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python: 3.5
sudo: required
dist: trusty
services: docker
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install:
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swiglpk-1.4.4/LICENSE 0000664 0000000 0000000 00000104512 13142412132 0014201 0 ustar 00root root 0000000 0000000 GNU GENERAL PUBLIC LICENSE
Version 3, 29 June 2007
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GNU General Public License, you may choose any version ever published
by the Free Software Foundation.
If the Program specifies that a proxy can decide which future
versions of the GNU General Public License can be used, that proxy's
public statement of acceptance of a version permanently authorizes you
to choose that version for the Program.
Later license versions may give you additional or different
permissions. However, no additional obligations are imposed on any
author or copyright holder as a result of your choosing to follow a
later version.
15. Disclaimer of Warranty.
THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY
APPLICABLE LAW. EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT
HOLDERS AND/OR OTHER PARTIES PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY
OF ANY KIND, EITHER EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO,
THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
PURPOSE. THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM
IS WITH YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF
ALL NECESSARY SERVICING, REPAIR OR CORRECTION.
16. Limitation of Liability.
IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING
WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS
THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY
GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE
USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF
DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD
PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS),
EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF
SUCH DAMAGES.
17. Interpretation of Sections 15 and 16.
If the disclaimer of warranty and limitation of liability provided
above cannot be given local legal effect according to their terms,
reviewing courts shall apply local law that most closely approximates
an absolute waiver of all civil liability in connection with the
Program, unless a warranty or assumption of liability accompanies a
copy of the Program in return for a fee.
END OF TERMS AND CONDITIONS
How to Apply These Terms to Your New Programs
If you develop a new program, and you want it to be of the greatest
possible use to the public, the best way to achieve this is to make it
free software which everyone can redistribute and change under these terms.
To do so, attach the following notices to the program. It is safest
to attach them to the start of each source file to most effectively
state the exclusion of warranty; and each file should have at least
the "copyright" line and a pointer to where the full notice is found.
Copyright (C)
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see .
Also add information on how to contact you by electronic and paper mail.
If the program does terminal interaction, make it output a short
notice like this when it starts in an interactive mode:
Copyright (C)
This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
This is free software, and you are welcome to redistribute it
under certain conditions; type `show c' for details.
The hypothetical commands `show w' and `show c' should show the appropriate
parts of the General Public License. Of course, your program's commands
might be different; for a GUI interface, you would use an "about box".
You should also get your employer (if you work as a programmer) or school,
if any, to sign a "copyright disclaimer" for the program, if necessary.
For more information on this, and how to apply and follow the GNU GPL, see
.
The GNU General Public License does not permit incorporating your program
into proprietary programs. If your program is a subroutine library, you
may consider it more useful to permit linking proprietary applications with
the library. If this is what you want to do, use the GNU Lesser General
Public License instead of this License. But first, please read
. swiglpk-1.4.4/MANIFEST.in 0000664 0000000 0000000 00000000074 13142412132 0014730 0 ustar 00root root 0000000 0000000 include README.rst
include versioneer.py
include _version.py swiglpk-1.4.4/README.rst 0000664 0000000 0000000 00000011265 13142412132 0014665 0 ustar 00root root 0000000 0000000 swiglpk
=======
*Plain python bindings for the GNU Linear Programming Kit (GLPK)*
|PyPI| |License| |Build Status| |AppVeyor Status|
Why?
~~~~
*swiglpk* is not a high-level wrapper for GLPK (take a look at
`optlang `__ if you are
interested in a python-based mathematical programming language). It just
provides plain vanilla `swig `__ bindings to the
underlying C library. In constrast to other GLPK wrappers for python
(e.g. `PyGLPK `__,
`Python-GLPK `__,
`ctypes-glpk `__,
`ecyglpki `__ etc.) it is fairly
version agnostic: it will try to guess the location of the glpk.h header
file (using ``which glpsol``) and then compile the extension for your
particular GLPK installation.
Please show us some love by staring this repo if you find swiglpk useful!
Installation
~~~~~~~~~~~~
::
pip install swiglpk
That's it. swiglpk comes with binary wheels for Windows, Mac, and Linux. No installation of third-party dependencies necessary.
Example
~~~~~~~
Running the following (slightly adapted) example from the `GLPK
manual `__ ...
