA().create([nx, ny, nz], stencil_width=1) pde = Bratu3D(da, lambda_) snes = PETSc.SNES().create() F = da.createGlobalVec() snes.setFunction(pde.formFunction, F) fd = OptDB.getBool('fd', False) mf = OptDB.getBool('mf', False) if mf: J = None snes.setUseMF() else: J = da.createMat() snes.setJacobian(pde.formJacobian, J) if fd: snes.setUseFD() snes.getKSP().setType('cg') snes.setFromOptions() X = da.createGlobalVec() pde.formInitGuess(snes, X) snes.solve(None, X) U = da.createNaturalVec() da.globalToNatural(X, U) if OptDB.getBool('plot_mpl', False): def plot_mpl(da, U): comm = da.getComm() rank = comm.getRank() scatter, U0 = PETSc.Scatter.toZero(U) scatter.scatter(U, U0, False, PETSc.Scatter.Mode.FORWARD) if rank == 0: try: from matplotlib import pylab except ImportError: PETSc.Sys.Print("matplotlib not available") else: from numpy import mgrid nx, ny, nz = da.sizes solution = U0[...].reshape(da.sizes, order='f') xx, yy = mgrid[0:1:1j*nx,0:1:1j*ny] pylab.contourf(xx, yy, solution[:, :, nz//2]) pylab.axis('equal') pylab.xlabel('X') pylab.ylabel('Y') pylab.title('Z/2') pylab.show() comm.barrier() plot_mpl(da, U) petsc4py-3.7.0/demo/bratu3d/makefile0000644000175000001440000000047612711377604020070 0ustar dalcinlusers00000000000000# -*- makefile -*- MPIEXEC= PYTHON=python .PHONY:test test: run clean .PHONY:run run: run_fd run_mf .PHONY:run_fd run_fd: ${MPIEXEC} ${PYTHON} bratu3d.py -fd -nx 7 -ny 8 -nz 9 .PHONY:run_mf run_mf: ${MPIEXEC} ${PYTHON} bratu3d.py -mf -nx 9 -ny 8 -nz 7 .PHONY:clean clean: ${RM} *.py[co] ${RM} -r __pycache__ petsc4py-3.7.0/demo/perftest/0000755000175000001440000000000012711405164016642 5ustar dalcinlusers00000000000000petsc4py-3.7.0/demo/perftest/App.f900000644000175000001440000000627412711377604017722 0ustar dalcinlusers00000000000000subroutine formFunction_C(nx, ny, nz, h, t, x, xdot, f) & bind(C, name="formFunction") use ISO_C_BINDING, only: C_INT, C_DOUBLE implicit none integer(kind=C_INT), intent(in) :: nx, ny, nz real(kind=C_DOUBLE), intent(in) :: h(3), t real(kind=C_DOUBLE), intent(in) :: x(nx,ny,nz), xdot(nx,ny,nz) real(kind=C_DOUBLE), intent(inout) :: f(nx,ny,nz) call formfunction(nx, ny, nz, h, t, x, xdot, f) end subroutine formFunction_C subroutine formInitial_C(nx, ny, nz, h, t, x) & bind(C, name="formInitial") use ISO_C_BINDING, only: C_INT, C_DOUBLE implicit none integer(kind=C_INT), intent(in) :: nx, ny, nz real(kind=C_DOUBLE), intent(in) :: h(3), t real(kind=C_DOUBLE), intent(inout) :: x(nx,ny,nz) call forminitial(nx, ny, nz, h, t, x) end subroutine formInitial_C subroutine evalK (P, K) real(kind=8), intent(in) :: P real(kind=8), intent(out) :: K if (P >= 0.0) then K = 1.0 else K = 1.0/(1+P**2) end if end subroutine evalK subroutine fillK (P, K) real(kind=8), intent(in) :: P(-1:1) real(kind=8), intent(out) :: K(-1:1) real(kind=8) Ka, Kb call evalK((P(-1)+P( 0))/2.0, Ka) call evalK((P( 0)+P( 1))/2.0, Kb) K(-1) = -Ka K( 0) = Ka + Kb K(+1) = -Kb end subroutine fillK subroutine forminitial(nx, ny, nz, h, t, x) implicit none !f2py intent(hide) :: nx = shape(x,0) !f2py intent(hide) :: ny = shape(x,1) !f2py intent(hide) :: nz = shape(x,2) integer, intent(in) :: nx, ny, nz real(kind=8), intent(in) :: h(3), t real(kind=8), intent(inout) :: x(nx,ny,nz) ! x(:,:,:) = 0.0 end subroutine forminitial subroutine formfunction(nx, ny, nz, h, t, x, xdot, f) implicit none !f2py intent(hide) :: nx = shape(x,0) !f2py intent(hide) :: ny = shape(x,1) !f2py intent(hide) :: nz = shape(x,2) integer, intent(in) :: nx, ny, nz real(kind=8), intent(in) :: h(3), t real(kind=8), intent(in) :: x(nx,ny,nz), xdot(nx,ny,nz) real(kind=8), intent(inout) :: f(nx,ny,nz) ! integer :: i,j,k,ii(-1:1),jj(-1:1),kk(-1:1) real(kind=8) :: K1(-1:1), K2(-1:1), K3(-1:1) real(kind=8) :: P1(-1:1), P2(-1:1), P3(-1:1) ! do k=1,nz do j=1,ny do i=1,nx ! ii = (/i-1, i, i+1/) if (i == 1) then ii(-1) = i else if (i == nx) then ii(+1) = i endif ! jj = (/j-1, j, j+1/) if (j == 1) then jj(-1) = j else if (j == ny) then jj(+1) = j end if ! kk = (/k-1, k, k+1/) if (k == 1) then kk(-1) = k else if (k == nz) then kk(+1) = k end if ! P1 = x(ii,j,k) P2 = x(i,jj,k) P3 = x(i,j,kk) call fillK(P1,K1) call fillK(P2,K2) call fillK(P3,K3) f(i,j,k) = & xdot(i,j,k) + & sum(K1*P1)/h(1)**2 + & sum(K2*P2)/h(2)**2 + & sum(K3*P3)/h(3)**2 ! end do !i end do !j end do !k ! i = nx/4+1 j = ny/4+1 k = nz/2+1 f(i,j,k:nz) = f(i,j,k:nz) + 300.0 ! end subroutine formfunction petsc4py-3.7.0/demo/perftest/App.pyf0000644000175000001440000000156512711377604020120 0ustar dalcinlusers00000000000000! -*- f90 -*- python module App interface subroutine formFunction(nx, ny, nz, h, t, x, xdot, f) intent(c) formFunction integer, intent(in), intent(hide) :: nx = shape(x,0) integer, intent(in), intent(hide) :: ny = shape(x,1) integer, intent(in), intent(hide) :: nz = shape(x,2) real(kind=8), intent(in) :: h(3), t real(kind=8), intent(in) :: x(nx,ny,nz), xdot(nx,ny,nz) real(kind=8), intent(inout) :: f(nx,ny,nz) end subroutine formFunction subroutine formInitial(nx, ny, nz, h, t, x) intent(c) formInitial integer, intent(in), intent(hide) :: nx = shape(x,0) integer, intent(in), intent(hide) :: ny = shape(x,1) integer, intent(in), intent(hide) :: nz = shape(x,2) real(kind=8), intent(in) :: h(3), t real(kind=8), intent(inout) :: x(nx,ny,nz) end subroutine formFunction end python module App petsc4py-3.7.0/demo/perftest/makefile0000644000175000001440000000101612711377604020347 0ustar dalcinlusers00000000000000# -*- makefile -*- MPIEXEC= PYTHON=python .PHONY:test test: run clean .PHONY:run run: run_py run_cc SCRIPT=driver MODULE=App .PHONY:run_py run_py: ${MODULE}.so ${MPIEXEC} ${PYTHON} ${SCRIPT}.py EXECUTABLE=driver .PHONY:run_cc run_cc: ${EXECUTABLE}.exe ${MPIEXEC} ./${EXECUTABLE}.exe ${MODULE}.so: ${MAKE} -f makefile.f2py ${EXECUTABLE}.exe: ${MAKE} -f makefile.petsc \ PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} .PHONY:clean clean: ${RM} -r __pycache__ *.py[co] ${RM} ${MODULE}.so ${EXECUTABLE}.exe petsc4py-3.7.0/demo/perftest/makefile.petsc0000644000175000001440000000071512711377604021471 0ustar dalcinlusers00000000000000# -*- makefile -*- EXECUTABLE=driver .PHONY:all all: ${EXECUTABLE}.exe SOURCEC=${EXECUTABLE}.c SOURCEF=App.f90 OBJSC=${SOURCEC:.c=.o} OBJSF=${SOURCEF:.f90=.o} ${EXECUTABLE}.exe: ${SOURCEC} ${SOURCEF} -${PETSC_FCOMPILE} -${PETSC_COMPILE} -${CLINKER} -o $@ ${PETSC_TS_LIB} ${OBJSC} ${OBJSF} -${RM} ${OBJSC} ${OBJSF} include ${PETSC_DIR}/lib/petsc/conf/variables include ${PETSC_DIR}/lib/petsc/conf/rules OBJSC=${SOURCEC:.c=.o} OBJSF=${SOURCEF:.f90=.o} petsc4py-3.7.0/demo/perftest/driver.py0000644000175000001440000000671712711404715020523 0ustar dalcinlusers00000000000000#!/usr/bin/env python import sys, petsc4py petsc4py.init(sys.argv) from petsc4py import PETSc import numpy as np try: from matplotlib import pylab except ImportError: pylab = None # this user class is an application # context for the nonlinear problem # at hand; it contains some parametes # and knows how to compute residuals class AppCtx: def __init__(self, nx, ny, nz): self.n = np.array([nx, ny, nz], dtype='i') self.h = np.array([1.0/(n-1) for n in self.n], dtype='d') from App import formFunction from App import formInitial self._formFunction = formFunction self._formInitial = formInitial def formInitial(self, t, X): xx = X.getArray(readonly=0).reshape(self.n, order='f') self._formInitial(self.h, t, xx) def formFunction(self, ts, t, X, Xdot, F): n = self.n h = self.h x = X.getArray(readonly=1).reshape(n, order='f') xdot = Xdot.getArray(readonly=1).reshape(n, order='f') f = F[...].reshape(n, order='f') self._formFunction(h, t, x, xdot, f) def plot(self, t, x): nx, ny, nz = self.n from numpy import mgrid # U = x.getArray(readonly=1).reshape(nx,ny,nz, order='f') # X, Y = mgrid[0:1:1j*nx,0:1:1j*ny] Z = U[:,:,nz//2] pylab.figure(0) pylab.contourf(X,Y,Z) pylab.colorbar() pylab.plot(X.ravel(),Y.ravel(),'.k') pylab.title('z=0.50') pylab.xlabel('x') pylab.ylabel('y') pylab.axis('equal') # X, Y = mgrid[0:1:1j*nx,0:1:1j*nz] Z = U[:,ny//4,:] pylab.figure(1) pylab.contourf(X,Y,Z) pylab.colorbar() pylab.plot(X.ravel(),Y.ravel(),'.k') pylab.title('y=0.25') pylab.xlabel('x') pylab.ylabel('z') pylab.axis('equal') # X, Y = mgrid[0:1:1j*ny,0:1:1j*nz] Z = U[nx//2,:,:] pylab.figure(2) pylab.contourf(X,Y,Z) pylab.colorbar() pylab.plot(X.ravel(),Y.ravel(),'.k') pylab.title('x=0.50') pylab.xlabel('y') pylab.ylabel('z') pylab.axis('equal') def run_test(nx,ny,nz,samples,plot=False): ts = PETSc.TS().create() ts.setType('theta') ts.setTheta(1.0) ts.setTimeStep(0.01) ts.setTime(0.0) ts.setMaxTime(1.0) ts.setMaxSteps(10) eft = PETSc.TS.ExactFinalTime.STEPOVER ts.setExactFinalTime(eft) x = PETSc.Vec().createSeq(nx*ny*nz) ts.setSolution(x) app = AppCtx(nx, ny, nz) f = PETSc.Vec().createSeq(nx*ny*nz) ts.setIFunction(app.formFunction, f) ts.snes.setUseMF(1) ts.snes.ksp.setType('cg') ts.setFromOptions() ts.setUp() wt = 1e300 for i in range(samples): app.formInitial(0, x) t1 = PETSc.Log.getTime() ts.solve(x) t2 = PETSc.Log.getTime() wt = min(wt,t2-t1) if plot and pylab: app.plot(ts.time, x) return wt OptDB = PETSc.Options() start = OptDB.getInt('start', 12) step = OptDB.getInt('step', 4) stop = OptDB.getInt('stop', start) samples = OptDB.getInt('samples', 1) plot = OptDB.getBool('plot', False) if plot and not pylab: PETSc.Sys.Print("matplotlib not available") for n in range(start, stop+step, step): nx = ny = nz = n+1 wt = run_test(nx,ny,nz,samples,plot) PETSc.Sys.Print("Grid %3d x %3d x %3d -> %f seconds (%2d samples)" % (nx,ny,nz,wt,samples)) if plot and pylab: pylab.show() petsc4py-3.7.0/demo/perftest/driver.c0000644000175000001440000001046012711404715020303 0ustar dalcinlusers00000000000000#include EXTERN_C_BEGIN extern void formInitial(int*,int*,int*,double*, double*,double*); extern void formFunction(const int*,const int*,const int*,const double*, const double*,const double[],const double[],double[]); EXTERN_C_END typedef struct AppCtx { PetscInt nx,ny,nz; PetscScalar h[3]; } AppCtx; #undef __FUNCT__ #define __FUNCT__ "FormInitial" PetscErrorCode FormInitial(PetscReal t, Vec X, void *ctx) { PetscScalar *x; AppCtx *app = (AppCtx*) ctx; PetscErrorCode ierr; PetscFunctionBegin; ierr = VecGetArray(X,&x);CHKERRQ(ierr); /**/ formInitial(&app->nx,&app->ny,&app->nz,app->h, &t,x); /**/ ierr = VecRestoreArray(X,&x);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "FormFunction" PetscErrorCode FormFunction(TS ts, PetscReal t, Vec X, Vec Xdot,Vec F, void *ctx) { const PetscScalar *x; const PetscScalar *xdot; PetscScalar *f; AppCtx *app = (AppCtx*) ctx; PetscErrorCode ierr; PetscFunctionBegin; ierr = VecGetArrayRead(X,&x);CHKERRQ(ierr); ierr = VecGetArrayRead(Xdot,&xdot);CHKERRQ(ierr); ierr = VecGetArray(F,&f);CHKERRQ(ierr); /**/ formFunction(&app->nx,&app->ny,&app->nz,app->h, &t,x,xdot,f); /**/ ierr = VecRestoreArrayRead(X,&x);CHKERRQ(ierr); ierr = VecRestoreArrayRead(Xdot,&xdot);CHKERRQ(ierr); ierr = VecRestoreArray(F,&f);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "RunTest" PetscErrorCode RunTest(int nx, int ny, int nz, int loops, double *wt) { Vec x,f; TS ts; AppCtx _app,*app=&_app; double t1,t2; PetscErrorCode ierr; PetscFunctionBegin; app->nx = nx; app->h[0] = 1./(nx-1); app->ny = ny; app->h[1] = 1./(ny-1); app->nz = nz; app->h[2] = 1./(nz-1); ierr = VecCreate(PETSC_COMM_SELF,&x);CHKERRQ(ierr); ierr = VecSetSizes(x,nx*ny*nz,nx*ny*nz);CHKERRQ(ierr); ierr = VecSetUp(x);CHKERRQ(ierr); ierr = VecDuplicate(x,&f);CHKERRQ(ierr); ierr = TSCreate(PETSC_COMM_SELF,&ts);CHKERRQ(ierr); ierr = TSSetProblemType(ts,TS_NONLINEAR);CHKERRQ(ierr); ierr = TSSetType(ts,TSTHETA);CHKERRQ(ierr); ierr = TSThetaSetTheta(ts,1.0);CHKERRQ(ierr); ierr = TSSetTimeStep(ts,0.01);CHKERRQ(ierr); ierr = TSSetTime(ts,0.0);CHKERRQ(ierr); ierr = TSSetDuration(ts,10,1.0);CHKERRQ(ierr); ierr = TSSetExactFinalTime(ts,TS_EXACTFINALTIME_STEPOVER);CHKERRQ(ierr); ierr = TSSetSolution(ts,x);CHKERRQ(ierr); ierr = TSSetIFunction(ts,f,FormFunction,app);CHKERRQ(ierr); ierr = PetscOptionsSetValue(NULL,"-snes_mf","1");CHKERRQ(ierr); { SNES snes; KSP ksp; ierr = TSGetSNES(ts,&snes);CHKERRQ(ierr); ierr = SNESGetKSP(snes,&ksp);CHKERRQ(ierr); ierr = KSPSetType(ksp,KSPCG);CHKERRQ(ierr); } ierr = TSSetFromOptions(ts);CHKERRQ(ierr); ierr = TSSetUp(ts);CHKERRQ(ierr); *wt = 1e300; while (loops-- > 0) { ierr = FormInitial(0.0,x,app);CHKERRQ(ierr); ierr = PetscTime(&t1);CHKERRQ(ierr); ierr = TSSolve(ts,x);CHKERRQ(ierr); ierr = PetscTime(&t2);CHKERRQ(ierr); *wt = PetscMin(*wt,t2-t1); } ierr = VecDestroy(&x);CHKERRQ(ierr); ierr = VecDestroy(&f);CHKERRQ(ierr); ierr = TSDestroy(&ts);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "GetInt" PetscErrorCode GetInt(const char* name, PetscInt *v, PetscInt defv) { PetscErrorCode ierr; PetscFunctionBegin; *v = defv; ierr = PetscOptionsGetInt(NULL,NULL,name,v,NULL);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "main" int main(int argc, char *argv[]) { double wt; PetscInt n,start,step,stop,samples; PetscErrorCode ierr; ierr = PetscInitialize(&argc,&argv,NULL,NULL);CHKERRQ(ierr); ierr = GetInt("-start", &start, 12);CHKERRQ(ierr); ierr = GetInt("-step", &step, 4);CHKERRQ(ierr); ierr = GetInt("-stop", &stop, start);CHKERRQ(ierr); ierr = GetInt("-samples", &samples, 1);CHKERRQ(ierr); for (n=start; n<=stop; n+=step){ int nx=n+1, ny=n+1, nz=n+1; ierr = RunTest(nx,ny,nz,samples,&wt);CHKERRQ(ierr); ierr = PetscPrintf(PETSC_COMM_SELF, "Grid %3d x %3d x %3d -> %f seconds (%2d samples)\n", nx,ny,nz,wt,samples);CHKERRQ(ierr); } ierr = PetscFinalize();CHKERRQ(ierr); return 0; } petsc4py-3.7.0/demo/perftest/makefile.f2py0000644000175000001440000000042312711377604021227 0ustar dalcinlusers00000000000000# -*- makefile -*- MODULE=App .PHONY:all all: ${MODULE}.so F2PY = f2py F2PY_FLAGS = --quiet F2PY_FLAGS += --noarch --f90flags='' F2PY_FLAGS += -DF2PY_REPORT_ON_ARRAY_COPY=1 ${MODULE}.so: ${MODULE}.pyf ${MODULE}.f90 ${F2PY} ${F2PY_FLAGS} -m ${MODULE} -c $< ${MODULE}.f90 petsc4py-3.7.0/demo/ode/0000755000175000001440000000000012711405164015555 5ustar dalcinlusers00000000000000petsc4py-3.7.0/demo/ode/orego.py0000644000175000001440000000716512711377604017262 0ustar dalcinlusers00000000000000# Oregonator: stiff 3-variable oscillatory ODE system from chemical reactions, # problem OREGO in Hairer&Wanner volume 2 # See also http://www.scholarpedia.org/article/Oregonator import sys, petsc4py petsc4py.init(sys.argv) from petsc4py import PETSc class Orego(object): n = 3 comm = PETSc.COMM_SELF def evalSolution(self, t, x): assert t == 0.0, "only for t=0.0" x.setArray([1, 2, 3]) def evalFunction(self, ts, t, x, xdot, f): f.setArray([xdot[0] - 77.27*(x[1] + x[0]*(1 - 8.375e-6*x[0] - x[1])), xdot[1] - 1/77.27*(x[2] - (1 + x[0])*x[1]), xdot[2] - 0.161*(x[0] - x[2])]) def evalJacobian(self, ts, t, x, xdot, a, A, B): B[:,:] = [[a - 77.27*((1 - 8.375e-6*x[0] - x[1]) - 8.375e-6*x[0]), -77.27*(1 - x[0]), 0], [1/77.27*x[1], a + 1/77.27*(1 + x[0]), -1/77.27], [-0.161, 0, a + 0.161]] B.assemble() if A != B: A.assemble() return True # same nonzero pattern OptDB = PETSc.Options() ode = Orego() J = PETSc.Mat().createDense([ode.n, ode.n], comm=ode.comm) x = PETSc.Vec().createSeq(ode.n, comm=ode.comm) f = x.duplicate() ts = PETSc.TS().create(comm=ode.comm) ts.setType(ts.Type.ROSW) # Rosenbrock-W. ARKIMEX is a nonlinearly implicit alternative. ts.setIFunction(ode.evalFunction, f) ts.setIJacobian(ode.evalJacobian, J) history = [] def monitor(ts, i, t, x): xx = x[:].tolist() history.append((i, t, xx)) ts.setMonitor(monitor) ts.setTime(0.0) ts.setTimeStep(0.1) ts.setMaxTime(360) ts.setMaxSteps(2000) ts.setMaxSNESFailures(-1) # allow an unlimited number of failures (step will be rejected and retried) # Set a different tolerance on each variable. Can use a scalar or a vector for either or both atol and rtol. vatol = x.duplicate(array=[1e-2, 1e-1, 1e-4]) ts.setTolerances(atol=vatol,rtol=1e-3) # adaptive controller attempts to match this tolerance snes = ts.getSNES() # Nonlinear solver snes.setTolerances(max_it=10) # Stop nonlinear solve after 10 iterations (TS will retry with shorter step) ksp = snes.getKSP() # Linear solver ksp.setType(ksp.Type.PREONLY) # Just use the preconditioner without a Krylov method pc = ksp.getPC() # Preconditioner pc.setType(pc.Type.LU) # Use a direct solve