debian/0000755000000000000000000000000012007670267007175 5ustar debian/copyright0000644000000000000000000000212712007670035011123 0ustar Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: circos-tools Source: http://circos.ca/distribution/circos-tools-0.16.tgz Files: * Copyright: Copyright 2004-2011 Martin Krzywinski License: GPL-2+ License: GPL-2+ This package is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. . This package is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this program. If not, see Comment: On Debian systems, the complete text of the GNU General Public License version 2 can be found in "/usr/share/common-licenses/GPL-2". Files: debian/* Copyright: 2011 Olivier Sallou License: GPL-2+ debian/rules0000755000000000000000000000107712007667411010257 0ustar #!/usr/bin/make -f %: dh $@ override_dh_install: dh_install # Update circos relative path to absolute debian paths find debian/circos-tools -type f \ | xargs sed -i \ -e 's,include etc,include /usr/share/circos/etc,g' \ -e 's,include fonts,include /usr/share/circos/fonts,g' \ -e 's,include svg,include /usr/share/circos/svg,g' \ -e 's,include tiles,include /usr/share/circos/tiles,g' \ -e 's,include data,include /var/lib/circos/data,g' \ -e 's,home/martink/bin/perl,usr/bin/perl,g' \ -e 's,bin/env,usr/bin/env,g' override_dh_builddeb: dh_builddeb -- -Z xz debian/source/0000755000000000000000000000000012007670267010475 5ustar debian/source/format0000644000000000000000000000001412007667411011700 0ustar 3.0 (quilt) debian/control0000644000000000000000000000200412007670172010567 0ustar Source: circos-tools Section: science Priority: optional Maintainer: Debian Med Packaging Team Uploaders: Olivier Sallou , DM-Upload-Allowed: yes Build-Depends: debhelper (>= 8.0.0) Standards-Version: 3.9.3 Homepage: http://circos.ca/ Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/circos-tools/trunk/ Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/circos-tools/ Package: circos-tools Architecture: all Pre-Depends: dpkg (>= 1.15.6) Depends: ${misc:Depends}, ${perl:Depends}, circos Description: plotter for visualizing data - helper utilities Circos visualizes data in a circular layout — ideal for exploring relationships between objects or positions, and creating highly informative publication-quality graphics. . This package provides a set of tools to help process your data: binlinks, bundlelinks, categoryviewer, colorinterpolate, filterlinks, maketutorialimages, orderchr, randomlinks, resample, and tableviewer. debian/changelog0000644000000000000000000000112112007667777011056 0ustar circos-tools (0.16-3) unstable; urgency=low [ Olivier Sallou ] * Update description to match circos package description * Switch to Standards 3.9.3 -- Olivier Sallou Mon, 06 Aug 2012 09:17:03 +0200 circos-tools (0.16-2) unstable; urgency=low * Add pre-depends on dpkg for xz compression (required for Ubuntu) -- Olivier Sallou Wed, 19 Oct 2011 14:28:07 +0200 circos-tools (0.16-1) unstable; urgency=low * First debian import (Closes: #632174) -- Olivier Sallou Wed, 29 Jun 2011 12:04:57 +0200 debian/watch0000644000000000000000000000013112007667411010216 0ustar version=3 http://circos.ca/software/download .*/distribution/circos-tools-([-.\d]*)\.tgz debian/compat0000644000000000000000000000000212007667411010370 0ustar 8 debian/circos-tools.install0000644000000000000000000000004012007667411013174 0ustar tools/* usr/share/circos/tools/ debian/circos-tools.links0000644000000000000000000000044412007667411012656 0ustar tools/bundlelinks/doc/bundlelinks.html /usr/share/doc/circos/bundlelinks.html tools/filterlinks/doc/filterlinks.html /usr/share/doc/circos/filterlinks.html tools/orderchr/doc/orderchr.html /usr/share/doc/circos/orderchr.html tools/tableviewer/README /usr/share/doc/circos/README.tableviewer