::
from swiglpk import *
ia = intArray(1+1000); ja = intArray(1+1000);
ar = doubleArray(1+1000);
lp = glp_create_prob();
glp_set_prob_name(lp, "sample");
glp_set_obj_dir(lp, GLP_MAX);
glp_add_rows(lp, 3);
glp_set_row_name(lp, 1, "p");
glp_set_row_bnds(lp, 1, GLP_UP, 0.0, 100.0);
glp_set_row_name(lp, 2, "q");
glp_set_row_bnds(lp, 2, GLP_UP, 0.0, 600.0);
glp_set_row_name(lp, 3, "r");
glp_set_row_bnds(lp, 3, GLP_UP, 0.0, 300.0);
glp_add_cols(lp, 3);
glp_set_col_name(lp, 1, "x1");
glp_set_col_bnds(lp, 1, GLP_LO, 0.0, 0.0);
glp_set_obj_coef(lp, 1, 10.0);
glp_set_col_name(lp, 2, "x2");
glp_set_col_bnds(lp, 2, GLP_LO, 0.0, 0.0);
glp_set_obj_coef(lp, 2, 6.0);
glp_set_col_name(lp, 3, "x3");
glp_set_col_bnds(lp, 3, GLP_LO, 0.0, 0.0);
glp_set_obj_coef(lp, 3, 4.0);
ia[1] = 1; ja[1] = 1; ar[1] = 1.0; # a[1,1] = 1
ia[2] = 1; ja[2] = 2; ar[2] = 1.0; # a[1,2] = 1
ia[3] = 1; ja[3] = 3; ar[3] = 1.0; # a[1,3] = 1
ia[4] = 2; ja[4] = 1; ar[4] = 10.0; # a[2,1] = 10
ia[5] = 3; ja[5] = 1; ar[5] = 2.0; # a[3,1] = 2
ia[6] = 2; ja[6] = 2; ar[6] = 4.0; # a[2,2] = 4
ia[7] = 3; ja[7] = 2; ar[7] = 2.0; # a[3,2] = 2
ia[8] = 2; ja[8] = 3; ar[8] = 5.0; # a[2,3] = 5
ia[9] = 3; ja[9] = 3; ar[9] = 6.0; # a[3,3] = 6
glp_load_matrix(lp, 9, ia, ja, ar);
glp_simplex(lp, None);
Z = glp_get_obj_val(lp);
x1 = glp_get_col_prim(lp, 1);
x2 = glp_get_col_prim(lp, 2);
x3 = glp_get_col_prim(lp, 3);
print("\nZ = %g; x1 = %g; x2 = %g; x3 = %g\n" % (Z, x1, x2, x3))
glp_delete_prob(lp);
... will produce the following output (the example can also be found at
examples/example.py):
::
GLPK Simplex Optimizer, v4.52
3 rows, 3 columns, 9 non-zeros
* 0: obj = 0.000000000e+00 infeas = 0.000e+00 (0)
* 2: obj = 7.333333333e+02 infeas = 0.000e+00 (0)
OPTIMAL LP SOLUTION FOUND
Z = 733.333; x1 = 33.3333; x2 = 66.6667; x3 = 0
Pretty ugly right? Consider using `optlang `__ for formulating and solving your optimization problems.
Documentation
~~~~~~~~~~~~~
You can find documentation on GLPK's C API `here `__
Development
~~~~~~~~~~~
You still want to install it from source? Then you'll need to install the following
dependencies first.
- GLPK
- swig
If you're on OS X, swig and GLPK can easily be installed with
`homebrew `__.
::
brew install swig glpk
If you're using ubuntu linux, you can install swig and GLPK using
``apt-get``.
::
apt-get install glpk-utils libglpk-dev swig
If you're on Windows, you are on your own (checkout the `appveyor.yml `_ config file for directions).
Then clone the repo and run the following.
::
python setup.py install
.. |PyPI| image:: https://img.shields.io/pypi/v/swiglpk.svg
:target: https://pypi.python.org/pypi/swiglpk
.. |License| image:: https://img.shields.io/badge/License-GPL%20v3-blue.svg
:target: http://www.gnu.org/licenses/gpl-3.0
.. |Build Status| image:: https://travis-ci.org/biosustain/swiglpk.svg?branch=master
:target: https://travis-ci.org/biosustain/swiglpk
.. |AppVeyor Status| image:: https://ci.appveyor.com/api/projects/status/mhj0r133kx7wy908/branch/master?svg=true
:target: https://ci.appveyor.com/project/phantomas1234/swiglpk/branch/master
swiglpk-1.4.4/_version.py 0000664 0000000 0000000 00000036676 13142412132 0015411 0 ustar 00root root 0000000 0000000
# This file helps to compute a version number in source trees obtained from
# git-archive tarball (such as those provided by githubs download-from-tag
# feature). Distribution tarballs (built by setup.py sdist) and build
# directories (produced by setup.py build) will contain a much shorter file
# that just contains the computed version number.
# This file is released into the public domain. Generated by
# versioneer-0.15 (https://github.com/warner/python-versioneer)
import errno
import os
import re
import subprocess
import sys
def get_keywords():
# these strings will be replaced by git during git-archive.
# setup.py/versioneer.py will grep for the variable names, so they must
# each be defined on a line of their own. _version.py will just call
# get_keywords().
git_refnames = " (HEAD -> master, tag: 1.4.4)"
git_full = "44e2987c9aa6ac35bb32a564504b899d0ec41ec9"
keywords = {"refnames": git_refnames, "full": git_full}
return keywords
class VersioneerConfig:
pass
def get_config():
# these strings are filled in when 'setup.py versioneer' creates
# _version.py
cfg = VersioneerConfig()
cfg.VCS = "git"
cfg.style = "pep440"
cfg.tag_prefix = ""
cfg.parentdir_prefix = "myproject-"
cfg.versionfile_source = "_version.py"
cfg.verbose = False
return cfg
class NotThisMethod(Exception):
pass
LONG_VERSION_PY = {}
HANDLERS = {}
def register_vcs_handler(vcs, method): # decorator
def decorate(f):
if vcs not in HANDLERS:
HANDLERS[vcs] = {}
HANDLERS[vcs][method] = f
return f
return decorate
def run_command(commands, args, cwd=None, verbose=False, hide_stderr=False):
assert isinstance(commands, list)
p = None
for c in commands:
try:
dispcmd = str([c] + args)
# remember shell=False, so use git.cmd on windows, not just git
p = subprocess.Popen([c] + args, cwd=cwd, stdout=subprocess.PIPE,
stderr=(subprocess.PIPE if hide_stderr
else None))
break
except EnvironmentError:
e = sys.exc_info()[1]
if e.errno == errno.ENOENT:
continue
if verbose:
print("unable to run %s" % dispcmd)
print(e)
return None
else:
if verbose:
print("unable to find command, tried %s" % (commands,))
return None
stdout = p.communicate()[0].strip()
if sys.version_info[0] >= 3:
stdout = stdout.decode()
if p.returncode != 0:
if verbose:
print("unable to run %s (error)" % dispcmd)
return None
return stdout
def versions_from_parentdir(parentdir_prefix, root, verbose):