ts.setFromOptions() # Apply run-time options, e.g. -ts_adapt_monitor -ts_type arkimex -snes_converged_reason ode.evalSolution(0.0, x) ts.solve(x) print('steps %d (%d rejected, %d SNES fails), nonlinear its %d, linear its %d' % (ts.getStepNumber(), ts.getStepRejections(), ts.getSNESFailures(), ts.getSNESIterations(), ts.getKSPIterations())) if OptDB.getBool('plot_history', True): try: from matplotlib import pylab from matplotlib import rc except ImportError: print("matplotlib not available") raise SystemExit import numpy as np ii = np.asarray([v[0] for v in history]) tt = np.asarray([v[1] for v in history]) xx = np.asarray([v[2] for v in history]) rc('text', usetex=True) pylab.suptitle('Oregonator: TS \\texttt{%s}' % ts.getType()) pylab.subplot(2,2,0) pylab.subplots_adjust(wspace=0.3) pylab.semilogy(ii[:-1], np.diff(tt), ) pylab.xlabel('step number') pylab.ylabel('timestep') for i in range(0,3): pylab.subplot(2,2,i+1) pylab.semilogy(tt, xx[:,i], "rgb"[i]) pylab.xlabel('time') pylab.ylabel('$x_%d$' % i) # pylab.savefig('orego-history.png') pylab.show() petsc4py-3.7.0/demo/ode/rober.py0000644000175000001440000000405512711377604017253 0ustar dalcinlusers00000000000000# Stiff 3-variable ODE system from chemical reactions, # due to Robertson (1966), # problem ROBER in Hairer&Wanner, ODE 2, 1996 import sys, petsc4py petsc4py.init(sys.argv) from petsc4py import PETSc class Rober(object): n = 3 comm = PETSc.COMM_SELF def evalSolution(self, t, x): assert t == 0.0, "only for t=0.0" x[:] = [1, 0, 0] x.assemble() def evalFunction(self, ts, t, x, xdot, f): f[:] = [xdot[0] + 0.04*x[0] - 1e4*x[1]*x[2], xdot[1] - 0.04*x[0] + 1e4*x[1]*x[2] + 3e7*x[1]**2, xdot[2] - 3e7*x[1]**2] f.assemble() def evalJacobian(self, ts, t, x, xdot, a, A, B): J = B J[:,:] = [[a + 0.04, -1e4*x[2], -1e4*x[1]], [-0.04, a + 1e4*x[2] + 3e7*2*x[1], 1e4*x[1]], [0, -3e7*2*x[1], a]] J.assemble() if A != B: A.assemble() return True # same nonzero pattern OptDB = PETSc.Options() ode = Rober() J = PETSc.Mat().createDense([ode.n, ode.n], comm=ode.comm) x = PETSc.Vec().createSeq(ode.n, comm=ode.comm) f = x.duplicate() ts = PETSc.TS().create(comm=ode.comm) ts.setProblemType(ts.ProblemType.NONLINEAR) ts.setType(ts.Type.THETA) ts.setIFunction(ode.evalFunction, f) ts.setIJacobian(ode.evalJacobian, J) history = [] def monitor(ts, i, t, x): xx = x[:].tolist() history.append((i, t, xx)) ts.setMonitor(monitor) ts.setTime(0.0) ts.setTimeStep(.001) ts.setMaxTime(1e30) ts.setMaxSteps(100) ts.setFromOptions() ode.evalSolution(0.0, x) ts.solve(x) del ode, J, x, ts try: from matplotlib import pylab except ImportError: print("matplotlib not available") raise SystemExit import numpy as np ii = np.asarray([v[0] for v in history]) tt = np.asarray([v[1] for v in history]) xx = np.asarray([v[2] for v in history]) pylab.figure() pylab.semilogy(ii[:-1], np.diff(tt), ) pylab.xlabel('step') pylab.ylabel('timestep') for i in range(0,3): pylab.figure() pylab.plot(tt, xx[:,i], "rgb"[i]) pylab.xlabel('t') pylab.ylabel('x%d' % i) pylab.show() petsc4py-3.7.0/demo/ode/heat.py0000644000175000001440000001316412711377604017064 0ustar dalcinlusers00000000000000# Solves Heat equation on a periodic domain, using raw VecScatter from __future__ import division import sys, petsc4py petsc4py.init(sys.argv) from petsc4py import PETSc from mpi4py import MPI import numpy class Heat(object): def __init__(self,comm,N): self.comm = comm self.N = N # global problem size self.h = 1/N # grid spacing on unit interval self.n = N // comm.size + int(comm.rank < (N % comm.size)) # owned part of global problem self.start = comm.exscan(self.n) if comm.rank == 0: self.start = 0 gindices = numpy.arange(self.start-1, self.start+self.n+1, dtype=int) % N # periodic self.mat = PETSc.Mat().create(comm=comm) size = (self.n, self.N) # local and global sizes self.mat.setSizes((size,size)) self.mat.setFromOptions() self.mat.setPreallocationNNZ((3,1)) # Conservative preallocation for 3 "local" columns and one non-local # Allow matrix insertion using local indices [0:n+2] lgmap = PETSc.LGMap().create(list(gindices), comm=comm) self.mat.setLGMap(lgmap, lgmap) # Global and local vectors self.gvec = self.mat.createVecRight() self.lvec = PETSc.Vec().create(comm=PETSc.COMM_SELF) self.lvec.setSizes(self.n+2) self.lvec.setUp() # Configure scatter from global to local isg = PETSc.IS().createGeneral(list(gindices), comm=comm) self.g2l = PETSc.Scatter().create(self.gvec, isg, self.lvec, None) self.tozero, self.zvec = PETSc.Scatter.toZero(self.gvec) self.history = [] if False: # Print some diagnostics print('[%d] local size %d, global size %d, starting offset %d' % (comm.rank, self.n, self.N, self.start)) self.gvec.setArray(numpy.arange(self.start,self.start+self.n)) self.gvec.view() self.g2l.scatter(self.gvec, self.lvec, PETSc.InsertMode.INSERT) for rank in range(comm.size): if rank == comm.rank: print('Contents of local Vec on rank %d' % rank) self.lvec.view() comm.barrier() def evalSolution(self, t, x): assert t == 0.0, "only for t=0.0" coord = numpy.arange(self.start, self.start+self.n) / self.N x.setArray((numpy.abs(coord-0.5) < 0.1) * 1.0) def evalFunction(self, ts, t, x, xdot, f): self.g2l.scatter(x, self.lvec, PETSc.InsertMode.INSERT) # lvec is a work vector h = self.h with self.lvec as u, xdot as udot: f.setArray(udot*h + 2*u[1:-1]/h - u[:-2]/h - u[2:]/h) # Scale equation by volume element def evalJacobian(self, ts, t, x, xdot, a, A, B): h = self.h for i in range(self.n): lidx = i + 1 gidx = self.start + i B.setValuesLocal([lidx], [lidx-1,lidx,lidx+1], [-1/h, a*h+2/h, -1/h]) B.assemble() if A != B: A.assemble() # If operator is different from preconditioning matrix return True # same nonzero pattern def monitor(self, ts, i, t, x): if self.history: lasti, lastt, lastx = self.history[-1] if i < lasti + 4 or t < lastt + 1e-4: return self.tozero.scatter(x, self.zvec, PETSc.InsertMode.INSERT) xx = self.zvec[:].tolist() self.history.append((i, t, xx)) def plotHistory(self): try: from matplotlib import pylab, rcParams except ImportError: print("matplotlib not available") raise SystemExit rcParams.update({'text.usetex':True, 'figure.figsize':(10,6)}) #rc('figure', figsize=(600,400)) pylab.title('Heat: TS \\texttt{%s}' % ts.getType()) x = numpy.arange(self.N) / self.N for i,t,u in self.history: pylab.plot(x, u, label='step=%d t=%8.2g'%(i,t)) pylab.xlabel('$x$') pylab.ylabel('$u$') pylab.legend(loc='upper right') pylab.savefig('heat-history.png') #pylab.show() OptDB = PETSc.Options() ode = Heat(MPI.COMM_WORLD, OptDB.getInt('n',100)) x = ode.gvec.duplicate() f = ode.gvec.duplicate() ts = PETSc.TS().create(comm=ode.comm) ts.setType(ts.Type.ROSW) # Rosenbrock-W. ARKIMEX is a nonlinearly implicit alternative. ts.setIFunction(ode.evalFunction, ode.gvec) ts.setIJacobian(ode.evalJacobian, ode.mat) ts.setMonitor(ode.monitor) ts.setTime(0.0) ts.setTimeStep(ode.h**2) ts.setMaxTime(1) ts.setMaxSteps(100) ts.setMaxSNESFailures(-1) # allow an unlimited number of failures (step will be rejected and retried) snes = ts.getSNES() # Nonlinear solver snes.setTolerances(max_it=10) # Stop nonlinear solve after 10 iterations (TS will retry with shorter step) ksp = snes.getKSP() # Linear solver ksp.setType(ksp.Type.CG) # Conjugate gradients pc = ksp.getPC() # Preconditioner if False: # Configure algebraic multigrid, could use run-time options instead pc.setType(pc.Type.GAMG) # PETSc's native AMG implementation, mostly based on smoothed aggregation OptDB['mg_coarse_pc_type'] = 'svd' # more specific multigrid options OptDB['mg_levels_pc_type'] = 'sor' ts.setFromOptions() # Apply run-time options, e.g. -ts_adapt_monitor -ts_type arkimex -snes_converged_reason ode.evalSolution(0.0, x) ts.solve(x) if ode.comm.rank == 0: print('steps %d (%d rejected, %d SNES fails), nonlinear its %d, linear its %d' % (ts.getStepNumber(), ts.getStepRejections(), ts.getSNESFailures(), ts.getSNESIterations(), ts.getKSPIterations())) if OptDB.getBool('plot_history', True) and ode.comm.rank == 0: ode.plotHistory() petsc4py-3.7.0/demo/ode/ce.py0000644000175000001440000000335712711377604016535 0ustar dalcinlusers00000000000000# Stiff scalar valued ODE