# Source tarballs conventionally unpack into a directory that includes
# both the project name and a version string.
dirname = os.path.basename(root)
if not dirname.startswith(parentdir_prefix):
if verbose:
print("guessing rootdir is '%s', but '%s' doesn't start with "
"prefix '%s'" % (root, dirname, parentdir_prefix))
raise NotThisMethod("rootdir doesn't start with parentdir_prefix")
return {"version": dirname[len(parentdir_prefix):],
"full-revisionid": None,
"dirty": False, "error": None}
@register_vcs_handler("git", "get_keywords")
def git_get_keywords(versionfile_abs):
# the code embedded in _version.py can just fetch the value of these
# keywords. When used from setup.py, we don't want to import _version.py,
# so we do it with a regexp instead. This function is not used from
# _version.py.
keywords = {}
try:
f = open(versionfile_abs, "r")
for line in f.readlines():
if line.strip().startswith("git_refnames ="):
mo = re.search(r'=\s*"(.*)"', line)
if mo:
keywords["refnames"] = mo.group(1)
if line.strip().startswith("git_full ="):
mo = re.search(r'=\s*"(.*)"', line)
if mo:
keywords["full"] = mo.group(1)
f.close()
except EnvironmentError:
pass
return keywords
@register_vcs_handler("git", "keywords")
def git_versions_from_keywords(keywords, tag_prefix, verbose):
if not keywords:
raise NotThisMethod("no keywords at all, weird")
refnames = keywords["refnames"].strip()
if refnames.startswith("$Format"):
if verbose:
print("keywords are unexpanded, not using")
raise NotThisMethod("unexpanded keywords, not a git-archive tarball")
refs = set([r.strip() for r in refnames.strip("()").split(",")])
# starting in git-1.8.3, tags are listed as "tag: foo-1.0" instead of
# just "foo-1.0". If we see a "tag: " prefix, prefer those.
TAG = "tag: "
tags = set([r[len(TAG):] for r in refs if r.startswith(TAG)])
if not tags:
# Either we're using git < 1.8.3, or there really are no tags. We use
# a heuristic: assume all version tags have a digit. The old git %d
# expansion behaves like git log --decorate=short and strips out the
# refs/heads/ and refs/tags/ prefixes that would let us distinguish
# between branches and tags. By ignoring refnames without digits, we
# filter out many common branch names like "release" and
# "stabilization", as well as "HEAD" and "master".
tags = set([r for r in refs if re.search(r'\d', r)])
if verbose:
print("discarding '%s', no digits" % ",".join(refs-tags))
if verbose:
print("likely tags: %s" % ",".join(sorted(tags)))
for ref in sorted(tags):
# sorting will prefer e.g. "2.0" over "2.0rc1"
if ref.startswith(tag_prefix):
r = ref[len(tag_prefix):]
if verbose:
print("picking %s" % r)
return {"version": r,
"full-revisionid": keywords["full"].strip(),
"dirty": False, "error": None
}
# no suitable tags, so version is "0+unknown", but full hex is still there
if verbose:
print("no suitable tags, using unknown + full revision id")
return {"version": "0+unknown",
"full-revisionid": keywords["full"].strip(),
"dirty": False, "error": "no suitable tags"}
@register_vcs_handler("git", "pieces_from_vcs")
def git_pieces_from_vcs(tag_prefix, root, verbose, run_command=run_command):
# this runs 'git' from the root of the source tree. This only gets called
# if the git-archive 'subst' keywords were *not* expanded, and
# _version.py hasn't already been rewritten with a short version string,
# meaning we're inside a checked out source tree.
if not os.path.exists(os.path.join(root, ".git")):
if verbose:
print("no .git in %s" % root)
raise NotThisMethod("no .git directory")
GITS = ["git"]
if sys.platform == "win32":
GITS = ["git.cmd", "git.exe"]
# if there is a tag, this yields TAG-NUM-gHEX[-dirty]
# if there are no tags, this yields HEX[-dirty] (no NUM)
describe_out = run_command(GITS, ["describe", "--tags", "--dirty",
"--always", "--long"],
cwd=root)
# --long was added in git-1.5.5
if describe_out is None:
raise NotThisMethod("'git describe' failed")
describe_out = describe_out.strip()
full_out = run_command(GITS, ["rev-parse", "HEAD"], cwd=root)
if full_out is None:
raise NotThisMethod("'git rev-parse' failed")
full_out = full_out.strip()
pieces = {}
pieces["long"] = full_out
pieces["short"] = full_out[:7] # maybe improved later
pieces["error"] = None
# parse describe_out. It will be like TAG-NUM-gHEX[-dirty] or HEX[-dirty]
# TAG might have hyphens.
git_describe = describe_out
# look for -dirty suffix
dirty = git_describe.endswith("-dirty")
pieces["dirty"] = dirty
if dirty:
git_describe = git_describe[:git_describe.rindex("-dirty")]
# now we have TAG-NUM-gHEX or HEX
if "-" in git_describe:
# TAG-NUM-gHEX
mo = re.search(r'^(.+)-(\d+)-g([0-9a-f]+)$', git_describe)
if not mo:
# unparseable. Maybe git-describe is misbehaving?
pieces["error"] = ("unable to parse git-describe output: '%s'"
% describe_out)
return pieces
# tag
full_tag = mo.group(1)
if not full_tag.startswith(tag_prefix):
if verbose:
fmt = "tag '%s' doesn't start with prefix '%s'"
print(fmt % (full_tag, tag_prefix))
pieces["error"] = ("tag '%s' doesn't start with prefix '%s'"
% (full_tag, tag_prefix))
return pieces
pieces["closest-tag"] = full_tag[len(tag_prefix):]
# distance: number of commits since tag
pieces["distance"] = int(mo.group(2))
# commit: short hex revision ID
pieces["short"] = mo.group(3)
else:
# HEX: no tags
pieces["closest-tag"] = None
count_out = run_command(GITS, ["rev-list", "HEAD", "--count"],
cwd=root)
pieces["distance"] = int(count_out) # total number of commits
return pieces
def plus_or_dot(pieces):
if "+" in pieces.get("closest-tag", ""):
return "."
return "+"
def render_pep440(pieces):
# now build up version string, with post-release "local version
# identifier". Our goal: TAG[+DISTANCE.gHEX[.dirty]] . Note that if you
# get a tagged build and then dirty it, you'll get TAG+0.gHEX.dirty
# exceptions:
# 1: no tags. git_describe was just HEX. 0+untagged.DISTANCE.gHEX[.dirty]
if pieces["closest-tag"]:
rendered = pieces["closest-tag"]
if pieces["distance"] or pieces["dirty"]:
rendered += plus_or_dot(pieces)
rendered += "%d.g%s" % (pieces["distance"], pieces["short"])
if pieces["dirty"]:
rendered += ".dirty"
else:
# exception #1
rendered = "0+untagged.%d.g%s" % (pieces["distance"],
pieces["short"])
if pieces["dirty"]:
rendered += ".dirty"
return rendered
def render_pep440_pre(pieces):
# TAG[.post.devDISTANCE] . No -dirty
# exceptions:
# 1: no tags. 0.post.devDISTANCE
if pieces["closest-tag"]:
rendered = pieces["closest-tag"]
if pieces["distance"]:
rendered += ".post.dev%d" % pieces["distance"]
else:
# exception #1
rendered = "0.post.dev%d" % pieces["distance"]
return rendered
def render_pep440_post(pieces):
# TAG[.postDISTANCE[.dev0]+gHEX] . The ".dev0" means dirty. Note that
# .dev0 sorts backwards (a dirty tree will appear "older" than the
# corresponding clean one), but you shouldn't be releasing software with
# -dirty anyways.
# exceptions:
# 1: no tags. 0.postDISTANCE[.dev0]
if pieces["closest-tag"]:
rendered = pieces["closest-tag"]
if pieces["distance"] or pieces["dirty"]:
rendered += ".post%d" % pieces["distance"]
if pieces["dirty"]:
rendered += ".dev0"
rendered += plus_or_dot(pieces)
rendered += "g%s" % pieces["short"]
else:
# exception #1
rendered = "0.post%d" % pieces["distance"]
if pieces["dirty"]:
rendered += ".dev0"
rendered += "+g%s" % pieces["short"]
return rendered
def render_pep440_old(pieces):
# TAG[.postDISTANCE[.dev0]] . The ".dev0" means dirty.
# exceptions:
# 1: no tags. 0.postDISTANCE[.dev0]
if pieces["closest-tag"]:
rendered = pieces["closest-tag"]
if pieces["distance"] or pieces["dirty"]:
rendered += ".post%d" % pieces["distance"]
if pieces["dirty"]:
rendered += ".dev0"
else:
# exception #1
rendered = "0.post%d" % pieces["distance"]
if pieces["dirty"]:
rendered += ".dev0"
return rendered
def render_git_describe(pieces):
# TAG[-DISTANCE-gHEX][-dirty], like 'git describe --tags --dirty
# --always'
# exceptions:
# 1: no tags. HEX[-dirty] (note: no 'g' prefix)
if pieces["closest-tag"]:
rendered = pieces["closest-tag"]
if pieces["distance"]:
rendered += "-%d-g%s" % (pieces["distance"], pieces["short"])
else:
# exception #1
rendered = pieces["short"]
if pieces["dirty"]:
rendered += "-dirty"
return rendered
def render_git_describe_long(pieces):
# TAG-DISTANCE-gHEX[-dirty], like 'git describe --tags --dirty
# --always -long'. The distance/hash is unconditional.
# exceptions:
# 1: no tags. HEX[-dirty] (note: no 'g' prefix)
if pieces["closest-tag"]:
rendered = pieces["closest-tag"]
rendered += "-%d-g%s" % (pieces["distance"], pieces["short"])
else:
# exception #1
rendered = pieces["short"]
if pieces["dirty"]:
rendered += "-dirty"
return rendered
def render(pieces, style):
if pieces["error"]:
return {"version": "unknown",
"full-revisionid": pieces.get("long"),
"dirty": None,
"error": pieces["error"]}
if not style or style == "default":
style = "pep440" # the default
if style == "pep440":
rendered = render_pep440(pieces)
elif style == "pep440-pre":
rendered = render_pep440_pre(pieces)
elif style == "pep440-post":
rendered = render_pep440_post(pieces)
elif style == "pep440-old":
rendered = render_pep440_old(pieces)
elif style == "git-describe":
rendered = render_git_describe(pieces)
elif style == "git-describe-long":
rendered = render_git_describe_long(pieces)
else:
raise ValueError("unknown style '%s'" % style)
return {"version": rendered, "full-revisionid": pieces["long"],
"dirty": pieces["dirty"], "error": None}
def get_versions():