problem with an exact solution import sys, petsc4py petsc4py.init(sys.argv) from petsc4py import PETSc from math import sin, cos, exp class CE(object): n = 1 comm = PETSc.COMM_SELF def __init__(self, lambda_=1.0): self.lambda_ = lambda_ def evalSolution(self, t, x): l = self.lambda_ x[0] = l/(l*l+1)*(l*cos(t)+sin(t)) - l*l/(l*l+1)*exp(-l*t) x.assemble() def evalFunction(self, ts, t, x, xdot, f): l = self.lambda_ f[0] = xdot[0] + l*(x[0] - cos(t)) f.assemble() def evalJacobian(self, ts, t, x, xdot, a, A, B): J = B l = self.lambda_ J[0,0] = a + l J.assemble() if A != B: A.assemble() return True # same nonzero pattern OptDB = PETSc.Options() lambda_ = OptDB.getScalar('lambda', 10.0) ode = CE(lambda_) J = PETSc.Mat().createDense([ode.n,ode.n], comm=ode.comm) x = PETSc.Vec().createSeq(ode.n, comm=ode.comm) f = x.duplicate() ts = PETSc.TS().create(comm=ode.comm) ts.setProblemType(ts.ProblemType.NONLINEAR) ts.setType(ts.Type.GL) ts.setIFunction(ode.evalFunction, f) ts.setIJacobian(ode.evalJacobian, J) ts.setTime(0.0) ts.setTimeStep(0.001) ts.setMaxTime(10) ts.setMaxSteps(10000) class Monitor(object): def __init__(self, ode): self.ode = ode self.x = PETSc.Vec().createSeq(ode.n, comm=ode.comm) def __call__(self, ts, k, t, x): ode.evalSolution(t, self.x) self.x.axpy(-1, x) e = self.x.norm() h = ts.getTimeStep() PETSc.Sys.Print("step %3d t=%8.2e h=%8.2e error=%8.2e" % (k, t, h, e), comm=self.ode.comm) ts.setMonitor(Monitor(ode)) ts.setFromOptions() ode.evalSolution(0.0, x) ts.solve(x) del ode, J, x, f, ts petsc4py-3.7.0/demo/makefile0000644000175000001440000000033112711377604016512 0ustar dalcinlusers00000000000000.PHONY:all all: -${MAKE} -C binary-io -${MAKE} -C kspsolve -${MAKE} -C bratu2d -${MAKE} -C bratu3d -${MAKE} -C poisson2d -${MAKE} -C poisson3d -${MAKE} -C perftest -${MAKE} -C wrap-swig -${MAKE} -C wrap-f2py petsc4py-3.7.0/demo/bratu2d/0000755000175000001440000000000012711405164016351 5ustar dalcinlusers00000000000000petsc4py-3.7.0/demo/bratu2d/makefile0000644000175000001440000000117212711377604020061 0ustar dalcinlusers00000000000000# -*- makefile -*- MPIEXEC= PYTHON=python F2PY = f2py --quiet F2PY_FLAGS = F2PY_FLAGS = -DF2PY_REPORT_ATEXIT -DF2PY_REPORT_ON_ARRAY_COPY=0 F2PY_FLAGS =--noarch --f90flags='' F2PY_FLAGS +=-DF2PY_REPORT_ON_ARRAY_COPY=1 .PHONY:test test: run clean .PHONY:run run: run_py run_f90 .PHONY:run_py run_py: ${MPIEXEC} ${PYTHON} bratu2d.py -impl python MODULE=bratu2df90 .PHONY:${MODULE} ${MODULE}: ${MODULE}.so ${MODULE}.so: ${MODULE}.f90 ${F2PY} ${F2PY_FLAGS} -c $< -m ${MODULE} .PHONY:run_f90 run_f90: ${MODULE} ${MPIEXEC} ${PYTHON} bratu2d.py -impl fortran .PHONY:clean clean: ${RM} *.py[co] ${MODULE}*.so ${RM} -r __pycache__ petsc4py-3.7.0/demo/bratu2d/bratu2df90.f900000644000175000001440000000166212711377604020567 0ustar dalcinlusers00000000000000! file: bratu2df90.f90 ! to build a Python module, use this: ! $$ f2py -m bratu2df90 -c bratu2df90.f90 subroutine bratu2d (m, n, alpha, x, f) !f2py intent(hide) :: m = shape(x,0) !f2py intent(hide) :: n = shape(x,1) integer :: m, n real(kind=8) :: alpha real(kind=8), intent(in), target :: x(m,n) real(kind=8), intent(inout) :: f(m,n) real(kind=8) :: hx, hy real(kind=8), pointer, & dimension(:,:) :: u, uN, uS, uE, uW ! setup 5-points stencil u => x(2:m-1, 2:n-1) ! center uN => x(2:m-1, 1:n-2) ! north uS => x(2:m-1, 3:n ) ! south uW => x(1:m-2, 2:n-1) ! west uE => x(3:m, 2:n-1) ! east ! compute nonlinear function hx = 1.0/(m-1) ! x grid spacing hy = 1.0/(n-1) ! y grid spacing f(:,:) = x f(2:m-1, 2:n-1) = & (2*u - uE - uW) * (hy/hx) & + (2*u - uN - uS) * (hx/hy) & - alpha * exp(u) * (hx*hy) end subroutine bratu2d petsc4py-3.7.0/demo/bratu2d/bratu2dnpy.py0000644000175000001440000000105712711377604021027 0ustar dalcinlusers00000000000000# file: bratu2dnpy.py def bratu2d(alpha, x, f): # get 'exp' from numpy from numpy import exp # setup 5-points stencil u = x[1:-1, 1:-1] # center uN = x[1:-1, :-2] # north uS = x[1:-1, 2: ] # south uW = x[ :-2, 1:-1] # west uE = x[2:, 1:-1] # east # compute nonlinear function nx, ny = x.shape hx = 1.0/(nx-1) # x grid spacing hy = 1.0/(ny-1) # y grid spacing f[:,:] = x f[1:-1, 1:-1] = \ (2*u - uE - uW) * (hy/hx) \ + (2*u - uN - uS) * (hx/hy) \ - alpha * exp(u) * (hx*hy) petsc4py-3.7.0/demo/bratu2d/bratu2d.py0000644000175000001440000000446312711377604020304 0ustar dalcinlusers00000000000000import sys, petsc4py petsc4py.init(sys.argv) from petsc4py import PETSc # this user class is an application # context for the nonlinear problem # at hand; it contains some parametes # and knows how to compute residuals class Bratu2D: def __init__(self, nx, ny, alpha, impl='python'): self.nx = nx # x grid size self.ny = ny # y grid size self.alpha = alpha if impl == 'python': from bratu2dnpy import bratu2d order = 'c' elif impl == 'fortran': from bratu2df90 import bratu2d order = 'f' else: raise ValueError('invalid implementation') self.compute = bratu2d self.order = order def evalFunction(self, snes, X, F): nx, ny = self.nx, self.ny alpha = self.alpha order = self.order x = X.getArray(readonly=1).reshape(nx, ny, order=order) f = F.getArray(readonly=0).reshape(nx, ny, order=order) self.compute(alpha, x, f) # convenience access to # PETSc options database OptDB = PETSc.Options() nx = OptDB.getInt('nx', 32) ny = OptDB.getInt('ny', nx) alpha = OptDB.getReal('alpha', 6.8) impl = OptDB.getString('impl', 'python') # create application context # and PETSc nonlinear solver appc = Bratu2D(nx, ny, alpha, impl) snes = PETSc.SNES().create() # register the function in charge of # computing the nonlinear residual f = PETSc.Vec().createSeq(nx*ny) snes.setFunction(appc.evalFunction, f) # configure the nonlinear solver # to use a matrix-free Jacobian snes.setUseMF(True) snes.getKSP().setType('cg') snes.setFromOptions() # solve the nonlinear problem b, x = None, f.duplicate() x.set(0) # zero inital guess snes.solve(b, x) if OptDB.getBool('plot', True): da = PETSc.DMDA().create([nx,ny]) u = da.createGlobalVec() x.copy(u) draw = PETSc.Viewer.DRAW() OptDB['draw_pause'] = 1 draw(u) if OptDB.getBool('plot_mpl', False): try: from matplotlib import pylab except ImportError: PETSc.Sys.Print("matplotlib not available") else: from numpy import mgrid X, Y = mgrid[0:1:1j*nx,0:1:1j*ny] Z = x[...].reshape(nx,ny) pylab.figure() pylab.contourf(X,Y,Z) pylab.colorbar() pylab.plot(X.ravel(),Y.ravel(),'.k') pylab.axis('equal') pylab.show() petsc4py-3.7.0/demo/dmplex/0000755000175000001440000000000012711405164016277 5ustar dalcinlusers00000000000000petsc4py-3.7.0/demo/dmplex/distribute_field.py0000644000175000001440000000337712711377604022213 0ustar dalcinlusers00000000000000# -*- coding: utf-8 -*- """ Created on Fri Dec 25 17:03:18 2015 @author: ale """ import sys,petsc4py petsc4py.init(sys.argv) from petsc4py import PETSc import numpy as np dim = 2 if not PETSc.COMM_WORLD.rank: coords = np.asarray([[0.0, 0.0], [0.5, 0.0], [1.0, 0.0], [0.0, 0.5], [0.5, 0.5], [1.0, 0.5], [0.0, 1.0], [0.5, 1.0], [1.0, 1.0]], dtype=float) cells = np.asarray([[0,1,4,3], [1,2,5,4], [3,4,7,6], [4,5,8,7]], dtype=PETSc.IntType) else: coords = np.zeros((0, 2), dtype=float) cells = np.zeros((0, 4), dtype=PETSc.IntType) plex = PETSc.DMPlex().createFromCellList(dim, cells, coords, comm=PETSc.COMM_WORLD) pStart, pEnd = plex.getChart() plex.view() print "pStart, pEnd: ", pStart, pEnd # Create section with 1 field with 1 DoF per vertex, edge amd cell numComp = 1 # Start with an empty vector numDof = [0] * 3 # Field defined on vertexes numDof[0] = 1 # Field defined on edges numDof[1] = 1 # Field defined on cells numDof[2] = 1 origSect = plex.createSection(numComp, numDof) origSect.setFieldName(0, 'TestField') origSect.setUp() origSect.view() plex.setDefaultSection(origSect) origVec = plex.createGlobalVec() #origVec.view() if not PETSc.COMM_WORLD.rank: origVec.setValues(range(pStart, pEnd), range(pStart, pEnd)) origVec.view() if PETSc.COMM_WORLD.size > 1: sf = plex.distribute() sf.view() newSect, newVec = plex.distributeField(sf, origSect, origVec) else: newSect = origSect newVec = origVec newSect.view() newVec.view() petsc4py-3.7.0/demo/wrap-swig/0000755000175000001440000000000012711405164016726 