# I am in _version.py, which lives at ROOT/VERSIONFILE_SOURCE. If we have
# __file__, we can work backwards from there to the root. Some
# py2exe/bbfreeze/non-CPython implementations don't do __file__, in which
# case we can only use expanded keywords.
cfg = get_config()
verbose = cfg.verbose
try:
return git_versions_from_keywords(get_keywords(), cfg.tag_prefix,
verbose)
except NotThisMethod:
pass
try:
root = os.path.realpath(__file__)
# versionfile_source is the relative path from the top of the source
# tree (where the .git directory might live) to this file. Invert
# this to find the root from __file__.
for i in cfg.versionfile_source.split('/'):
root = os.path.dirname(root)
except NameError:
return {"version": "0+unknown", "full-revisionid": None,
"dirty": None,
"error": "unable to find root of source tree"}
try:
pieces = git_pieces_from_vcs(cfg.tag_prefix, root, verbose)
return render(pieces, cfg.style)
except NotThisMethod:
pass
try:
if cfg.parentdir_prefix:
return versions_from_parentdir(cfg.parentdir_prefix, root, verbose)
except NotThisMethod:
pass
return {"version": "0+unknown", "full-revisionid": None,
"dirty": None,
"error": "unable to compute version"}
swiglpk-1.4.4/appveyor.yml 0000664 0000000 0000000 00000010623 13142412132 0015563 0 ustar 00root root 0000000 0000000 branches:
only:
- master
- devel
- /^[0-9]+\.[0-9]+\.[0-9]+[.0-9ab]*$/
environment:
global:
# SDK v7.0 MSVC Express 2008's SetEnv.cmd script will fail if the
# /E:ON and /V:ON options are not enabled in the batch script intepreter
# See: http://stackoverflow.com/a/13751649/163740
CMD_IN_ENV: "cmd /E:ON /V:ON /C .\\appveyor\\run_with_env.cmd"
SWIG_VERSION: "3.0.12"
matrix:
# Python 2.7.10 is the latest version and is not pre-installed.
- PYTHON: "C:\\Python27.10"
PYTHON_VERSION: "2.7.10"
PYTHON_ARCH: "32"
- PYTHON: "C:\\Python27.10-x64"
PYTHON_VERSION: "2.7.10"
PYTHON_ARCH: "64"
# Pre-installed Python versions, which Appveyor may upgrade to
# a later point release.
# See: http://www.appveyor.com/docs/installed-software#python
- PYTHON: "C:\\Python27"
PYTHON_VERSION: "2.7.x" # currently 2.7.9
PYTHON_ARCH: "32"
- PYTHON: "C:\\Python27-x64"
PYTHON_VERSION: "2.7.x" # currently 2.7.9
PYTHON_ARCH: "64"
- PYTHON: "C:\\Python33"
PYTHON_VERSION: "3.3.x" # currently 3.3.5
PYTHON_ARCH: "32"
- PYTHON: "C:\\Python33-x64"
PYTHON_VERSION: "3.3.x" # currently 3.3.5
PYTHON_ARCH: "64"
- PYTHON: "C:\\Python34"
PYTHON_VERSION: "3.4.x" # currently 3.4.3
PYTHON_ARCH: "32"
- PYTHON: "C:\\Python34-x64"
PYTHON_VERSION: "3.4.x" # currently 3.4.3
PYTHON_ARCH: "64"
# Python versions not pre-installed
- PYTHON: "C:\\Python35"
PYTHON_VERSION: "3.5.0"
PYTHON_ARCH: "32"
- PYTHON: "C:\\Python35-x64"
PYTHON_VERSION: "3.5.0"
PYTHON_ARCH: "64"
- PYTHON: "C:\\Python36"
PYTHON_VERSION: "3.6.0"
PYTHON_ARCH: "32"
- PYTHON: "C:\\Python36-x64"
PYTHON_VERSION: "3.6.0"
PYTHON_ARCH: "64"
password:
secure: fAEJDjlDCADoXUIYv64Ufdvta6dvRrj2c6NIgObi3No=
init:
- "ECHO %PYTHON% %PYTHON_VERSION% %PYTHON_ARCH%"
install:
# If there is a newer build queued for the same PR, cancel this one.
# The AppVeyor 'rollout builds' option is supposed to serve the same
# purpose but it is problematic because it tends to cancel builds pushed
# directly to master instead of just PR builds (or the converse).
# credits: JuliaLang developers.
- ps: if ($env:APPVEYOR_PULL_REQUEST_NUMBER -and $env:APPVEYOR_BUILD_NUMBER -ne ((Invoke-RestMethod `
https://ci.appveyor.com/api/projects/$env:APPVEYOR_ACCOUNT_NAME/$env:APPVEYOR_PROJECT_SLUG/history?recordsNumber=50).builds | `
Where-Object pullRequestId -eq $env:APPVEYOR_PULL_REQUEST_NUMBER)[0].buildNumber) { `
throw "There are newer queued builds for this pull request, failing early." }
- ECHO "Filesystem root:"
- ps: "ls \"C:/\""
- ECHO "Installed SDKs:"
- ps: "ls \"C:/Program Files/Microsoft SDKs/Windows\""
# Install Python (from the official .msi of http://python.org) and pip when
# not already installed.
- ps: if (-not(Test-Path($env:PYTHON))) { & appveyor\install.ps1 }
# Prepend newly installed Python to the PATH of this build (this cannot be
# done from inside the powershell script as it would require to restart
# the parent CMD process).
- "SET PATH=%PYTHON%;%PYTHON%\\Scripts;%PATH%"
# Check that we have the expected version and architecture for Python
- "python --version"
- "python -c \"import struct; print(struct.calcsize('P') * 8)\""
# Upgrade to the latest version of pip to avoid it displaying warnings
# about it being out of date.
- "pip install --disable-pip-version-check --user --upgrade pip"
- "powershell appveyor\\install.ps1"
# Use newer version of swig
- "7z x appveyor\\swigwin-%SWIG_VERSION%.zip"
- "SET PATH=swigwin-%SWIG_VERSION%;%PATH%"
- "%PYTHON%/python -m pip install pip setuptools>=34.0 nose twine wheel --upgrade"
- "%CMD_IN_ENV% %PYTHON%/python appveyor/build_glpk.py"
- "%CMD_IN_ENV% python setup.py install"
build: off
test_script:
- "mkdir testdir"
- "copy test_swiglpk.py testdir\\test_swiglpk.py"
- "dir"
- "cd testdir"
- "dir"
- "%PYTHON%\\python -m nose -v"
- "cd .."