5ustar dalcinlusers00000000000000petsc4py-3.7.0/demo/wrap-swig/run_demo.py0000644000175000001440000000357312711377604021127 0ustar dalcinlusers00000000000000import sys, petsc4py petsc4py.init(sys.argv) from petsc4py import PETSc import Bratu3D as Bratu3D class App(object): def __init__(self, da, lambda_): assert da.getDim() == 3 self.da = da self.params = Bratu3D.Params() self.params.lambda_ = lambda_ def formInitGuess(self, X): X.zeroEntries() # just in case Bratu3D.FormInitGuess(self.da, X, self.params) def formFunction(self, snes, X, F): F.zeroEntries() # just in case Bratu3D.FormFunction(self.da, X, F, self.params) def formJacobian(self, snes, X, J, P): P.zeroEntries() # just in case Bratu3D.FormJacobian(self.da, X, P, self.params) if J != P: J.assemble() # matrix-free operator return PETSc.Mat.Structure.SAME_NONZERO_PATTERN OptDB = PETSc.Options() N = OptDB.getInt('N', 16) lambda_ = OptDB.getReal('lambda', 6.0) do_plot = OptDB.getBool('plot', False) da = PETSc.DMDA().create([N, N, N], stencil_width=1) app = App(da, lambda_) snes = PETSc.SNES().create() F = da.createGlobalVec() snes.setFunction(app.formFunction, F) J = da.createMat() snes.setJacobian(app.formJacobian, J) snes.setFromOptions() X = da.createGlobalVec() app.formInitGuess(X) snes.solve(None, X) U = da.createNaturalVec() da.globalToNatural(X, U) def plot(da, U): scatter, U0 = PETSc.Scatter.toZero(U) scatter.scatter(U, U0, False, PETSc.Scatter.Mode.FORWARD) rank = PETSc.COMM_WORLD.getRank() if rank == 0: solution = U0[...].reshape(da.sizes, order='f').copy() try: from matplotlib import pyplot pyplot.contourf(solution[:, :, N//2]) pyplot.axis('equal') pyplot.show() except: pass PETSc.COMM_WORLD.barrier() scatter.destroy() U0.destroy() if do_plot: plot(da, U) U.destroy() X.destroy() F.destroy() J.destroy() da.destroy() snes.destroy() petsc4py-3.7.0/demo/wrap-swig/setup.py0000644000175000001440000000400012711377604020441 0ustar dalcinlusers00000000000000#!/usr/bin/env python #$ python setup.py build_ext --inplace # a bit of monkeypatching ... try: from numpy.distutils.fcompiler import FCompiler from numpy.distutils.unixccompiler import UnixCCompiler try: # Python 2 meth = UnixCCompiler.runtime_library_dir_option.im_func except AttributeError: # Python 3 meth = UnixCCompiler.runtime_library_dir_option FCompiler.runtime_library_dir_option = meth except Exception: pass def configuration(parent_package='',top_path=None): INCLUDE_DIRS = [] LIBRARY_DIRS = [] LIBRARIES = [] # PETSc import os PETSC_DIR = os.environ['PETSC_DIR'] PETSC_ARCH = os.environ.get('PETSC_ARCH', '') from os.path import join, isdir if PETSC_ARCH and isdir(join(PETSC_DIR, PETSC_ARCH)): INCLUDE_DIRS += [join(PETSC_DIR, PETSC_ARCH, 'include'), join(PETSC_DIR, 'include')] LIBRARY_DIRS += [join(PETSC_DIR, PETSC_ARCH, 'lib')] else: if PETSC_ARCH: pass # XXX should warn ... INCLUDE_DIRS += [join(PETSC_DIR, 'include')] LIBRARY_DIRS += [join(PETSC_DIR, 'lib')] LIBRARIES += [#'petscts', 'petscsnes', 'petscksp', #'petscdm', 'petscmat', 'petscvec', 'petsc'] # PETSc for Python import petsc4py INCLUDE_DIRS += [petsc4py.get_include()] # Configuration from numpy.distutils.misc_util import Configuration config = Configuration('', parent_package, top_path) config.add_extension('_Bratu3D', sources = ['Bratu3D.i', 'Bratu3D.c'], depends = ['Bratu3D.h'], include_dirs=INCLUDE_DIRS + [os.curdir], libraries=LIBRARIES, library_dirs=LIBRARY_DIRS, runtime_library_dirs=LIBRARY_DIRS) return config if __name__ == "__main__": from numpy.distutils.core import setup setup(**configuration(top_path='').todict()) petsc4py-3.7.0/demo/wrap-swig/makefile0000644000175000001440000000112412711377604020433 0ustar dalcinlusers00000000000000# -*- makefile -*- MPIEXEC= PYTHON=python .PHONY:test test: run clean SCRIPT=run_demo MODULE=Bratu3D .PHONY:build build: ${MODULE}.py _${MODULE}.so .PHONY:run run: build ${MPIEXEC} ${PYTHON} ${SCRIPT}.py ${MODULE}.py _${MODULE}.so: ${MODULE}.i ${MODULE}.c ${MODULE}.h CC=${CC} F90=${FC} LDSHARED='${CLINKER} -shared' \ ${PYTHON} setup.py -q build_ext --inplace ${RM} -r build ${MODULE}_wrap.c .PHONY:clean clean:: ${RM} ${MODULE}.py _${MODULE}*.so ${RM} *.py[co] ${RM} -r __pycache__ include ${PETSC_DIR}/lib/petsc/conf/variables include ${PETSC_DIR}/lib/petsc/conf/rules MPIEXEC= petsc4py-3.7.0/demo/wrap-swig/Bratu3D.i0000644000175000001440000000021412711377604020350 0ustar dalcinlusers00000000000000%module Bratu3D %include petsc4py/petsc4py.i %{ #include "Bratu3D.h" %} %include Bratu3D.h /* * Local Variables: * mode: C * End: */ petsc4py-3.7.0/demo/wrap-swig/Bratu3D.h0000644000175000001440000000046412711377604020356 0ustar dalcinlusers00000000000000#ifndef BRATU3D_H #define BRATU3D_H #include typedef struct Params { double lambda_; } Params; PetscErrorCode FormInitGuess(DM da, Vec x, Params *p); PetscErrorCode FormFunction(DM da, Vec x, Vec F, Params *p); PetscErrorCode FormJacobian(DM da, Vec x, Mat J, Params *p); #endif/*BRATU3D_H*/ petsc4py-3.7.0/demo/wrap-swig/Bratu3D.c0000644000175000001440000002200512711377604020344 0ustar dalcinlusers00000000000000/* ------------------------------------------------------------------------ Solid Fuel Ignition (SFI) problem. This problem is modeled by the partial differential equation -Laplacian(u) - lambda * exp(u) = 0, 0 < x,y,z < 1, with boundary conditions u = 0 for x = 0, x = 1, y = 0, y = 1, z = 0, z = 1 A finite difference approximation with the usual 7-point stencil is used to discretize the boundary value problem to obtain a nonlinear system of equations. The problem is solved in a 3D rectangular domain, using distributed arrays (DAs) to partition the parallel grid. ------------------------------------------------------------------------- */ #include "Bratu3D.h" #undef __FUNCT__ #define __FUNCT__ "FormInitGuess" PetscErrorCode FormInitGuess(DM da, Vec X, Params *p) { PetscInt i,j,k,Mx,My,Mz,xs,ys,zs,xm,ym,zm; PetscReal lambda,temp1,hx,hy,hz,tempk,tempj; PetscScalar ***x; PetscErrorCode ierr; PetscFunctionBegin; ierr = DMDAGetInfo(da,PETSC_IGNORE, &Mx,&My,&Mz, PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE, PETSC_IGNORE,PETSC_IGNORE, PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE, PETSC_IGNORE); lambda = p->lambda_; hx = 1.0/(PetscReal)(Mx-1); hy = 1.0/(PetscReal)(My-1); hz = 1.0/(PetscReal)(Mz-1); temp1 = lambda/(lambda + 1.0); /* Get a pointer to vector data. - For default PETSc vectors, VecGetArray() returns a pointer to the data array. Otherwise, the routine is implementation dependent. - You MUST call VecRestoreArray() when you no longer need access to the array. */ ierr = DMDAVecGetArray(da,X,&x);CHKERRQ(ierr); /* Get local grid boundaries (for 3-dimensional DMDA): - xs, ys, zs: starting grid indices (no ghost points) - xm, ym, zm: widths of local grid (no ghost points) */ ierr = DMDAGetCorners(da,&xs,&ys,&zs,&xm,&ym,&zm);CHKERRQ(ierr); /* Compute initial guess over the locally owned part of the grid */ for (k=zs; klambda_; hx = 1.0/(PetscReal)(Mx-1); hy = 1.0/(PetscReal)(My-1); hz = 1.0/(PetscReal)(Mz-1); sc = hx*hy*hz*lambda; hxhzdhy = hx*hz/hy; hyhzdhx = hy*hz/hx; hxhydhz = hx*hy/hz; /* */ ierr = DMGetLocalVector(da,&localX);CHKERRQ(ierr); /* Scatter ghost points to local vector,using the 2-step process DMGlobalToLocalBegin(),DMGlobalToLocalEnd(). By placing code between these two statements, computations can be done while messages are in transition. */ ierr = DMGlobalToLocalBegin(da,X,INSERT_VALUES,localX);CHKERRQ(ierr); ierr = DMGlobalToLocalEnd(da,X,INSERT_VALUES,localX);CHKERRQ(ierr); /* Get pointers to vector data. */ ierr = DMDAVecGetArray(da,localX,&x);CHKERRQ(ierr); ierr = DMDAVecGetArray(da,F,&f);CHKERRQ(ierr); /* Get local grid boundaries. */ ierr = DMDAGetCorners(da,&xs,&ys,&zs,&xm,&ym,&zm);CHKERRQ(ierr); /* Compute function over the locally owned part of the grid. */ for (k=zs; klambda_; hx = 1.0/(PetscReal)(Mx-1); hy = 1.0/(PetscReal)(My-1); hz = 1.0/(PetscReal)(Mz-1); sc = hx*hy*hz*lambda; hxhzdhy = hx*hz/hy; hyhzdhx = hy*hz/hx; hxhydhz = hx*hy/hz; /* */ ierr = DMGetLocalVector(da,&localX);CHKERRQ(ierr); /* Scatter ghost points to local vector, using the 2-step process DMGlobalToLocalBegin(), DMGlobalToLocalEnd(). By placing code between these two statements, computations can be done while messages are in transition. */ ierr = DMGlobalToLocalBegin(da,X,INSERT_VALUES,localX);CHKERRQ(ierr); ierr = DMGlobalToLocalEnd(da,X,INSERT_VALUES,localX);CHKERRQ(ierr); /* Get pointer to vector data. */ ierr = DMDAVecGetArray(da,localX,&x);CHKERRQ(ierr); /* Get local grid boundaries. */ ierr = DMDAGetCorners(da,&xs,&ys,&zs,&xm,&ym,&zm);CHKERRQ(ierr); /* Compute entries for the locally owned part of the Jacobian. - Currently, all PETSc parallel matrix formats are partitioned by contiguous chunks of rows across the processors. - Each processor needs to insert only elements that it owns locally (but any non-local elements will be sent to the appropriate processor during matrix assembly). - Here, we set all entries for a particular row at once. - We can set matrix entries either using either MatSetValuesLocal() or MatSetValues(), as discussed above. */ for (k=zs; k delta_0 * eps**2: A.mult(d, q) alpha = delta / d.dot(q) x.axpy(+alpha, d) r.axpy(-alpha, q) delta_old = delta delta = r.dot(r) beta = delta / delta_old d.aypx(beta, r) i = i + 1 return i, delta**0.5 petsc4py-3.7.0/demo/kspsolve/test_mat_ksp.py0000644000175000001440000000171612711377604021737 0ustar dalcinlusers00000000000000try: execfile except NameError: def execfile(file, globals=globals(), locals=locals()): fh = open(file, "r") try: exec(fh.read()+"\n", globals, locals) finally: fh.close() import petsc4py, sys petsc4py.init(sys.argv) from petsc4py import PETSc execfile('petsc-mat.py') execfile('petsc-ksp.py') OptDB = PETSc.Options() if OptDB.getBool('plot', True): da = PETSc.DMDA().create([m,n]) u = da.createGlobalVec() x.copy(u) draw = PETSc.Viewer.DRAW() OptDB['draw_pause'] = 1 draw(u) if OptDB.getBool('plot_mpl', False): try: from matplotlib import pylab except ImportError: print("matplotlib not available") else: from numpy import mgrid X, Y = mgrid[0:1:1j*m,0:1:1j*n] Z = x[...].reshape(m,n) pylab.figure() pylab.contourf(X,Y,Z) pylab.plot(X.ravel(),Y.ravel(),'.k') pylab.axis('equal') pylab.colorbar() pylab.show() petsc4py-3.7.0/demo/kspsolve/petsc-mat.py0000644000175000001440000000166012711377604021135 0ustar dalcinlusers00000000000000try: range = xrange except: pass from petsc4py import PETSc # grid size and spacing m, n = 32, 32 hx = 1.0/(m-1) hy = 1.0/(n-1) # create sparse matrix A = PETSc.Mat() A.create(PETSc.COMM_WORLD) A.setSizes([m*n, m*n]) A.setType('aij') # sparse A.setPreallocationNNZ(5) # precompute values for setting # diagonal and non-diagonal entries diagv = 2.0/hx**2 + 2.0/hy**2 offdx = -1.0/hx**2 offdy = -1.0/hy**2 # loop over owned block of rows on this # processor and insert entry values Istart, Iend = A.getOwnershipRange() for I in range(Istart, Iend) : A[I,I] = diagv i = I//n # map row number to j = I - i*n # grid coordinates if i> 0 : J = I-n; A[I,J] = offdx if i< m-1: J = I+n; A[I,J] = offdx if j> 0 : J = I-1; A[I,J] = offdy if j< n-1: J = I+1; A[I,J] = offdy # communicate off-processor values # and setup internal data structures # for performing parallel operations A.assemblyBegin() A.assemblyEnd() petsc4py-3.7.0/demo/poisson2d/0000755000175000001440000000000012711405164016726 5ustar dalcinlusers00000000000000petsc4py-3.7.0/demo/poisson2d/poisson2d.py0000644000175000001440000000520312711377604021227 0ustar dalcinlusers00000000000000# ------------------------------------------------------------------------ # # Poisson problem. This problem is modeled by the partial # differential equation # # -Laplacian(u) = 1, 0 < x,y < 1, # # with boundary conditions # # u = 0 for x = 0, x = 1, y = 0, y = 1 # # A finite difference approximation with the usual 7-point stencil # is used to discretize the boundary value problem to obtain a # nonlinear system of equations. The problem is solved in a 2D # rectangular domain, using distributed arrays (DAs) to partition # the parallel grid. # # ------------------------------------------------------------------------ try: range = xrange except: pass import sys, petsc4py petsc4py.init(sys.argv) from petsc4py import PETSc class Poisson2D(object): def __init__(self, da): assert da.getDim() == 2 self.da = da self.localX = da.createLocalVec() def formRHS(self, B): b = self.da.getVecArray(B) mx, my = self.da.getSizes() hx, hy = [1.0/m for m in [mx, my]] (xs, xe), (ys, ye) = self.da.getRanges() for j in range(ys, ye): for i in range(xs, xe): b[i, j] = 1*hx*hy def mult(self, mat, X, Y): # self.da.globalToLocal(X, self.localX) x = self.da.getVecArray(self.localX) y = self.da.getVecArray(Y) # mx, my = self.da.getSizes() hx, hy = [1.0/m for m in [mx, my]] (xs, xe), (ys, ye) = self.da.getRanges() for j in range(ys, ye): for i in range(xs, xe): u = x[i, j] # center u_e = u_w = u_n = u_s = 0 if i > 0: u_w = x[i-1, j] # west if i < mx-1: u_e = x[i+1, j] # east if j > 0: u_s = x[i, j-1] # south if j < ny-1: u_n = x[i, j+1] # north u_xx = (-u_e + 2*u - u_w)*hy/hx u_yy = (-u_n + 2*u - u_s)*hx/hy y[i, j] = u_xx + u_yy OptDB = PETSc.Options() n = OptDB.getInt('n', 16) nx = OptDB.getInt('nx', n) ny = OptDB.getInt('ny', n) da = PETSc.DMDA().create([nx, ny], stencil_width=1) pde = Poisson2D(da) x = da.createGlobalVec() b = da.createGlobalVec() # A = da.createMat('python') A = PETSc.Mat().createPython( [x.getSizes(), b.getSizes()], comm=da.comm) A.setPythonContext(pde) A.setUp() ksp = PETSc.KSP().create() ksp.setOperators(A) ksp.setType('cg') pc = ksp.getPC() pc.setType('none') ksp.setFromOptions() pde.formRHS(b) ksp.solve(b, x) u = da.createNaturalVec() da.globalToNatural(x, u) if OptDB.getBool('plot', True): draw = PETSc.Viewer.DRAW(x.comm) OptDB['draw_pause'] = 1 draw(x) petsc4py-3.7.0/demo/poisson2d/makefile0000644000175000001440000000030512711377604020433 0ustar dalcinlusers00000000000000# -*- makefile -*- MPIEXEC= PYTHON=python .PHONY:test test: run clean .PHONY:run run: ${MPIEXEC} ${PYTHON} poisson2d.py -nx 15 -ny 16 .PHONY:clean clean: ${RM} *.py[co] ${RM} -r __pycache__ petsc4py-3.7.0/demo/wrap-cython/0000755000175000001440000000000012711405164017261 5ustar dalcinlusers00000000000000petsc4py-3.7.0/demo/wrap-cython/Bratu3Dimpl.h0000644000175000001440000000047012711377604021570 0ustar dalcinlusers00000000000000#ifndef BRATU3D_H #define BRATU3D_H #include typedef struct Params { double lambda_; } Params; PetscErrorCode FormInitGuess(DM da, Vec x, Params *p); PetscErrorCode FormFunction(DM da, Vec x, Vec F, Params *p); PetscErrorCode FormJacobian(DM da, Vec x, Mat J, Params *p); #endif /* !BRATU3D_H */ petsc4py-3.7.0/demo/wrap-cython/run_demo.py0000644000175000001440000000243712711377604021460 0ustar dalcinlusers00000000000000import sys, petsc4py petsc4py.init(sys.argv) from petsc4py import PETSc import Bratu3D as Bratu3D OptDB = PETSc.Options() N = OptDB.getInt('N', 16) lambda_ = OptDB.getReal('lambda', 6.0) do_plot = OptDB.getBool('plot', False) da = PETSc.DMDA().create([N, N, N], stencil_width=1) #app = App(da, lambda_) snes = PETSc.SNES().create() F = da.createGlobalVec() snes.setFunction(Bratu3D.formFunction, F, args=(da, lambda_)) J = da.createMat() snes.setJacobian(Bratu3D.formJacobian, J, args=(da, lambda_)) snes.setFromOptions() X = da.createGlobalVec() Bratu3D.formInitGuess(X, da, lambda_) snes.solve(None, X) U = da.createNaturalVec() da.globalToNatural(X, U) def plot(da, U): scatter, U0 = PETSc.Scatter.toZero(U) scatter.scatter(U, U0, False, PETSc.Scatter.Mode.FORWARD) rank = PETSc.COMM_WORLD.getRank() if rank == 0: solution = U0[...].reshape(da.sizes, order='f').copy() try: from matplotlib import pyplot pyplot.contourf(solution[:, :, N//2]) pyplot.axis('equal') pyplot.show() except: pass PETSc.COMM_WORLD.barrier() scatter.destroy() U0.destroy() if do_plot: plot(da, U) U.destroy() X.destroy() F.destroy() J.destroy() da.destroy() snes.destroy() petsc4py-3.7.0/demo/wrap-cython/setup.py0000644000175000001440000000414312711377604021004 0ustar dalcinlusers00000000000000#!