- "dir"
after_test:
- "%CMD_IN_ENV% python setup.py bdist_wheel"
- "%CMD_IN_ENV% python setup.py bdist_wininst"
- ps: "ls dist"
artifacts:
- path: dist\*
deploy_script:
- ps: >-
if($env:appveyor_repo_tag -eq 'True') {
Invoke-Expression "$env:PYTHON/Scripts/twine upload dist/* --username Nikolaus.Sonnenschein --password $env:password"
}
swiglpk-1.4.4/appveyor/ 0000775 0000000 0000000 00000000000 13142412132 0015036 5 ustar 00root root 0000000 0000000 swiglpk-1.4.4/appveyor/build_glpk.py 0000664 0000000 0000000 00000003413 13142412132 0017525 0 ustar 00root root 0000000 0000000 # taken from https://github.com/opencobra/cobrapy/blob/devel/appveyor/build_glpk.py
import os
import sys
import hashlib
import tarfile
import struct
import shutil
import setuptools.msvc
try:
import urllib2
except ImportError: # python 3
import urllib.request as urllib2
# these need to be set to the latest glpk version
glpk_version = "4.60"
glpk_md5 = "eda7965907f6919ffc69801646f13c3e"
glpk_build_dir = "glpk_build/glpk-%s" % glpk_version
url = "http://ftp.gnu.org/gnu/glpk/glpk-%s.tar.gz" % glpk_version
bitness = struct.calcsize("P") * 8
def md5(fname):
hash = hashlib.md5()
with open(fname, "rb") as f:
for chunk in iter(lambda: f.read(4096), b""):
hash.update(chunk)
return hash.hexdigest()
def get_vcvarsall_cmd():
py_ver = sys.version_info
if py_ver.major == 3 and py_ver.minor >= 5:
vc_ver = 14
elif py_ver.major == 3 and py_ver.minor >= 3:
vc_ver = 10
else:
vc_ver = 9
vc_path = setuptools.msvc.msvc9_find_vcvarsall(vc_ver)
assert vc_path is not None
return '"%s" %s' % (vc_path, " amd64" if bitness == 64 else "")
if not os.path.isdir("glpk_build/"):
os.mkdir("glpk_build")
if not os.path.isdir(glpk_build_dir):
response = urllib2.urlopen(url)
with open("glpk-download.tar.gz", "wb") as outfile:
outfile.write(response.read())
assert md5("glpk-download.tar.gz") == glpk_md5
with tarfile.open("glpk-download.tar.gz") as infile:
infile.extractall("glpk_build")
os.chdir("%s/w%d" % (glpk_build_dir, bitness))
if not os.path.isfile("glpk.lib"):
shutil.copy2("config_VC", "config.h")
os.system(get_vcvarsall_cmd() + "& nmake /f Makefile_VC")
shutil.copy2("glpk.lib", "../../..")
os.chdir("../../..")
shutil.copy2(glpk_build_dir + "/src/glpk.h", ".")
swiglpk-1.4.4/appveyor/deploy_to_pypi.ps1 0000664 0000000 0000000 00000000433 13142412132 0020522 0 ustar 00root root 0000000 0000000 if($env:appveyor_repo_tag -eq 'True') {
"echo [pypi] > %USERPROFILE%\\.pypirc"
"echo username: Nikolaus.Sonnenschein >> %USERPROFILE%\\.pypirc"
"echo password: %password% >> %USERPROFILE%\\.pypirc"
"%WITH_COMPILER% %PYTHON%/python setup.py bdist_wheel sdist upload"
} swiglpk-1.4.4/appveyor/install.ps1 0000664 0000000 0000000 00000016032 13142412132 0017133 0 ustar 00root root 0000000 0000000 # Sample script to install Python and pip under Windows
# Authors: Olivier Grisel, Jonathan Helmus, Kyle Kastner, and Alex Willmer
# License: CC0 1.0 Universal: http://creativecommons.org/publicdomain/zero/1.0/
$MINICONDA_URL = "http://repo.continuum.io/miniconda/"
$BASE_URL = "https://www.python.org/ftp/python/"
$GET_PIP_URL = "https://bootstrap.pypa.io/get-pip.py"
$GET_PIP_PATH = "C:\get-pip.py"
$PYTHON_PRERELEASE_REGEX = @"
(?x)
(?\d+)
\.
(?\d+)
\.