/usr/bin/env python #$ python setup.py build_ext --inplace from numpy.distutils.command import build_src # a bit of monkeypatching ... import Cython.Compiler.Main build_src.Pyrex = Cython build_src.have_pyrex = True def have_pyrex(): import sys try: import Cython.Compiler.Main sys.modules['Pyrex'] = Cython sys.modules['Pyrex.Compiler'] = Cython.Compiler sys.modules['Pyrex.Compiler.Main'] = Cython.Compiler.Main return True except ImportError: return False build_src.have_pyrex = have_pyrex def configuration(parent_package='',top_path=None): INCLUDE_DIRS = [] LIBRARY_DIRS = [] LIBRARIES = [] # PETSc import os PETSC_DIR = os.environ['PETSC_DIR'] PETSC_ARCH = os.environ.get('PETSC_ARCH', '') from os.path import join, isdir if PETSC_ARCH and isdir(join(PETSC_DIR, PETSC_ARCH)): INCLUDE_DIRS += [join(PETSC_DIR, PETSC_ARCH, 'include'), join(PETSC_DIR, 'include')] LIBRARY_DIRS += [join(PETSC_DIR, PETSC_ARCH, 'lib')] else: if PETSC_ARCH: pass # XXX should warn ... INCLUDE_DIRS += [join(PETSC_DIR, 'include')] LIBRARY_DIRS += [join(PETSC_DIR, 'lib')] LIBRARIES += [#'petscts', 'petscsnes', 'petscksp', #'petscdm', 'petscmat', 'petscvec', 'petsc'] # PETSc for Python import petsc4py INCLUDE_DIRS += [petsc4py.get_include()] # Configuration from numpy.distutils.misc_util import Configuration config = Configuration('', parent_package, top_path) config.add_extension('Bratu3D', sources = ['Bratu3D.pyx', 'Bratu3Dimpl.c'], depends = ['Bratu3Dimpl.h'], include_dirs=INCLUDE_DIRS + [os.curdir], libraries=LIBRARIES, library_dirs=LIBRARY_DIRS, runtime_library_dirs=LIBRARY_DIRS) return config if __name__ == "__main__": from numpy.distutils.core import setup setup(**configuration(top_path='').todict()) petsc4py-3.7.0/demo/wrap-cython/makefile0000644000175000001440000000110012711377604020760 0ustar dalcinlusers00000000000000# -*- makefile -*- MPIEXEC= PYTHON=python .PHONY:test test: run clean SCRIPT=run_demo MODULE=Bratu3D .PHONY:build build: ${MODULE}.so .PHONY:run run: build ${MPIEXEC} ${PYTHON} ${SCRIPT}.py ${MODULE}.so: ${MODULE}.pyx ${MODULE}impl.h ${MODULE}impl.c CC=${CC} F90=${FC} LDSHARED='${CLINKER} -shared' \ ${PYTHON} setup.py -q build_ext --inplace ${RM} -r build ${MODULE}_wrap.c .PHONY:clean clean:: ${RM} ${MODULE}.c ${MODULE}*.so ${RM} *.py[co] ${RM} -r __pycache__ include ${PETSC_DIR}/lib/petsc/conf/variables include ${PETSC_DIR}/lib/petsc/conf/rules MPIEXEC= petsc4py-3.7.0/demo/wrap-cython/Bratu3D.pyx0000644000175000001440000000227012711377604021277 0ustar dalcinlusers00000000000000from petsc4py.PETSc cimport Vec, PetscVec from petsc4py.PETSc cimport Mat, PetscMat from petsc4py.PETSc cimport DM, PetscDM from petsc4py.PETSc cimport SNES, PetscSNES from petsc4py.PETSc import Error cdef extern from "Bratu3Dimpl.h": ctypedef struct Params: double lambda_ int FormInitGuess(PetscDM da, PetscVec x, Params *p) int FormFunction (PetscDM da, PetscVec x, PetscVec F, Params *p) int FormJacobian (PetscDM da, PetscVec x, PetscMat J, Params *p) def formInitGuess(Vec x, DM da, double lambda_): cdef int ierr cdef Params p = {"lambda_" : lambda_} ierr = FormInitGuess(da.dm, x.vec, &p) if ierr != 0: raise Error(ierr) def formFunction(SNES snes, Vec x, Vec f, DM da, double lambda_): cdef int ierr cdef Params p = {"lambda_" : lambda_} ierr = FormFunction(da.dm, x.vec, f.vec, &p) if ierr != 0: raise Error(ierr) def formJacobian(SNES snes, Vec x, Mat J, Mat P, DM da, double lambda_): cdef int ierr cdef Params p = {"lambda_" : lambda_} ierr = FormJacobian(da.dm, x.vec, P.mat, &p) if ierr != 0: raise Error(ierr) if J != P: J.assemble() # for matrix-free operator return Mat.Structure.SAME_NONZERO_PATTERN petsc4py-3.7.0/demo/wrap-cython/Bratu3Dimpl.c0000644000175000001440000002201212711377604021557 0ustar dalcinlusers00000000000000/* ------------------------------------------------------------------------ Solid Fuel Ignition (SFI) problem. This problem is modeled by the partial differential equation -Laplacian(u) - lambda * exp(u) = 0, 0 < x,y,z < 1, with boundary conditions u = 0 for x = 0, x = 1, y = 0, y = 1, z = 0, z = 1 A finite difference approximation with the usual 7-point stencil is used to discretize the boundary value problem to obtain a nonlinear system of equations. The problem is solved in a 3D rectangular domain, using distributed arrays (DAs) to partition the parallel grid. ------------------------------------------------------------------------- */ #include "Bratu3Dimpl.h" #undef __FUNCT__ #define __FUNCT__ "FormInitGuess" PetscErrorCode FormInitGuess(DM da, Vec X, Params *p) { PetscInt i,j,k,Mx,My,Mz,xs,ys,zs,xm,ym,zm; PetscReal lambda,temp1,hx,hy,hz,tempk,tempj; PetscScalar ***x; PetscErrorCode ierr; PetscFunctionBegin; ierr = DMDAGetInfo(da,PETSC_IGNORE, &Mx,&My,&Mz, PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE, PETSC_IGNORE,PETSC_IGNORE, PETSC_IGNORE,PETSC_IGNORE,PETSC_IGNORE, PETSC_IGNORE); lambda = p->lambda_; hx = 1.0/(PetscReal)(Mx-1); hy = 1.0/(PetscReal)(My-1); hz = 1.0/(PetscReal)(Mz-1); temp1 = lambda/(lambda + 1.0); /* Get a pointer to vector data. - For default PETSc vectors, VecGetArray() returns a pointer to the data array. Otherwise, the routine is implementation dependent. - You MUST call VecRestoreArray() when you no longer need access to the array. */ ierr = DMDAVecGetArray(da,X,&x);CHKERRQ(ierr); /* Get local grid boundaries (for 3-dimensional DMDA): - xs, ys, zs: starting grid indices (no ghost points) - xm, ym, zm: widths of local grid (no ghost points) */ ierr = DMDAGetCorners(da,&xs,&ys,&zs,&xm,&ym,&zm);CHKERRQ(ierr); /* Compute initial guess over the locally owned part of the grid */ for (k=zs; klambda_; hx = 1.0/(PetscReal)(Mx-1); hy = 1.0/(PetscReal)(My-1); hz = 1.0/(PetscReal)(Mz-1); sc = hx*hy*hz*lambda; hxhzdhy = hx*hz/hy; hyhzdhx = hy*hz/hx; hxhydhz = hx*hy/hz; /* */ ierr = DMGetLocalVector(da,&localX);CHKERRQ(ierr); /* Scatter ghost points to local vector,using the 2-step process DMGlobalToLocalBegin(),DMGlobalToLocalEnd(). By placing code between these two statements, computations can be done while messages are in transition. */ ierr = DMGlobalToLocalBegin(da,X,INSERT_VALUES,localX);CHKERRQ(ierr); ierr = DMGlobalToLocalEnd(da,X,INSERT_VALUES,localX);CHKERRQ(ierr); /* Get pointers to vector data. */ ierr = DMDAVecGetArray(da,localX,&x);CHKERRQ(ierr); ierr = DMDAVecGetArray(da,F,&f);CHKERRQ(ierr); /* Get local grid boundaries. */ ierr = DMDAGetCorners(da,&xs,&ys,&zs,&xm,&ym,&zm);CHKERRQ(ierr); /* Compute function over the locally owned part of the grid. */ for (k=zs; klambda_; hx = 1.0/(PetscReal)(Mx-1); hy = 1.0/(PetscReal)(My-1); hz = 1.0/(PetscReal)(Mz-1); sc = hx*hy*hz*lambda; hxhzdhy = hx*hz/hy; hyhzdhx = hy*hz/hx; hxhydhz = hx*hy/hz; /* */ ierr = DMGetLocalVector(da,&localX);CHKERRQ(ierr); /* Scatter ghost points to local vector, using the 2-step process DMGlobalToLocalBegin(), DMGlobalToLocalEnd(). By placing code between these two statements, computations can be done while messages are in transition. */ ierr = DMGlobalToLocalBegin(da,X,INSERT_VALUES,localX);CHKERRQ(ierr); ierr = DMGlobalToLocalEnd(da,X,INSERT_VALUES,localX);CHKERRQ(ierr); /* Get pointer to vector data. */ ierr = DMDAVecGetArray(da,localX,&x);CHKERRQ(ierr); /* Get local grid boundaries. */ ierr = DMDAGetCorners(da,&xs,&ys,&zs,&xm,&ym,&zm);CHKERRQ(ierr); /* Compute entries for the locally owned part of the Jacobian. - Currently, all PETSc parallel matrix formats are partitioned by contiguous chunks of rows across the processors. - Each processor needs to insert only elements that it owns locally (but any non-local elements will be sent to the appropriate processor during matrix assembly). - Here, we set all entries for a particular row at once. - We can set matrix entries either using either MatSetValuesLocal() or MatSetValues(), as discussed above. */ for (k=zs; k0 : J = I-n; A[I,J] = -1 if i0 : J = I-1; A[I,J] = -1 if j #include #include #include #include "del2mat.h" #define DEL2MAT_MULT ((void(*)(void))Del2Mat_mult) #define DEL2MAT_DIAG ((void(*)(void))Del2Mat_diag) int main(int argc,char **argv) { PetscInt n; PetscScalar h; Del2Mat shell; Mat A; Vec x,b; KSP ksp; PC pc; /* PETSc initialization */ PetscInitialize(&argc, &argv, PETSC_NULL, PETSC_NULL); /* number of nodes in each direction * excluding those at the boundary */ n = 32; h = 1.0/(n+1); /* grid spacing */ /* setup linear system (shell) matrix */ MatCreate(PETSC_COMM_SELF, &A); MatSetSizes(A, n*n*n, n*n*n, n*n*n, n*n*n); MatSetType(A, MATSHELL); shell.N = n; PetscMalloc((n+2)*(n+2)*(n+2)*sizeof(PetscScalar),&shell.F); PetscMemzero(shell.F, (n+2)*(n+2)*(n+2)*sizeof(PetscScalar)); MatShellSetContext(A, (void**)&shell); MatShellSetOperation(A, MATOP_MULT, DEL2MAT_MULT); MatShellSetOperation(A, MATOP_MULT_TRANSPOSE, DEL2MAT_MULT); MatShellSetOperation(A, MATOP_GET_DIAGONAL, DEL2MAT_DIAG); MatSetUp(A); /* setup linear system vectors */ MatCreateVecs(A, &x, &b); VecSet(x, 0); VecSet(b, 1); /* setup Krylov linear solver */ KSPCreate(PETSC_COMM_SELF, &ksp); KSPGetPC(ksp, &pc); KSPSetType(ksp, KSPCG); /* use conjugate gradients */ PCSetType(pc, PCNONE); /* with no preconditioning */ KSPSetFromOptions(ksp); /* iteratively solve linear system of equations A*x=b */ KSPSetOperators(ksp,A,A); KSPSolve(ksp, b, x); /* scale solution vector to account for grid spacing */ VecScale(x, h*h); /* free memory and destroy objects */ PetscFree(shell.F); VecDestroy(&x); VecDestroy(&b); MatDestroy(&A); KSPDestroy(&ksp); /* finalize PETSc */ PetscFinalize(); return 0; } petsc4py-3.7.0/demo/poisson3d/del2mat.h0000644000175000001440000000236412711377604020444 0ustar dalcinlusers00000000000000/* file: del2mat.h */ #ifndef DEL2MAT_H #define DEL2MAT_H #include #include #include /* external Fortran 90 subroutine */ #define Del2Apply del2apply_ extern void Del2Apply(int*,double*,const double*,double*); /* user data structure and routines * defining the matrix-free operator */ typedef struct { PetscInt N; PetscScalar *F; } Del2Mat; #undef __FUNCT__ #define __FUNCT__ "Del2Mat_mult" /* y <- A * x */ PetscErrorCode Del2Mat_mult(Mat A, Vec x, Vec y) { Del2Mat *ctx; const PetscScalar *xx; PetscScalar *yy; PetscErrorCode ierr; PetscFunctionBegin; ierr = MatShellGetContext(A,(void**)&ctx);CHKERRQ(ierr); /* get raw vector arrays */ ierr = VecGetArrayRead(x,&xx);CHKERRQ(ierr); ierr = VecGetArray(y,&yy);CHKERRQ(ierr); /* call external Fortran subroutine */ Del2Apply(&ctx->N,ctx->F,xx,yy); /* restore raw vector arrays */ ierr = VecRestoreArrayRead(x,&xx);CHKERRQ(ierr); ierr = VecRestoreArray(y,&yy);CHKERRQ(ierr); PetscFunctionReturn(0); } #undef __FUNCT__ #define __FUNCT__ "Del2Mat_diag" /*D_i <- A_ii */ PetscErrorCode Del2Mat_diag(Mat A, Vec D) { PetscErrorCode ierr; PetscFunctionBegin; ierr = VecSet(D,6.0);CHKERRQ(ierr); PetscFunctionReturn(0); } #endif petsc4py-3.7.0/demo/taosolve/0000755000175000001440000000000012711405164016642 5ustar dalcinlusers00000000000000petsc4py-3.7.0/demo/taosolve/rosenbrock.py0000644000175000001440000000706012711377604021375 0ustar dalcinlusers00000000000000""" This example demonstrates the use of TAO for Python to solve an unconstrained minimization problem on a single processor. We minimize the extended Rosenbrock function:: sum_{i=0}^{n/2-1} ( alpha*(x_{2i+1}-x_{2i}^2)^2 + (1-x_{2i})^2 ) """ try: range = xrange except NameError: pass # the two lines below are only # needed to build options database # from command line arguments import sys, petsc4py petsc4py.init(sys.argv) from petsc4py import PETSc class AppCtx(object): """ Extended Rosenbrock function. """ def __init__(self, n=2, alpha=99.0): self.size = int(n) self.alpha = float(alpha) def formObjective(self, tao, x): #print 'AppCtx.formObjective()' alpha = self.alpha nn = self.size // 2 ff = 0.0 for i in range(nn): t1 = x[2*i+1] - x[2*i] * x[2*i] t2 = 1 - x[2*i]; ff += alpha*t1*t1 + t2*t2; return ff def formGradient(self, tao, x, G): #print 'AppCtx.formGradient()' alpha = self.alpha nn = self.size // 2 G.zeroEntries() for i in range(nn): t1 = x[2*i+1] - x[2*i] * x[2*i] t2 = 1 - x[2*i]; G[2*i] = -4*alpha*t1*x[2*i] - 2*t2; G[2*i+1] = 2*alpha*t1; def formObjGrad(self, tao, x, G): #print 'AppCtx.formObjGrad()' alpha = self.alpha nn = self.size // 2 ff = 0.0 G.zeroEntries() for i in range(nn): t1 = x[2*i+1] - x[2*i] * x[2*i] t2 = 1 - x[2*i]; ff += alpha*t1*t1 + t2*t2; G[2*i] = -4*alpha*t1*x[2*i] - 2*t2; G[2*i+1] = 2*alpha*t1; return ff def formHessian(self, tao, x, H, HP): #print 'AppCtx.formHessian()' alpha = self.alpha nn = self.size // 2 idx = [0, 0] v = [[0.0, 0.0], [0.0, 0.0]] H.zeroEntries() for i in range(nn): v[1][1] = 2*alpha v[0][0] = -4*alpha*(x[2*i+1]-3*x[2*i]*x[2*i]) + 2 v[1][0] = v[0][1] = -4.0*alpha*x[2*i]; idx[0] = 2*i idx[1] = 2*i+1 H[idx,idx] = v H.assemble() # access PETSc options database OptDB = PETSc.Options() # create user application context # and configure user parameters user = AppCtx() user.size = OptDB.getInt ( 'n', user.size) user.alpha = OptDB.getReal('alpha', user.alpha) # create solution vector x = PETSc.Vec().create(PETSc.COMM_SELF) x.setSizes(user.size) x.setFromOptions() # create Hessian matrix H = PETSc.Mat().create(PETSc.COMM_SELF) H.setSizes([user.size, user.size]) H.setFromOptions() H.setOption(PETSc.Mat.Option.SYMMETRIC, True) H.setUp() # pass the following to command line: # $ ... -methods nm,lmvm,nls,ntr,cg,blmvm,tron # to try many methods methods = OptDB.getString('methods', '') methods = methods.split(',') for meth in methods: # create TAO Solver tao = PETSc.TAO().create(PETSc.COMM_SELF) if meth: tao.setType(meth) tao.setFromOptions() # solve the problem tao.setObjectiveGradient(user.formObjGrad) tao.setObjective(user.formObjective) tao.setGradient(user.formGradient) tao.setHessian(user.formHessian, H) #app.getKSP().getPC().setFromOptions() x.set(0) # zero initial guess #tao.setInitial(x) tao.solve(x) tao.destroy() ## # this is just for testing ## x = app.getSolution() ## G = app.getGradient() ## H, HP = app.getHessian() ## f = tao.computeObjective(x) ## tao.computeGradient(x, G) ## f = tao.computeObjectiveGradient(x, G) ## tao.computeHessian(x, H, HP) petsc4py-3.7.0/demo/taosolve/chwirut.py0000644000175000001440000000347512711377604020721 0ustar dalcinlusers00000000000000import sys, petsc4py petsc4py.init(sys.argv) import numpy as np from petsc4py import PETSc class Chwirut(object): """ Finds the nonlinear least-squares solution to the model y = exp(-b1*x)/(b2+b3*x) + e """ def __init__(self): BETA = [0.2, 0.12, 0.08] NOBSERVATIONS = 100 NPARAMETERS = 3 np.random.seed(456) x = np.random.rand(NOBSERVATIONS) e = np.random.rand(NOBSERVATIONS) y = np.exp(-BETA[0]*x)/(BETA[1] + BETA[2]*x) + e self.NOBSERVATIONS = NOBSERVATIONS self.NPARAMETERS = NPARAMETERS self.x = x self.y = y def createVecs(self): X = PETSc.Vec().create(PETSc.COMM_SELF) X.setSizes(self.NPARAMETERS) F = PETSc.Vec().create(PETSc.COMM_SELF) F.setSizes(self.NOBSERVATIONS) return X, F def formInitialGuess(self, X): X[0] = 0.15 X[1] = 0.08 X[2] = 0.05 def formObjective(self, tao, X, F): x, y = self.x, self.y b1, b2, b3 = X.array F.array = y - np.exp(-b1*x)/(b2 + b3*x) def plotSolution(self, X): try: from matplotlib import pylab except ImportError: return b1, b2, b3 = X.array x, y = self.x, self.y u = np.linspace(x.min(), x.max(), 100) v = np.exp(-b1*u)/(b2+b3*u) pylab.plot(x, y, 'ro') pylab.plot(u, v, 'b-') pylab.show() OptDB = PETSc.Options() user = Chwirut() x, f = user.createVecs() x.setFromOptions() f.setFromOptions() tao = PETSc.TAO().create(PETSc.COMM_SELF) tao.setType(PETSc.TAO.Type.POUNDERS) tao.setSeparableObjective(user.formObjective, f) tao.setFromOptions() user.formInitialGuess(x) tao.solve(x) plot = OptDB.getBool('plot', False) if plot: user.plotSolution(x) x.destroy() f.destroy() tao.destroy() petsc4py-3.7.0/MANIFEST.in0000644000175000001440000000076012711377604015632 0ustar dalcinlusers00000000000000include setup*.py *.cfg *.rst recursive-include demo [M,m]akefile* *.py *.pyx *.i *.[hc] recursive-include demo .f2py_f2cmap *.pyf *.[fF]90 recursive-include conf *.py *.cfg recursive-include src *.py *.pyx *.px[di] *.h *.c *.i *.cfg recursive-include test *.py recursive-include * [M,m]akefile include docs/*.html include docs/*.pdf include docs/*.info include docs/*.[137] include docs/*.rst recursive-include docs/usrman * recursive-include docs/apiref * recursive-include docs/source *
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