(?\d+)
(?[a-z]{1,2}\d+)
"@
function Download ($filename, $url) {
$webclient = New-Object System.Net.WebClient
$basedir = $pwd.Path + "\"
$filepath = $basedir + $filename
if (Test-Path $filename) {
Write-Host "Reusing" $filepath
return $filepath
}
# Download and retry up to 3 times in case of network transient errors.
Write-Host "Downloading" $filename "from" $url
$retry_attempts = 2
for ($i = 0; $i -lt $retry_attempts; $i++) {
try {
$webclient.DownloadFile($url, $filepath)
break
}
Catch [Exception]{
Start-Sleep 1
}
}
if (Test-Path $filepath) {
Write-Host "File saved at" $filepath
} else {
# Retry once to get the error message if any at the last try
$webclient.DownloadFile($url, $filepath)
}
return $filepath
}
function ParsePythonVersion ($python_version) {
if ($python_version -match $PYTHON_PRERELEASE_REGEX) {
return ([int]$matches.major, [int]$matches.minor, [int]$matches.micro,
$matches.prerelease)
}
$version_obj = [version]$python_version
return ($version_obj.major, $version_obj.minor, $version_obj.build, "")
}
function DownloadPython ($python_version, $platform_suffix) {
$major, $minor, $micro, $prerelease = ParsePythonVersion $python_version
if (($major -le 2 -and $micro -eq 0) `
-or ($major -eq 3 -and $minor -le 2 -and $micro -eq 0) `
) {
$dir = "$major.$minor"
$python_version = "$major.$minor$prerelease"
} else {
$dir = "$major.$minor.$micro"
}
if ($prerelease) {
if (($major -le 2) `
-or ($major -eq 3 -and $minor -eq 1) `
-or ($major -eq 3 -and $minor -eq 2) `
-or ($major -eq 3 -and $minor -eq 3) `
) {
$dir = "$dir/prev"
}
}
if (($major -le 2) -or ($major -le 3 -and $minor -le 4)) {
$ext = "msi"
if ($platform_suffix) {
$platform_suffix = ".$platform_suffix"
}
} else {
$ext = "exe"
if ($platform_suffix) {
$platform_suffix = "-$platform_suffix"
}
}
$filename = "python-$python_version$platform_suffix.$ext"
$url = "$BASE_URL$dir/$filename"
$filepath = Download $filename $url
return $filepath
}
function InstallPython ($python_version, $architecture, $python_home) {
Write-Host "Installing Python" $python_version "for" $architecture "bit architecture to" $python_home
if (Test-Path $python_home) {
Write-Host $python_home "already exists, skipping."
return $false
}
if ($architecture -eq "32") {
$platform_suffix = ""
} else {
$platform_suffix = "amd64"
}
$installer_path = DownloadPython $python_version $platform_suffix
$installer_ext = [System.IO.Path]::GetExtension($installer_path)
Write-Host "Installing $installer_path to $python_home"
$install_log = $python_home + ".log"
if ($installer_ext -eq '.msi') {
InstallPythonMSI $installer_path $python_home $install_log
} else {
InstallPythonEXE $installer_path $python_home $install_log
}
if (Test-Path $python_home) {
Write-Host "Python $python_version ($architecture) installation complete"
} else {
Write-Host "Failed to install Python in $python_home"
Get-Content -Path $install_log
Exit 1
}
}
function InstallPythonEXE ($exepath, $python_home, $install_log) {
$install_args = "/quiet InstallAllUsers=1 TargetDir=$python_home"
RunCommand $exepath $install_args
}
function InstallPythonMSI ($msipath, $python_home, $install_log) {
$install_args = "/qn /log $install_log /i $msipath TARGETDIR=$python_home"
$uninstall_args = "/qn /x $msipath"
RunCommand "msiexec.exe" $install_args
if (-not(Test-Path $python_home)) {
Write-Host "Python seems to be installed else-where, reinstalling."
RunCommand "msiexec.exe" $uninstall_args
RunCommand "msiexec.exe" $install_args
}
}
function RunCommand ($command, $command_args) {
Write-Host $command $command_args
Start-Process -FilePath $command -ArgumentList $command_args -Wait -Passthru
}
function InstallPip ($python_home) {
$pip_path = $python_home + "\Scripts\pip.exe"
$python_path = $python_home + "\python.exe"
if (-not(Test-Path $pip_path)) {
Write-Host "Installing pip..."
$webclient = New-Object System.Net.WebClient
$webclient.DownloadFile($GET_PIP_URL, $GET_PIP_PATH)
Write-Host "Executing:" $python_path $GET_PIP_PATH
& $python_path $GET_PIP_PATH
} else {
Write-Host "pip already installed."
}
}
function DownloadMiniconda ($python_version, $platform_suffix) {
if ($python_version -eq "3.4") {
$filename = "Miniconda3-3.5.5-Windows-" + $platform_suffix + ".exe"
} else {
$filename = "Miniconda-3.5.5-Windows-" + $platform_suffix + ".exe"
}
$url = $MINICONDA_URL + $filename
$filepath = Download $filename $url
return $filepath
}
function InstallMiniconda ($python_version, $architecture, $python_home) {
Write-Host "Installing Python" $python_version "for" $architecture "bit architecture to" $python_home
if (Test-Path $python_home) {
Write-Host $python_home "already exists, skipping."
return $false
}
if ($architecture -eq "32") {
$platform_suffix = "x86"
} else {
$platform_suffix = "x86_64"
}
$filepath = DownloadMiniconda $python_version $platform_suffix
Write-Host "Installing" $filepath "to" $python_home
$install_log = $python_home + ".log"
$args = "/S /D=$python_home"
Write-Host $filepath $args
Start-Process -FilePath $filepath -ArgumentList $args -Wait -Passthru
if (Test-Path $python_home) {
Write-Host "Python $python_version ($architecture) installation complete"
} else {
Write-Host "Failed to install Python in $python_home"
Get-Content -Path $install_log
Exit 1
}
}
function InstallMinicondaPip ($python_home) {
$pip_path = $python_home + "\Scripts\pip.exe"
$conda_path = $python_home + "\Scripts\conda.exe"
if (-not(Test-Path $pip_path)) {
Write-Host "Installing pip..."
$args = "install --yes pip"
Write-Host $conda_path $args
Start-Process -FilePath "$conda_path" -ArgumentList $args -Wait -Passthru
} else {
Write-Host "pip already installed."
}
}
function main () {
InstallPython $env:PYTHON_VERSION $env:PYTHON_ARCH $env:PYTHON
InstallPip $env:PYTHON
}
main swiglpk-1.4.4/appveyor/run_with_env.cmd 0000664 0000000 0000000 00000006444 13142412132 0020242 0 ustar 00root root 0000000 0000000 :: To build extensions for 64 bit Python 3, we need to configure environment
:: variables to use the MSVC 2010 C++ compilers from GRMSDKX_EN_DVD.iso of:
:: MS Windows SDK for Windows 7 and .NET Framework 4 (SDK v7.1)
::
:: To build extensions for 64 bit Python 2, we need to configure environment
:: variables to use the MSVC 2008 C++ compilers from GRMSDKX_EN_DVD.iso of:
:: MS Windows SDK for Windows 7 and .NET Framework 3.5 (SDK v7.0)
::
:: 32 bit builds, and 64-bit builds for 3.5 and beyond, do not require specific
:: environment configurations.
::
:: Note: this script needs to be run with the /E:ON and /V:ON flags for the
:: cmd interpreter, at least for (SDK v7.0)
::
:: More details at:
:: https://github.com/cython/cython/wiki/64BitCythonExtensionsOnWindows
:: http://stackoverflow.com/a/13751649/163740
::
:: Author: Olivier Grisel
:: License: CC0 1.0 Universal: http://creativecommons.org/publicdomain/zero/1.0/
::
:: Notes about batch files for Python people:
::
:: Quotes in values are literally part of the values:
:: SET FOO="bar"
:: FOO is now five characters long: " b a r "
:: If you don't want quotes, don't include them on the right-hand side.
::
:: The CALL lines at the end of this file look redundant, but if you move them
:: outside of the IF clauses, they do not run properly in the SET_SDK_64==Y
:: case, I don't know why.
@ECHO OFF
SET COMMAND_TO_RUN=%*
SET WIN_SDK_ROOT=C:\Program Files\Microsoft SDKs\Windows
SET WIN_WDK=c:\Program Files (x86)\Windows Kits\10\Include\wdf
:: Extract the major and minor versions, and allow for the minor version to be
:: more than 9. This requires the version number to have two dots in it.
SET MAJOR_PYTHON_VERSION=%PYTHON_VERSION:~0,1%
IF "%PYTHON_VERSION:~3,1%" == "." (
SET MINOR_PYTHON_VERSION=%PYTHON_VERSION:~2,1%
) ELSE (
SET MINOR_PYTHON_VERSION=%PYTHON_VERSION:~2,2%
)
:: Based on the Python version, determine what SDK version to use, and whether
:: to set the SDK for 64-bit.
IF %MAJOR_PYTHON_VERSION% == 2 (
SET WINDOWS_SDK_VERSION="v7.0"
SET SET_SDK_64=Y
) ELSE (
IF %MAJOR_PYTHON_VERSION% == 3 (
SET WINDOWS_SDK_VERSION="v7.1"
IF %MINOR_PYTHON_VERSION% LEQ 4 (
SET SET_SDK_64=Y
) ELSE (
SET SET_SDK_64=N
IF EXIST "%WIN_WDK%" (
:: See: https://connect.microsoft.com/VisualStudio/feedback/details/1610302/
REN "%WIN_WDK%" 0wdf
)
)
) ELSE (
ECHO Unsupported Python version: "%MAJOR_PYTHON_VERSION%"
EXIT 1
)
)
IF %PYTHON_ARCH% == 64 (
IF %SET_SDK_64% == Y (
ECHO Configuring Windows SDK %WINDOWS_SDK_VERSION% for Python %MAJOR_PYTHON_VERSION% on a 64 bit architecture
SET DISTUTILS_USE_SDK=1
SET MSSdk=1
"%WIN_SDK_ROOT%\%WINDOWS_SDK_VERSION%\Setup\WindowsSdkVer.exe" -q -version:%WINDOWS_SDK_VERSION%
"%WIN_SDK_ROOT%\%WINDOWS_SDK_VERSION%\Bin\SetEnv.cmd" /x64 /release
ECHO Executing: %COMMAND_TO_RUN%
call %COMMAND_TO_RUN% || EXIT 1
) ELSE (
ECHO Using default MSVC build environment for 64 bit architecture
ECHO Executing: %COMMAND_TO_RUN%
call %COMMAND_TO_RUN% || EXIT 1
)
) ELSE (
ECHO Using default MSVC build environment for 32 bit architecture
ECHO Executing: %COMMAND_TO_RUN%
call %COMMAND_TO_RUN% || EXIT 1
) swiglpk-1.4.4/appveyor/swigwin-3.0.12.zip 0000664 0000000 0000000 00052103401 13142412132 0017776 0 ustar 00root root 0000000 0000000 PK
ð¾;J swigwin-3.0.12/UT óÝ‹XõÝ‹Xux è è PK ¾;J^kj’Å
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Ñ4‰Î·êìÉJio·6Xm:«7¶µn¹âÿÒõý–ù‚¾«|»v›¾³3¶¶it¨:·ÚÄhwûtôzÓÛtå»ÎVQß›¿ëµïÔ½éœïƒ‡€Ó‹Úîm[Û–ÎtάëƒuÝw®Ý€Ânï„¥Öב¾*n=øNTñZÕY!ˆ¾{o~صkÀškµ5ÕV׎XðÝAûµŽàoªfc—
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